pycom11g25940
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
28623072 .. 28626570
3499 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g25940.6

Sequence Viewer

Length: 1611 bp
ATGTGTGTGGATAGCACCACCCATATAATATTCCTGCCTTGTCAGCTTATACTTGAGTACAAGAATTATGCTTTTGCATATAAATTCACATCCATTTTGTCCAAGAAGATAAAAATTTCATGGTTTCCACTCTTTCACAGTTTCTTGCTCACACAAACCATCTGTTTGAATCATTTTCTCTTTGCCATTTATACTAGTTCATCGAGACGTTTCGAGTTTATACAATCCAGGGCAGACATGGATGGTGGAATAAGAGAACCACTCATGGCTGATGAAAGCAGAAGAGGGGATCAATGGATGGTTTATCTCAGCACACTTGTTGCTGTCTGTGGCTCTTACGAATTTGGATGCTGTGTCGGTTATTCGTCACCAACCCAGTCTGCAATTAGGGAAGATCTTAATTTAACATTAGCAGAGTATTCAGTGGTTGGCTCCATTTTGACAATTGGTGCAATGGTAGGAGCTATCACTATTGGGCCTATTGCGGATTTTCTTGGTCGAAAAGGGGCCTTGAGAATGTCTTCTGCTTTCTGTGTTGCAGGTTGGCTTGCTATTTACTTCTCTGAGGGGGTCTTGTCATTGGACATTGGGAGAATGGCAAGTGGATACGGAATGGGAGCCTTTTCGTACTTGGTACCTGTTTTCATAGCTGAAATCGCACCCAAAAATCTTCGAGGAAGACTGACTGCTGTAAATCAGTTAATGATCTGTGTTGGAAGCTCTGTTTCCTTCATAATCGGGGTAGTAGTAAGTTGGAGGGCATTAGCATTAATCGGAATTGTGCCGTGTGCTGTGTCTATTTTCGGTCTTTTTTTCATTCCCGAGTCTCCACGATGGTTGGCAAAGACTGGACGCCATAAAGATTTCGAAGCTGCACTACAGAAACTTCGTGGCAAAGACGCTGACATCTCTCACGAAGCAGCAGAAATCCAGGATTACATAGCAACTCTTGAACGACTCCCAAAAGCGAAGTTGCTGGATTTGTTTCAAACCAGATACTTGCGCTCAGTCCTTATTGGCATCGGGCTGATGGTCTGCCAACAATTAGGGGGAATTAACGGGGTTGGTTTCTATGTCAGTGATATTTTTGAGCAAGCAGGATTCTCGTCCAGCGTTGGGACTATATCCTTTGCTGTAATTCAGGTTGTGGTTACTGGTATTGGTGCATCCGTGATGGATAAAGCCGGAAGAAAGCCTCTAATTGTGCTCTCTGCATCAGGCTTGGTACTCGGATCTCTCCTGACTGCCATTTCATTCTTTCTCAAGGTTCATGACTTGGCACACAAGGCATCTCCCATACTTGCTGTAACCGGCATTCTGGTCTATATTGGATCCTTTGGGATAGGAATGGGAGCAGTTCCTTGGGTCATTATGTCTGAGATATTCCCGATAAACATTAAAGGGCAGGCCGGAAGCGTAGCAACACTGGTGAACTGGTTCGGCGCATGGTTGTGTTCCTACACTTTCAACTATCTTATGAGTTGGAGCTCCTACGGCACCTTCGTTTTGTATGCCGCAATCAATGCACTGGCCATAGCTTTCGTGGTTTCGATGGTCCCTGAAATGAAAGGGAAAACCCTGGAACAGATTCAAGGAGCCATTAACAAGTAG

Protein Analysis

537

Amino Acids

58.23

Weight (kDa)

8.74

Isoelectric Point (pI)

32.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 530
Acc65I GGTACC 1 cut(s) 634
AccB1I GGYRCC 2 cut(s) 634, 1496
AciI CCGC 2 cut(s) 485, 1515
AclWI GGATC 4 cut(s) 297, 1240, 1326, 1339
