MD11G1293300.v1.1
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
41264834 .. 41268569
3736 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1293300.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGGCCATCAAAGAGAATGTAGAGAGGGATGTGCAGAAGGAGGAAGTAAGAGAGCCACTCATGAGGGTGGTGGAGAATAAAATGGACGGTGAAGATGGAAGCAGCAGAGGGGATCAATGGATGGTTTATCTCAGCACATTTGTTGCAGTTTGTGGCTCTTTTGAATTTGGATCCTGTGTTGGTTATTCATCGCCGACTCAATCTGCCATCAGGGAAGATCTCGGTTTAACATTAGCAGAGTTTTCAGTGTTTGGATCCATATTGACATTCGGCGCAATGATAGGTGCTATCACAATTGGTCCCATAACTGATTTTCTAGGCCGGAAAGGGGCATTGCGAGTTTCCTGTGCTTTCTGTGTTGTAGGTTGGCTCGCTATTTACTTCTCGAAGGGAGTTTTGTCTCTGGACATTGGGAGACTGGCAAGTGGATATGGAATGGGAGCCTTTTCATACGTGGTACCTGTTTTCGTAGCTGAAATCGCACCCAAACATCTTCGAGGAAGACTAACTGCTGTAAATCAGTTAATGATCTGCATTGGAGGGTCCATGTCGTTCATTTTTGGGGTAGTAGTAAGTTGGAGGGATTTAGCATTAATCGGAATTGTTCCATGTGCTGTGACCATTCTCGGTCTCTTTTTCATTCCTGAGTCTCCAAGATGGTTGGCAAAGACAGGACACCAGAAAGATTTCGAAGTTGCGCTGCAGAAACTTCGTGGTAAAGATGCTGACATCTCTCACGAAGCAGCAGAAATCCAGGATTATATAGCAACTCTTGAACGGCTCCCAAAAGCTAAATTACTGGATTTTTTTCAAAAGAGATACTTGCGCTCAATCATTATTGCGGTTGGGCTGATGGTCTGTCAACAATTGGGGGGAATTAACGGGGTCTGTTTCTACACCAGCAATATTTTTAAGCAAGCAGGATTTTCGCCTAGTGTTGGAACCATATCCTTTGCTATCCTTCAGGTTGTGGTTACAGGCATTGGTGCATCTGTGATGGATAAAGCCGGAAGAAAGCCTCTAATTCTGATTTCTGCATCAGGCTTGGTACTCGGATGCCTCCTGACTGCCATTTCATTCTTTCTGAAGGTTCATGACTTGGCACACAAGGCATCTCCCATACTTGCTGTAACTGGCATTCTGGTCTATATAGGATCCTTTGCGATAGGAATGGGAGCAGTTCCTTGGGTCATTATGTCTGAGATATTCCCTATAAATATCAAAGGGCAGGCTGGGAGCTTAGCGACATTGGTGAACTGGTTCGTTGCATGGTTGTGTTCCTACACTTTCAACTATCTTATGAGTTGGAGCTCCTACGGTACCTTCATTCTGTATGCAGCAATCAACGCTCTGGCCATAGTGTTTGTGGTTTCGATGGTACCTGAAACGAAGGGGAAAACCCTAGAACAAATCCAAGGAGCCATTAACTAG

Protein Analysis

477

Amino Acids

51.47

Weight (kDa)

8.44

Isoelectric Point (pI)

34.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 61 - 420 6.8e-27 Major Facilitator Superfamily
Sugar_tr PF00083 79 - 472 9.8e-92 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 3 cut(s) 457, 1319, 1378
AccB1I GGYRCC 3 cut(s) 457, 1319, 1378
AciI CCGC 1 cut(s) 842
AclWI GGATC 7 cut(s) 120, 165, 178, 249, 262, 1149, 1162
AcoI YGGCCR 2 cut(s) 3, 1353
AcsI RAATTY 1 cut(s) 164
AcuI CTGAAG 2 cut(s) 947, 1106
AfaI GTAC 4 cut(s) 459, 1050, 1321, 1380
AfiI CCNNNNNNNGG 2 cut(s) 328, 938
AgsI TTSAA 4 cut(s) 164, 776, 812, 1291
AjnI CCWGG 1 cut(s) 753
