pycom03g21700
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
21952520 .. 21955861
3342 bp
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UTR
Exon/CDS
Intron
pycom03g21700.3

Sequence Viewer

Length: 1422 bp
ATGGGCATTAAGGAGGATGTGGAGAGTGATGTGCAGGAGGGAGTAAGAGTGCCACTCATGGCGGAAGGAGACGAAGCAGCTGGTGGAAGCGGCGGAGGGAATCTATGGATGGTTTATCTCAGCACATTTGTTGCAGTTTGTGGCTCTTATGAGTTCGGATGCTGTGTCGGTTATTCTTCGCCTACTCAGTCTGCAATCCGGGAAGATCTCAGTTTATCATTATCAGAGTATTCAGTGTTTGGCTCCATTTTGACATTTGGTGCAATGATAGGAGCTATCACTATTGGGCCAATCACCGATTTTCTTGGCCGAAAAGGGGCCTTGAGAGTGTCTTGTGCTTTCTGTGTTGCAGGTTGGCTTGCTATTTACTTCTCCAAGGGCGCTTGGTTGTTGGACATTGGGAGACTGCTAACAGGGTATGGAATGGGAGCCTTTTCTTACGTGGTACCCATTTTCGTAGCTGAAATTGCACCCAAAAACCTTCGAGGAAGATTGACTGCTGCAAATCAGTTAATGATCGTAACTGGAGTGTCTGTTTCCTTCATAATCGGGGTAGTAGTAAGTTGGCGGACATTAGCATTAATTGGACTTATTCCCTGCGCCATGACAATTTTTGGTCTCTTTTTCATTCCCGAGTCTCCAAGATGGTTGGCAAAGACAGGACGCCAGAGAGATTTTGAAGCCGCACTACAGAAACTGCGTGGAAAAGATGCTGACATATCTCATGAAGCAGCAGAAATCCAGGATTATATTGTAACTCTCGACTCGCTCCCTAAAGCCAAATTGCTGGATTTGTTTCAAAGTAGATACTGGCGCTCACTCATTATCGGAATTGGGCTGATGGTCTGTCAACAACTGGGTGGAATCAACGGAGTCTGTTTCTATGTCAGCGATATTTTTGAACAAGCAGGATTTTCCTCCAGCATTGGAACTATAATCTATGCTATTCTTCAGGTTATAGTTACCGGCATTGCTGCGGGCGTGATGGATAAAGCCGGACGAAAGCCTCTAATTTTGGTCTCTGCATCCGGGTTGGTGCTTGGCTCTCTCCTGACAGCGGTTTCATTCTTTCTGAAGGTTCATGAATTAGCACTCGACGCAGTTCCCATACTTGCTGTAACCGGCATACTGGTCTACATAGGAGCCTTTTCGATAGGAATGGGAGCAGTTCCTTGGGTTGTGATGTCTGAGATATTCCCGATTAATATTAAAGGGCAGGCCGGAAGCTTAGCAACGCTAGTGAATTGGTTCAGTGCATGGTTGTGTTCCTACACGTTCAACTATCTTATGAGTTGGAGCTCCTACGGTACTTTCATTCTGTACGCCGGAATCAACGCTCTTGCTATTTTGTTCGTGGTGTCGTTGGTGCCCGAAACAAAGGGGAAAACACTGGAACAGATCCAAGGAGCCATGAACAAATAG

Protein Analysis

474

Amino Acids

50.66

Weight (kDa)

5.85

Isoelectric Point (pI)

31.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 341
Acc65I GGTACC 1 cut(s) 445
AccB1I GGYRCC 2 cut(s) 445, 1366
AccI GTMKAC 1 cut(s) 1134
AciI CCGC 7 cut(s) 62, 90, 93, 568, 684, 977, 1058
AclWI GGATC 1 cut(s) 1393
AcoI YGGCCR 1 cut(s) 307
AcuI CTGAAG 2 cut(s) 935, 1094
