FvH4_3g11610

Belongs to the glycosyl hydrolase 31 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
6851111 .. 6854486
3376 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g11610.t1

Sequence Viewer

Length: 2631 bp
ATGGAAAGAAACCGATCAAAACACACAGCAAAGGCCACATTCCATCATCTTCTACCAGTCTTCTTCTTCTATGTTTTCTTCTCTCTTGATTGCTTATTTGCACAAGAGTTAGTTGGCTATGGATATAAAGTCCAGTCTGTAAATAGTTCTGATTCCTCCGGAAAGACATTGACGGTTAACCTTGGCCTCATCAACAGCTCCTCAGTTTATGGACCTGACATCTCAAATCTCACCCTCTATGTCAGCTATGAGACAAAAGACCGCTTGAGAGTTCGAATAACAGACTCAACCCAACAAAGATGGGAGATCCCACAAGAAATCATCCCCCGCCAAAACCAAACTTCACAAAACTTTTCCGTCACCGACAACGACCTCGTTTTTACCCTCCGCAATACCACCCCATTCGGATTCACCATCACCCGCCGCTCCACCAACGACACCGTTTTCGACACCACCCCGAACCCCTCCGACCCCAACACCACCTTCATCTTCAAAGACCAATACATCCAGCTCTCTTCCTCCCTCCCCAACAACAGGTCATCCCTGTACGGCCTAGGAGAACACACCAAGAGCACCTTCAAGATCCTAGCCAATCAGATGCTAACACTCTGGGCCGCCGACATCGCCAGCGTCAATCCCGACCTCAATCTGTATGGCTCCCACCCCTTCTACATGGACGTCAGGTCGCCGTCCGGTGATGGCAGGGTCAAGGCGGGAACCACTCACGGCGTGCTGCTTCTGAATAGCAATGGCATGGATGTAAATTACACCGGGGACAGGGTCACTTATAATGTGATTGGCGGAGTTGTGGACTTGTATTTCTTTGCGGGTCCGACACCCGAATCGGTGATGGACCAGTATACGGAGCTCATTGGTCGACCCGCCCCGATGCCATATTGGTCTTTCGGATTCCACCAGTGTAAATATGGTTACAAGAATGTTTCTGACCTTGAGGGGGTGGTTGCTGGTTATGCAAACGCTAGTATCCCTCTTGATGTTATGTGGACAGACATCGACTACATGGATGCCTACAAAGATTTCACTCTTGATCCCGTCAACTTTCCACTAGACAAGATGCAGAACTTTACCAACACCCTTCACCAAAATGGTCAGAAATACGTGGTCATTTTGGATCCCGGTATTAGTATTAATGACAGCTATGGATCCTACACCAGAGGGAAGGAAGCAGATATATACATAAAACGTGATGGCATTCCTTACCAGGGAAATGTATGGCCTGGTGATGTTTACTTTCCTGATTTTGTTCATCCACAAAGTGAACCGTATTGGGAGAATGAGATCAAACTATTTATAGACCAGCTACCTGTTGATGGCCTTTGGATTGATATGAATGAAGTCTCAAATTTCCAAACTTCTGCTCCGACTCCTAATTCTACACTTGATGACCCACCGTACAAGATCAACGATTCTGGCGGCCACCGTCCGATCCTCAGTAAGACTATTCCAGGATCAGCTCTTCACTATGGTAATGTTACAGAGTACAATGTTCATAACCTATATGGGATGTTACAAGCCAAAGCAACAAACAAGGCCTTGACCAATGTCACTGGTAAGAGACCGTTTGTTCTCTCGAGATCAACTTTTGTAAGCTCTGGTAAGTACGCAGCACATTGGACTGGAGACAATGGTGCAAGATGGAATGACTTGGCATACTCAATTCCGGGGATTTTGAATTTTGGCCTCTTTGGAGTTCCAATGGTTGGAGCTGATATATGTGGTTTTATTGGAGATACTAATGAAGAACTCTGCCGGCGTTGGATTCAGGTAGGGGCCTTTTACCCCTTTTCAAGAGATCACTCGGACAAGAATTCAATCCGGCAAGAGCTCTATGTTTGGGAATCGGTGGCTGCATCAGCAAAGAAGGTGCTGGGGCTGCGTTACCGGCTGCTCCCCTTGTACTACACATCGATGTATCAAGCACACAAGAACGGGACCCCAATTGCAAGGCCCCTATTCTTCTCATTTCCAGAAGACACCAATACATACGACATCAGTTCGCAGTTTCTGATTGGTAAAGGCGTAATGGTGTCACCTGTGTTACAGCAAGGAGCAACTTCAGTTGAGGCATATTTTCCTGCAGGAAATTGGTATGATCTTTTCAACTACACATCATTAAGTGTAGACACTGGAAAGAATGTTACGTTGGATGCACCTCCTGATCATATCAACGTTCATGTCCACGAAGGTAACATTCTGGCCTTGCAAGGAGAGGCCTTGACAACACAAGCAGCCCGAAACACTTCATTCGAACTTTTGGTGGTCATTGGTAGTAGCAATGAGAGTGCTGGAGAAGTGTTCTTGGACGATGGAGAGGAGCTTGAAATGGGAGGAGAGGGAGGGAAGTGGAGCTTCGTGAGGTTTCATTCTGCTCGAGCACAAAATGGAAGTCTAATTTTGAGCTCAAATGTCGAAAATGGAGATTTTGCACTAAGCCAAGGCTGGATCATTGATAAAATTACCGTCCTCGGGTTGGACAAAGATCATGCCAAGGTAGAGTCTAGTGTATCCCTTCCTATAGGAAAGGAGTTTGAGTTGGAGCTGAAGCCGAATCAGACAGTGACGAAAACACTCTTTAGTAGAGATCAGTTGCATACACAACTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

877

Amino Acids

97.87

Weight (kDa)

5.29

Isoelectric Point (pI)

31.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gal_mutarotas_2 PF13802 82 - 249 6.3e-11 Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd PF01055 294 - 642 1.7e-122 Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd PF21365 651 - 739 4.4e-26 Glycosyl hydrolase family 31 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 789
AatII GACGTC 1 cut(s) 681
AccB7I CCANNNNNTGG 1 cut(s) 1721
AccBSI CCGCTC 1 cut(s) 426
AccI GTMKAC 3 cut(s) 860, 877, 2142
AccIII TCCGGA 1 cut(s) 158
AclI AACGTT 1 cut(s) 2190
AcoI YGGCCR 1 cut(s) 1435
AcsI RAATTY 3 cut(s) 1363, 1693, 1828
AcuI CTGAAG 2 cut(s) 2061, 2582
AcyI GRCGYC 1 cut(s) 678
AdeI CACNNNGTG 2 cut(s) 730, 1277
AfaI GTAC 5 cut(s) 548, 1415, 1502, 1622, 1919
AfiI CCNNNNNNNGG 9 cut(s) 534, 777, 862, 955, 1223, 1331, 1721, 2487, 2491
AgsI TTSAA 7 cut(s) 493, 580, 1693, 1809, 1833, 2122, 2342
AhdI GACNNNNNGTC 1 cut(s) 682
AjnI CCWGG 3 cut(s) 1221, 1237, 1465
AjuI GAANNNNNNNTTGG 6 cut(s) 467, 499, 560, 592, 2147, 2179
Alw21I GWGCWC 5 cut(s) 575, 870, 1848, 2398, 2423
Alw26I GTCTC 4 cut(s) 245, 1363, 1570, 1635
AlwNI CAGNNNCTG 1 cut(s) 2026
Ama87I CYCGRG 3 cut(s) 1591, 2391, 2486
Aor13HI TCCGGA 1 cut(s) 158
ApeKI GCWGC 6 cut(s) 733, 1625, 1868, 1894, 1906, 2249
ApoI RAATTY 3 cut(s) 1363, 1693, 1828