AluBI AGCT 4 cut(s) 473, 791, 1239, 1311
AluI AGCT 4 cut(s) 473, 791, 1239, 1311
Alw21I GWGCWC 1 cut(s) 1313
Alw26I GTCTC 4 cut(s) 405, 409, 635, 654
AlwI GGATC 7 cut(s) 120, 165, 178, 249, 262, 1149, 1162
AoxI GGCC 3 cut(s) 3, 319, 1353
ApeKI GCWGC 4 cut(s) 102, 700, 743, 1337
ApoI RAATTY 1 cut(s) 164
AseI ATTAAT 1 cut(s) 593
Asp700I GAANNNNTTC 2 cut(s) 686, 1259
Asp718I GGTACC 3 cut(s) 457, 1319, 1378
AspLEI GCGC 3 cut(s) 275, 700, 828
AspS9I GGNCC 2 cut(s) 299, 543
AsuHPI GGTGA 2 cut(s) 101, 1264
AsuII TTCGAA 1 cut(s) 690
AvaII GGWCC 2 cut(s) 299, 543
BalI TGGCCA 2 cut(s) 5, 1355
BamHI GGATCC 3 cut(s) 170, 254, 1154
BanI GGYRCC 3 cut(s) 457, 1319, 1378
BanII GRGCYC 1 cut(s) 1313
BbsI GAAGAC 1 cut(s) 508
Bbv12I GWGCWC 1 cut(s) 1313
BbvI GCAGC 4 cut(s) 114, 687, 755, 1349
BccI CCATC 8 cut(s) 14, 89, 115, 215, 651, 847, 991, 1369
BceAI ACGGC 1 cut(s) 794
BcgI CGANNNNNNTGC 4 cut(s) 692, 726, 909, 943
BciT130I CCWGG 1 cut(s) 755
BcoDI GTCTC 4 cut(s) 405, 409, 635, 654
BfaI CTAG 4 cut(s) 317, 933, 1403, 1429
BfmI CTRYAG 1 cut(s) 701
BglII AGATCT 1 cut(s) 217
BisI GCNGC 4 cut(s) 103, 701, 744, 1338
BlpI GCTNAGC 1 cut(s) 1240
BlsI GCNGC 4 cut(s) 104, 702, 745, 1339
Bme1390I CCNGG 1 cut(s) 755
Bme18I GGWCC 2 cut(s) 299, 543
BmgT120I GGNCC 2 cut(s) 299, 543
BmrFI CCNGG 1 cut(s) 755
BmsI GCATC 5 cut(s) 712, 998, 1046, 1046, 1121
BpiI GAAGAC 1 cut(s) 508
BplI GAGNNNNNCTC 2 cut(s) 42, 74
Bpu1102I GCTNAGC 1 cut(s) 1240
Bpu14I TTCGAA 1 cut(s) 690
BsaAI YACGTR 1 cut(s) 454
BsaI GGTCTC 1 cut(s) 635
BsaJI CCNNGG 2 cut(s) 1184, 1414
Bsc4I CCNNNNNNNGG 2 cut(s) 328, 938
Bse1I ACTGG 4 cut(s) 423, 804, 1138, 1262
Bse3DI GCAATG 2 cut(s) 282, 332
BseBI CCWGG 1 cut(s) 755
BseDI CCNNGG 2 cut(s) 1184, 1414
BseGI GGATG 3 cut(s) 34, 126, 1061
BseLI CCNNNNNNNGG 2 cut(s) 328, 938
BseMI GCAATG 2 cut(s) 282, 332
BseMII CTCAG 3 cut(s) 145, 636, 1191
BseNI ACTGG 4 cut(s) 423, 804, 1138, 1262
BseXI GCAGC 4 cut(s) 114, 687, 755, 1349
BseYI CCCAGC 1 cut(s) 1232
BsgI GTGCAG 1 cut(s) 53
BshFI GGCC 3 cut(s) 5, 321, 1355
BshNI GGYRCC 3 cut(s) 457, 1319, 1378
BsiHKAI GWGCWC 1 cut(s) 1313
BsiSI CCGG 2 cut(s) 322, 1008
BslFI GGGAC 1 cut(s) 285
BslI CCNNNNNNNGG 2 cut(s) 328, 938
BsmAI GTCTC 4 cut(s) 405, 409, 635, 654
BsmFI GGGAC 1 cut(s) 285
BsmI GAATGC 1 cut(s) 1137
BsnI GGCC 3 cut(s) 5, 321, 1355
Bso31I GGTCTC 1 cut(s) 635