AcoI YGGCCR 1 cut(s) 1530
AcsI RAATTY 3 cut(s) 83, 114, 341
AcyI GRCGYC 1 cut(s) 853
AfaI GTAC 4 cut(s) 59, 629, 636, 1227
AfiI CCNNNNNNNGG 1 cut(s) 1116
AgsI TTSAA 5 cut(s) 169, 953, 989, 1468, 1592
AhlI ACTAGT 1 cut(s) 194
AjnI CCWGG 3 cut(s) 227, 930, 1578
AluBI AGCT 7 cut(s) 46, 464, 650, 720, 872, 1488, 1538
AluI AGCT 7 cut(s) 46, 464, 650, 720, 872, 1488, 1538
Alw21I GWGCWC 2 cut(s) 1209, 1490
Alw26I GTCTC 2 cut(s) 199, 831
AlwI GGATC 4 cut(s) 297, 1240, 1326, 1339
Ama87I CYCGRG 1 cut(s) 821
AoxI GGCC 4 cut(s) 476, 507, 1407, 1530
ApeKI GCWGC 2 cut(s) 872, 920
ApoI RAATTY 3 cut(s) 83, 114, 341
AseI ATTAAT 1 cut(s) 770
Asp700I GAANNNNTTC 3 cut(s) 520, 1436, 1587
Asp718I GGTACC 1 cut(s) 634
AspLEI GCGC 2 cut(s) 1005, 1445
AspS9I GGNCC 3 cut(s) 476, 507, 1555
AsuHPI GGTGA 2 cut(s) 360, 1441
AsuII TTCGAA 1 cut(s) 867
AvaI CYCGRG 1 cut(s) 821
AvaII GGWCC 1 cut(s) 1555
BalI TGGCCA 1 cut(s) 1532
BamHI GGATCC 1 cut(s) 1331
BanI GGYRCC 2 cut(s) 634, 1496
BanII GRGCYC 1 cut(s) 1490
BarI GAAGNNNNNNTAC 2 cut(s) 861, 893
BbsI GAAGAC 2 cut(s) 513, 685
Bbv12I GWGCWC 2 cut(s) 1209, 1490
BbvI GCAGC 2 cut(s) 859, 932
BccI CCATC 7 cut(s) 167, 236, 292, 828, 1024, 1168, 1546
BceAI ACGGC 2 cut(s) 769, 1510
BcgI CGANNNNNNTGC 2 cut(s) 1086, 1120
BciT130I CCWGG 3 cut(s) 229, 932, 1580
BciVI GTATCC 1 cut(s) 599
BcoDI GTCTC 2 cut(s) 199, 831
BcuI ACTAGT 1 cut(s) 194
BfaI CTAG 1 cut(s) 195
BfmI CTRYAG 1 cut(s) 878
BfuAI ACCTGC 1 cut(s) 530
BfuI GTATCC 1 cut(s) 599
BglII AGATCT 1 cut(s) 394
BisI GCNGC 3 cut(s) 873, 921, 1515
BlsI GCNGC 3 cut(s) 874, 922, 1516
Bme1390I CCNGG 3 cut(s) 229, 932, 1580
Bme18I GGWCC 1 cut(s) 1555
BmeT110I CYCGRG 1 cut(s) 821
BmgT120I GGNCC 3 cut(s) 476, 507, 1555
BmiI GGNNCC 8 cut(s) 433, 508, 619, 636, 1333, 1498, 1557, 1597
BmrFI CCNGG 3 cut(s) 229, 932, 1580
BmrI ACTGGG 1 cut(s) 370
BmsI GCATC 5 cut(s) 338, 1029, 1175, 1223, 1298
BmuI ACTGGG 1 cut(s) 370
BpiI GAAGAC 2 cut(s) 513, 685
BplI GAGNNNNNCTC 2 cut(s) 246, 278
Bpu14I TTCGAA 1 cut(s) 867
BpuEI CTTGAG 3 cut(s) 74, 532, 1247
BsaHI GRCGYC 1 cut(s) 853
BsaJI CCNNGG 3 cut(s) 228, 1361, 1578
