Rroxscaffold_1G00059160

Belongs to the glycosyl hydrolase 31 family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
81127148 .. 81133899
6752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00059160.1

Sequence Viewer

Length: 2685 bp
ATGGAAAGAAACAGAACAAATTATACACCAAAAGCAATATTGTTTCGTCATCTTCTACCATTCTTCTTCTTCTTGTCTCTGCTTGATTGTATAGTTGCAGAAGAACCAGTTGGGTATGGATACAAAGTCGAGTCTGTCAATTCTGATTCCTCCGGGAAGACATTGACGGCTAATCTTGGCCTGATCAACAGCTCCTCAGTCTATGGACCTGACATCCCAAATCTCAAGCTTTATGCCAGCTATGAAACCAAAGAAAGACTAAGAATTCGAATAACGGACTCGAATAACCAAAGATGGGAAATCCCACAAGACCTTCTCCCACGCCAAACTCCACAAACATCCCACCATTCCATTCCCGAAAGCGACCTCATTTTCACACTCCACAACACCACCCCATTCGGCTTCACCGTCACCCGCCGTTCCTCCAACGACGTCGTATTCGACACCACCCCAAACCCCTCCAACCCTTCCTCCATCCTCGTCTTCAAGGACCAGTACATCCAGCTTTCCTCCTCTCTCCCGGAAACCCGGTCCTCTTTGTACGGCCTCGGTGAACACACCAAACCCTCCTTCAAGCTCCAACCCAATCAGACCCTCACACTCTGGACCACCGACATTCCCAGCGCCAACCTCGACCTCAACCTCTATGGGTCCCACCCGTTTTACATGGACGTGAGGTCACCGTCCCGTGACGGAAAAGTTACCGCGGGAACCACTCATGGAGTGTTGCTGTTGAATAGTAATGGCATGGATGTAAATTACGACGGTGACAGGATTACTTATAAGGTGATTGGTGGAGTTGTGGACTTGTATTTCTTCTCCGGTCCGACGCCCGAATTGGTGATGGAGCAGTACACGGAGCTCATTGGCCGACCTGCCCCGATGCCCTACTGGTCTTTTGGATTCCACCAGTGTAGATGGGGATACAAGGATGTTGCTGATGTTGAGGGGGTGGTTGCTGGTTATGCAAATGCTAGCATCCCTCTTGAAGTTATGTGGACAGACATTGACTACATGGATGCTTACAAGGATTTCACTCTTGATCCCATCAACTTTCCATTGGACAAGATGCAGAACTTTACAAACACCCTTCACCAAAATGGCCAGAAATATGTGCTCATCTTGGACCCTGGTATTAGTATAAATGAGAGCTATGGAACTTACATCAGAGGGAAGGAAGCAGATATTTACATAAAACGTGATGGCATTCCTTACCTGGCAAATTTATGGCCTGGTGATGTCTACTATCCTGATTTTGTACATCCACAAAGTGAACAATTTTGGGCTAATGAGATCAAACTATTTCAAGACCAACTAGCTTTTGATGGTCTTTGGCTTGATATGAATGAGGTATCCAATTTTATAACATCTCCTCCTACTCCGAACTCCACACTTGATGATCCACCTTACAAAATCAATGATTCTGGAGTCCAGCGTCCGATCATTAATAAGACTGTTCCGGCATCAGCTCTACACTTTGGTAATATAACAGATTATAATGTCCATAACCTATATGGGTTCTTGGAATCAAAAGCAACACACCAGGGGTTGATCAATGTTACTGGTAAGAGACCATTTATACTAGCTAGATCAACCTTTGTAAGCTCTGGTAAGTACACAGCACACTGGACTGGGGACAATGCAGCAAGATGGAGTGACTTGGCATACACAATTCCAAGCATTTTGAATTTTGGACTCTTCGGAGTTCCAATGGTTGGAGCTGATATATGTGGTTTCTCTGGGGATACTAACGAAGAACTCTGCCGGCGTTGGATTCAGCTAGGGGCCTTTTACCCGTTTTCAAGAGATCATTCAGCAAAGTTTACGATCCGCCAAGAGCTCTATGTTTGGGATTCAGTTGCTGCATCAGCAAGGAAGGTGCTAGGCCTCCGTTACCGGTTGCTCCCTTTGTTCTACACATCAATGTATCAGGCACACAAAAAAGGGACCCCCATTGCAAGGCCCCTTTTCTTCTCGTTTACTGAAGATACCAATACATACGGCATCAATTCACAGTTCTTGATTGGTAAATGTGTGATGGTGTCACCTGTGTTGCAGGAAGGAGCAAATTCAGTTAATGCATATTTTACTGCAGGAAACTGGTTTGATCTCTTCAACTACTCCAGATCAGTGAGTGTAGACTCCGGCGAGTATGTTACGTTGGATGCACCGCCTGATCATATCAATGTACATGTCCATGAAGGAAACATATTGGCCTTGCAAGGAGAGGCCTTGACAACACAAGCCGCTCGGAAGACTGCATTCGAACTCTTGGTGGTCATTAGTGTTAGCGGAGAGAGTACTGGAGAAGTGTTCTTGGATGATGGAGAGGAAGTCGAAATGGGAGGAGAGGGAGGGAAGTGGAGTTTCGTGAGGTTTCGTTCTGCCCTAGCACAAAATGGAAGTCTAGTTTTGAGCTCAAAGGTCGAAAATGGAAAATTTGCATTAAGCCAAGGTTGGATCATTGATAAAATTACTGTCCTTGGGTGGGACAAAGTTAATGGAACAGATGGGTATACATTGAGCATTACTAAAGGAGCAAAGTTGCAAGGAAACACAGATGTTAAGGCCAACTTTCACAGTTATGAGCGTTTTGTCAAGATAGAGTCCAGTGTATCCCTTCCTCTAGGAAAGGAGTTCGAGTTGCAGCTGAAGCCGAATCAGATACAGGCGAAAACACACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.

Protein Analysis

894

Amino Acids

100.19

Weight (kDa)

5.55

Isoelectric Point (pI)

35.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Gal_mutarotas_2 PF13802 87 - 248 4.4e-11 Glycosyl hydrolase 31 N-terminal galactose mutarotase-like domain
Glyco_hydro_31_2nd PF01055 292 - 640 6e-120 Glycosyl hydrolases family 31 TIM-barrel domain
Glyco_hydro_31_3rd PF21365 649 - 738 8.6e-22 Glycosyl hydrolase family 31 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 783, 1364, 1497
AatII GACGTC 1 cut(s) 435
Acc36I ACCTGC 1 cut(s) 883
AccB7I CCANNNNNTGG 1 cut(s) 1715
AccBSI CCGCTC 1 cut(s) 2249
AccI GTMKAC 3 cut(s) 1242, 2139, 2516
AccII CGCG 1 cut(s) 707
AciI CCGC 7 cut(s) 415, 705, 707, 1831, 2171, 2247, 2292
AclWI GGATC 4 cut(s) 1037, 1394, 1822, 2468
AcoI YGGCCR 2 cut(s) 868, 1102
AcsI RAATTY 5 cut(s) 264, 1222, 1687, 2068, 2438
AcuI CTGAAG 2 cut(s) 2004, 2672
AcyI GRCGYC 2 cut(s) 432, 830
AdeI CACNNNGTG 1 cut(s) 1271
AfaI GTAC 7 cut(s) 497, 542, 854, 1260, 1616, 2190, 2302
AfiI CCNNNNNNNGG 4 cut(s) 295, 1715, 1959, 2488
AflIII ACRYGT 1 cut(s) 2191
AgeI ACCGGT 1 cut(s) 1896
AgsI TTSAA 8 cut(s) 487, 574, 736, 989, 1307, 1687, 1803, 2116
