Rh5CG147300

Belongs to the glycosyl hydrolase 31 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
13290062 .. 13290418
357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG147300.1

Sequence Viewer

Length: 357 bp
ATGGAAGTCGAAATGGGAGGAGAGGGAGGGAAGTGGAGTTTCGTGAGGTTTCGTTCTGCACTAGCACAAAATGGAAGTCTAGTTTTGAGCTCAAAGGTCGAAAATGGAGAATTTGCATTAAGCCAAGGTTGGATCATTGATAAAATTACCGTCCTTGGGTTGGACAAAGTTAATGCAACAGATGGGTATACATTGAGAATTACTAAAGGAGCAAAGTTGAAAGAAAACACAAATGTTAAGGCCAACTTTCACAGTTATGAGCGTTTTGTCAAGGTAGAGTCCAGTGTATCCCTTCCTATAGGAAAGGAGTTTGAGTTGGAGATGAAGCCGAATCAGATACTGGAGAAAACACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

118

Amino Acids

13.12

Weight (kDa)

7.93

Isoelectric Point (pI)

8.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 188
AclWI GGATC 1 cut(s) 140
AcsI RAATTY 1 cut(s) 110
AfiI CCNNNNNNNGG 2 cut(s) 156, 160
AgsI TTSAA 1 cut(s) 220
AluBI AGCT 1 cut(s) 90
AluI AGCT 1 cut(s) 90
Alw21I GWGCWC 1 cut(s) 92
AlwI GGATC 1 cut(s) 140
AlwNI CAGNNNCTG 1 cut(s) 340
AoxI GGCC 1 cut(s) 240
ApoI RAATTY 1 cut(s) 110
ArsI GACNNNNNNTTYG 2 cut(s) 61, 93
BanII GRGCYC 1 cut(s) 92
Bbv12I GWGCWC 1 cut(s) 92
BccI CCATC 1 cut(s) 176
BciVI GTATCC 1 cut(s) 298
BfaI CTAG 3 cut(s) 62, 80, 355
BfmI CTRYAG 1 cut(s) 297
BfuI GTATCC 1 cut(s) 298
BsaJI CCNNGG 2 cut(s) 124, 154
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 2 cut(s) 156, 160
Bse1I ACTGG 2 cut(s) 282, 345
BseDI CCNNGG 2 cut(s) 124, 154
BseLI CCNNNNNNNGG 2 cut(s) 156, 160
BseNI ACTGG 2 cut(s) 282, 345
BseRI GAGGAG 1 cut(s) 33
BsgI GTGCAG 1 cut(s) 42
BshFI GGCC 1 cut(s) 242
BsiHKAI GWGCWC 1 cut(s) 92
BslI CCNNNNNNNGG 2 cut(s) 156, 160
BsnI GGCC 1 cut(s) 242
Bsp1286I GDGCHC 1 cut(s) 92
Bsp143I GATC 1 cut(s) 132
BspANI GGCC 1 cut(s) 242
BspPI GGATC 1 cut(s) 140
BsrI ACTGG 2 cut(s) 282, 345
BssECI CCNNGG 2 cut(s) 124, 154
BssMI GATC 1 cut(s) 132
BssNAI GTATAC 1 cut(s) 189
BssT1I CCWWGG 2 cut(s) 124, 154
Bst1107I GTATAC 1 cut(s) 189
Bst4CI ACNGT 2 cut(s) 151, 254
BstKTI GATC 1 cut(s) 135
BstMBI GATC 1 cut(s) 132
BstSFI CTRYAG 1 cut(s) 297
BstZ17I GTATAC 1 cut(s) 189
BsuI GTATCC 1 cut(s) 298
BsuRI GGCC 1 cut(s) 242
BtsIMutI CAGTG 1 cut(s) 289