Bsc4I CCNNNNNNNGG 1 cut(s) 1116
Bse118I RCCGGY 1 cut(s) 1310
Bse1I ACTGG 6 cut(s) 376, 853, 1159, 1431, 1439, 1533
Bse3DI GCAATG 1 cut(s) 459
BseBI CCWGG 3 cut(s) 229, 932, 1580
BseDI CCNNGG 3 cut(s) 228, 1361, 1578
BseGI GGATG 5 cut(s) 89, 247, 303, 353, 1166
BseLI CCNNNNNNNGG 1 cut(s) 1116
BseMI GCAATG 1 cut(s) 459
BseMII CTCAG 4 cut(s) 322, 555, 1020, 1368
BseNI ACTGG 6 cut(s) 376, 853, 1159, 1431, 1439, 1533
BseXI GCAGC 2 cut(s) 859, 932
BsgI GTGCAG 1 cut(s) 858
BshFI GGCC 4 cut(s) 478, 509, 1409, 1532
BshNI GGYRCC 2 cut(s) 634, 1496
BsiHKAI GWGCWC 2 cut(s) 1209, 1490
BsiHKCI CYCGRG 1 cut(s) 821
BsiSI CCGG 3 cut(s) 1185, 1311, 1410
BslFI GGGAC 2 cut(s) 1132, 1541
BslI CCNNNNNNNGG 1 cut(s) 1116
BsmAI GTCTC 2 cut(s) 199, 831
BsmBI CGTCTC 1 cut(s) 199
BsmFI GGGAC 2 cut(s) 1132, 1541
BsmI GAATGC 1 cut(s) 1314
BsnI GGCC 4 cut(s) 478, 509, 1409, 1532
BsoBI CYCGRG 1 cut(s) 821
Bsp119I TTCGAA 1 cut(s) 867
Bsp1286I GDGCHC 2 cut(s) 1209, 1490
Bsp143I GATC 5 cut(s) 289, 394, 705, 1232, 1331
BspACI CCGC 2 cut(s) 485, 1515
BspANI GGCC 4 cut(s) 478, 509, 1409, 1532
BspCNI CTCAG 4 cut(s) 321, 556, 1019, 1369
BspHI TCATGA 1 cut(s) 1270
BspLI GGNNCC 8 cut(s) 433, 508, 619, 636, 1333, 1498, 1557, 1597
BspMI ACCTGC 1 cut(s) 530
BspPI GGATC 4 cut(s) 297, 1240, 1326, 1339
BspT104I TTCGAA 1 cut(s) 867
BspT107I GGYRCC 2 cut(s) 634, 1496
BsrDI GCAATG 1 cut(s) 459
BsrFI RCCGGY 1 cut(s) 1310
BsrI ACTGG 6 cut(s) 376, 853, 1159, 1431, 1439, 1533
BssAI RCCGGY 1 cut(s) 1310
BssECI CCNNGG 3 cut(s) 228, 1361, 1578
BssMI GATC 5 cut(s) 289, 394, 705, 1232, 1331
BssNI GRCGYC 1 cut(s) 853
BssT1I CCWWGG 1 cut(s) 1361
Bst2UI CCWGG 3 cut(s) 229, 932, 1580
Bst4CI ACNGT 1 cut(s) 140
Bst6I CTCTTC 1 cut(s) 277
BstACI GRCGYC 1 cut(s) 853
BstAPI GCANNNNNTGC 1 cut(s) 1523
BstBI TTCGAA 1 cut(s) 867
BstC8I GCNNGC 3 cut(s) 549, 1095, 1407
BstDEI CTNAG 4 cut(s) 308, 564, 1006, 1377
BstF5I GGATG 5 cut(s) 89, 247, 303, 353, 1166
BstHHI GCGC 2 cut(s) 1005, 1445
BstKTI GATC 5 cut(s) 292, 397, 708, 1235, 1334
BstMAI GTCTC 2 cut(s) 199, 831
BstMBI GATC 5 cut(s) 289, 394, 705, 1232, 1331
