Rroxscaffold_1G00059180

Belongs to the glycosyl hydrolase 31 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
81148148 .. 81151686
3539 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00059180.1

Sequence Viewer

Length: 2523 bp
ATGGAAAGAAACCGATCAAAATACACACCAAAAGCCACATTCCATCATCTTCTACCATTCTTCTTCTTCTATGTCTTCTTCTCTCTTGATTGCTTTGTTGCACAAGAGTTAGTTGGGTACGGTTATAAAGTCGAGTCTGTGAATAATTCTGATTCCTCGGGGAAAACATTGACCGTTAACCTTGGTCTCATCAACAGCTCCTCAGTTTATGGACCTGACATCTCAAATCTCACCCTCTATGTTAGCTATGAGACTAAAGATCGTCTAAGAATTCGGATAACGGACTCAACGCAACAAAGATGGGAGCTGCCGCAAGACATTCTCCCCCGCCAAAACCAAACTTCACAGAATTTTTCCGTCACCGACAACGACCTCGTTTTCACCCTCCGCAACACCACCCCGTTCGGCTTCACCATCACCCGCCGCTCCTCTAACGACACCGTTTTCGACACCACCCCAAACCCCTCCGACCCCAACACCACCTTCATTTTTAAGGACCAATACATCCAGCTCTCCTCCGCTCTCCCTAACAACAGGTCCTCCCTGTACGGCCTCGGAGAGCATACCAAGAGCACCTTCAAGCTCCTAGCTAATCAGACTCTGACACTCTGGACAGCCGACATTGGCAGCGTGAATCCCGACCTCAATCTCTATGGGTCCCACCCTTCTACATGGACGTCAGGTCGCCGTCCGGTGATGGCAAGGGTTACTTATAATGTGATTGGCGGAGTAGTTGACTTGTATTTCTTTTCGGGCCCGACACCCGAATTGGTGATGGAGCAGTACACTGAGCTCATTGGTCGACCCGCCCCGATGCCATATTGGGCTTTTGGATTCCACCAGTGCAGATATGGTTACAAGAATGTTTCTGATCTTGAGGGCGTGGTTGCTGGCTATGCAAATGCTAGTATCCCTCTTGAAGTTATGTGGACGGACATTGATTACATGGATGCTTACAAAGATTTTACTCTTGATCCCGTCAACTTTCCACTAGACAGGATGAAGAACTTTACCAACAACCTTCACCAAAACGGTCAGAAATACGTGCTCATCTTGGATCCCGGTATTAGTATCAATGATAGCTATGGAACCTACACTAGAGGGAAGGAAGCAGATATATTCATAAAGCGTGATGGCAATCCTTACCAGGGAAATGTTTGGCCCGGCAATGTCTACTTTCCTGATTTTGTACATCCACAAAGTGAACCATATTGGGAGAATGAGATTAAACTATTTCTAGACCAGCTACCTGTTGATGGCCTTTGGATTGATATGAATGAAGTATCAAATTTCCAAACTTCTAATCCCACTCCGAATTCCACACTTGATGATCCACCTTACAAAATCAACAATTCTGGAGGCCACAGTCCGATACTTAGTCGGACTATTCCAGGATCAGCTCTACACTTTGGTAATGTTACAGAGTATAATGTTCATAACCTATATGGGATGTTACAAGCCAAAGCAACAAACAAGGCCTTGACCAATTTGACTGGTAAAAGACCGTTTGTTCTCTCGAGATCGACTTTTGTAAGCTCTGGTAAGTACACAGCACACTGGACCGGAGACAATGGTGCAAAATGGAATGATTTGGCGTACTCAATTCCGGGCATTTTGAATTTTGGACTCTTTGGAGTTCCAATGGTTGGAGCTGATATATGTGGTTTCTCTGGGGGTACTAATGAAGAACTCTGCCGGCGTTGGATTCAGCTAGGGGCCTTTTACCCGTTTTCAAGAGATCACTCAGACAAGAATTCAATCCGGCAAGAGCTTTATCTTTGGGAATCAGTGGCAGCATCAGCAAAGAAGGTGCTGGGGCTGCGATACCGGTTGCTTCCCTTGTTCTACACATCAATGTATCAAGCACACAAGAACGGGACCCCAATTGCAAGGCCCTTATTCTTCTCATTTCCAGAAGATACCAATACATACGACATCAGTTCACAGTTTCTGATTGGTAAAGGCGTAATGGTGTCACCTGTGTTGCAGCAAGGAGCAAATTCAGTTGAGGCGTATTTTCCTGCTGGAAACTGGTTCGATCTCTTCAACTACACATCAGTGAGTGTAGATTCCGGAAAGAAAGTTACTTTGGATGCACCGCCTGATCATATCAACGTGCATGTCCACGAAGGAAACATATTGGCCTTGCAAGGAGAGGCCTTGACAACACAAGCAGCCCGAAACACTACATTCGAACTTTTGGTGGTCACTGGTAGTAGCAATGAGAGTACCGGAGAATTGTTCTTGGATGATGGAGAGGAAGTCGAAATGGGAGGAGAGGGAGGGAAGTGGAGTTTTGTGAGGTTTCGTTCTGCACGAGCACAAAATGGAAGTCTTGTTTTGAGCTCAAAGGTCGAAAATGGAGAATTTGCATTAAGCCAAGGTTGGATCATTGATAAAATTACCGTCCTTGGGTTGGACAAAGTTAATGCAACACAGTCTAGTGTATCGCTTCCTATAGGAAAGGAGTTTGAGTTGGAGCTGAAGCCGAATCAGACACTGGCGGAAACACTCTTTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

840

Amino Acids

94.02

Weight (kDa)

5.43

Isoelectric Point (pI)

31.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gal_mutarotas_2 PF13802 85 - 227 1.3e-07 Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd PF01055 269 - 617 3.2e-124 Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd PF21365 626 - 714 3.1e-25 Glycosyl hydrolase family 31 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 126, 714
AatII GACGTC 1 cut(s) 680
AccB7I CCANNNNNTGG 1 cut(s) 1646
AccBSI CCGCTC 2 cut(s) 426, 521
AccI GTMKAC 2 cut(s) 802, 1173
AccIII TCCGGA 1 cut(s) 2072
AclWI GGATC 6 cut(s) 968, 1052, 1065, 1325, 1402, 2396
AcsI RAATTY 8 cut(s) 270, 349, 1288, 1315, 1618, 1753, 1999, 2366
AcuI CTGAAG 1 cut(s) 2504
AcyI GRCGYC 1 cut(s) 677
AdeI CACNNNGTG 1 cut(s) 1202
AfaI GTAC 8 cut(s) 119, 548, 785, 1191, 1547, 1598, 1678, 2230
AfiI CCNNNNNNNGG 5 cut(s) 1148, 1256, 1646, 2412, 2416
AgeI ACCGGT 1 cut(s) 1827
AgsI TTSAA 6 cut(s) 580, 920, 1618, 1734, 1758, 2047
AhdI GACNNNNNGTC 1 cut(s) 681
AjnI CCWGG 2 cut(s) 1146, 1390
AjuI GAANNNNNNNTTGG 6 cut(s) 467, 499, 560, 592, 2072, 2104
AleI CACNNNNGTG 1 cut(s) 2057
Alw21I GWGCWC 5 cut(s) 575, 795, 1050, 2323, 2348
Alw26I GTCTC 3 cut(s) 191, 245, 1560
AlwI GGATC 6 cut(s) 968, 1052, 1065, 1325, 1402, 2396
AlwNI CAGNNNCTG 3 cut(s) 601, 1951, 2500
Ama87I CYCGRG 2 cut(s) 157, 1516
Aor13HI TCCGGA 1 cut(s) 2072
ApaI GGGCCC 1 cut(s) 758
ApeKI GCWGC 6 cut(s) 307, 627, 1793, 1819, 1987, 2174
ApoI RAATTY 8 cut(s) 270, 349, 1288, 1315, 1618, 1753, 1999, 2366
ArsI GACNNNNNNTTYG 4 cut(s) 428, 460, 2317, 2349
AsiGI ACCGGT 1 cut(s) 1827
AsuC2I CCSGG 3 cut(s) 1062, 1164, 1608
AsuHPI GGTGA 9 cut(s) 223, 352, 373, 403, 409, 706, 784, 1016, 1968
