Rh5BG135400

Belongs to the glycosyl hydrolase 31 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
13439547 .. 13444847
5301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG135400.1

Sequence Viewer

Length: 2814 bp
ATGAAAGCTATATATATATATTCTCATTTCTATCTTATTATCCTTGAACTCCTTCTAATCCAAAATCCAGTATATAAGCTTGCTTTAGGGTTCATTCACATTACCCCAACTAGAAGAAATTCCACAACTATGGAAAGAAACAGATCAAATTATACACCAAAAGCAATATTGTTTCGTCATCTTCTACCATTCTTCTTCTTCTTGTCTCTGCTTGATTGTATAGTTGCAGAAGAACCAGTTGGGTATGGATACAAAGTCGAGTCTGTCAATTCTGATTCCTCCGGGAAGACATTGACGGCTAATCTTGGCCTGATCAACAGCTCCTCAGTCTACGGACCTGACATCCCAAATCTCAAGCTTTATGCCAGCTATGAAACCAAAGAAAGACTAAGAATTCGAATAACGGACTCGAATGACCAAAGATGGGAAATCCCACAAGACCTTCTCCCACGCCAAACTCCACAAGCATCGCACCATTCCATCCCCGAAAACGACCTCATTTTCACACTCCACAACACCACCCCATTCGGCTTCACCGTCACCCGCCGTTCCTCCAACGACGTCGTATTCGACACCACCCCAAACCCCTCCAACCCTTCCTCCATCCTCGTTTTCAAGGACCAATACATCCAGCTTTCCTCCTCTCTCCCGGAAACCCGGTCTTCCATCTACGGCCTCGGTGAACACACCAAACCCTCCTTCAAGCTCCAAACCCATCAGACTCTGACACTCTGGACGGCCGACATTGCCAGCGCCAACCTCGACCTCAACCTCTATGGGTCCCACCCGTTTTACATGGACGTGAGGTCACCGTCCGGTGACGGAAAAGTTACCGCGGGAACCACTCATGGAGTGTTGCTATTGAATAGTAATGGCATGGATGTAAATTACGACGGTGACAGGGTTACTTATAAGGTGATTGGTGGAGTTGTGGACTTGTATTTCTTCTCGGGCCCGACGCCCGAATTGGTGATGGAGCAGTACACGGAGCTCATTGGCCGACCGGCCCCGATGCCCTACTGGTCTTTCGGATTCCACCAGTGTAGATATGGTTACAAGGATGTTGCTGATCTTGAGGGGGTGGTTGCTGGTTATGCAAATGCTAGCATCCCTCTTGAAGTTATGTGGACGGACATTGACTACATGGATGCTTACAAGGATTTCACTCTTGATCCCATCAACTTTCCATTGGACAAGATGCAAAACTTCACAAACACCCTTCACCAAAATGGCCAGAAATATGTGCTCATCTTGGACCCTGGTATTAGTATAAATGAGAGCTATGGAACTTACATCAGAGGGAAGGAAGCAGATATATACATAAAACGTGATGGCATTCCTTACCAAGGAAATGTATGGCCTGGTGATGTTTACTATCCTGATTTTGTACATCCACAAAGTGAACAATTTTGGGCTAATGAGATCAAACTATTTCAAGACCAACTAGCTTTTGATGGTCTCTGGCTTGATATGAATGAGGTATCCAATTTTATAACATCTCCTCCTACTCCGAACTCCACACTTGATGATCCACCTTACAAAATCAATGATTCCGGAGTCCAGCGTCCGATCATTAATAACACTGTTCCGGCATCAGCTCTACACTTTGGTAATATAACAGAGTATAACGTCCATAACCTATATGGGTTCTTGGAATCTAAAGCAACACACCAGGGGTTGATCAATGTTACTGGTAAGAGACCATTTATACTTGCTAGATCAACCTTTATAAGCTCTGGTAAGTACACAGCACACTGGACTGGAGACAATGCAGCAAGATGGAGTGACTTGGCATACACAATTCCAGGCATTTTGAATTTTGGACTCTTCGGAGTTCCAATGGTTGGAGCTGATATATGTGGTTTCATTGGGGATACTAATGAAGAACTCTGCCGGCGTTGGATTCAGCTAGGGGCCTTTTACCCGTTTTCAAGAGATCATTCAGAAAAGTCTACGATCCGCCAAGAGCTCTATGTTTGGGATTCAGTCGCTGCATCAGCAAGGAAGGTGCTAGGCCTCCGTTACCGGTTGCTCCCCTTGTTCTACACATCAATGTATCAGGCACACAAAAAAGGGACCCCCATTGCAAGGCCCCTTTTCTTCTCGTTTCCTGAAGATACCAATACATACGGCATCAATTCACAGTTCTTGATTGGTAAATGTATGATGGTGTCACCTGTGTTGCAGGAAGGAGCAAATTCAGTTCATGCATATTTTCCTGCTGGAAACTGGTTTGATCTCTTCAACTACTCCAGATCAGTGAGTGTAGACTCTGGAGAGTATGTTACGTTGGATGCACCGCCTGATCATATCAATGTACATGTCCGTGAAGGAAACATATTGGCCTTGCAAGGAGAGGCCTTGACAACACAAGCAGCTCGGAAGACTGCATTCGAACTCTTGGTGGTCATTAGTGTTAGCGGAGAGAGCACTGGAGAAGTGTTCTTGGATGATGGAGAGGAAGTCGAAATGGGAGGAGAGGGAGGGAAGTGGAGTTTCGTGAGGTTTCGTTCTGCACTAGCACAAAATGGAAGTCTAGTTTTGAGCTCAAAGGTCGAAAATGGAGAATTTGCATTAAGCCAAGGTTGGATCATTGATAAAATTACCGTCCTTGGGTTGGACAAAGTTAATGCAACAGATGGGTATACATTGAGCATTACTAAAGGAGCAAAGTTGAAAGAAAACACAAATGTTAAGGCCAACTTTCACAGTTATGAGCGTTTTGTAAAGGTAGAGTCCAGTGTATCCCTTCCTATAGGAAAGGAGTTTGAGTTGGAGCTGAAGCCGAATCAGATACTGGAGAAAACACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

937

Amino Acids

105.16

Weight (kDa)

5.5

Isoelectric Point (pI)

34.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gal_mutarotas_2 PF13802 130 - 290 3.4e-11 Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd PF01055 335 - 683 2.4e-120 Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd PF21365 692 - 781 2.4e-25 Glycosyl hydrolase family 31 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 912, 1493, 1730
AatII GACGTC 1 cut(s) 564
AccB7I CCANNNNNTGG 1 cut(s) 1844
AccI GTMKAC 4 cut(s) 330, 1952, 2268, 2645
AccII CGCG 1 cut(s) 836
AccIII TCCGGA 1 cut(s) 1553
AciI CCGC 6 cut(s) 544, 834, 836, 1960, 2300, 2421
AclWI GGATC 4 cut(s) 1166, 1523, 1951, 2597
AcoI YGGCCR 3 cut(s) 738, 997, 1231
AcsI RAATTY 5 cut(s) 118, 393, 1816, 2197, 2567
AcuI CTGAAG 2 cut(s) 2133, 2801
AcyI GRCGYC 2 cut(s) 561, 959
AdeI CACNNNGTG 1 cut(s) 1400
AfaI GTAC 4 cut(s) 983, 1389, 1745, 2319
AfiI CCNNNNNNNGG 6 cut(s) 424, 1346, 1844, 2088, 2613, 2617
AflIII ACRYGT 1 cut(s) 2320
AgeI ACCGGT 1 cut(s) 2025
AhdI GACNNNNNGTC 1 cut(s) 805
AjiI CACGTC 1 cut(s) 802
AjnI CCWGG 4 cut(s) 1258, 1360, 1671, 1804
AjuI GAANNNNNNNTTGG 4 cut(s) 222, 254, 683, 715
Alw21I GWGCWC 5 cut(s) 993, 1248, 1971, 2432, 2549