BstMWI GCNNNNNNNGC 5 cut(s) 43, 656, 1286, 1494, 1523
BstNI CCWGG 3 cut(s) 229, 932, 1580
BstSCI CCNGG 3 cut(s) 227, 930, 1578
BstSFI CTRYAG 1 cut(s) 878
BstV1I GCAGC 2 cut(s) 859, 932
BstV2I GAAGAC 2 cut(s) 513, 685
BstX2I RGATCY 3 cut(s) 394, 1232, 1331
BstYI RGATCY 3 cut(s) 394, 1232, 1331
BsuI GTATCC 1 cut(s) 599
BsuRI GGCC 4 cut(s) 478, 509, 1409, 1532
BtsCI GGATG 5 cut(s) 89, 247, 303, 353, 1166
BtsIMutI CAGTG 4 cut(s) 429, 1084, 1424, 1526
BveI ACCTGC 1 cut(s) 530
Cac8I GCNNGC 3 cut(s) 549, 1095, 1407
CciI TCATGA 1 cut(s) 1270
CfoI GCGC 2 cut(s) 1005, 1445
Cfr10I RCCGGY 1 cut(s) 1310
Cfr13I GGNCC 3 cut(s) 476, 507, 1555
CseI GACGC 2 cut(s) 861, 908
Csp6I GTAC 4 cut(s) 58, 628, 635, 1226
CspCI CAANNNNNGTGG 2 cut(s) 819, 854
CviAII CATG 5 cut(s) 120, 238, 265, 1271, 1446
CviQI GTAC 4 cut(s) 58, 628, 635, 1226
DdeI CTNAG 4 cut(s) 308, 564, 1006, 1377
DpnI GATC 5 cut(s) 291, 396, 707, 1234, 1333
DpnII GATC 5 cut(s) 289, 394, 705, 1232, 1331
EaeI YGGCCR 1 cut(s) 1530
Eam1104I CTCTTC 1 cut(s) 277
EarI CTCTTC 1 cut(s) 277
Ecl136II GAGCTC 1 cut(s) 1488
Eco130I CCWWGG 1 cut(s) 1361
Eco24I GRGCYC 1 cut(s) 1490
Eco47I GGWCC 1 cut(s) 1555
Eco53kI GAGCTC 1 cut(s) 1488
Eco88I CYCGRG 1 cut(s) 821
EcoICRI GAGCTC 1 cut(s) 1488
EcoO109I RGGNCCY 1 cut(s) 507
EcoRII CCWGG 3 cut(s) 227, 930, 1578
EcoT14I CCWWGG 1 cut(s) 1361
EcoT38I GRGCYC 1 cut(s) 1490
ErhI CCWWGG 1 cut(s) 1361
Esp3I CGTCTC 1 cut(s) 199
FaeI CATG 5 cut(s) 123, 241, 268, 1274, 1449
FaqI GGGAC 2 cut(s) 1132, 1541
FatI CATG 5 cut(s) 119, 237, 264, 1270, 1445
Fnu4HI GCNGC 3 cut(s) 873, 921, 1515
FokI GGATG 5 cut(s) 76, 254, 310, 360, 1153
FriOI GRGCYC 1 cut(s) 1490
Fsp4HI GCNGC 3 cut(s) 873, 921, 1515
FspBI CTAG 1 cut(s) 195
GlaI GCGC 2 cut(s) 1004, 1444
GluI GCNGC 3 cut(s) 873, 921, 1515
HaeIII GGCC 4 cut(s) 478, 509, 1409, 1532
HapII CCGG 3 cut(s) 1185, 1311, 1410
HgaI GACGC 2 cut(s) 861, 908
HhaI GCGC 2 cut(s) 1005, 1445
Hin1I GRCGYC 1 cut(s) 853
Hin1II CATG 5 cut(s) 123, 241, 268, 1274, 1449
Hin6I GCGC 2 cut(s) 1003, 1443
HinP1I GCGC 2 cut(s) 1003, 1443
HinfI GANTC 5 cut(s) 169, 824, 957, 1101, 1588