AhdI GACNNNNNGTC 1 cut(s) 676
AjiI CACGTC 1 cut(s) 673
AjnI CCWGG 4 cut(s) 1129, 1215, 1231, 1542
AjuI GAANNNNNNNTTGG 4 cut(s) 93, 125, 554, 586
Alw21I GWGCWC 4 cut(s) 864, 1119, 1842, 2420
Alw26I GTCTC 2 cut(s) 81, 1564
AlwI GGATC 4 cut(s) 1037, 1394, 1822, 2468
AlwNI CAGNNNCTG 1 cut(s) 1862
ApeKI GCWGC 3 cut(s) 1643, 1862, 2647
ApoI RAATTY 5 cut(s) 264, 1222, 1687, 2068, 2438
ArsI GACNNNNNNTTYG 6 cut(s) 249, 281, 422, 454, 2389, 2421
AseI ATTAAT 1 cut(s) 1446
AsiGI ACCGGT 1 cut(s) 1896
AspLEI GCGC 1 cut(s) 626
AsuC2I CCSGG 3 cut(s) 154, 521, 529
AsuII TTCGAA 2 cut(s) 268, 2265
AsuNHI GCTAGC 1 cut(s) 974
AvaII GGWCC 8 cut(s) 206, 490, 531, 606, 651, 824, 1126, 1947
BalI TGGCCA 1 cut(s) 1104
BanII GRGCYC 3 cut(s) 864, 1842, 2420
BbsI GAAGAC 3 cut(s) 164, 475, 2261
Bbv12I GWGCWC 4 cut(s) 864, 1119, 1842, 2420
BbvI GCAGC 3 cut(s) 1655, 1849, 2659
BceAI ACGGC 4 cut(s) 183, 402, 559, 2017
BciT130I CCWGG 4 cut(s) 1131, 1217, 1233, 1544
BciVI GTATCC 5 cut(s) 113, 917, 1363, 1738, 2626
BclI TGATCA 3 cut(s) 183, 1551, 2176
BcnI CCSGG 3 cut(s) 154, 521, 529
BcoDI GTCTC 2 cut(s) 81, 1564
BfmI CTRYAG 1 cut(s) 2091
BfoI RGCGCY 1 cut(s) 627
BfuAI ACCTGC 1 cut(s) 883
BfuI GTATCC 5 cut(s) 113, 917, 1363, 1738, 2626
BisI GCNGC 4 cut(s) 1644, 1863, 2247, 2648
BlsI GCNGC 4 cut(s) 1645, 1864, 2248, 2649
BmcAI AGTACT 1 cut(s) 2302
Bme1390I CCNGG 7 cut(s) 154, 521, 529, 1131, 1217, 1233, 1544
Bme18I GGWCC 8 cut(s) 206, 490, 531, 606, 651, 824, 1126, 1947
BmeRI GACNNNNNGTC 1 cut(s) 676
BmgBI CACGTC 1 cut(s) 673
BmiI GGNNCC 8 cut(s) 652, 653, 712, 1128, 1786, 1948, 1949, 1964
BmrFI CCNGG 7 cut(s) 154, 521, 529, 1131, 1217, 1233, 1544
BmrI ACTGGG 1 cut(s) 1641
BmsI GCATC 8 cut(s) 873, 987, 1009, 1059, 1472, 1874, 2013, 2155
BmtI GCTAGC 1 cut(s) 978
BmuI ACTGGG 1 cut(s) 1641
BpiI GAAGAC 3 cut(s) 164, 475, 2261
BpmI CTGGAG 3 cut(s) 1446, 2107, 2325
Bpu14I TTCGAA 2 cut(s) 268, 2265
BpuEI CTTGAG 1 cut(s) 209
BpuMI CCSGG 3 cut(s) 154, 521, 529
BsaHI GRCGYC 2 cut(s) 432, 830
BsaI GGTCTC 1 cut(s) 1564
BsaJI CCNNGG 6 cut(s) 547, 705, 1129, 1543, 2452, 2482