Alw26I GTCTC 4 cut(s) 210, 1463, 1693, 1758
AlwI GGATC 4 cut(s) 1166, 1523, 1951, 2597
AlwNI CAGNNNCTG 3 cut(s) 724, 1991, 2797
Ama87I CYCGRG 1 cut(s) 949
Aor13HI TCCGGA 1 cut(s) 1553
ApaI GGGCCC 1 cut(s) 956
ApeKI GCWGC 3 cut(s) 1772, 1991, 2375
ApoI RAATTY 5 cut(s) 118, 393, 1816, 2197, 2567
ArsI GACNNNNNNTTYG 6 cut(s) 378, 410, 551, 583, 2518, 2550
AseI ATTAAT 1 cut(s) 1575
AsiGI ACCGGT 1 cut(s) 2025
Asp700I GAANNNNTTC 2 cut(s) 51, 118
AspLEI GCGC 1 cut(s) 755
AsuC2I CCSGG 3 cut(s) 283, 650, 658
AsuII TTCGAA 2 cut(s) 397, 2394
AsuNHI GCTAGC 1 cut(s) 1103
AvaI CYCGRG 1 cut(s) 949
AvaII GGWCC 5 cut(s) 335, 619, 780, 1255, 2076
BaeGI GKGCMC 1 cut(s) 956
BalI TGGCCA 1 cut(s) 1233
BanII GRGCYC 4 cut(s) 956, 993, 1971, 2549
BbsI GAAGAC 3 cut(s) 293, 654, 2390
Bbv12I GWGCWC 5 cut(s) 993, 1248, 1971, 2432, 2549
BbvI GCAGC 3 cut(s) 1784, 1978, 2387
BceAI ACGGC 5 cut(s) 312, 531, 688, 753, 2146
BciT130I CCWGG 4 cut(s) 1260, 1362, 1673, 1806
BciVI GTATCC 4 cut(s) 242, 1492, 1867, 2755
BclI TGATCA 3 cut(s) 312, 1680, 2305
BcnI CCSGG 3 cut(s) 283, 650, 658
BcoDI GTCTC 4 cut(s) 210, 1463, 1693, 1758
BfaI CTAG 9 cut(s) 111, 1104, 1445, 1716, 1910, 2012, 2519, 2537, 2812
BfmI CTRYAG 1 cut(s) 2754
BfoI RGCGCY 1 cut(s) 756
BfuI GTATCC 4 cut(s) 242, 1492, 1867, 2755
BisI GCNGC 3 cut(s) 1773, 1992, 2376
BlsI GCNGC 3 cut(s) 1774, 1993, 2377
Bme1390I CCNGG 7 cut(s) 283, 650, 658, 1260, 1362, 1673, 1806
Bme18I GGWCC 5 cut(s) 335, 619, 780, 1255, 2076
BmeRI GACNNNNNGTC 1 cut(s) 805
BmeT110I CYCGRG 1 cut(s) 949
BmgBI CACGTC 1 cut(s) 802
BmrFI CCNGG 7 cut(s) 283, 650, 658, 1260, 1362, 1673, 1806
BmsI GCATC 9 cut(s) 476, 1002, 1116, 1138, 1188, 1601, 2003, 2142, 2284
BmtI GCTAGC 1 cut(s) 1107
BpiI GAAGAC 3 cut(s) 293, 654, 2390
BpmI CTGGAG 4 cut(s) 1782, 2236, 2295, 2454
Bpu14I TTCGAA 2 cut(s) 397, 2394
BpuEI CTTGAG 2 cut(s) 338, 1094
BpuMI CCSGG 3 cut(s) 283, 650, 658
BsaHI GRCGYC 2 cut(s) 561, 959
BsaI GGTCTC 2 cut(s) 1463, 1693
BsaJI CCNNGG 7 cut(s) 676, 834, 1258, 1345, 1672, 2581, 2611
BsaWI WCCGGW 3 cut(s) 815, 1553, 2025
Bsc4I CCNNNNNNNGG 6 cut(s) 424, 1346, 1844, 2088, 2613, 2617