ArsI GACNNNNNNTTYG 4 cut(s) 428, 460, 2392, 2424
AseI ATTAAT 1 cut(s) 1149
Asp700I GAANNNNTTC 1 cut(s) 2260
AspA2I CCTAGG 1 cut(s) 553
AspS9I GGNCC 7 cut(s) 212, 612, 830, 853, 1791, 1953, 1968
AsuC2I CCSGG 3 cut(s) 772, 1137, 1683
AsuHPI GGTGA 9 cut(s) 223, 352, 403, 409, 707, 859, 1091, 1253, 2043
AsuII TTCGAA 2 cut(s) 274, 2268
AvaI CYCGRG 3 cut(s) 1591, 2391, 2486
AvaII GGWCC 4 cut(s) 212, 830, 853, 1953
AvrII CCTAGG 1 cut(s) 553
BaeI ACNNNNGTAYC 2 cut(s) 967, 1000
BamHI GGATCC 2 cut(s) 1132, 1163
BanII GRGCYC 3 cut(s) 870, 1848, 2423
BbsI GAAGAC 2 cut(s) 52, 1998
Bbv12I GWGCWC 5 cut(s) 575, 870, 1848, 2398, 2423
BbvI GCAGC 6 cut(s) 720, 1637, 1855, 1881, 1893, 2261
BccI CCATC 9 cut(s) 51, 294, 422, 692, 844, 1202, 1325, 1650, 2321
BceAI ACGGC 3 cut(s) 565, 673, 742
BciT130I CCWGG 3 cut(s) 1223, 1239, 1467
BciVI GTATCC 2 cut(s) 995, 2536
BclI TGATCA 1 cut(s) 2179
BcnI CCSGG 3 cut(s) 772, 1137, 1683
BcoDI GTCTC 4 cut(s) 245, 1363, 1570, 1635
BfaI CTAG 5 cut(s) 554, 587, 981, 1067, 2520
BfmI CTRYAG 2 cut(s) 2097, 2535
BfuI GTATCC 2 cut(s) 995, 2536
BisI GCNGC 9 cut(s) 424, 615, 734, 1435, 1626, 1869, 1895, 1907, 2250
BlnI CCTAGG 1 cut(s) 553
BlsI GCNGC 9 cut(s) 425, 616, 735, 1436, 1627, 1870, 1896, 1908, 2251
Bme1390I CCNGG 6 cut(s) 772, 1137, 1223, 1239, 1467, 1683
Bme18I GGWCC 4 cut(s) 212, 830, 853, 1953
BmeRI GACNNNNNGTC 1 cut(s) 682
BmeT110I CYCGRG 3 cut(s) 1591, 2391, 2486
BmgT120I GGNCC 7 cut(s) 212, 612, 830, 853, 1791, 1953, 1968
BmiI GGNNCC 9 cut(s) 658, 718, 831, 1134, 1165, 1792, 1954, 1955, 1970
BmrFI CCNGG 6 cut(s) 772, 1137, 1223, 1239, 1467, 1683
BmsI GCATC 6 cut(s) 588, 879, 1015, 1065, 1880, 2158
BoxI GACNNNNGTC 1 cut(s) 1562
BpiI GAAGAC 2 cut(s) 52, 1998
BpmI CTGGAG 2 cut(s) 1659, 2328
Bpu14I TTCGAA 2 cut(s) 274, 2268
BpuEI CTTGAG 2 cut(s) 286, 971
BpuMI CCSGG 3 cut(s) 772, 1137, 1683
Bsa29I ATCGAT 1 cut(s) 1928
BsaAI YACGTR 1 cut(s) 1120
BsaHI GRCGYC 1 cut(s) 678
BsaI GGTCTC 1 cut(s) 1570
BsaJI CCNNGG 8 cut(s) 181, 553, 771, 1222, 1682, 2455, 2485, 2508
BsaWI WCCGGW 2 cut(s) 158, 692
BsaXI ACNNNNNCTCC 4 cut(s) 1363, 1393, 2537, 2567
Bsc4I CCNNNNNNNGG 9 cut(s) 534, 777, 862, 955, 1223, 1331, 1721, 2487, 2491