HpaII CCGG 3 cut(s) 1185, 1311, 1410
HphI GGTGA 2 cut(s) 360, 1441
Hpy166II GTNNAC 1 cut(s) 1432
Hpy188I TCNGA 4 cut(s) 565, 776, 1232, 1378
Hpy188III TCNNGA 7 cut(s) 204, 821, 914, 950, 1240, 1271, 1387
Hpy8I GTNNAC 1 cut(s) 1432
HpyAV CCTTC 2 cut(s) 739, 1510
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4IV ACGT 1 cut(s) 208
HpyCH4V TGCA 8 cut(s) 77, 383, 452, 539, 875, 1166, 1214, 1526
HpyF10VI GCNNNNNNNGC 5 cut(s) 43, 656, 1286, 1494, 1523
HpyF3I CTNAG 4 cut(s) 308, 564, 1006, 1377
HpySE526I ACGT 1 cut(s) 208
Hsp92I GRCGYC 1 cut(s) 853
Hsp92II CATG 5 cut(s) 123, 241, 268, 1274, 1449
HspAI GCGC 2 cut(s) 1003, 1443
KpnI GGTACC 1 cut(s) 638
Kzo9I GATC 5 cut(s) 289, 394, 705, 1232, 1331
LmnI GCTCC 7 cut(s) 437, 461, 617, 1352, 1485, 1493, 1595
Lsp1109I GCAGC 2 cut(s) 859, 932
LweI GCATC 5 cut(s) 338, 1029, 1175, 1223, 1298
MaeI CTAG 1 cut(s) 195
MaeII ACGT 1 cut(s) 208
MaeIII GTNAC 3 cut(s) 366, 1150, 1306
MalI GATC 5 cut(s) 291, 396, 707, 1234, 1333
MboI GATC 5 cut(s) 289, 394, 705, 1232, 1331
MboII GAAGA 7 cut(s) 118, 294, 404, 513, 662, 690, 1200
MfeI CAATTG 1 cut(s) 444
MflI RGATCY 3 cut(s) 394, 1232, 1331
MhlI GDGCHC 2 cut(s) 1209, 1490
MlsI TGGCCA 1 cut(s) 1532
MluNI TGGCCA 1 cut(s) 1532
MlyI GAGTC 2 cut(s) 833, 951
MmeI TCCRAC 3 cut(s) 694, 734, 1463
MnlI CCTC 5 cut(s) 278, 559, 668, 750, 1206
Mox20I TGGCCA 1 cut(s) 1532
MroXI GAANNNNTTC 3 cut(s) 520, 1436, 1587
MscI TGGCCA 1 cut(s) 1532
MseI TTAA 7 cut(s) 399, 404, 701, 770, 1056, 1398, 1602
MslI CAYNNNNRTG 1 cut(s) 1450
Msp20I TGGCCA 1 cut(s) 1532
MspI CCGG 3 cut(s) 1185, 1311, 1410
MspR9I CCNGG 3 cut(s) 229, 932, 1580
MunI CAATTG 1 cut(s) 444
Mva1269I GAATGC 1 cut(s) 1314
MvaI CCWGG 3 cut(s) 229, 932, 1580
MwoI GCNNNNNNNGC 5 cut(s) 43, 656, 1286, 1494, 1523
NdeII GATC 5 cut(s) 289, 394, 705, 1232, 1331
NlaIII CATG 5 cut(s) 123, 241, 268, 1274, 1449
NlaIV GGNNCC 8 cut(s) 433, 508, 619, 636, 1333, 1498, 1557, 1597
NmuCI GTSAC 1 cut(s) 366
NspV TTCGAA 1 cut(s) 867
PagI TCATGA 1 cut(s) 1270
PcsI WCGNNNNNNNCGW 1 cut(s) 1500
PctI GAATGC 1 cut(s) 1314
PdmI GAANNNNTTC 3 cut(s) 520, 1436, 1587