AcyI GRCGYC 1 cut(s) 664
AfaI GTAC 3 cut(s) 447, 1309, 1322
AfiI CCNNNNNNNGG 2 cut(s) 316, 1057
AflIII ACRYGT 1 cut(s) 1272
AgsI TTSAA 4 cut(s) 680, 800, 902, 1279
AjnI CCWGG 1 cut(s) 741
AluBI AGCT 5 cut(s) 80, 275, 461, 1227, 1299
AluI AGCT 5 cut(s) 80, 275, 461, 1227, 1299
Alw21I GWGCWC 1 cut(s) 1301
Alw26I GTCTC 5 cut(s) 63, 397, 623, 642, 1024
AlwI GGATC 1 cut(s) 1393
AlwNI CAGNNNCTG 1 cut(s) 697
Ama87I CYCGRG 1 cut(s) 632
AoxI GGCC 4 cut(s) 287, 307, 318, 1218
ApeKI GCWGC 4 cut(s) 77, 500, 731, 974
AseI ATTAAT 2 cut(s) 581, 1203
Asp700I GAANNNNTTC 1 cut(s) 1247
Asp718I GGTACC 1 cut(s) 445
AspLEI GCGC 3 cut(s) 383, 602, 816
AspS9I GGNCC 2 cut(s) 287, 318
AsuC2I CCSGG 2 cut(s) 200, 1030
AsuHPI GGTGA 1 cut(s) 286
AvaI CYCGRG 1 cut(s) 632
BaeGI GKGCMC 1 cut(s) 1371
BanI GGYRCC 2 cut(s) 445, 1366
BanII GRGCYC 1 cut(s) 1301
BarI GAAGNNNNNNTAC 2 cut(s) 672, 704
Bbv12I GWGCWC 1 cut(s) 1301
BbvI GCAGC 4 cut(s) 89, 487, 743, 961
BccI CCATC 4 cut(s) 103, 639, 835, 979
BciT130I CCWGG 1 cut(s) 743
BcnI CCSGG 2 cut(s) 200, 1030
BcoDI GTCTC 5 cut(s) 63, 397, 623, 642, 1024
BfaI CTAG 1 cut(s) 1238
BfmI CTRYAG 1 cut(s) 689
BfoI RGCGCY 2 cut(s) 384, 817
BfuAI ACCTGC 1 cut(s) 341
BglII AGATCT 1 cut(s) 205
BisI GCNGC 6 cut(s) 78, 91, 501, 684, 732, 975
BlpI GCTNAGC 1 cut(s) 1228
BlsI GCNGC 6 cut(s) 79, 92, 502, 685, 733, 976
Bme1390I CCNGG 3 cut(s) 200, 743, 1030
BmeT110I CYCGRG 1 cut(s) 632
BmgT120I GGNCC 2 cut(s) 287, 318
BmiI GGNNCC 7 cut(s) 244, 319, 430, 447, 1144, 1368, 1408
BmrFI CCNGG 3 cut(s) 200, 743, 1030
BmrI ACTGGG 1 cut(s) 866
BmsI GCATC 3 cut(s) 149, 700, 1034
BmuI ACTGGG 1 cut(s) 866
BplI GAGNNNNNCTC 2 cut(s) 39, 71
BpmI CTGGAG 2 cut(s) 546, 904
Bpu1102I GCTNAGC 1 cut(s) 1228
BpuEI CTTGAG 1 cut(s) 343
BpuMI CCSGG 2 cut(s) 200, 1030
BsaAI YACGTR 1 cut(s) 442
BsaHI GRCGYC 1 cut(s) 664
BsaI GGTCTC 2 cut(s) 623, 1024
BsaJI CCNNGG 3 cut(s) 375, 1172, 1402
BsaXI ACNNNNNCTCC 4 cut(s) 33, 63, 519, 549
Bsc4I CCNNNNNNNGG 2 cut(s) 316, 1057
Bse118I RCCGGY 2 cut(s) 965, 1121
Bse1I ACTGG 5 cut(s) 529, 815, 861, 1134, 1395