Bse118I RCCGGY 3 cut(s) 1003, 1893, 2025
Bse3DI GCAATG 2 cut(s) 744, 2082
BseAI TCCGGA 1 cut(s) 1553
BseBI CCWGG 4 cut(s) 1260, 1362, 1673, 1806
BseDI CCNNGG 7 cut(s) 676, 834, 1258, 1345, 1672, 2581, 2611
BseLI CCNNNNNNNGG 6 cut(s) 424, 1346, 1844, 2088, 2613, 2617
BseMI GCAATG 2 cut(s) 744, 2082
BseMII CTCAG 1 cut(s) 339
BseRI GAGGAG 4 cut(s) 313, 631, 1491, 2490
BseSI GKGCMC 1 cut(s) 956
BseX3I CGGCCG 1 cut(s) 738
BseXI GCAGC 3 cut(s) 1784, 1978, 2387
BsgI GTGCAG 1 cut(s) 2499
Bsh1236I CGCG 1 cut(s) 836
Bsh1285I CGRYCG 2 cut(s) 741, 1004
BshTI ACCGGT 1 cut(s) 2025
BsiEI CGRYCG 2 cut(s) 741, 1004
BsiHKAI GWGCWC 5 cut(s) 993, 1248, 1971, 2432, 2549
BsiHKCI CYCGRG 1 cut(s) 949
BsiSI CCGG 9 cut(s) 282, 650, 658, 816, 1004, 1554, 1589, 1894, 2026
BslFI GGGAC 2 cut(s) 766, 2089
BslI CCNNNNNNNGG 6 cut(s) 424, 1346, 1844, 2088, 2613, 2617
BsmAI GTCTC 4 cut(s) 210, 1463, 1693, 1758
BsmFI GGGAC 2 cut(s) 766, 2089
BsmI GAATGC 2 cut(s) 1335, 2390
Bso31I GGTCTC 2 cut(s) 1463, 1693
BsoBI CYCGRG 1 cut(s) 949
Bsp119I TTCGAA 2 cut(s) 397, 2394
Bsp120I GGGCCC 1 cut(s) 952
Bsp1286I GDGCHC 6 cut(s) 956, 993, 1248, 1971, 2432, 2549
Bsp13I TCCGGA 1 cut(s) 1553
Bsp1407I TGTACA 2 cut(s) 1387, 2317
BspACI CCGC 6 cut(s) 544, 834, 836, 1960, 2300, 2421
BspCNI CTCAG 1 cut(s) 338
BspEI TCCGGA 1 cut(s) 1553
BspFNI CGCG 1 cut(s) 836
BspOI GCTAGC 1 cut(s) 1107
BspPI GGATC 4 cut(s) 1166, 1523, 1951, 2597
BspT104I TTCGAA 2 cut(s) 397, 2394
BspTNI GGTCTC 2 cut(s) 1463, 1693
BsrDI GCAATG 2 cut(s) 744, 2082
BsrFI RCCGGY 3 cut(s) 1003, 1893, 2025
BsrGI TGTACA 2 cut(s) 1387, 2317
BssAI RCCGGY 3 cut(s) 1003, 1893, 2025
BssECI CCNNGG 7 cut(s) 676, 834, 1258, 1345, 1672, 2581, 2611
BssNAI GTATAC 1 cut(s) 2646
BssNI GRCGYC 2 cut(s) 561, 959
BssT1I CCWWGG 3 cut(s) 1345, 2581, 2611
Bst1107I GTATAC 1 cut(s) 2646
Bst2UI CCWGG 4 cut(s) 1260, 1362, 1673, 1806
Bst4CI ACNGT 7 cut(s) 538, 813, 896, 1585, 2145, 2608, 2711
Bst6I CTCTTC 2 cut(s) 1832, 2246
BstACI GRCGYC 2 cut(s) 561, 959
BstAUI TGTACA 2 cut(s) 1387, 2317
BstBI TTCGAA 2 cut(s) 397, 2394
BstC8I GCNNGC 5 cut(s) 81, 367, 751, 1105, 1895
BstDEI CTNAG 2 cut(s) 325, 389
BstDSI CCRYGG 1 cut(s) 834
BstEII GGTNACC 1 cut(s) 807