Bse118I RCCGGY 2 cut(s) 1770, 1902
Bse1I ACTGG 7 cut(s) 56, 133, 856, 916, 1573, 1642, 2152
Bse3DI GCAATG 2 cut(s) 754, 2302
BseAI TCCGGA 1 cut(s) 158
BseBI CCWGG 3 cut(s) 1223, 1239, 1467
BseCI ATCGAT 1 cut(s) 1928
BseDI CCNNGG 8 cut(s) 181, 553, 771, 1222, 1682, 2455, 2485, 2508
BseGI GGATG 8 cut(s) 321, 504, 539, 763, 1030, 1267, 1530, 2173
BseLI CCNNNNNNNGG 9 cut(s) 534, 777, 862, 955, 1223, 1331, 1721, 2487, 2491
BseMI GCAATG 2 cut(s) 754, 2302
BseMII CTCAG 2 cut(s) 216, 1465
BseNI ACTGG 7 cut(s) 56, 133, 856, 916, 1573, 1642, 2152
BseRI GAGGAG 3 cut(s) 190, 2348, 2364
BseXI GCAGC 6 cut(s) 720, 1637, 1855, 1881, 1893, 2261
BseYI CCCAGC 1 cut(s) 1888
BshVI ATCGAT 1 cut(s) 1928
BsiHKAI GWGCWC 5 cut(s) 575, 870, 1848, 2398, 2423
BsiHKCI CYCGRG 3 cut(s) 1591, 2391, 2486
BsiSI CCGG 8 cut(s) 159, 693, 771, 1137, 1682, 1771, 1837, 1903
BslFI GGGAC 2 cut(s) 788, 1966
BslI CCNNNNNNNGG 9 cut(s) 534, 777, 862, 955, 1223, 1331, 1721, 2487, 2491
BsmAI GTCTC 4 cut(s) 245, 1363, 1570, 1635
BsmFI GGGAC 2 cut(s) 788, 1966
BsmI GAATGC 1 cut(s) 1212
Bso31I GGTCTC 1 cut(s) 1570
BsoBI CYCGRG 3 cut(s) 1591, 2391, 2486
Bsp119I TTCGAA 2 cut(s) 274, 2268
Bsp1286I GDGCHC 5 cut(s) 575, 870, 1848, 2398, 2423
Bsp13I TCCGGA 1 cut(s) 158
BspCNI CTCAG 2 cut(s) 215, 1464
BspDI ATCGAT 1 cut(s) 1928
BspEI TCCGGA 1 cut(s) 158
BspLI GGNNCC 9 cut(s) 658, 718, 831, 1134, 1165, 1792, 1954, 1955, 1970
BspMAI CTGCAG 1 cut(s) 2101
BspQI GCTCTTC 1 cut(s) 1482
BspT104I TTCGAA 2 cut(s) 274, 2268
BspTNI GGTCTC 1 cut(s) 1570
BsrBI CCGCTC 1 cut(s) 426
BsrDI GCAATG 2 cut(s) 754, 2302
BsrFI RCCGGY 2 cut(s) 1770, 1902
BsrI ACTGG 7 cut(s) 56, 133, 856, 916, 1573, 1642, 2152
BssAI RCCGGY 2 cut(s) 1770, 1902
BssECI CCNNGG 8 cut(s) 181, 553, 771, 1222, 1682, 2455, 2485, 2508
BssNAI GTATAC 1 cut(s) 861
BssNI GRCGYC 1 cut(s) 678
BssT1I CCWWGG 4 cut(s) 181, 553, 2455, 2508
Bst1107I GTATAC 1 cut(s) 861
Bst2UI CCWGG 3 cut(s) 1223, 1239, 1467
Bst4CI ACNGT 9 cut(s) 175, 442, 1284, 1413, 1442, 1581, 2482, 2578, 2622
Bst6I CTCTTC 2 cut(s) 520, 1482
BstACI GRCGYC 1 cut(s) 678
BstBAI YACGTR 1 cut(s) 1120