Bse3DI GCAATG 2 cut(s) 270, 969
BseBI CCWGG 1 cut(s) 743
BseDI CCNNGG 3 cut(s) 375, 1172, 1402
BseGI GGATG 4 cut(s) 22, 114, 164, 1025
BseLI CCNNNNNNNGG 2 cut(s) 316, 1057
BseMI GCAATG 2 cut(s) 270, 969
BseMII CTCAG 4 cut(s) 133, 200, 223, 1179
BseNI ACTGG 5 cut(s) 529, 815, 861, 1134, 1395
BseSI GKGCMC 1 cut(s) 1371
BseXI GCAGC 4 cut(s) 89, 487, 743, 961
BsgI GTGCAG 1 cut(s) 53
BshFI GGCC 4 cut(s) 289, 309, 320, 1220
BshNI GGYRCC 2 cut(s) 445, 1366
BsiHKAI GWGCWC 1 cut(s) 1301
BsiHKCI CYCGRG 1 cut(s) 632
BsiSI CCGG 7 cut(s) 199, 966, 996, 1029, 1122, 1221, 1326
BslI CCNNNNNNNGG 2 cut(s) 316, 1057
BsmAI GTCTC 5 cut(s) 63, 397, 623, 642, 1024
BsmBI CGTCTC 1 cut(s) 63
BsnI GGCC 4 cut(s) 289, 309, 320, 1220
Bso31I GGTCTC 2 cut(s) 623, 1024
BsoBI CYCGRG 1 cut(s) 632
Bsp1286I GDGCHC 2 cut(s) 1301, 1371
Bsp143I GATC 3 cut(s) 205, 516, 1398
Bsp1720I GCTNAGC 1 cut(s) 1228
BspACI CCGC 7 cut(s) 62, 90, 93, 568, 684, 977, 1058
BspANI GGCC 4 cut(s) 289, 309, 320, 1220
BspCNI CTCAG 4 cut(s) 132, 199, 222, 1180
BspHI TCATGA 2 cut(s) 724, 1081
BspLI GGNNCC 7 cut(s) 244, 319, 430, 447, 1144, 1368, 1408
BspMI ACCTGC 1 cut(s) 341
BspPI GGATC 1 cut(s) 1393
BspT107I GGYRCC 2 cut(s) 445, 1366
BspTNI GGTCTC 2 cut(s) 623, 1024
BsrDI GCAATG 2 cut(s) 270, 969
BsrFI RCCGGY 2 cut(s) 965, 1121
BsrI ACTGG 5 cut(s) 529, 815, 861, 1134, 1395
BssAI RCCGGY 2 cut(s) 965, 1121
BssECI CCNNGG 3 cut(s) 375, 1172, 1402
BssMI GATC 3 cut(s) 205, 516, 1398
BssNI GRCGYC 1 cut(s) 664
BssT1I CCWWGG 3 cut(s) 375, 1172, 1402
Bst2UI CCWGG 1 cut(s) 743
Bst4CI ACNGT 1 cut(s) 1307
BstACI GRCGYC 1 cut(s) 664
BstBAI YACGTR 1 cut(s) 442
BstC8I GCNNGC 3 cut(s) 360, 979, 1218
BstDEI CTNAG 5 cut(s) 119, 186, 209, 1188, 1228
BstF5I GGATG 4 cut(s) 22, 114, 164, 1025
BstH2I RGCGCY 2 cut(s) 384, 817
BstHHI GCGC 3 cut(s) 383, 602, 816
BstKTI GATC 3 cut(s) 208, 519, 1401
BstMAI GTCTC 5 cut(s) 63, 397, 623, 642, 1024
BstMBI GATC 3 cut(s) 205, 516, 1398
BstMWI GCNNNNNNNGC 2 cut(s) 467, 1097
BstNI CCWGG 1 cut(s) 743