BstENI CCTNNNNNAGG 1 cut(s) 1344
BstFNI CGCG 1 cut(s) 836
BstH2I RGCGCY 1 cut(s) 756
BstHHI GCGC 1 cut(s) 755
BstMAI GTCTC 4 cut(s) 210, 1463, 1693, 1758
BstMCI CGRYCG 2 cut(s) 741, 1004
BstMWI GCNNNNNNNGC 4 cut(s) 746, 1094, 1997, 2427
BstNI CCWGG 4 cut(s) 1260, 1362, 1673, 1806
BstNSI RCATGY 1 cut(s) 2324
BstPI GGTNACC 1 cut(s) 807
BstSCI CCNGG 7 cut(s) 281, 648, 656, 1258, 1360, 1671, 1804
BstSFI CTRYAG 1 cut(s) 2754
BstSLI GKGCMC 1 cut(s) 956
BstUI CGCG 1 cut(s) 836
BstV1I GCAGC 3 cut(s) 1784, 1978, 2387
BstV2I GAAGAC 3 cut(s) 293, 654, 2390
BstXI CCANNNNNNTGG 1 cut(s) 130
BstZ17I GTATAC 1 cut(s) 2646
BstZI CGGCCG 1 cut(s) 738
BsuI GTATCC 4 cut(s) 242, 1492, 1867, 2755
BtgI CCRYGG 1 cut(s) 834
BtgZI GCGATG 1 cut(s) 453
BtrI CACGTC 1 cut(s) 802
BtsIMutI CAGTG 6 cut(s) 1046, 1581, 1753, 2265, 2430, 2746
Cac8I GCNNGC 5 cut(s) 81, 367, 751, 1105, 1895
CaiI CAGNNNCTG 3 cut(s) 724, 1991, 2797
CfoI GCGC 1 cut(s) 755
Cfr10I RCCGGY 3 cut(s) 1003, 1893, 2025
Cfr42I CCGCGG 1 cut(s) 837
CseI GACGC 2 cut(s) 967, 1553
Csp6I GTAC 4 cut(s) 982, 1388, 1744, 2318
CspAI ACCGGT 1 cut(s) 2025
CviAII CATG 6 cut(s) 796, 848, 877, 1144, 2207, 2321
CviQI GTAC 4 cut(s) 982, 1388, 1744, 2318
DdeI CTNAG 2 cut(s) 325, 389
DraIII CACNNNGTG 1 cut(s) 1400
DriI GACNNNNNGTC 1 cut(s) 805
EaeI YGGCCR 3 cut(s) 738, 997, 1231
EagI CGGCCG 1 cut(s) 738
Eam1104I CTCTTC 2 cut(s) 1832, 2246
Eam1105I GACNNNNNGTC 1 cut(s) 805
EarI CTCTTC 2 cut(s) 1832, 2246
EciI GGCGGA 1 cut(s) 1949
Ecl136II GAGCTC 3 cut(s) 991, 1969, 2547
EclXI CGGCCG 1 cut(s) 738
Eco130I CCWWGG 3 cut(s) 1345, 2581, 2611
Eco147I AGGCCT 2 cut(s) 2016, 2360
Eco24I GRGCYC 4 cut(s) 956, 993, 1971, 2549
Eco31I GGTCTC 2 cut(s) 1463, 1693
Eco47I GGWCC 5 cut(s) 335, 619, 780, 1255, 2076
Eco52I CGGCCG 1 cut(s) 738
Eco53kI GAGCTC 3 cut(s) 991, 1969, 2547
Eco57I CTGAAG 2 cut(s) 2133, 2801
Eco88I CYCGRG 1 cut(s) 949
Eco91I GGTNACC 1 cut(s) 807
EcoICRI GAGCTC 3 cut(s) 991, 1969, 2547
EcoNI CCTNNNNNAGG 1 cut(s) 1344
EcoO109I RGGNCCY 4 cut(s) 780, 1914, 2076, 2091
EcoO65I GGTNACC 1 cut(s) 807
EcoRI GAATTC 1 cut(s) 393
EcoRII CCWGG 4 cut(s) 1258, 1360, 1671, 1804