BstBI TTCGAA 2 cut(s) 274, 2268
BstC8I GCNNGC 3 cut(s) 628, 731, 1772
BstDEI CTNAG 3 cut(s) 202, 1451, 2450
BstF5I GGATG 8 cut(s) 321, 504, 539, 763, 1030, 1267, 1530, 2173
BstMAI GTCTC 4 cut(s) 245, 1363, 1570, 1635
BstMWI GCNNNNNNNGC 5 cut(s) 623, 971, 1874, 1894, 1903
BstNI CCWGG 3 cut(s) 1223, 1239, 1467
BstPAI GACNNNNGTC 1 cut(s) 1562
BstSCI CCNGG 6 cut(s) 770, 1135, 1221, 1237, 1465, 1681
BstSFI CTRYAG 2 cut(s) 2097, 2535
BstV1I GCAGC 6 cut(s) 720, 1637, 1855, 1881, 1893, 2261
BstV2I GAAGAC 2 cut(s) 52, 1998
BstX2I RGATCY 4 cut(s) 306, 582, 1132, 1163
BstYI RGATCY 4 cut(s) 306, 582, 1132, 1163
BstZ17I GTATAC 1 cut(s) 861
Bsu15I ATCGAT 1 cut(s) 1928
BsuI GTATCC 2 cut(s) 995, 2536
BsuTUI ATCGAT 1 cut(s) 1928
BtgZI GCGATG 1 cut(s) 607
BtsCI GGATG 8 cut(s) 321, 504, 539, 763, 1030, 1267, 1530, 2173
BtsIMutI CAGTG 4 cut(s) 923, 1566, 2145, 2583
Cac8I GCNNGC 3 cut(s) 628, 731, 1772
CaiI CAGNNNCTG 1 cut(s) 2026
Cfr10I RCCGGY 2 cut(s) 1770, 1902
Cfr13I GGNCC 7 cut(s) 212, 612, 830, 853, 1791, 1953, 1968
ClaI ATCGAT 1 cut(s) 1928
CseI GACGC 1 cut(s) 619
Csp6I GTAC 5 cut(s) 547, 1414, 1501, 1621, 1918
CviAII CATG 5 cut(s) 673, 754, 1021, 2195, 2504
CviQI GTAC 5 cut(s) 547, 1414, 1501, 1621, 1918
DdeI CTNAG 3 cut(s) 202, 1451, 2450
DraIII CACNNNGTG 2 cut(s) 730, 1277
DriI GACNNNNNGTC 1 cut(s) 682
EaeI YGGCCR 1 cut(s) 1435
Eam1104I CTCTTC 2 cut(s) 520, 1482
Eam1105I GACNNNNNGTC 1 cut(s) 682
EarI CTCTTC 2 cut(s) 520, 1482
EciI GGCGGA 1 cut(s) 816
Ecl136II GAGCTC 3 cut(s) 868, 1846, 2421
Eco130I CCWWGG 4 cut(s) 181, 553, 2455, 2508
Eco147I AGGCCT 2 cut(s) 1553, 2234
Eco24I GRGCYC 3 cut(s) 870, 1848, 2423
Eco31I GGTCTC 1 cut(s) 1570
Eco47I GGWCC 4 cut(s) 212, 830, 853, 1953
Eco53kI GAGCTC 3 cut(s) 868, 1846, 2421
Eco57I CTGAAG 2 cut(s) 2061, 2582
Eco88I CYCGRG 3 cut(s) 1591, 2391, 2486
EcoICRI GAGCTC 3 cut(s) 868, 1846, 2421
EcoO109I RGGNCCY 3 cut(s) 1791, 1953, 1968
EcoRI GAATTC 1 cut(s) 1828
EcoRII CCWGG 3 cut(s) 1221, 1237, 1465
EcoT14I CCWWGG 4 cut(s) 181, 553, 2455, 2508
EcoT38I GRGCYC 3 cut(s) 870, 1848, 2423
ErhI CCWWGG 4 cut(s) 181, 553, 2455, 2508
FaeI CATG 5 cut(s) 676, 757, 1024, 2198, 2507