AsuII TTCGAA 1 cut(s) 2193
AvaI CYCGRG 2 cut(s) 157, 1516
AvaII GGWCC 6 cut(s) 212, 496, 537, 657, 1560, 1878
BaeGI GKGCMC 1 cut(s) 758
BamHI GGATCC 1 cut(s) 1057
BanII GRGCYC 3 cut(s) 758, 795, 2348
BauI CACGAG 1 cut(s) 2316
BbsI GAAGAC 1 cut(s) 67
Bbv12I GWGCWC 5 cut(s) 575, 795, 1050, 2323, 2348
BbvI GCAGC 6 cut(s) 294, 639, 1805, 1806, 1999, 2186
BccI CCATC 8 cut(s) 51, 294, 422, 691, 769, 1127, 1250, 2246
BceAI ACGGC 2 cut(s) 565, 672
BciT130I CCWGG 2 cut(s) 1148, 1392
BciVI GTATCC 1 cut(s) 920
BclI TGATCA 1 cut(s) 2104
BcnI CCSGG 3 cut(s) 1062, 1164, 1608
BcoDI GTCTC 3 cut(s) 191, 245, 1560
BfaI CTAG 8 cut(s) 587, 906, 992, 1098, 1238, 1712, 2442, 2521
BfmI CTRYAG 1 cut(s) 2457
BfuI GTATCC 1 cut(s) 920
BisI GCNGC 8 cut(s) 308, 311, 424, 628, 1794, 1820, 1988, 2175
BlsI GCNGC 8 cut(s) 309, 312, 425, 629, 1795, 1821, 1989, 2176
Bme1390I CCNGG 5 cut(s) 1062, 1148, 1164, 1392, 1608
Bme18I GGWCC 6 cut(s) 212, 496, 537, 657, 1560, 1878
BmeRI GACNNNNNGTC 1 cut(s) 681
BmeT110I CYCGRG 2 cut(s) 157, 1516
BmiI GGNNCC 8 cut(s) 658, 659, 756, 1059, 1090, 1717, 1879, 1880
BmrFI CCNGG 5 cut(s) 1062, 1148, 1164, 1392, 1608
BmsI GCATC 4 cut(s) 804, 940, 1805, 2083
BpiI GAAGAC 1 cut(s) 67
BpmI CTGGAG 1 cut(s) 1377
Bpu14I TTCGAA 1 cut(s) 2193
BpuEI CTTGAG 1 cut(s) 896
BpuMI CCSGG 3 cut(s) 1062, 1164, 1608
BsaAI YACGTR 1 cut(s) 1045
BsaBI GATNNNNATC 1 cut(s) 1137
BsaHI GRCGYC 1 cut(s) 677
BsaI GGTCTC 1 cut(s) 191
BsaJI CCNNGG 6 cut(s) 156, 181, 553, 1147, 2380, 2410
BsaWI WCCGGW 5 cut(s) 691, 1562, 1827, 2072, 2231
BsaXI ACNNNNNCTCC 6 cut(s) 524, 554, 2247, 2277, 2459, 2489
Bsc4I CCNNNNNNNGG 5 cut(s) 1148, 1256, 1646, 2412, 2416
Bse118I RCCGGY 2 cut(s) 1695, 1827
Bse1I ACTGG 6 cut(s) 841, 1498, 1562, 2036, 2215, 2505
Bse3DI GCAATG 2 cut(s) 1174, 2227
Bse8I GATNNNNATC 1 cut(s) 1137
BseAI TCCGGA 1 cut(s) 2072
BseBI CCWGG 2 cut(s) 1148, 1392
BseDI CCNNGG 6 cut(s) 156, 181, 553, 1147, 2380, 2410
BseGI GGATG 7 cut(s) 504, 955, 1005, 1192, 1455, 2098, 2254
BseJI GATNNNNATC 1 cut(s) 1137
BseLI CCNNNNNNNGG 5 cut(s) 1148, 1256, 1646, 2412, 2416
BseMI GCAATG 2 cut(s) 1174, 2227
BseMII CTCAG 3 cut(s) 216, 780, 1758
BseNI ACTGG 6 cut(s) 841, 1498, 1562, 2036, 2215, 2505
BseRI GAGGAG 4 cut(s) 190, 418, 505, 2289