Bsp119I TTCGAA 1 cut(s) 690
Bsp1286I GDGCHC 1 cut(s) 1313
Bsp143I GATC 6 cut(s) 112, 170, 217, 254, 528, 1154
Bsp1720I GCTNAGC 1 cut(s) 1240
BspACI CCGC 1 cut(s) 842
BspANI GGCC 3 cut(s) 5, 321, 1355
BspCNI CTCAG 3 cut(s) 144, 637, 1192
BspHI TCATGA 2 cut(s) 60, 1093
BspMAI CTGCAG 1 cut(s) 705
BspPI GGATC 7 cut(s) 120, 165, 178, 249, 262, 1149, 1162
BspT104I TTCGAA 1 cut(s) 690
BspT107I GGYRCC 3 cut(s) 457, 1319, 1378
BspTNI GGTCTC 1 cut(s) 635
BsrDI GCAATG 2 cut(s) 282, 332
BsrI ACTGG 4 cut(s) 423, 804, 1138, 1262
BssECI CCNNGG 2 cut(s) 1184, 1414
BssMI GATC 6 cut(s) 112, 170, 217, 254, 528, 1154
BssT1I CCWWGG 2 cut(s) 1184, 1414
Bst2UI CCWGG 1 cut(s) 755
Bst4CI ACNGT 2 cut(s) 89, 1319
BstBAI YACGTR 1 cut(s) 454
BstBI TTCGAA 1 cut(s) 690
BstC8I GCNNGC 3 cut(s) 372, 918, 1230
BstDEI CTNAG 4 cut(s) 131, 645, 1200, 1240
BstF5I GGATG 3 cut(s) 34, 126, 1061
BstHHI GCGC 3 cut(s) 275, 700, 828
BstKTI GATC 6 cut(s) 115, 173, 220, 257, 531, 1157
BstMAI GTCTC 4 cut(s) 405, 409, 635, 654
BstMBI GATC 6 cut(s) 112, 170, 217, 254, 528, 1154
BstMWI GCNNNNNNNGC 3 cut(s) 479, 1109, 1346
BstNI CCWGG 1 cut(s) 755
BstSCI CCNGG 1 cut(s) 753
BstSFI CTRYAG 1 cut(s) 701
BstV1I GCAGC 4 cut(s) 114, 687, 755, 1349
BstV2I GAAGAC 1 cut(s) 508
BstX2I RGATCY 4 cut(s) 170, 217, 254, 1154
BstYI RGATCY 4 cut(s) 170, 217, 254, 1154
BsuRI GGCC 3 cut(s) 5, 321, 1355
BtgZI GCGATG 1 cut(s) 174
BtsCI GGATG 3 cut(s) 34, 126, 1061
BtsIMutI CAGTG 1 cut(s) 252
Cac8I GCNNGC 3 cut(s) 372, 918, 1230
CciI TCATGA 2 cut(s) 60, 1093
CfoI GCGC 3 cut(s) 275, 700, 828
Cfr13I GGNCC 2 cut(s) 299, 543
Csp6I GTAC 4 cut(s) 458, 1049, 1320, 1379
CviAII CATG 5 cut(s) 61, 547, 609, 1094, 1269
CviQI GTAC 4 cut(s) 458, 1049, 1320, 1379
DdeI CTNAG 4 cut(s) 131, 645, 1200, 1240
DpnI GATC 5 cut(s) 114, 172, 219, 256, 530
DpnII GATC 6 cut(s) 112, 170, 217, 254, 528, 1154
EaeI YGGCCR 2 cut(s) 3, 1353
Ecl136II GAGCTC 1 cut(s) 1311
Eco130I CCWWGG 2 cut(s) 1184, 1414
Eco24I GRGCYC 1 cut(s) 1313
Eco31I GGTCTC 1 cut(s) 635
Eco47I GGWCC 2 cut(s) 299, 543
Eco53kI GAGCTC 1 cut(s) 1311
Eco57I CTGAAG 2 cut(s) 947, 1106
EcoICRI GAGCTC 1 cut(s) 1311
EcoRII CCWGG 1 cut(s) 753
EcoT14I CCWWGG 2 cut(s) 1184, 1414
EcoT38I GRGCYC 1 cut(s) 1313
ErhI CCWWGG 2 cut(s) 1184, 1414
FaeI CATG 5 cut(s) 64, 550, 612, 1097, 1272
FalI AAGNNNNNCTT 2 cut(s) 806, 838