FalI AAGNNNNNCTT 4 cut(s) 560, 592, 2354, 2386
FaqI GGGAC 2 cut(s) 788, 1966
FatI CATG 5 cut(s) 672, 753, 1020, 2194, 2503
FauI CCCGC 5 cut(s) 335, 428, 706, 820, 889
FbaI TGATCA 1 cut(s) 2179
FblI GTMKAC 3 cut(s) 860, 877, 2142
Fnu4HI GCNGC 9 cut(s) 424, 615, 734, 1435, 1626, 1869, 1895, 1907, 2250
FokI GGATG 8 cut(s) 308, 491, 526, 770, 1037, 1254, 1537, 2180
FriOI GRGCYC 3 cut(s) 870, 1848, 2423
Fsp4HI GCNGC 9 cut(s) 424, 615, 734, 1435, 1626, 1869, 1895, 1907, 2250
FspBI CTAG 5 cut(s) 554, 587, 981, 1067, 2520
GluI GCNGC 9 cut(s) 424, 615, 734, 1435, 1626, 1869, 1895, 1907, 2250
GsaI CCCAGC 1 cut(s) 1892
GsuI CTGGAG 2 cut(s) 1659, 2328
HapII CCGG 8 cut(s) 159, 693, 771, 1137, 1682, 1771, 1837, 1903
HgaI GACGC 1 cut(s) 619
Hin1I GRCGYC 1 cut(s) 678
Hin1II CATG 5 cut(s) 676, 757, 1024, 2198, 2507
HincII GTYRAC 3 cut(s) 178, 878, 1057
HindII GTYRAC 3 cut(s) 178, 878, 1057
HpaI GTTAAC 1 cut(s) 178
HpaII CCGG 8 cut(s) 159, 693, 771, 1137, 1682, 1771, 1837, 1903
HphI GGTGA 9 cut(s) 223, 352, 403, 409, 707, 859, 1091, 1253, 2043
HpyAV CCTTC 8 cut(s) 493, 586, 676, 1106, 1174, 1876, 2198, 2540
HpyCH4III ACNGT 9 cut(s) 175, 442, 1284, 1413, 1442, 1581, 2482, 2578, 2622
HpyCH4IV ACGT 5 cut(s) 678, 1119, 1204, 2162, 2190
HpyF10VI GCNNNNNNNGC 5 cut(s) 623, 971, 1874, 1894, 1903
HpyF3I CTNAG 3 cut(s) 202, 1451, 2450
HpySE526I ACGT 5 cut(s) 678, 1119, 1204, 2162, 2190
Hsp92I GRCGYC 1 cut(s) 678
Hsp92II CATG 5 cut(s) 676, 757, 1024, 2198, 2507
KflI GGGWCCC 1 cut(s) 1953
Kpn2I TCCGGA 1 cut(s) 158
KroI GCCGGC 1 cut(s) 1770
KroNI GCCGGC 1 cut(s) 1772
Ksp22I TGATCA 1 cut(s) 2179
KspAI GTTAAC 1 cut(s) 178
LguI GCTCTTC 1 cut(s) 1482
Lsp1109I GCAGC 6 cut(s) 720, 1637, 1855, 1881, 1893, 2261
LweI GCATC 6 cut(s) 588, 879, 1015, 1065, 1880, 2158
MaeI CTAG 5 cut(s) 554, 587, 981, 1067, 2520
MaeII ACGT 5 cut(s) 678, 1119, 1204, 2162, 2190
MbiI CCGCTC 1 cut(s) 426
MfeI CAATTG 1 cut(s) 1959
MflI RGATCY 4 cut(s) 306, 582, 1132, 1163
MhlI GDGCHC 5 cut(s) 575, 870, 1848, 2398, 2423
MlyI GAGTC 3 cut(s) 278, 1378, 2525
MmeI TCCRAC 8 cut(s) 492, 857, 1406, 1702, 1757, 2145, 2472, 2535
MroI TCCGGA 1 cut(s) 158
MroNI GCCGGC 1 cut(s) 1770