BseSI GKGCMC 1 cut(s) 758
BseXI GCAGC 6 cut(s) 294, 639, 1805, 1806, 1999, 2186
BseYI CCCAGC 1 cut(s) 1813
BsgI GTGCAG 2 cut(s) 865, 2298
BshTI ACCGGT 1 cut(s) 1827
BsiHKAI GWGCWC 5 cut(s) 575, 795, 1050, 2323, 2348
BsiHKCI CYCGRG 2 cut(s) 157, 1516
BslFI GGGAC 2 cut(s) 643, 1891
BslI CCNNNNNNNGG 5 cut(s) 1148, 1256, 1646, 2412, 2416
BsmAI GTCTC 3 cut(s) 191, 245, 1560
BsmFI GGGAC 2 cut(s) 643, 1891
Bso31I GGTCTC 1 cut(s) 191
BsoBI CYCGRG 2 cut(s) 157, 1516
Bsp119I TTCGAA 1 cut(s) 2193
Bsp120I GGGCCC 1 cut(s) 754
Bsp1286I GDGCHC 6 cut(s) 575, 758, 795, 1050, 2323, 2348
Bsp13I TCCGGA 1 cut(s) 2072
Bsp1407I TGTACA 1 cut(s) 1189
BspCNI CTCAG 3 cut(s) 215, 781, 1757
BspEI TCCGGA 1 cut(s) 2072
BspLI GGNNCC 8 cut(s) 658, 659, 756, 1059, 1090, 1717, 1879, 1880
BspPI GGATC 6 cut(s) 968, 1052, 1065, 1325, 1402, 2396
BspT104I TTCGAA 1 cut(s) 2193
BspTNI GGTCTC 1 cut(s) 191
BsrBI CCGCTC 2 cut(s) 426, 521
BsrDI GCAATG 2 cut(s) 1174, 2227
BsrFI RCCGGY 2 cut(s) 1695, 1827
BsrGI TGTACA 1 cut(s) 1189
BsrI ACTGG 6 cut(s) 841, 1498, 1562, 2036, 2215, 2505
BssAI RCCGGY 2 cut(s) 1695, 1827
BssECI CCNNGG 6 cut(s) 156, 181, 553, 1147, 2380, 2410
BssNI GRCGYC 1 cut(s) 677
BssSI CACGAG 1 cut(s) 2316
BssT1I CCWWGG 3 cut(s) 181, 2380, 2410
Bst2BI CACGAG 1 cut(s) 2316
Bst2UI CCWGG 2 cut(s) 1148, 1392
Bst4CI ACNGT 9 cut(s) 122, 175, 442, 1034, 1367, 1506, 1947, 2407, 2439
Bst6I CTCTTC 1 cut(s) 2048
BstACI GRCGYC 1 cut(s) 677
BstAUI TGTACA 1 cut(s) 1189
BstBAI YACGTR 1 cut(s) 1045
BstBI TTCGAA 1 cut(s) 2193
BstC8I GCNNGC 2 cut(s) 892, 1697
BstDEI CTNAG 5 cut(s) 202, 266, 789, 1376, 1744
BstF5I GGATG 7 cut(s) 504, 955, 1005, 1192, 1455, 2098, 2254
BstMAI GTCTC 3 cut(s) 191, 245, 1560
BstMWI GCNNNNNNNGC 3 cut(s) 896, 1799, 1819
BstNI CCWGG 2 cut(s) 1148, 1392
BstNSI RCATGY 1 cut(s) 2123
BstSCI CCNGG 5 cut(s) 1060, 1146, 1162, 1390, 1606
BstSFI CTRYAG 1 cut(s) 2457
BstSLI GKGCMC 1 cut(s) 758
BstV1I GCAGC 6 cut(s) 294, 639, 1805, 1806, 1999, 2186
BstV2I GAAGAC 1 cut(s) 67
BstX2I RGATCY 1 cut(s) 1057
BstYI RGATCY 1 cut(s) 1057
BsuI GTATCC 1 cut(s) 920
BtsCI GGATG 7 cut(s) 504, 955, 1005, 1192, 1455, 2098, 2254
BtsIMutI CAGTG 7 cut(s) 786, 848, 1555, 1794, 2064, 2208, 2498
Cac8I GCNNGC 2 cut(s) 892, 1697