BsaWI WCCGGW 2 cut(s) 821, 1896
BsaXI ACNNNNNCTCC 8 cut(s) 455, 485, 1357, 1387, 2319, 2349, 2627, 2657
Bsc4I CCNNNNNNNGG 4 cut(s) 295, 1715, 1959, 2488
Bse118I RCCGGY 2 cut(s) 1764, 1896
Bse3DI GCAATG 1 cut(s) 1953
BseBI CCWGG 4 cut(s) 1131, 1217, 1233, 1544
BseDI CCNNGG 6 cut(s) 547, 705, 1129, 1543, 2452, 2482
BseLI CCNNNNNNNGG 4 cut(s) 295, 1715, 1959, 2488
BseMI GCAATG 1 cut(s) 1953
BseMII CTCAG 1 cut(s) 210
BseRI GAGGAG 4 cut(s) 184, 502, 1362, 2361
BseXI GCAGC 3 cut(s) 1655, 1849, 2659
BseYI CCCAGC 1 cut(s) 620
Bsh1236I CGCG 1 cut(s) 707
BshTI ACCGGT 1 cut(s) 1896
BsiHKAI GWGCWC 4 cut(s) 864, 1119, 1842, 2420
BsiSI CCGG 8 cut(s) 153, 521, 529, 822, 1460, 1765, 1897, 2145
BslFI GGGAC 5 cut(s) 637, 670, 1649, 1960, 2504
BslI CCNNNNNNNGG 4 cut(s) 295, 1715, 1959, 2488
BsmAI GTCTC 2 cut(s) 81, 1564
BsmFI GGGAC 5 cut(s) 637, 670, 1649, 1960, 2504
BsmI GAATGC 2 cut(s) 1206, 2261
Bso31I GGTCTC 1 cut(s) 1564
Bsp119I TTCGAA 2 cut(s) 268, 2265
Bsp1286I GDGCHC 4 cut(s) 864, 1119, 1842, 2420
Bsp1407I TGTACA 2 cut(s) 1258, 2188
BspACI CCGC 7 cut(s) 415, 705, 707, 1831, 2171, 2247, 2292
BspCNI CTCAG 1 cut(s) 209
BspFNI CGCG 1 cut(s) 707
BspLI GGNNCC 8 cut(s) 652, 653, 712, 1128, 1786, 1948, 1949, 1964
BspMAI CTGCAG 1 cut(s) 2095
BspMI ACCTGC 1 cut(s) 883
BspOI GCTAGC 1 cut(s) 978
BspPI GGATC 4 cut(s) 1037, 1394, 1822, 2468
BspT104I TTCGAA 2 cut(s) 268, 2265
BspTNI GGTCTC 1 cut(s) 1564
BsrBI CCGCTC 1 cut(s) 2249
BsrDI GCAATG 1 cut(s) 1953
BsrFI RCCGGY 2 cut(s) 1764, 1896
BsrGI TGTACA 2 cut(s) 1258, 2188
BssAI RCCGGY 2 cut(s) 1764, 1896
BssECI CCNNGG 6 cut(s) 547, 705, 1129, 1543, 2452, 2482
BssNAI GTATAC 1 cut(s) 2517
BssNI GRCGYC 2 cut(s) 432, 830
BssT1I CCWWGG 2 cut(s) 2452, 2482
Bst1107I GTATAC 1 cut(s) 2517
Bst2UI CCWGG 4 cut(s) 1131, 1217, 1233, 1544
Bst4CI ACNGT 7 cut(s) 409, 684, 767, 1456, 2016, 2479, 2582
Bst6I CTCTTC 2 cut(s) 1703, 2117
BstACI GRCGYC 2 cut(s) 432, 830
BstAUI TGTACA 2 cut(s) 1258, 2188
BstBI TTCGAA 2 cut(s) 268, 2265
BstC8I GCNNGC 3 cut(s) 238, 976, 1766
BstDEI CTNAG 2 cut(s) 196, 260
BstDSI CCRYGG 1 cut(s) 705