MroXI GAANNNNTTC 1 cut(s) 2260
MseI TTAA 5 cut(s) 177, 1149, 2135, 2625, 2629
MslI CAYNNNNRTG 2 cut(s) 1104, 1928
MspI CCGG 8 cut(s) 159, 693, 771, 1137, 1682, 1771, 1837, 1903
MspR9I CCNGG 6 cut(s) 772, 1137, 1223, 1239, 1467, 1683
MunI CAATTG 1 cut(s) 1959
Mva1269I GAATGC 1 cut(s) 1212
MvaI CCWGG 3 cut(s) 1223, 1239, 1467
MwoI GCNNNNNNNGC 5 cut(s) 623, 971, 1874, 1894, 1903
NaeI GCCGGC 1 cut(s) 1772
NciI CCSGG 3 cut(s) 772, 1137, 1683
NgoMIV GCCGGC 1 cut(s) 1770
NlaIII CATG 5 cut(s) 676, 757, 1024, 2198, 2507
NlaIV GGNNCC 9 cut(s) 658, 718, 831, 1134, 1165, 1792, 1954, 1955, 1970
NmuCI GTSAC 5 cut(s) 358, 781, 1564, 2049, 2578
NspV TTCGAA 2 cut(s) 274, 2268
PacI TTAATTAA 1 cut(s) 2629
PaeR7I CTCGAG 2 cut(s) 1591, 2391
PceI AGGCCT 2 cut(s) 1553, 2234
PciSI GCTCTTC 1 cut(s) 1482
PctI GAATGC 1 cut(s) 1212
PdiI GCCGGC 1 cut(s) 1772
PdmI GAANNNNTTC 1 cut(s) 2260
PfeI GAWTC 8 cut(s) 152, 408, 842, 909, 1427, 1780, 1859, 2569
PflFI GACNNNGTC 1 cut(s) 779
PflMI CCANNNNNTGG 1 cut(s) 1721
PfoI TCCNGGA 1 cut(s) 1465
PkrI GCNGC 9 cut(s) 425, 616, 735, 1436, 1627, 1870, 1896, 1908, 2251
PleI GAGTC 3 cut(s) 278, 1378, 2524
PpsI GAGTC 3 cut(s) 278, 1378, 2524
Ppu21I YACGTR 1 cut(s) 1120
PpuMI RGGWCCY 1 cut(s) 1953
PshAI GACNNNNGTC 1 cut(s) 1562
PshBI ATTAAT 1 cut(s) 1149
PsiI TTATAA 1 cut(s) 789
Psp124BI GAGCTC 3 cut(s) 870, 1848, 2423
Psp1406I AACGTT 1 cut(s) 2190
Psp5II RGGWCCY 1 cut(s) 1953
Psp6I CCWGG 3 cut(s) 1221, 1237, 1465
PspFI CCCAGC 1 cut(s) 1888
PspGI CCWGG 3 cut(s) 1221, 1237, 1465
PspN4I GGNNCC 9 cut(s) 658, 718, 831, 1134, 1165, 1792, 1954, 1955, 1970
PspPI GGNCC 7 cut(s) 212, 612, 830, 853, 1791, 1953, 1968
PspPPI RGGWCCY 1 cut(s) 1953
PspXI VCTCGAGB 1 cut(s) 2391
PstI CTGCAG 1 cut(s) 2101
PstNI CAGNNNCTG 1 cut(s) 2026
PsuI RGATCY 4 cut(s) 306, 582, 1132, 1163
PsyI GACNNNGTC 1 cut(s) 779
RsaI GTAC 5 cut(s) 548, 1415, 1502, 1622, 1919
RsaNI GTAC 5 cut(s) 547, 1414, 1501, 1621, 1918
RseI CAYNNNNRTG 2 cut(s) 1104, 1928
SacI GAGCTC 3 cut(s) 870, 1848, 2423
SalI GTCGAC 1 cut(s) 876
SapI GCTCTTC 1 cut(s) 1482
SaqAI TTAA 5 cut(s) 177, 1149, 2135, 2625, 2629
