Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001538

Physical Location & Seq

Genomic Coordinates Reverse (-)

23365139 .. 23368136

Gene Structure 2998 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g30141.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2814 bp

ATGAAAGTTAAGATGGATACTGGAGATAGTAAAAAACTCAGTGAGCTTGAGAGTGTTACGGTTAGGCAAGATATTCAAGGACCAAATTTGGGTGAAAATGGGAGAGAATGCGATGCACTCCACCTGCTTGATGAAATGTCCAAGTCAAATGAGTTGTGTAATGCAGGAAGGACCAATTCTACTCTTACGAGTATCCGGGACAAAGGTGGGGGACATGTTCACCAACCATTAGAATATGCAATTTGGGTGAATTATAAAGAAGAGGATGAGTATTTTGACAAATCTGTTGGGAGAGATGATGAAGTTGATGATGGCCATGAGATATCAAAGTTGGAGCTTAGCACTCAACTTGTTAGAAATGATAAGTTTACTATTGTTCCCAGGGAAAAAGTTCACAATGATGGTATGGTAATTAGTGGACTAAATCATGTGATTGAGATTATGATCACTGGAGAGGCAAGGGTCATTTGTAGAAGGTTCGATGAGAATGTGTTGGGTGACGCCATTGAGAAGGTTTTGGTTCCTGCCAGTGTGGTCAATTTATCCGGCTGTTTAGAGACTAAAGATAACTGCAATTCTGCCATGCTTGAAAGTAATGATAATTCAGTAGAGCAGGAGGTGGAAATTGTGATAATGGGAGAAGAACATCTTGTACTAGATAAAGAGTCTACATGTATGTGGCTTTGGGTAAGTCTTTCCAACTGGATAGCCGCATTAAGACCTTTGAGGAAGCCAACGAATGCCTACACTAAGGTATACTCCAGTAGTACCAACTTTGGTTTCGGAATAGTCGATGTTGTTGAGACCATTGTGAAATCACAAAGTTGCTGGGAGGAGTTCTGTTTGATGATTGATGGCATTTTTAAAAGGGCTGCCCAAGTAGTTCATGAGTTGAGTTCTTCCTCAGAGAAGGTTAGAATCCTGCATTTTTATAGCAACACAACAGGAAATGAGAGGACATTTGCTAAAACTACGGTTTTGGAACATCCATCTAGTTTTGAAGTTATTCTGCTTGTTTCAAGTAAATCTGGTAACAGCTCGAAATTTATCTTTTCTCTAATAATTTCCTTGATTGAATTGTGGAAGTATGGATATGTTGAGAAGAATATGAGATGGGTTACTAAGATCTTAGTGGCTAGTTTTGGAAAGGAGTGCTTGAAATATTACCATGATCAGGGGCTTATATTTAGTGCCATTAAATTGGAGACACTAAGTTTGTTTAGTACTGACAAGTTTGACAAAATAGAAGGGGATGTCACAGTGATGTTTGATGACATTTGGGGACGGTGGAAATCTACAATAATTGCTGCAAATGATTACTGTACTGCAGAATTGTGTGAGATATTTCCTGAAAACCATATGAAGTTAGATAGCAAGTGCTTGGGATATGTTTTATGTGCCTTGGAGCTTGTAAAAAAGTTAGCTACTGGACCTAATCTGGGTGACTCAGTTTGCATAAACAAATTTGTGTTGTTTGAGGTTATTGCTACATCTTCAAATGTTAAGCATACTTCTGGTGATGGGGAAGCTAAATTTCCAAGTGCAACTCTTCATATTATTCTAGAGTTGGTATTATGGGACAGAGTTCCAGAATGGATAGTTGACAAGAAAGTTATTAAGAAGGTGCTACAACTGGAGGGGAAGGGGCGTCCAAATGAAAGGGATGTTGTTACAATGGAATGGATTGGGAAATTGAAAGATGGTAAGGAACTTTTGAAGGATCATGGGGAAAGAGAAGGACCATGTGAGTTCAACATAGATGCAGAGCAAGTCACTATGGAGGTTGACAAAGTTGTAGTGACAATGAGAAAGGGTGAGATAGCTCTTGTGATTATGTTCTTTGAGTATGCAGTGGGTGCATTAGAGGCCTGGTGGGCGTTGATAATGGTACCTCCTCATTCAACTCTCTTTTATGTGGCTGAGCTGGTATTTGTAATTGTTGTCAAGGACAAGAAATTTGAGGTTGCTAGTAAGGAGAAGGAAGGAGGGTCTTCAGACACTATTCATATAATGGCTGGTATTGATGATGGTAAGACTTTTGATCTCTATCAATCTGCCTACATCGGGGTTCAAGTGCATGTCAAGGACCAAATTATTGAGATGTCAAACACATGTGGTGGAAATATAAATGTCCAAGAATTTGACTGTGTTGCATCAAATCTTGGAATCACAACTTTCTTTGCTAGTGCTTTACAACGATATGGCATGAAATTAGGGTGGAAAGTGTCTGCCTATTTCCCACCTAACATGTATGATGCAGGTACAAGCTTAATTACAGTTCCTCATACTGTTGGTAGTGTATTATGTTGCAAATGTGGTAATTTCGTGGCACCAAATTCTGGCAATGGGTACTTTAAGTGTTTGCAATATGCAGTTGGCATTATTGAAGATTTTCATAAGCAAGTTGCCATAAAGCATTGCTTTGAATGTAATGCCTACTTGCAGCCTCAGAGAACTTGGATTAAGACCCCGATAGAATTGAATGAGCTGCTAACTTTCTGTGTAGACAGACTAAAGAACTTGAATAAATTTAGAAATGGTGATATGTTCAGACATGCTGCTATGGACATAATTGCTATATTCAGTGAAAAGGTATGGATGATCACTTTTGGGGATGATAAGCTAGCTCGCAAGTGGTTGTTTAAACTCAAGGCTTCCAGAATGTCATTTCTCATATGCAGGTTGACTGATTGGCAAGGGTGTCAAGGATATTGTGTTGATCTTAGAATTGCAGCTTTGAAGTTTTCCCTTCTGGTTCATGTTGTTTGGTCTAGATTTGAGTGGCTCTACTTGCAGTGTCTCTCTTATAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0006457 GO:0006464 GO:0006807 GO:0006950 GO:0008144 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009987 GO:0010286 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0033554 GO:0034605 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050896 GO:0051716 GO:0061077 GO:0070370 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04915 map04915