BstEII GGTNACC 1 cut(s) 678
BstFNI CGCG 1 cut(s) 707
BstH2I RGCGCY 1 cut(s) 627
BstHHI GCGC 1 cut(s) 626
BstMAI GTCTC 2 cut(s) 81, 1564
BstMWI GCNNNNNNNGC 3 cut(s) 965, 1868, 2653
BstNI CCWGG 4 cut(s) 1131, 1217, 1233, 1544
BstNSI RCATGY 1 cut(s) 2195
BstPI GGTNACC 1 cut(s) 678
BstSCI CCNGG 7 cut(s) 152, 519, 527, 1129, 1215, 1231, 1542
BstSFI CTRYAG 1 cut(s) 2091
BstUI CGCG 1 cut(s) 707
BstV1I GCAGC 3 cut(s) 1655, 1849, 2659
BstV2I GAAGAC 3 cut(s) 164, 475, 2261
BstZ17I GTATAC 1 cut(s) 2517
BsuI GTATCC 5 cut(s) 113, 917, 1363, 1738, 2626
BtgI CCRYGG 1 cut(s) 705
BtrI CACGTC 1 cut(s) 673
BtsIMutI CAGTG 4 cut(s) 917, 1624, 2136, 2617
BveI ACCTGC 1 cut(s) 883
Cac8I GCNNGC 3 cut(s) 238, 976, 1766
CaiI CAGNNNCTG 1 cut(s) 1862
CfoI GCGC 1 cut(s) 626
Cfr10I RCCGGY 2 cut(s) 1764, 1896
Cfr42I CCGCGG 1 cut(s) 708
CpoI CGGWCCG 1 cut(s) 824
CseI GACGC 2 cut(s) 838, 1424
Csp6I GTAC 7 cut(s) 496, 541, 853, 1259, 1615, 2189, 2301
CspAI ACCGGT 1 cut(s) 1896
CspI CGGWCCG 1 cut(s) 824
CviAII CATG 6 cut(s) 667, 719, 748, 1015, 2192, 2198
CviQI GTAC 7 cut(s) 496, 541, 853, 1259, 1615, 2189, 2301
DdeI CTNAG 2 cut(s) 196, 260
DraIII CACNNNGTG 1 cut(s) 1271
DriI GACNNNNNGTC 1 cut(s) 676
EaeI YGGCCR 2 cut(s) 868, 1102
Eam1104I CTCTTC 2 cut(s) 1703, 2117
Eam1105I GACNNNNNGTC 1 cut(s) 676
EarI CTCTTC 2 cut(s) 1703, 2117
EciI GGCGGA 1 cut(s) 1820
Ecl136II GAGCTC 3 cut(s) 862, 1840, 2418
Eco130I CCWWGG 2 cut(s) 2452, 2482
Eco147I AGGCCT 2 cut(s) 1887, 2231
Eco24I GRGCYC 3 cut(s) 864, 1842, 2420
Eco31I GGTCTC 1 cut(s) 1564
Eco47I GGWCC 8 cut(s) 206, 490, 531, 606, 651, 824, 1126, 1947
Eco53kI GAGCTC 3 cut(s) 862, 1840, 2418
Eco57I CTGAAG 2 cut(s) 2004, 2672
Eco91I GGTNACC 1 cut(s) 678
EcoICRI GAGCTC 3 cut(s) 862, 1840, 2418
EcoO109I RGGNCCY 4 cut(s) 651, 1785, 1947, 1962
EcoO65I GGTNACC 1 cut(s) 678
EcoRI GAATTC 1 cut(s) 264
EcoRII CCWGG 4 cut(s) 1129, 1215, 1231, 1542
EcoT14I CCWWGG 2 cut(s) 2452, 2482
EcoT22I ATGCAT 1 cut(s) 2083
EcoT38I GRGCYC 3 cut(s) 864, 1842, 2420
ErhI CCWWGG 2 cut(s) 2452, 2482
FaeI CATG 6 cut(s) 670, 722, 751, 1018, 2195, 2201