EcoT14I CCWWGG 3 cut(s) 1345, 2581, 2611
EcoT22I ATGCAT 1 cut(s) 2212
EcoT38I GRGCYC 4 cut(s) 956, 993, 1971, 2549
ErhI CCWWGG 3 cut(s) 1345, 2581, 2611
FaeI CATG 6 cut(s) 799, 851, 880, 1147, 2210, 2324
FalI AAGNNNNNCTT 2 cut(s) 2687, 2719
FaqI GGGAC 2 cut(s) 766, 2089
FatI CATG 6 cut(s) 795, 847, 876, 1143, 2206, 2320
FauI CCCGC 2 cut(s) 551, 829
FbaI TGATCA 3 cut(s) 312, 1680, 2305
FblI GTMKAC 4 cut(s) 330, 1952, 2268, 2645
Fnu4HI GCNGC 3 cut(s) 1773, 1992, 2376
FriOI GRGCYC 4 cut(s) 956, 993, 1971, 2549
Fsp4HI GCNGC 3 cut(s) 1773, 1992, 2376
FspBI CTAG 9 cut(s) 111, 1104, 1445, 1716, 1910, 2012, 2519, 2537, 2812
GlaI GCGC 1 cut(s) 754
GluI GCNGC 3 cut(s) 1773, 1992, 2376
GsuI CTGGAG 4 cut(s) 1782, 2236, 2295, 2454
HaeII RGCGCY 1 cut(s) 756
HapII CCGG 9 cut(s) 282, 650, 658, 816, 1004, 1554, 1589, 1894, 2026
HgaI GACGC 2 cut(s) 967, 1553
HhaI GCGC 1 cut(s) 755
Hin1I GRCGYC 2 cut(s) 561, 959
Hin1II CATG 6 cut(s) 799, 851, 880, 1147, 2210, 2324
Hin6I GCGC 1 cut(s) 753
HinP1I GCGC 1 cut(s) 753
HindIII AAGCTT 2 cut(s) 77, 356
HpaII CCGG 9 cut(s) 282, 650, 658, 816, 1004, 1554, 1589, 1894, 2026
Hpy99I CGWCG 4 cut(s) 563, 566, 896, 961
HpyCH4III ACNGT 7 cut(s) 538, 813, 896, 1585, 2145, 2608, 2711
HpyCH4IV ACGT 5 cut(s) 561, 801, 1327, 1629, 2288
HpyF10VI GCNNNNNNNGC 4 cut(s) 746, 1094, 1997, 2427
HpyF3I CTNAG 2 cut(s) 325, 389
HpySE526I ACGT 5 cut(s) 561, 801, 1327, 1629, 2288
Hsp92I GRCGYC 2 cut(s) 561, 959
Hsp92II CATG 6 cut(s) 799, 851, 880, 1147, 2210, 2324
HspAI GCGC 1 cut(s) 753
KflI GGGWCCC 2 cut(s) 780, 2076
Kpn2I TCCGGA 1 cut(s) 1553
KroI GCCGGC 1 cut(s) 1893
KroNI GCCGGC 1 cut(s) 1895
Ksp22I TGATCA 3 cut(s) 312, 1680, 2305
KspI CCGCGG 1 cut(s) 837
LmnI GCTCC 9 cut(s) 326, 711, 976, 988, 1847, 2037, 2192, 2666, 2776
Lsp1109I GCAGC 3 cut(s) 1784, 1978, 2387
LweI GCATC 9 cut(s) 476, 1002, 1116, 1138, 1188, 1601, 2003, 2142, 2284
MaeI CTAG 9 cut(s) 111, 1104, 1445, 1716, 1910, 2012, 2519, 2537, 2812
MaeII ACGT 5 cut(s) 561, 801, 1327, 1629, 2288
MhlI GDGCHC 6 cut(s) 956, 993, 1248, 1971, 2432, 2549
MlsI TGGCCA 1 cut(s) 1233
MluNI TGGCCA 1 cut(s) 1233
MlyI GAGTC 7 cut(s) 269, 401, 715, 1566, 1818, 2264, 2744