BstSCI CCNGG 3 cut(s) 198, 741, 1028
BstSFI CTRYAG 1 cut(s) 689
BstSLI GKGCMC 1 cut(s) 1371
BstV1I GCAGC 4 cut(s) 89, 487, 743, 961
BstX2I RGATCY 2 cut(s) 205, 1398
BstXI CCANNNNNNTGG 1 cut(s) 787
BstYI RGATCY 2 cut(s) 205, 1398
BsuRI GGCC 4 cut(s) 289, 309, 320, 1220
BtsCI GGATG 4 cut(s) 22, 114, 164, 1025
BtsIMutI CAGTG 3 cut(s) 240, 1258, 1388
BveI ACCTGC 1 cut(s) 341
Cac8I GCNNGC 3 cut(s) 360, 979, 1218
CaiI CAGNNNCTG 1 cut(s) 697
CciI TCATGA 2 cut(s) 724, 1081
CfoI GCGC 3 cut(s) 383, 602, 816
Cfr10I RCCGGY 2 cut(s) 965, 1121
Cfr13I GGNCC 2 cut(s) 287, 318
CseI GACGC 2 cut(s) 672, 1106
Csp6I GTAC 3 cut(s) 446, 1308, 1321
CviAII CATG 6 cut(s) 58, 604, 725, 1082, 1257, 1411
CviQI GTAC 3 cut(s) 446, 1308, 1321
DdeI CTNAG 5 cut(s) 119, 186, 209, 1188, 1228
DpnI GATC 3 cut(s) 207, 518, 1400
DpnII GATC 3 cut(s) 205, 516, 1398
EaeI YGGCCR 1 cut(s) 307
EciI GGCGGA 3 cut(s) 77, 108, 583
Ecl136II GAGCTC 1 cut(s) 1299
Eco130I CCWWGG 3 cut(s) 375, 1172, 1402
Eco24I GRGCYC 1 cut(s) 1301
Eco31I GGTCTC 2 cut(s) 623, 1024
Eco53kI GAGCTC 1 cut(s) 1299
Eco57I CTGAAG 2 cut(s) 935, 1094
Eco88I CYCGRG 1 cut(s) 632
EcoICRI GAGCTC 1 cut(s) 1299
EcoO109I RGGNCCY 1 cut(s) 318
EcoRII CCWGG 1 cut(s) 741
EcoT14I CCWWGG 3 cut(s) 375, 1172, 1402
EcoT38I GRGCYC 1 cut(s) 1301
ErhI CCWWGG 3 cut(s) 375, 1172, 1402
Esp3I CGTCTC 1 cut(s) 63
FaeI CATG 6 cut(s) 61, 607, 728, 1085, 1260, 1414
FatI CATG 6 cut(s) 57, 603, 724, 1081, 1256, 1410
FauI CCCGC 1 cut(s) 970
FblI GTMKAC 1 cut(s) 1134
Fnu4HI GCNGC 6 cut(s) 78, 91, 501, 684, 732, 975
FokI GGATG 4 cut(s) 29, 121, 171, 1012
FriOI GRGCYC 1 cut(s) 1301
Fsp4HI GCNGC 6 cut(s) 78, 91, 501, 684, 732, 975
FspBI CTAG 1 cut(s) 1238
GlaI GCGC 3 cut(s) 382, 601, 815
GluI GCNGC 6 cut(s) 78, 91, 501, 684, 732, 975
GsuI CTGGAG 2 cut(s) 546, 904
HaeII RGCGCY 2 cut(s) 384, 817
HaeIII GGCC 4 cut(s) 289, 309, 320, 1220
HapII CCGG 7 cut(s) 199, 966, 996, 1029, 1122, 1221, 1326
HgaI GACGC 2 cut(s) 672, 1106
HhaI GCGC 3 cut(s) 383, 602, 816
Hin1I GRCGYC 1 cut(s) 664
Hin1II CATG 6 cut(s) 61, 607, 728, 1085, 1260, 1414