CaiI CAGNNNCTG 3 cut(s) 601, 1951, 2500
Cfr10I RCCGGY 2 cut(s) 1695, 1827
Csp6I GTAC 8 cut(s) 118, 547, 784, 1190, 1546, 1597, 1677, 2229
CspAI ACCGGT 1 cut(s) 1827
CviAII CATG 3 cut(s) 672, 946, 2120
CviQI GTAC 8 cut(s) 118, 547, 784, 1190, 1546, 1597, 1677, 2229
DdeI CTNAG 5 cut(s) 202, 266, 789, 1376, 1744
DraIII CACNNNGTG 1 cut(s) 1202
DriI GACNNNNNGTC 1 cut(s) 681
Eam1104I CTCTTC 1 cut(s) 2048
Eam1105I GACNNNNNGTC 1 cut(s) 681
EarI CTCTTC 1 cut(s) 2048
EciI GGCGGA 2 cut(s) 741, 2519
Ecl136II GAGCTC 2 cut(s) 793, 2346
Eco130I CCWWGG 3 cut(s) 181, 2380, 2410
Eco147I AGGCCT 2 cut(s) 1478, 2159
Eco24I GRGCYC 3 cut(s) 758, 795, 2348
Eco31I GGTCTC 1 cut(s) 191
Eco47I GGWCC 6 cut(s) 212, 496, 537, 657, 1560, 1878
Eco53kI GAGCTC 2 cut(s) 793, 2346
Eco57I CTGAAG 1 cut(s) 2504
Eco88I CYCGRG 2 cut(s) 157, 1516
EcoICRI GAGCTC 2 cut(s) 793, 2346
EcoO109I RGGNCCY 5 cut(s) 537, 657, 1716, 1878, 1893
EcoRI GAATTC 3 cut(s) 270, 1315, 1753
EcoRII CCWGG 2 cut(s) 1146, 1390
EcoT14I CCWWGG 3 cut(s) 181, 2380, 2410
EcoT38I GRGCYC 3 cut(s) 758, 795, 2348
ErhI CCWWGG 3 cut(s) 181, 2380, 2410
FaeI CATG 3 cut(s) 675, 949, 2123
FalI AAGNNNNNCTT 4 cut(s) 560, 592, 694, 726
FaqI GGGAC 2 cut(s) 643, 1891
FatI CATG 3 cut(s) 671, 945, 2119
FauI CCCGC 3 cut(s) 335, 428, 814
FbaI TGATCA 1 cut(s) 2104
FblI GTMKAC 2 cut(s) 802, 1173
Fnu4HI GCNGC 8 cut(s) 308, 311, 424, 628, 1794, 1820, 1988, 2175
FokI GGATG 7 cut(s) 491, 962, 1012, 1179, 1462, 2105, 2261
FriOI GRGCYC 3 cut(s) 758, 795, 2348
Fsp4HI GCNGC 8 cut(s) 308, 311, 424, 628, 1794, 1820, 1988, 2175
FspBI CTAG 8 cut(s) 587, 906, 992, 1098, 1238, 1712, 2442, 2521
GluI GCNGC 8 cut(s) 308, 311, 424, 628, 1794, 1820, 1988, 2175
GsaI CCCAGC 1 cut(s) 1817
GsuI CTGGAG 1 cut(s) 1377
Hin1I GRCGYC 1 cut(s) 677
Hin1II CATG 3 cut(s) 675, 949, 2123
HincII GTYRAC 4 cut(s) 178, 736, 803, 982
HindII GTYRAC 4 cut(s) 178, 736, 803, 982
HpaI GTTAAC 1 cut(s) 178
HphI GGTGA 9 cut(s) 223, 352, 373, 403, 409, 706, 784, 1016, 1968
HpyAV CCTTC 7 cut(s) 493, 586, 675, 1031, 1099, 1801, 2123
HpyCH4III ACNGT 9 cut(s) 122, 175, 442, 1034, 1367, 1506, 1947, 2407, 2439
HpyCH4IV ACGT 3 cut(s) 677, 1044, 2115
HpyF10VI GCNNNNNNNGC 3 cut(s) 896, 1799, 1819
HpyF3I CTNAG 5 cut(s) 202, 266, 789, 1376, 1744