Pfam Domains

Protein Families

FKBP_C TPR_1 TPR_2 TPR_8

Protein Analysis

938

Amino Acids

105.94

Weight (kDa)

5.61

Isoelectric Point (pI)

32.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FKBP_C	PF00254	549 - 642	2.6e-10	FKBP-type peptidyl-prolyl cis-trans isomerase
NMD3	PF04981	769 - 845	1.1e-08	NMD3 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001538)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g15102 FvH4_1g18481 FvH4_1g23805 FvH4_1g23806 FvH4_1g24581 FvH4_2g20031 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g23161 FvH4_3g29863 FvH4_3g30141 FvH4_3g31747 FvH4_4g00983 FvH4_4g08481 FvH4_4g08541 FvH4_4g14020 FvH4_4g35090 FvH4_4g35091 FvH4_6g33521 FvH4_6g37662 FvH4_6g39361 FvH4_6g39362 FvH4_7g11680 FvH4_7g14385 FvH4_7g27352 FvH4_7g27353 FvH4_7g28392
pyrus_communis	pycom07g27700
rosa_chinensis	RchiOBHm_Chr3g0481561 RchiOBHm_Chr5g0002281
rosa_laevigata	RLG00000010224 RLG00000028985
rosa_multiflora	Rmu_co8150836.1_g000001 Rmu_sc0001141.1_g000014 Rmu_sc0003002.1_g000038 Rmu_sc0010050.1_g000004 Rmu_sc0033439.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130360 Rroxscaffold_3G00239170 Rroxscaffold_3G00245770 Rroxscaffold_4G00314270 Rroxscaffold_5G00333350 Rroxscaffold_5G00382830
rosa_samantha	Rh1BG051600 Rh7BG317500 Rh7BG317600 Rh7CG294600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	255, 2808
AarI	CACCTGC	1 cut(s)	132
Acc36I	ACCTGC	3 cut(s)	132, 2249, 2670
Acc65I	GGTACC	1 cut(s)	1888
AccB1I	GGYRCC	2 cut(s)	1888, 2329
AccB7I	CCANNNNNTGG	1 cut(s)	2339
AccI	GTMKAC	3 cut(s)	668, 756, 2505
AciI	CCGC	1 cut(s)	711
AclWI	GGATC	1 cut(s)	1728
AcoI	YGGCCR	1 cut(s)	313
AcsI	RAATTY	8 cut(s)	85, 1043, 1463, 1532, 1955, 2138, 2335, 2528
AcuI	CTGAAG	1 cut(s)	1977
AcyI	GRCGYC	2 cut(s)	501, 1648
AfaI	GTAC	7 cut(s)	654, 769, 1225, 1324, 1890, 2263, 2351
AfiI	CCNNNNNNNGG	5 cut(s)	89, 1174, 1439, 2064, 2339
AflIII	ACRYGT	4 cut(s)	214, 671, 2111, 2247
AjnI	CCWGG	2 cut(s)	380, 1868
AjuI	GAANNNNNNNTTGG	2 cut(s)	764, 796
Alw26I	GTCTC	4 cut(s)	551, 797, 1199, 2804
AlwI	GGATC	1 cut(s)	1728
AoxI	GGCC	2 cut(s)	313, 1866
ApeKI	GCWGC	6 cut(s)	872, 1307, 2443, 2488, 2558, 2732
ApoI	RAATTY	8 cut(s)	85, 1043, 1463, 1532, 1955, 2138, 2335, 2528
ArsI	GACNNNNNNTTYG	4 cut(s)	1198, 1230, 1940, 1972
Asp700I	GAANNNNTTC	3 cut(s)	390, 1005, 2391
Asp718I	GGTACC	1 cut(s)	1888
AspS9I	GGNCC	5 cut(s)	80, 171, 1430, 1739, 2086
AsuC2I	CCSGG	1 cut(s)	197
AsuHPI	GGTGA	8 cut(s)	104, 212, 259, 509, 1454, 1529, 1826, 2552
AsuNHI	GCTAGC	1 cut(s)	2623
AvaII	GGWCC	5 cut(s)	80, 171, 1430, 1739, 2086
BalI	TGGCCA	1 cut(s)	315
BanI	GGYRCC	2 cut(s)	1888, 2329