FaqI GGGAC 1 cut(s) 285
FatI CATG 5 cut(s) 60, 546, 608, 1093, 1268
Fnu4HI GCNGC 4 cut(s) 103, 701, 744, 1338
FokI GGATG 3 cut(s) 41, 133, 1068
FriOI GRGCYC 1 cut(s) 1313
Fsp4HI GCNGC 4 cut(s) 103, 701, 744, 1338
FspBI CTAG 4 cut(s) 317, 933, 1403, 1429
GlaI GCGC 3 cut(s) 274, 699, 827
GluI GCNGC 4 cut(s) 103, 701, 744, 1338
GsaI CCCAGC 1 cut(s) 1236
HaeIII GGCC 3 cut(s) 5, 321, 1355
HapII CCGG 2 cut(s) 322, 1008
HhaI GCGC 3 cut(s) 275, 700, 828
Hin1II CATG 5 cut(s) 64, 550, 612, 1097, 1272
Hin6I GCGC 3 cut(s) 273, 698, 826
HinP1I GCGC 3 cut(s) 273, 698, 826
HincII GTYRAC 1 cut(s) 863
HindII GTYRAC 1 cut(s) 863
HinfI GANTC 2 cut(s) 196, 647
HpaII CCGG 2 cut(s) 322, 1008
HphI GGTGA 2 cut(s) 101, 1264
Hpy166II GTNNAC 2 cut(s) 863, 1255
Hpy188I TCNGA 5 cut(s) 599, 1029, 1055, 1086, 1201
Hpy188III TCNNGA 8 cut(s) 61, 385, 404, 644, 737, 773, 1063, 1094
Hpy8I GTNNAC 2 cut(s) 863, 1255
HpyAV CCTTC 6 cut(s) 31, 382, 971, 1081, 1333, 1384
HpyCH4III ACNGT 2 cut(s) 89, 1319
HpyCH4IV ACGT 1 cut(s) 453
HpyCH4V TGCA 8 cut(s) 34, 146, 534, 703, 989, 1037, 1268, 1337
HpyF10VI GCNNNNNNNGC 3 cut(s) 479, 1109, 1346
HpyF3I CTNAG 4 cut(s) 131, 645, 1200, 1240
HpySE526I ACGT 1 cut(s) 453
Hsp92II CATG 5 cut(s) 64, 550, 612, 1097, 1272
HspAI GCGC 3 cut(s) 273, 698, 826
KpnI GGTACC 3 cut(s) 461, 1323, 1382
Kzo9I GATC 6 cut(s) 112, 170, 217, 254, 528, 1154
LmnI GCTCC 7 cut(s) 440, 786, 1175, 1236, 1308, 1316, 1418
Lsp1109I GCAGC 4 cut(s) 114, 687, 755, 1349
LweI GCATC 5 cut(s) 712, 998, 1046, 1046, 1121
MaeI CTAG 4 cut(s) 317, 933, 1403, 1429
MaeII ACGT 1 cut(s) 453
MaeIII GTNAC 3 cut(s) 616, 973, 1129
MalI GATC 6 cut(s) 114, 172, 219, 256, 530, 1156
MboI GATC 6 cut(s) 112, 170, 217, 254, 528, 1154
MboII GAAGA 5 cut(s) 104, 227, 485, 513, 1023
MfeI CAATTG 2 cut(s) 294, 866
MflI RGATCY 4 cut(s) 170, 217, 254, 1154
MhlI GDGCHC 1 cut(s) 1313
MlsI TGGCCA 2 cut(s) 5, 1355
MluCI AATT 7 cut(s) 164, 294, 600, 794, 866, 876, 1023
MluNI TGGCCA 2 cut(s) 5, 1355
MlyI GAGTC 2 cut(s) 190, 656
MmeI TCCRAC 3 cut(s) 557, 919, 1286
MnlI CCTC 9 cut(s) 18, 34, 57, 101, 491, 533, 573, 1029, 1070
Mox20I TGGCCA 2 cut(s) 5, 1355
MroXI GAANNNNTTC 2 cut(s) 686, 1259
MscI TGGCCA 2 cut(s) 5, 1355
MseI TTAA 6 cut(s) 227, 524, 593, 879, 912, 1425
MslI CAYNNNNRTG 2 cut(s) 65, 1273
Msp20I TGGCCA 2 cut(s) 5, 1355