MmeI TCCRAC 8 cut(s) 579, 615, 1825, 1880, 2271, 2567, 2598, 2754
Mox20I TGGCCA 1 cut(s) 1233
Mph1103I ATGCAT 1 cut(s) 2212
MroI TCCGGA 1 cut(s) 1553
MroNI GCCGGC 1 cut(s) 1893
MroXI GAANNNNTTC 2 cut(s) 51, 118
MscI TGGCCA 1 cut(s) 1233
MseI TTAA 4 cut(s) 1575, 2576, 2628, 2694
MslI CAYNNNNRTG 7 cut(s) 128, 800, 1227, 2051, 2313, 2325, 2712
Msp20I TGGCCA 1 cut(s) 1233
MspA1I CMGCKG 1 cut(s) 836
MspI CCGG 9 cut(s) 282, 650, 658, 816, 1004, 1554, 1589, 1894, 2026
MspR9I CCNGG 7 cut(s) 283, 650, 658, 1260, 1362, 1673, 1806
Mva1269I GAATGC 2 cut(s) 1335, 2390
MvaI CCWGG 4 cut(s) 1260, 1362, 1673, 1806
MvnI CGCG 1 cut(s) 836
MwoI GCNNNNNNNGC 4 cut(s) 746, 1094, 1997, 2427
NaeI GCCGGC 1 cut(s) 1895
NciI CCSGG 3 cut(s) 283, 650, 658
NgoMIV GCCGGC 1 cut(s) 1893
NheI GCTAGC 1 cut(s) 1103
NlaIII CATG 6 cut(s) 799, 851, 880, 1147, 2210, 2324
NmuCI GTSAC 6 cut(s) 538, 807, 818, 896, 1784, 2172
NsiI ATGCAT 1 cut(s) 2212
NspI RCATGY 1 cut(s) 2324
NspV TTCGAA 2 cut(s) 397, 2394
PceI AGGCCT 2 cut(s) 2016, 2360
PciI ACATGT 1 cut(s) 2320
PcsI WCGNNNNNNNCGW 2 cut(s) 534, 567
PctI GAATGC 2 cut(s) 1335, 2390
PdiI GCCGGC 1 cut(s) 1895
PdmI GAANNNNTTC 2 cut(s) 51, 118
PfeI GAWTC 7 cut(s) 275, 1032, 1550, 1655, 1903, 1982, 2788
PflMI CCANNNNNTGG 1 cut(s) 1844
PfoI TCCNGGA 2 cut(s) 281, 648
PinAI ACCGGT 1 cut(s) 2025
PkrI GCNGC 3 cut(s) 1774, 1993, 2377
PleI GAGTC 7 cut(s) 268, 401, 715, 1565, 1818, 2264, 2743
PpsI GAGTC 7 cut(s) 268, 401, 715, 1565, 1818, 2264, 2743
PpuMI RGGWCCY 2 cut(s) 780, 2076
PscI ACATGT 1 cut(s) 2320
PshBI ATTAAT 1 cut(s) 1575
PsiI TTATAA 3 cut(s) 912, 1493, 1730
Psp124BI GAGCTC 3 cut(s) 993, 1971, 2549
Psp5II RGGWCCY 2 cut(s) 780, 2076
Psp6I CCWGG 4 cut(s) 1258, 1360, 1671, 1804
PspEI GGTNACC 1 cut(s) 807
PspGI CCWGG 4 cut(s) 1258, 1360, 1671, 1804
PspOMI GGGCCC 1 cut(s) 952
PspPPI RGGWCCY 2 cut(s) 780, 2076
PstNI CAGNNNCTG 3 cut(s) 724, 1991, 2797
RsaI GTAC 4 cut(s) 983, 1389, 1745, 2319
RsaNI GTAC 4 cut(s) 982, 1388, 1744, 2318
RseI CAYNNNNRTG 7 cut(s) 128, 800, 1227, 2051, 2313, 2325, 2712
SacI GAGCTC 3 cut(s) 993, 1971, 2549
SacII CCGCGG 1 cut(s) 837
SaqAI TTAA 4 cut(s) 1575, 2576, 2628, 2694