Hin6I GCGC 3 cut(s) 381, 600, 814
HinP1I GCGC 3 cut(s) 381, 600, 814
HincII GTYRAC 1 cut(s) 851
HindII GTYRAC 1 cut(s) 851
HindIII AAGCTT 1 cut(s) 1225
HinfI GANTC 6 cut(s) 100, 635, 764, 864, 873, 1329
HpaII CCGG 7 cut(s) 199, 966, 996, 1029, 1122, 1221, 1326
HphI GGTGA 1 cut(s) 286
Hpy166II GTNNAC 2 cut(s) 851, 1135
Hpy188I TCNGA 5 cut(s) 158, 226, 830, 1074, 1189
Hpy188III TCNNGA 6 cut(s) 632, 725, 761, 1051, 1082, 1198
Hpy8I GTNNAC 2 cut(s) 851, 1135
Hpy99I CGWCG 1 cut(s) 1100
HpyAV CCTTC 4 cut(s) 59, 491, 550, 1069
HpyCH4III ACNGT 1 cut(s) 1307
HpyCH4IV ACGT 2 cut(s) 441, 1274
HpyCH4V TGCA 9 cut(s) 34, 134, 194, 263, 350, 470, 503, 1025, 1256
HpyF10VI GCNNNNNNNGC 2 cut(s) 467, 1097
HpyF3I CTNAG 5 cut(s) 119, 186, 209, 1188, 1228
HpySE526I ACGT 2 cut(s) 441, 1274
Hsp92I GRCGYC 1 cut(s) 664
Hsp92II CATG 6 cut(s) 61, 607, 728, 1085, 1260, 1414
HspAI GCGC 3 cut(s) 381, 600, 814
KpnI GGTACC 1 cut(s) 449
Kzo9I GATC 3 cut(s) 205, 516, 1398
LmnI GCTCC 9 cut(s) 248, 272, 428, 774, 1142, 1163, 1296, 1304, 1406
Lsp1109I GCAGC 4 cut(s) 89, 487, 743, 961
LweI GCATC 3 cut(s) 149, 700, 1034
MaeI CTAG 1 cut(s) 1238
MaeII ACGT 2 cut(s) 441, 1274
MaeIII GTNAC 4 cut(s) 520, 754, 961, 1117
MalI GATC 3 cut(s) 207, 518, 1400
MboI GATC 3 cut(s) 205, 516, 1398
MboII GAAGA 4 cut(s) 168, 215, 501, 941
MflI RGATCY 2 cut(s) 205, 1398
MhlI GDGCHC 2 cut(s) 1301, 1371
MluCI AATT 8 cut(s) 465, 582, 609, 782, 831, 1011, 1085, 1243
MlyI GAGTC 3 cut(s) 644, 758, 882
MmeI TCCRAC 2 cut(s) 372, 1274
MnlI CCTC 6 cut(s) 7, 31, 89, 479, 928, 1017
MroXI GAANNNNTTC 1 cut(s) 1247
MseI TTAA 5 cut(s) 9, 512, 581, 1203, 1209
MslI CAYNNNNRTG 1 cut(s) 1261
MspA1I CMGCKG 2 cut(s) 80, 1058
MspI CCGG 7 cut(s) 199, 966, 996, 1029, 1122, 1221, 1326
MspR9I CCNGG 3 cut(s) 200, 743, 1030
MvaI CCWGG 1 cut(s) 743
MwoI GCNNNNNNNGC 2 cut(s) 467, 1097
NciI CCSGG 2 cut(s) 200, 1030
NdeII GATC 3 cut(s) 205, 516, 1398
NlaIII CATG 6 cut(s) 61, 607, 728, 1085, 1260, 1414
NlaIV GGNNCC 7 cut(s) 244, 319, 430, 447, 1144, 1368, 1408