FalI AAGNNNNNCTT 2 cut(s) 2558, 2590
FaqI GGGAC 5 cut(s) 637, 670, 1649, 1960, 2504
FatI CATG 6 cut(s) 666, 718, 747, 1014, 2191, 2197
FauI CCCGC 2 cut(s) 422, 700
FbaI TGATCA 3 cut(s) 183, 1551, 2176
FblI GTMKAC 3 cut(s) 1242, 2139, 2516
Fnu4HI GCNGC 4 cut(s) 1644, 1863, 2247, 2648
FriOI GRGCYC 3 cut(s) 864, 1842, 2420
Fsp4HI GCNGC 4 cut(s) 1644, 1863, 2247, 2648
GlaI GCGC 1 cut(s) 625
GluI GCNGC 4 cut(s) 1644, 1863, 2247, 2648
GsaI CCCAGC 1 cut(s) 624
GsuI CTGGAG 3 cut(s) 1446, 2107, 2325
HaeII RGCGCY 1 cut(s) 627
HapII CCGG 8 cut(s) 153, 521, 529, 822, 1460, 1765, 1897, 2145
HgaI GACGC 2 cut(s) 838, 1424
HhaI GCGC 1 cut(s) 626
Hin1I GRCGYC 2 cut(s) 432, 830
Hin1II CATG 6 cut(s) 670, 722, 751, 1018, 2195, 2201
Hin6I GCGC 1 cut(s) 624
HinP1I GCGC 1 cut(s) 624
HindIII AAGCTT 1 cut(s) 227
HpaII CCGG 8 cut(s) 153, 521, 529, 822, 1460, 1765, 1897, 2145
Hpy188I TCNGA 9 cut(s) 145, 591, 828, 1169, 1383, 1440, 1703, 2253, 2664
Hpy99I CGWCG 4 cut(s) 434, 437, 767, 832
HpyAV CCTTC 9 cut(s) 323, 477, 580, 1100, 1168, 1870, 2054, 2195, 2630
HpyCH4III ACNGT 7 cut(s) 409, 684, 767, 1456, 2016, 2479, 2582
HpyCH4IV ACGT 4 cut(s) 432, 672, 1198, 2159
HpyF10VI GCNNNNNNNGC 3 cut(s) 965, 1868, 2653
HpyF3I CTNAG 2 cut(s) 196, 260
HpySE526I ACGT 4 cut(s) 432, 672, 1198, 2159
Hsp92I GRCGYC 2 cut(s) 432, 830
Hsp92II CATG 6 cut(s) 670, 722, 751, 1018, 2195, 2201
HspAI GCGC 1 cut(s) 624
KflI GGGWCCC 2 cut(s) 651, 1947
KroI GCCGGC 1 cut(s) 1764
KroNI GCCGGC 1 cut(s) 1766
Ksp22I TGATCA 3 cut(s) 183, 1551, 2176
KspI CCGCGG 1 cut(s) 708
LmnI GCTCC 8 cut(s) 197, 582, 847, 859, 1718, 1908, 2063, 2537
Lsp1109I GCAGC 3 cut(s) 1655, 1849, 2659
LweI GCATC 8 cut(s) 873, 987, 1009, 1059, 1472, 1874, 2013, 2155
MaeII ACGT 4 cut(s) 432, 672, 1198, 2159
MbiI CCGCTC 1 cut(s) 2249
MhlI GDGCHC 4 cut(s) 864, 1119, 1842, 2420
MlsI TGGCCA 1 cut(s) 1104
MluNI TGGCCA 1 cut(s) 1104
MlyI GAGTC 6 cut(s) 140, 272, 1437, 1689, 2135, 2615
MmeI TCCRAC 8 cut(s) 450, 486, 604, 851, 1696, 1751, 2142, 2438
Mox20I TGGCCA 1 cut(s) 1104
Mph1103I ATGCAT 1 cut(s) 2083
MroNI GCCGGC 1 cut(s) 1764