PfeI GAWTC 3 cut(s) 169, 1101, 1588
PfoI TCCNGGA 1 cut(s) 930
PkrI GCNGC 3 cut(s) 874, 922, 1516
PleI GAGTC 2 cut(s) 832, 951
PpsI GAGTC 2 cut(s) 832, 951
PshBI ATTAAT 1 cut(s) 770
Psp124BI GAGCTC 1 cut(s) 1490
Psp6I CCWGG 3 cut(s) 227, 930, 1578
PspGI CCWGG 3 cut(s) 227, 930, 1578
PspN4I GGNNCC 8 cut(s) 433, 508, 619, 636, 1333, 1498, 1557, 1597
PspPI GGNCC 3 cut(s) 476, 507, 1555
PsuI RGATCY 3 cut(s) 394, 1232, 1331
RsaI GTAC 4 cut(s) 59, 629, 636, 1227
RsaNI GTAC 4 cut(s) 58, 628, 635, 1226
RseI CAYNNNNRTG 1 cut(s) 1450
SacI GAGCTC 1 cut(s) 1490
SaqAI TTAA 7 cut(s) 399, 404, 701, 770, 1056, 1398, 1602
SatI GCNGC 3 cut(s) 873, 921, 1515
Sau3AI GATC 5 cut(s) 289, 394, 705, 1232, 1331
Sau96I GGNCC 3 cut(s) 476, 507, 1555
SchI GAGTC 2 cut(s) 833, 951
ScrFI CCNGG 3 cut(s) 229, 932, 1580
SduI GDGCHC 2 cut(s) 1209, 1490
SfaNI GCATC 5 cut(s) 338, 1029, 1175, 1223, 1298
SfcI CTRYAG 1 cut(s) 878
SfuI TTCGAA 1 cut(s) 867
SinI GGWCC 1 cut(s) 1555
SmiMI CAYNNNNRTG 1 cut(s) 1450
SmlI CTYRAG 3 cut(s) 53, 511, 1262
SmoI CTYRAG 3 cut(s) 53, 511, 1262
SpeI ACTAGT 1 cut(s) 194
SsiI CCGC 2 cut(s) 485, 1515
SspI AATATT 1 cut(s) 30
SspMI CTAG 1 cut(s) 195
SstI GAGCTC 1 cut(s) 1490
StyD4I CCNGG 3 cut(s) 227, 930, 1578
StyI CCWWGG 1 cut(s) 1361
TaaI ACNGT 1 cut(s) 140
TaiI ACGT 1 cut(s) 211
TaqI TCGA 6 cut(s) 203, 213, 499, 673, 867, 1550
TaqII GACCGA 1 cut(s) 794
TatI WGTACW 1 cut(s) 57
TauI GCSGC 1 cut(s) 1517
TfiI GAWTC 3 cut(s) 169, 1101, 1588
Tru1I TTAA 7 cut(s) 399, 404, 701, 770, 1056, 1398, 1602
Tru9I TTAA 7 cut(s) 399, 404, 701, 770, 1056, 1398, 1602
TscAI CASTG 4 cut(s) 429, 1084, 1431, 1533
TseFI GTSAC 1 cut(s) 366
TseI GCWGC 2 cut(s) 872, 920
Tsp45I GTSAC 1 cut(s) 366
TspDTI ATGAA 9 cut(s) 108, 189, 288, 634, 721, 805, 1242, 1259, 1580
TspGWI ACGGA 2 cut(s) 624, 1159
TspRI CASTG 4 cut(s) 429, 1084, 1431, 1533
VpaK11BI GGWCC 1 cut(s) 1555
VspI ATTAAT 1 cut(s) 770
XapI RAATTY 3 cut(s) 83, 114, 341
XcmI CCANNNNNNNNNTGG 2 cut(s) 235, 1540
XmnI GAANNNNTTC 3 cut(s) 520, 1436, 1587
XspI CTAG 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.