BbsI	GAAGAC	1 cut(s)	1983
BbvI	GCAGC	6 cut(s)	859, 1294, 2455, 2475, 2545, 2744
BccI	CCATC	9 cut(s)	7, 305, 395, 848, 997, 1107, 1514, 1694, 2021
BciT130I	CCWGG	2 cut(s)	382, 1870
BciVI	GTATCC	2 cut(s)	10, 203
BclI	TGATCA	3 cut(s)	444, 1171, 2601
BcnI	CCSGG	1 cut(s)	197
BcoDI	GTCTC	4 cut(s)	551, 797, 1199, 2804
BfaI	CTAG	8 cut(s)	656, 993, 1137, 1562, 1968, 2184, 2624, 2772
BfmI	CTRYAG	1 cut(s)	1326
BfuAI	ACCTGC	3 cut(s)	132, 2249, 2670
BfuI	GTATCC	2 cut(s)	10, 203
BglI	GCCNNNNNGGC	1 cut(s)	1874
BglII	AGATCT	1 cut(s)	1125
BisI	GCNGC	7 cut(s)	711, 873, 1308, 2444, 2489, 2559, 2733
BlpI	GCTNAGC	2 cut(s)	338, 1920
BlsI	GCNGC	7 cut(s)	712, 874, 1309, 2445, 2490, 2560, 2734
BmcAI	AGTACT	1 cut(s)	1225
Bme1390I	CCNGG	3 cut(s)	197, 382, 1870
Bme18I	GGWCC	5 cut(s)	80, 171, 1430, 1739, 2086
BmgT120I	GGNCC	5 cut(s)	80, 171, 1430, 1739, 2086
BmiI	GGNNCC	3 cut(s)	522, 1890, 2331
BmrFI	CCNGG	3 cut(s)	197, 382, 1870
BmsI	GCATC	4 cut(s)	103, 1750, 2162, 2245
BmtI	GCTAGC	1 cut(s)	2627
BpiI	GAAGAC	1 cut(s)	1983
BpmI	CTGGAG	4 cut(s)	42, 471, 745, 1655
Bpu1102I	GCTNAGC	2 cut(s)	338, 1920
BpuEI	CTTGAG	2 cut(s)	68, 2633
BpuMI	CCSGG	1 cut(s)	197
BsaBI	GATNNNNATC	2 cut(s)	443, 2046
BsaHI	GRCGYC	2 cut(s)	501, 1648
BsaI	GGTCTC	1 cut(s)	797
BsaJI	CCNNGG	3 cut(s)	380, 381, 1401
Bsc4I	CCNNNNNNNGG	5 cut(s)	89, 1174, 1439, 2064, 2339
Bse1I	ACTGG	7 cut(s)	25, 454, 528, 707, 762, 1432, 1638
Bse3DI	GCAATG	2 cut(s)	2350, 2416
Bse8I	GATNNNNATC	2 cut(s)	443, 2046
BseBI	CCWGG	2 cut(s)	382, 1870
BseDI	CCNNGG	3 cut(s)	380, 381, 1401
BseGI	GGATG	6 cut(s)	271, 985, 1258, 1669, 2604, 2620
BseJI	GATNNNNATC	2 cut(s)	443, 2046
BseLI	CCNNNNNNNGG	5 cut(s)	89, 1174, 1439, 2064, 2339
BseMI	GCAATG	2 cut(s)	2350, 2416
BseMII	CTCAG	5 cut(s)	52, 918, 1461, 1911, 2462
BseNI	ACTGG	7 cut(s)	25, 454, 528, 707, 762, 1432, 1638
BseRI	GAGGAG	2 cut(s)	848, 1884
BseXI	GCAGC	6 cut(s)	859, 1294, 2455, 2475, 2545, 2744
BseYI	CCCAGC	1 cut(s)	828
BshFI	GGCC	2 cut(s)	315, 1868
BshNI	GGYRCC	2 cut(s)	1888, 2329
BsiSI	CCGG	2 cut(s)	196, 546
BslFI	GGGAC	4 cut(s)	212, 225, 1296, 1592
BslI	CCNNNNNNNGG	5 cut(s)	89, 1174, 1439, 2064, 2339
BsmAI	GTCTC	4 cut(s)	551, 797, 1199, 2804
BsmFI	GGGAC	4 cut(s)	212, 225, 1296, 1592
BsmI	GAATGC	2 cut(s)	113, 745
BsnI	GGCC	2 cut(s)	315, 1868
Bso31I	GGTCTC	1 cut(s)	797
Bsp143I	GATC	7 cut(s)	444, 1125, 1171, 1720, 2041, 2601, 2719
Bsp1720I	GCTNAGC	2 cut(s)	338, 1920
BspACI	CCGC	1 cut(s)	711
BspANI	GGCC	2 cut(s)	315, 1868
BspCNI	CTCAG	5 cut(s)	51, 917, 1460, 1912, 2461
BspHI	TCATGA	1 cut(s)	886
BspLI	GGNNCC	3 cut(s)	522, 1890, 2331
BspMAI	CTGCAG	1 cut(s)	1330