MscI TGGCCA 1 cut(s) 1104
MseI TTAA 5 cut(s) 1446, 2076, 2447, 2499, 2565
MslI CAYNNNNRTG 6 cut(s) 671, 1098, 1922, 2184, 2196, 2583
Msp20I TGGCCA 1 cut(s) 1104
MspA1I CMGCKG 2 cut(s) 707, 2650
MspI CCGG 8 cut(s) 153, 521, 529, 822, 1460, 1765, 1897, 2145
MspR9I CCNGG 7 cut(s) 154, 521, 529, 1131, 1217, 1233, 1544
Mva1269I GAATGC 2 cut(s) 1206, 2261
MvaI CCWGG 4 cut(s) 1131, 1217, 1233, 1544
MvnI CGCG 1 cut(s) 707
MwoI GCNNNNNNNGC 3 cut(s) 965, 1868, 2653
NaeI GCCGGC 1 cut(s) 1766
NciI CCSGG 3 cut(s) 154, 521, 529
NgoMIV GCCGGC 1 cut(s) 1764
NheI GCTAGC 1 cut(s) 974
NlaIII CATG 6 cut(s) 670, 722, 751, 1018, 2195, 2201
NlaIV GGNNCC 8 cut(s) 652, 653, 712, 1128, 1786, 1948, 1949, 1964
NmuCI GTSAC 6 cut(s) 409, 678, 689, 767, 1655, 2043
NsiI ATGCAT 1 cut(s) 2083
NspI RCATGY 1 cut(s) 2195
NspV TTCGAA 2 cut(s) 268, 2265
PceI AGGCCT 2 cut(s) 1887, 2231
PciI ACATGT 1 cut(s) 2191
PcsI WCGNNNNNNNCGW 2 cut(s) 405, 438
PctI GAATGC 2 cut(s) 1206, 2261
PdiI GCCGGC 1 cut(s) 1766
PfeI GAWTC 7 cut(s) 146, 903, 1421, 1526, 1774, 1853, 2659
PflMI CCANNNNNTGG 1 cut(s) 1715
PfoI TCCNGGA 2 cut(s) 152, 519
PinAI ACCGGT 1 cut(s) 1896
PkrI GCNGC 4 cut(s) 1645, 1864, 2248, 2649
PleI GAGTC 6 cut(s) 139, 272, 1436, 1689, 2135, 2614
PpsI GAGTC 6 cut(s) 139, 272, 1436, 1689, 2135, 2614
PpuMI RGGWCCY 2 cut(s) 651, 1947
PscI ACATGT 1 cut(s) 2191
PshBI ATTAAT 1 cut(s) 1446
PsiI TTATAA 3 cut(s) 783, 1364, 1497
Psp124BI GAGCTC 3 cut(s) 864, 1842, 2420
Psp5II RGGWCCY 2 cut(s) 651, 1947
Psp6I CCWGG 4 cut(s) 1129, 1215, 1231, 1542
PspEI GGTNACC 1 cut(s) 678
PspFI CCCAGC 1 cut(s) 620
PspGI CCWGG 4 cut(s) 1129, 1215, 1231, 1542
PspN4I GGNNCC 8 cut(s) 652, 653, 712, 1128, 1786, 1948, 1949, 1964
PspPPI RGGWCCY 2 cut(s) 651, 1947
PsrI GAACNNNNNNTAC 2 cut(s) 7, 39
PstI CTGCAG 1 cut(s) 2095
PstNI CAGNNNCTG 1 cut(s) 1862
PvuII CAGCTG 1 cut(s) 2650
RsaI GTAC 7 cut(s) 497, 542, 854, 1260, 1616, 2190, 2302
RsaNI GTAC 7 cut(s) 496, 541, 853, 1259, 1615, 2189, 2301
RseI CAYNNNNRTG 6 cut(s) 671, 1098, 1922, 2184, 2196, 2583
Rsr2I CGGWCCG 1 cut(s) 824
RsrII CGGWCCG 1 cut(s) 824