PagI TCATGA 2 cut(s) 724, 1081
PdmI GAANNNNTTC 1 cut(s) 1247
PfeI GAWTC 3 cut(s) 100, 864, 1329
PfoI TCCNGGA 2 cut(s) 198, 741
PkrI GCNGC 6 cut(s) 79, 92, 502, 685, 733, 976
PleI GAGTC 3 cut(s) 643, 758, 881
PpsI GAGTC 3 cut(s) 643, 758, 881
Ppu21I YACGTR 1 cut(s) 442
PshBI ATTAAT 2 cut(s) 581, 1203
Psp124BI GAGCTC 1 cut(s) 1301
Psp6I CCWGG 1 cut(s) 741
PspGI CCWGG 1 cut(s) 741
PspN4I GGNNCC 7 cut(s) 244, 319, 430, 447, 1144, 1368, 1408
PspPI GGNCC 2 cut(s) 287, 318
PstNI CAGNNNCTG 1 cut(s) 697
PsuI RGATCY 2 cut(s) 205, 1398
PvuII CAGCTG 1 cut(s) 80
RsaI GTAC 3 cut(s) 447, 1309, 1322
RsaNI GTAC 3 cut(s) 446, 1308, 1321
RseI CAYNNNNRTG 1 cut(s) 1261
SacI GAGCTC 1 cut(s) 1301
SaqAI TTAA 5 cut(s) 9, 512, 581, 1203, 1209
SatI GCNGC 6 cut(s) 78, 91, 501, 684, 732, 975
Sau3AI GATC 3 cut(s) 205, 516, 1398
Sau96I GGNCC 2 cut(s) 287, 318
SchI GAGTC 3 cut(s) 644, 758, 882
ScrFI CCNGG 3 cut(s) 200, 743, 1030
SduI GDGCHC 2 cut(s) 1301, 1371
SfaNI GCATC 3 cut(s) 149, 700, 1034
SfcI CTRYAG 1 cut(s) 689
SmiMI CAYNNNNRTG 1 cut(s) 1261
SmlI CTYRAG 1 cut(s) 322
SmoI CTYRAG 1 cut(s) 322
Sse9I AATT 8 cut(s) 465, 582, 609, 782, 831, 1011, 1085, 1243
SsiI CCGC 7 cut(s) 62, 90, 93, 568, 684, 977, 1058
SspI AATATT 1 cut(s) 1207
SspMI CTAG 1 cut(s) 1238
SstI GAGCTC 1 cut(s) 1301
StyD4I CCNGG 3 cut(s) 198, 741, 1028
StyI CCWWGG 3 cut(s) 375, 1172, 1402
TaaI ACNGT 1 cut(s) 1307
TaiI ACGT 2 cut(s) 444, 1277
TaqI TCGA 4 cut(s) 484, 762, 1095, 1151
TasI AATT 8 cut(s) 465, 582, 609, 782, 831, 1011, 1085, 1243
TauI GCSGC 2 cut(s) 93, 686
TfiI GAWTC 3 cut(s) 100, 864, 1329
Tru1I TTAA 5 cut(s) 9, 512, 581, 1203, 1209
Tru9I TTAA 5 cut(s) 9, 512, 581, 1203, 1209
TscAI CASTG 3 cut(s) 240, 1258, 1395
TseI GCWGC 4 cut(s) 77, 500, 731, 974
TspDTI ATGAA 7 cut(s) 532, 616, 741, 1053, 1070, 1098, 1303
TspGWI ACGGA 1 cut(s) 885
TspRI CASTG 3 cut(s) 240, 1258, 1395
VspI ATTAAT 2 cut(s) 581, 1203
XmiI GTMKAC 1 cut(s) 1134
XmnI GAANNNNTTC 1 cut(s) 1247
XspI CTAG 1 cut(s) 1238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.