BspMI	ACCTGC	3 cut(s)	132, 2249, 2670
BspOI	GCTAGC	1 cut(s)	2627
BspPI	GGATC	1 cut(s)	1728
BspT107I	GGYRCC	2 cut(s)	1888, 2329
BspTNI	GGTCTC	1 cut(s)	797
BsrDI	GCAATG	2 cut(s)	2350, 2416
BsrI	ACTGG	7 cut(s)	25, 454, 528, 707, 762, 1432, 1638
BssECI	CCNNGG	3 cut(s)	380, 381, 1401
BssMI	GATC	7 cut(s)	444, 1125, 1171, 1720, 2041, 2601, 2719
BssNAI	GTATAC	1 cut(s)	757
BssNI	GRCGYC	2 cut(s)	501, 1648
BssT1I	CCWWGG	1 cut(s)	1401
Bst1107I	GTATAC	1 cut(s)	757
Bst2UI	CCWGG	2 cut(s)	382, 1870
Bst4CI	ACNGT	8 cut(s)	61, 976, 1261, 1287, 1322, 2147, 2278, 2290
Bst6I	CTCTTC	2 cut(s)	255, 1554
BstACI	GRCGYC	2 cut(s)	501, 1648
BstAPI	GCANNNNNTGC	1 cut(s)	1856
BstC8I	GCNNGC	2 cut(s)	2625, 2629
BstF5I	GGATG	6 cut(s)	271, 985, 1258, 1669, 2604, 2620
BstKTI	GATC	7 cut(s)	447, 1128, 1174, 1723, 2044, 2604, 2722
BstMAI	GTCTC	4 cut(s)	551, 797, 1199, 2804
BstMBI	GATC	7 cut(s)	444, 1125, 1171, 1720, 2041, 2601, 2719
BstMWI	GCNNNNNNNGC	4 cut(s)	1856, 1865, 1874, 2791
BstNI	CCWGG	2 cut(s)	382, 1870
BstNSI	RCATGY	6 cut(s)	218, 675, 2081, 2115, 2251, 2558
BstSCI	CCNGG	3 cut(s)	195, 380, 1868
BstSFI	CTRYAG	1 cut(s)	1326
BstV1I	GCAGC	6 cut(s)	859, 1294, 2455, 2475, 2545, 2744
BstV2I	GAAGAC	1 cut(s)	1983
BstX2I	RGATCY	1 cut(s)	1125
BstXI	CCANNNNNNTGG	1 cut(s)	1201
BstYI	RGATCY	1 cut(s)	1125
BstZ17I	GTATAC	1 cut(s)	757
BsuI	GTATCC	2 cut(s)	10, 203
BsuRI	GGCC	2 cut(s)	315, 1868
BtgZI	GCGATG	1 cut(s)	126
BtsCI	GGATG	6 cut(s)	271, 985, 1258, 1669, 2604, 2620
BtsI	GCAGTG	2 cut(s)	1857, 2801
BtsIMutI	CAGTG	7 cut(s)	46, 447, 535, 1266, 1857, 2590, 2801
BveI	ACCTGC	3 cut(s)	132, 2249, 2670
Cac8I	GCNNGC	2 cut(s)	2625, 2629
CciI	TCATGA	1 cut(s)	886
Cfr13I	GGNCC	5 cut(s)	80, 171, 1430, 1739, 2086
CseI	GACGC	2 cut(s)	509, 1637
Csp6I	GTAC	7 cut(s)	653, 768, 1224, 1323, 1889, 2262, 2350
CviQI	GTAC	7 cut(s)	653, 768, 1224, 1323, 1889, 2262, 2350
DpnI	GATC	7 cut(s)	446, 1127, 1173, 1722, 2043, 2603, 2721
DpnII	GATC	7 cut(s)	444, 1125, 1171, 1720, 2041, 2601, 2719
DraI	TTTAAA	2 cut(s)	865, 2644
EaeI	YGGCCR	1 cut(s)	313
Eam1104I	CTCTTC	2 cut(s)	255, 1554
EarI	CTCTTC	2 cut(s)	255, 1554
Eco130I	CCWWGG	1 cut(s)	1401
Eco147I	AGGCCT	1 cut(s)	1868
Eco31I	GGTCTC	1 cut(s)	797
Eco32I	GATATC	1 cut(s)	324
Eco47I	GGWCC	5 cut(s)	80, 171, 1430, 1739, 2086
Eco57I	CTGAAG	1 cut(s)	1977
EcoRII	CCWGG	2 cut(s)	380, 1868
EcoRV	GATATC	1 cut(s)	324
EcoT14I	CCWWGG	1 cut(s)	1401
ErhI	CCWWGG	1 cut(s)	1401
FalI	AAGNNNNNCTT	6 cut(s)	633, 665, 1139, 1171, 2405, 2437
FaqI	GGGAC	4 cut(s)	212, 225, 1296, 1592
FauNDI	CATATG	2 cut(s)	1359, 2675
FbaI	TGATCA	3 cut(s)	444, 1171, 2601
FblI	GTMKAC	3 cut(s)	668, 756, 2505