MspI CCGG 2 cut(s) 322, 1008
MspR9I CCNGG 1 cut(s) 755
MunI CAATTG 2 cut(s) 294, 866
Mva1269I GAATGC 1 cut(s) 1137
MvaI CCWGG 1 cut(s) 755
MwoI GCNNNNNNNGC 3 cut(s) 479, 1109, 1346
NdeII GATC 6 cut(s) 112, 170, 217, 254, 528, 1154
NlaIII CATG 5 cut(s) 64, 550, 612, 1097, 1272
NmuCI GTSAC 1 cut(s) 616
NspV TTCGAA 1 cut(s) 690
PagI TCATGA 2 cut(s) 60, 1093
PctI GAATGC 1 cut(s) 1137
PdmI GAANNNNTTC 2 cut(s) 686, 1259
PfoI TCCNGGA 1 cut(s) 753
PkrI GCNGC 4 cut(s) 104, 702, 745, 1339
PleI GAGTC 2 cut(s) 190, 655
PpsI GAGTC 2 cut(s) 190, 655
Ppu21I YACGTR 1 cut(s) 454
PshBI ATTAAT 1 cut(s) 593
Psp124BI GAGCTC 1 cut(s) 1313
Psp6I CCWGG 1 cut(s) 753
PspFI CCCAGC 1 cut(s) 1232
PspGI CCWGG 1 cut(s) 753
PspPI GGNCC 2 cut(s) 299, 543
PstI CTGCAG 1 cut(s) 705
PsuI RGATCY 4 cut(s) 170, 217, 254, 1154
RsaI GTAC 4 cut(s) 459, 1050, 1321, 1380
RsaNI GTAC 4 cut(s) 458, 1049, 1320, 1379
RseI CAYNNNNRTG 2 cut(s) 65, 1273
SacI GAGCTC 1 cut(s) 1313
SaqAI TTAA 6 cut(s) 227, 524, 593, 879, 912, 1425
SatI GCNGC 4 cut(s) 103, 701, 744, 1338
Sau3AI GATC 6 cut(s) 112, 170, 217, 254, 528, 1154
Sau96I GGNCC 2 cut(s) 299, 543
SchI GAGTC 2 cut(s) 190, 656
ScrFI CCNGG 1 cut(s) 755
SduI GDGCHC 1 cut(s) 1313
SfaNI GCATC 5 cut(s) 712, 998, 1046, 1046, 1121
SfcI CTRYAG 1 cut(s) 701
SfuI TTCGAA 1 cut(s) 690
SinI GGWCC 2 cut(s) 299, 543
SmiMI CAYNNNNRTG 2 cut(s) 65, 1273
Sse9I AATT 7 cut(s) 164, 294, 600, 794, 866, 876, 1023
SsiI CCGC 1 cut(s) 842
SspI AATATT 1 cut(s) 907
SspMI CTAG 4 cut(s) 317, 933, 1403, 1429
SstI GAGCTC 1 cut(s) 1313
StyD4I CCNGG 1 cut(s) 753
StyI CCWWGG 2 cut(s) 1184, 1414
TaaI ACNGT 2 cut(s) 89, 1319
TaiI ACGT 1 cut(s) 456
TaqI TCGA 4 cut(s) 386, 496, 690, 1373
TaqII GACCGA 1 cut(s) 617
TasI AATT 7 cut(s) 164, 294, 600, 794, 866, 876, 1023
Tru1I TTAA 6 cut(s) 227, 524, 593, 879, 912, 1425
Tru9I TTAA 6 cut(s) 227, 524, 593, 879, 912, 1425
TscAI CASTG 1 cut(s) 252
TseFI GTSAC 1 cut(s) 616
TseI GCWGC 4 cut(s) 102, 700, 743, 1337
Tsp45I GTSAC 1 cut(s) 616
TspDTI ATGAA 7 cut(s) 177, 438, 544, 628, 1065, 1082, 1315
TspRI CASTG 1 cut(s) 252
VpaK11BI GGWCC 2 cut(s) 299, 543
VspI ATTAAT 1 cut(s) 593
XapI RAATTY 1 cut(s) 164
XcmI CCANNNNNNNNNTGG 1 cut(s) 1363
XmnI GAANNNNTTC 2 cut(s) 686, 1259
XspI CTAG 4 cut(s) 317, 933, 1403, 1429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.