SacI GAGCTC 3 cut(s) 864, 1842, 2420
SacII CCGCGG 1 cut(s) 708
SaqAI TTAA 5 cut(s) 1446, 2076, 2447, 2499, 2565
SatI GCNGC 4 cut(s) 1644, 1863, 2247, 2648
ScaI AGTACT 1 cut(s) 2302
SchI GAGTC 6 cut(s) 140, 272, 1437, 1689, 2135, 2615
ScrFI CCNGG 7 cut(s) 154, 521, 529, 1131, 1217, 1233, 1544
SduI GDGCHC 4 cut(s) 864, 1119, 1842, 2420
SfaNI GCATC 8 cut(s) 873, 987, 1009, 1059, 1472, 1874, 2013, 2155
SfcI CTRYAG 1 cut(s) 2091
Sfr303I CCGCGG 1 cut(s) 708
SfuI TTCGAA 2 cut(s) 268, 2265
SgrBI CCGCGG 1 cut(s) 708
SinI GGWCC 8 cut(s) 206, 490, 531, 606, 651, 824, 1126, 1947
SmiMI CAYNNNNRTG 6 cut(s) 671, 1098, 1922, 2184, 2196, 2583
SmlI CTYRAG 1 cut(s) 224
SmoI CTYRAG 1 cut(s) 224
SseBI AGGCCT 2 cut(s) 1887, 2231
SsiI CCGC 7 cut(s) 415, 705, 707, 1831, 2171, 2247, 2292
SspI AATATT 1 cut(s) 39
SstI GAGCTC 3 cut(s) 864, 1842, 2420
StuI AGGCCT 2 cut(s) 1887, 2231
StyD4I CCNGG 7 cut(s) 152, 519, 527, 1129, 1215, 1231, 1542
StyI CCWWGG 2 cut(s) 2452, 2482
TaaI ACNGT 7 cut(s) 409, 684, 767, 1456, 2016, 2479, 2582
TaiI ACGT 4 cut(s) 435, 675, 1201, 2162
TaqI TCGA 9 cut(s) 129, 268, 281, 441, 633, 2265, 2337, 2427, 2640
TatI WGTACW 6 cut(s) 495, 852, 1258, 1614, 2188, 2300
TauI GCSGC 1 cut(s) 2249
TfiI GAWTC 7 cut(s) 146, 903, 1421, 1526, 1774, 1853, 2659
Tru1I TTAA 5 cut(s) 1446, 2076, 2447, 2499, 2565
Tru9I TTAA 5 cut(s) 1446, 2076, 2447, 2499, 2565
TscAI CASTG 4 cut(s) 917, 1631, 2136, 2617
TseFI GTSAC 6 cut(s) 409, 678, 689, 767, 1655, 2043
TseI GCWGC 3 cut(s) 1643, 1862, 2647
Tsp45I GTSAC 6 cut(s) 409, 678, 689, 767, 1655, 2043
TspDTI ATGAA 3 cut(s) 258, 1358, 2214
TspGWI ACGGA 4 cut(s) 290, 708, 872, 1880
TspRI CASTG 4 cut(s) 917, 1631, 2136, 2617
Van91I CCANNNNNTGG 1 cut(s) 1715
VpaK11BI GGWCC 8 cut(s) 206, 490, 531, 606, 651, 824, 1126, 1947
VspI ATTAAT 1 cut(s) 1446
XapI RAATTY 5 cut(s) 264, 1222, 1687, 2068, 2438
XceI RCATGY 1 cut(s) 2195
XcmI CCANNNNNNNNNTGG 1 cut(s) 1511
XmiI GTMKAC 3 cut(s) 1242, 2139, 2516
ZraI GACGTC 1 cut(s) 433
ZrmI AGTACT 1 cut(s) 2302
Zsp2I ATGCAT 1 cut(s) 2083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.