HpySE526I ACGT 3 cut(s) 677, 1044, 2115
Hsp92I GRCGYC 1 cut(s) 677
Hsp92II CATG 3 cut(s) 675, 949, 2123
KflI GGGWCCC 2 cut(s) 657, 1878
Kpn2I TCCGGA 1 cut(s) 2072
KroI GCCGGC 1 cut(s) 1695
KroNI GCCGGC 1 cut(s) 1697
Ksp22I TGATCA 1 cut(s) 2104
KspAI GTTAAC 1 cut(s) 178
LmnI GCTCC 8 cut(s) 203, 304, 431, 588, 778, 1649, 1994, 2479
Lsp1109I GCAGC 6 cut(s) 294, 639, 1805, 1806, 1999, 2186
LweI GCATC 4 cut(s) 804, 940, 1805, 2083
MaeI CTAG 8 cut(s) 587, 906, 992, 1098, 1238, 1712, 2442, 2521
MaeII ACGT 3 cut(s) 677, 1044, 2115
MaeIII GTNAC 8 cut(s) 358, 706, 854, 1417, 1452, 1974, 2083, 2206
MbiI CCGCTC 2 cut(s) 426, 521
MfeI CAATTG 1 cut(s) 1884
MflI RGATCY 1 cut(s) 1057
MhlI GDGCHC 6 cut(s) 575, 758, 795, 1050, 2323, 2348
MlyI GAGTC 4 cut(s) 143, 278, 592, 1620
MmeI TCCRAC 7 cut(s) 492, 1361, 1627, 1682, 2366, 2397, 2457
MroI TCCGGA 1 cut(s) 2072
MroNI GCCGGC 1 cut(s) 1695
MseI TTAA 5 cut(s) 177, 492, 1227, 2375, 2427
MslI CAYNNNNRTG 2 cut(s) 1853, 2057
MspR9I CCNGG 5 cut(s) 1062, 1148, 1164, 1392, 1608
MunI CAATTG 1 cut(s) 1884
MvaI CCWGG 2 cut(s) 1148, 1392
MwoI GCNNNNNNNGC 3 cut(s) 896, 1799, 1819
NaeI GCCGGC 1 cut(s) 1697
NciI CCSGG 3 cut(s) 1062, 1164, 1608
NgoMIV GCCGGC 1 cut(s) 1695
NlaIII CATG 3 cut(s) 675, 949, 2123
NlaIV GGNNCC 8 cut(s) 658, 659, 756, 1059, 1090, 1717, 1879, 1880
NmuCI GTSAC 3 cut(s) 358, 1974, 2206
NspI RCATGY 1 cut(s) 2123
NspV TTCGAA 1 cut(s) 2193
OliI CACNNNNGTG 1 cut(s) 2057
PaeR7I CTCGAG 1 cut(s) 1516
PceI AGGCCT 2 cut(s) 1478, 2159
PcsI WCGNNNNNNNCGW 1 cut(s) 2314
PdiI GCCGGC 1 cut(s) 1697
PfeI GAWTC 7 cut(s) 152, 634, 834, 1705, 1784, 2069, 2491
PflMI CCANNNNNTGG 1 cut(s) 1646
PfoI TCCNGGA 1 cut(s) 1390
PinAI ACCGGT 1 cut(s) 1827
PkrI GCNGC 8 cut(s) 309, 312, 425, 629, 1795, 1821, 1989, 2176
PleI GAGTC 4 cut(s) 142, 278, 592, 1620
PpsI GAGTC 4 cut(s) 142, 278, 592, 1620
Ppu21I YACGTR 1 cut(s) 1045
PpuMI RGGWCCY 3 cut(s) 537, 657, 1878
PsiI TTATAA 2 cut(s) 126, 714
Psp124BI GAGCTC 2 cut(s) 795, 2348
Psp5II RGGWCCY 3 cut(s) 537, 657, 1878
Psp6I CCWGG 2 cut(s) 1146, 1390
PspFI CCCAGC 1 cut(s) 1813
PspGI CCWGG 2 cut(s) 1146, 1390
PspN4I GGNNCC 8 cut(s) 658, 659, 756, 1059, 1090, 1717, 1879, 1880
PspOMI GGGCCC 1 cut(s) 754
PspPPI RGGWCCY 3 cut(s) 537, 657, 1878
PstNI CAGNNNCTG 3 cut(s) 601, 1951, 2500