SatI GCNGC 3 cut(s) 1773, 1992, 2376
SchI GAGTC 7 cut(s) 269, 401, 715, 1566, 1818, 2264, 2744
ScrFI CCNGG 7 cut(s) 283, 650, 658, 1260, 1362, 1673, 1806
SduI GDGCHC 6 cut(s) 956, 993, 1248, 1971, 2432, 2549
SfaNI GCATC 9 cut(s) 476, 1002, 1116, 1138, 1188, 1601, 2003, 2142, 2284
SfcI CTRYAG 1 cut(s) 2754
Sfr303I CCGCGG 1 cut(s) 837
SfuI TTCGAA 2 cut(s) 397, 2394
SgrBI CCGCGG 1 cut(s) 837
SinI GGWCC 5 cut(s) 335, 619, 780, 1255, 2076
SmiMI CAYNNNNRTG 7 cut(s) 128, 800, 1227, 2051, 2313, 2325, 2712
SmlI CTYRAG 2 cut(s) 353, 1073
SmoI CTYRAG 2 cut(s) 353, 1073
SseBI AGGCCT 2 cut(s) 2016, 2360
SsiI CCGC 6 cut(s) 544, 834, 836, 1960, 2300, 2421
SspI AATATT 1 cut(s) 168
SspMI CTAG 9 cut(s) 111, 1104, 1445, 1716, 1910, 2012, 2519, 2537, 2812
SstI GAGCTC 3 cut(s) 993, 1971, 2549
StuI AGGCCT 2 cut(s) 2016, 2360
StyD4I CCNGG 7 cut(s) 281, 648, 656, 1258, 1360, 1671, 1804
StyI CCWWGG 3 cut(s) 1345, 2581, 2611
TaaI ACNGT 7 cut(s) 538, 813, 896, 1585, 2145, 2608, 2711
TaiI ACGT 5 cut(s) 564, 804, 1330, 1632, 2291
TaqI TCGA 8 cut(s) 258, 397, 410, 570, 762, 2394, 2466, 2556
TatI WGTACW 4 cut(s) 981, 1387, 1743, 2317
TfiI GAWTC 7 cut(s) 275, 1032, 1550, 1655, 1903, 1982, 2788
Tru1I TTAA 4 cut(s) 1575, 2576, 2628, 2694
Tru9I TTAA 4 cut(s) 1575, 2576, 2628, 2694
TscAI CASTG 6 cut(s) 1046, 1588, 1760, 2265, 2437, 2746
TseFI GTSAC 6 cut(s) 538, 807, 818, 896, 1784, 2172
TseI GCWGC 3 cut(s) 1772, 1991, 2375
Tsp45I GTSAC 6 cut(s) 538, 807, 818, 896, 1784, 2172
TspDTI ATGAA 7 cut(s) 17, 82, 387, 1487, 1855, 1896, 2195
TspGWI ACGGA 7 cut(s) 348, 419, 837, 1001, 1145, 2009, 2315
TspRI CASTG 6 cut(s) 1046, 1588, 1760, 2265, 2437, 2746
Van91I CCANNNNNTGG 1 cut(s) 1844
VpaK11BI GGWCC 5 cut(s) 335, 619, 780, 1255, 2076
VspI ATTAAT 1 cut(s) 1575
XagI CCTNNNNNAGG 1 cut(s) 1344
XapI RAATTY 5 cut(s) 118, 393, 1816, 2197, 2567
XceI RCATGY 1 cut(s) 2324
XcmI CCANNNNNNNNNTGG 2 cut(s) 1046, 1640
XmiI GTMKAC 4 cut(s) 330, 1952, 2268, 2645
XmnI GAANNNNTTC 2 cut(s) 51, 118
XspI CTAG 9 cut(s) 111, 1104, 1445, 1716, 1910, 2012, 2519, 2537, 2812
ZraI GACGTC 1 cut(s) 562
Zsp2I ATGCAT 1 cut(s) 2212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.