SatI GCNGC 9 cut(s) 424, 615, 734, 1435, 1626, 1869, 1895, 1907, 2250
Sau96I GGNCC 7 cut(s) 212, 612, 830, 853, 1791, 1953, 1968
SbfI CCTGCAGG 1 cut(s) 2101
SchI GAGTC 3 cut(s) 278, 1378, 2525
ScrFI CCNGG 6 cut(s) 772, 1137, 1223, 1239, 1467, 1683
SdaI CCTGCAGG 1 cut(s) 2101
SduI GDGCHC 5 cut(s) 575, 870, 1848, 2398, 2423
SfaNI GCATC 6 cut(s) 588, 879, 1015, 1065, 1880, 2158
SfcI CTRYAG 2 cut(s) 2097, 2535
Sfr274I CTCGAG 2 cut(s) 1591, 2391
SfuI TTCGAA 2 cut(s) 274, 2268
SinI GGWCC 4 cut(s) 212, 830, 853, 1953
SlaI CTCGAG 2 cut(s) 1591, 2391
SmiMI CAYNNNNRTG 2 cut(s) 1104, 1928
SmlI CTYRAG 4 cut(s) 265, 950, 1591, 2391
SmoI CTYRAG 4 cut(s) 265, 950, 1591, 2391
Sse8387I CCTGCAGG 1 cut(s) 2101
SseBI AGGCCT 2 cut(s) 1553, 2234
SspMI CTAG 5 cut(s) 554, 587, 981, 1067, 2520
SstI GAGCTC 3 cut(s) 870, 1848, 2423
StuI AGGCCT 2 cut(s) 1553, 2234
StyD4I CCNGG 6 cut(s) 770, 1135, 1221, 1237, 1465, 1681
StyI CCWWGG 4 cut(s) 181, 553, 2455, 2508
TaaI ACNGT 9 cut(s) 175, 442, 1284, 1413, 1442, 1581, 2482, 2578, 2622
TaiI ACGT 5 cut(s) 681, 1122, 1207, 2165, 2193
TaqI TCGA 9 cut(s) 274, 447, 877, 1014, 1592, 1928, 2268, 2392, 2430
TatI WGTACW 2 cut(s) 1500, 1917
TauI GCSGC 3 cut(s) 426, 617, 1437
TfiI GAWTC 8 cut(s) 152, 408, 842, 909, 1427, 1780, 1859, 2569
Tru1I TTAA 5 cut(s) 177, 1149, 2135, 2625, 2629
Tru9I TTAA 5 cut(s) 177, 1149, 2135, 2625, 2629
TscAI CASTG 4 cut(s) 923, 1573, 2152, 2583
TseFI GTSAC 5 cut(s) 358, 781, 1564, 2049, 2578
TseI GCWGC 6 cut(s) 733, 1625, 1868, 1894, 1906, 2249
Tsp45I GTSAC 5 cut(s) 358, 781, 1564, 2049, 2578
TspDTI ATGAA 9 cut(s) 475, 1256, 1364, 1368, 1499, 1773, 2183, 2253, 2372
TspGWI ACGGA 2 cut(s) 346, 878
TspRI CASTG 4 cut(s) 923, 1573, 2152, 2583
Tth111I GACNNNGTC 1 cut(s) 779
Van91I CCANNNNNTGG 1 cut(s) 1721
VpaK11BI GGWCC 4 cut(s) 212, 830, 853, 1953
VspI ATTAAT 1 cut(s) 1149
XapI RAATTY 3 cut(s) 1363, 1693, 1828
XcmI CCANNNNNNNNNTGG 1 cut(s) 923
XhoI CTCGAG 2 cut(s) 1591, 2391
XmaJI CCTAGG 1 cut(s) 553
XmiI GTMKAC 3 cut(s) 860, 877, 2142
XmnI GAANNNNTTC 1 cut(s) 2260
XspI CTAG 5 cut(s) 554, 587, 981, 1067, 2520
ZraI GACGTC 1 cut(s) 679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.