PsuI RGATCY 1 cut(s) 1057
RsaI GTAC 8 cut(s) 119, 548, 785, 1191, 1547, 1598, 1678, 2230
RsaNI GTAC 8 cut(s) 118, 547, 784, 1190, 1546, 1597, 1677, 2229
RseI CAYNNNNRTG 2 cut(s) 1853, 2057
SacI GAGCTC 2 cut(s) 795, 2348
SalI GTCGAC 1 cut(s) 801
SaqAI TTAA 5 cut(s) 177, 492, 1227, 2375, 2427
SatI GCNGC 8 cut(s) 308, 311, 424, 628, 1794, 1820, 1988, 2175
SchI GAGTC 4 cut(s) 143, 278, 592, 1620
ScrFI CCNGG 5 cut(s) 1062, 1148, 1164, 1392, 1608
SduI GDGCHC 6 cut(s) 575, 758, 795, 1050, 2323, 2348
SfaNI GCATC 4 cut(s) 804, 940, 1805, 2083
SfcI CTRYAG 1 cut(s) 2457
Sfr274I CTCGAG 1 cut(s) 1516
SfuI TTCGAA 1 cut(s) 2193
SinI GGWCC 6 cut(s) 212, 496, 537, 657, 1560, 1878
SlaI CTCGAG 1 cut(s) 1516
SmiMI CAYNNNNRTG 2 cut(s) 1853, 2057
SmlI CTYRAG 2 cut(s) 875, 1516
SmoI CTYRAG 2 cut(s) 875, 1516
SseBI AGGCCT 2 cut(s) 1478, 2159
SspMI CTAG 8 cut(s) 587, 906, 992, 1098, 1238, 1712, 2442, 2521
SstI GAGCTC 2 cut(s) 795, 2348
StuI AGGCCT 2 cut(s) 1478, 2159
StyD4I CCNGG 5 cut(s) 1060, 1146, 1162, 1390, 1606
StyI CCWWGG 3 cut(s) 181, 2380, 2410
TaaI ACNGT 9 cut(s) 122, 175, 442, 1034, 1367, 1506, 1947, 2407, 2439
TaiI ACGT 3 cut(s) 680, 1047, 2118
TaqI TCGA 9 cut(s) 132, 447, 802, 1517, 1523, 2037, 2193, 2265, 2355
TatI WGTACW 3 cut(s) 783, 1189, 1545
TauI GCSGC 2 cut(s) 313, 426
TfiI GAWTC 7 cut(s) 152, 634, 834, 1705, 1784, 2069, 2491
Tru1I TTAA 5 cut(s) 177, 492, 1227, 2375, 2427
Tru9I TTAA 5 cut(s) 177, 492, 1227, 2375, 2427
TscAI CASTG 7 cut(s) 793, 848, 1562, 1794, 2064, 2215, 2505
TseFI GTSAC 3 cut(s) 358, 1974, 2206
TseI GCWGC 6 cut(s) 307, 627, 1793, 1819, 1987, 2174
Tsp45I GTSAC 3 cut(s) 358, 1974, 2206
TspDTI ATGAA 7 cut(s) 475, 1016, 1111, 1289, 1293, 1424, 1698
TspGWI ACGGA 3 cut(s) 296, 346, 947
TspRI CASTG 7 cut(s) 793, 848, 1562, 1794, 2064, 2215, 2505
Van91I CCANNNNNTGG 1 cut(s) 1646
VpaK11BI GGWCC 6 cut(s) 212, 496, 537, 657, 1560, 1878
XapI RAATTY 8 cut(s) 270, 349, 1288, 1315, 1618, 1753, 1999, 2366
XbaI TCTAGA 1 cut(s) 1237
XceI RCATGY 1 cut(s) 2123
XcmI CCANNNNNNNNNTGG 1 cut(s) 848
XhoI CTCGAG 1 cut(s) 1516
XmiI GTMKAC 2 cut(s) 802, 1173
XspI CTAG 8 cut(s) 587, 906, 992, 1098, 1238, 1712, 2442, 2521
ZraI GACGTC 1 cut(s) 678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.