CaiI CAGNNNCTG 1 cut(s) 340
CviJI RGCY 4 cut(s) 90, 123, 242, 328
CviKI_1 RGCY 4 cut(s) 90, 123, 242, 328
DpnI GATC 1 cut(s) 134
DpnII GATC 1 cut(s) 132
Ecl136II GAGCTC 1 cut(s) 90
Eco130I CCWWGG 2 cut(s) 124, 154
Eco24I GRGCYC 1 cut(s) 92
Eco53kI GAGCTC 1 cut(s) 90
EcoICRI GAGCTC 1 cut(s) 90
EcoT14I CCWWGG 2 cut(s) 124, 154
EcoT38I GRGCYC 1 cut(s) 92
ErhI CCWWGG 2 cut(s) 124, 154
FaiI YATR 3 cut(s) 189, 258, 299
FalI AAGNNNNNCTT 2 cut(s) 230, 262
FblI GTMKAC 1 cut(s) 188
FriOI GRGCYC 1 cut(s) 92
FspBI CTAG 3 cut(s) 62, 80, 355
HaeIII GGCC 1 cut(s) 242
HinfI GANTC 2 cut(s) 278, 331
Hpy166II GTNNAC 1 cut(s) 189
Hpy188I TCNGA 1 cut(s) 336
Hpy188III TCNNGA 1 cut(s) 43
Hpy8I GTNNAC 1 cut(s) 189
HpyAV CCTTC 1 cut(s) 302
HpyCH4III ACNGT 2 cut(s) 151, 254
HpyCH4V TGCA 3 cut(s) 59, 116, 176
Kzo9I GATC 1 cut(s) 132
LmnI GCTCC 1 cut(s) 209
LpnPI CCDG 2 cut(s) 295, 326
MaeI CTAG 3 cut(s) 62, 80, 355
MalI GATC 1 cut(s) 134
MboI GATC 1 cut(s) 132
MhlI GDGCHC 1 cut(s) 92
MluCI AATT 3 cut(s) 110, 144, 198
MlyI GAGTC 1 cut(s) 287
MmeI TCCRAC 3 cut(s) 110, 141, 297
MnlI CCTC 4 cut(s) 11, 16, 20, 39
MseI TTAA 3 cut(s) 119, 171, 237
MslI CAYNNNNRTG 1 cut(s) 255
NdeII GATC 1 cut(s) 132
PfeI GAWTC 1 cut(s) 331
PleI GAGTC 1 cut(s) 286
PpsI GAGTC 1 cut(s) 286
Psp124BI GAGCTC 1 cut(s) 92
PstNI CAGNNNCTG 1 cut(s) 340
RseI CAYNNNNRTG 1 cut(s) 255
SacI GAGCTC 1 cut(s) 92
SaqAI TTAA 3 cut(s) 119, 171, 237
Sau3AI GATC 1 cut(s) 132
SchI GAGTC 1 cut(s) 287
SduI GDGCHC 1 cut(s) 92
SetI ASST 5 cut(s) 50, 92, 99, 130, 276
SfcI CTRYAG 1 cut(s) 297
SgeI CNNG 8 cut(s) 55, 74, 92, 137, 167, 283, 294, 353
SmiMI CAYNNNNRTG 1 cut(s) 255
Sse9I AATT 3 cut(s) 110, 144, 198
SspMI CTAG 3 cut(s) 62, 80, 355
SstI GAGCTC 1 cut(s) 92
StyI CCWWGG 2 cut(s) 124, 154
TaaI ACNGT 2 cut(s) 151, 254
TaqI TCGA 2 cut(s) 9, 99
TasI AATT 3 cut(s) 110, 144, 198
TfiI GAWTC 1 cut(s) 331
Tru1I TTAA 3 cut(s) 119, 171, 237
Tru9I TTAA 3 cut(s) 119, 171, 237
TscAI CASTG 1 cut(s) 289
TspDTI ATGAA 1 cut(s) 338
TspRI CASTG 1 cut(s) 289
XapI RAATTY 1 cut(s) 110
XmiI GTMKAC 1 cut(s) 188
XspI CTAG 3 cut(s) 62, 80, 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.