Fnu4HI	GCNGC	7 cut(s)	711, 873, 1308, 2444, 2489, 2559, 2733
FokI	GGATG	6 cut(s)	278, 972, 1265, 1676, 2611, 2627
Fsp4HI	GCNGC	7 cut(s)	711, 873, 1308, 2444, 2489, 2559, 2733
FspBI	CTAG	8 cut(s)	656, 993, 1137, 1562, 1968, 2184, 2624, 2772
GluI	GCNGC	7 cut(s)	711, 873, 1308, 2444, 2489, 2559, 2733
GsaI	CCCAGC	1 cut(s)	832
GsuI	CTGGAG	4 cut(s)	42, 471, 745, 1655
HaeIII	GGCC	2 cut(s)	315, 1868
HapII	CCGG	2 cut(s)	196, 546
HgaI	GACGC	2 cut(s)	509, 1637
Hin1I	GRCGYC	2 cut(s)	501, 1648
HincII	GTYRAC	3 cut(s)	1603, 1786, 2685
HindII	GTYRAC	3 cut(s)	1603, 1786, 2685
HindIII	AAGCTT	1 cut(s)	2266
HinfI	GANTC	4 cut(s)	665, 918, 1445, 2166
HpaII	CCGG	2 cut(s)	196, 546
HphI	GGTGA	8 cut(s)	104, 212, 259, 509, 1454, 1529, 1826, 2552
Hpy188I	TCNGA	5 cut(s)	785, 907, 1996, 2451, 2552
Hpy188III	TCNNGA	6 cut(s)	887, 1349, 1562, 1589, 2658, 2772
HpyCH4III	ACNGT	8 cut(s)	61, 976, 1261, 1287, 1322, 2147, 2278, 2290
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1856, 1865, 1874, 2791
Hsp92I	GRCGYC	2 cut(s)	501, 1648
KpnI	GGTACC	1 cut(s)	1892
Ksp22I	TGATCA	3 cut(s)	444, 1171, 2601
Kzo9I	GATC	7 cut(s)	444, 1125, 1171, 1720, 2041, 2601, 2719
LmnI	GCTCC	2 cut(s)	334, 1405
Lsp1109I	GCAGC	6 cut(s)	859, 1294, 2455, 2475, 2545, 2744
LweI	GCATC	4 cut(s)	103, 1750, 2162, 2245
MaeI	CTAG	8 cut(s)	656, 993, 1137, 1562, 1968, 2184, 2624, 2772
MaeIII	GTNAC	9 cut(s)	55, 497, 1031, 1117, 1255, 1442, 1669, 1771, 1798
MalI	GATC	7 cut(s)	446, 1127, 1173, 1722, 2043, 2603, 2721
MboI	GATC	7 cut(s)	444, 1125, 1171, 1720, 2041, 2601, 2719
MboII	GAAGA	8 cut(s)	272, 653, 891, 1114, 1485, 1541, 1983, 2399
MflI	RGATCY	1 cut(s)	1125
MlsI	TGGCCA	1 cut(s)	315
MluNI	TGGCCA	1 cut(s)	315
MlyI	GAGTC	2 cut(s)	674, 1439
MmeI	TCCRAC	2 cut(s)	312, 723
Mox20I	TGGCCA	1 cut(s)	315
MroXI	GAANNNNTTC	3 cut(s)	390, 1005, 2391
MscI	TGGCCA	1 cut(s)	315
MslI	CAYNNNNRTG	3 cut(s)	399, 676, 1262
Msp20I	TGGCCA	1 cut(s)	315
MspI	CCGG	2 cut(s)	196, 546
MspR9I	CCNGG	3 cut(s)	197, 382, 1870
MssI	GTTTAAAC	1 cut(s)	2644
Mva1269I	GAATGC	2 cut(s)	113, 745
MvaI	CCWGG	2 cut(s)	382, 1870
MwoI	GCNNNNNNNGC	4 cut(s)	1856, 1865, 1874, 2791
NciI	CCSGG	1 cut(s)	197
NdeI	CATATG	2 cut(s)	1359, 2675
NdeII	GATC	7 cut(s)	444, 1125, 1171, 1720, 2041, 2601, 2719
NheI	GCTAGC	1 cut(s)	2623
NlaIV	GGNNCC	3 cut(s)	522, 1890, 2331
NmuCI	GTSAC	5 cut(s)	497, 1255, 1442, 1771, 1798
NspI	RCATGY	6 cut(s)	218, 675, 2081, 2115, 2251, 2558
PagI	TCATGA	1 cut(s)	886
PaqCI	CACCTGC	1 cut(s)	132
PasI	CCCWGGG	1 cut(s)	381
PceI	AGGCCT	1 cut(s)	1868
PciI	ACATGT	4 cut(s)	214, 671, 2111, 2247
PcsI	WCGNNNNNNNCGW	1 cut(s)	789
PctI	GAATGC	2 cut(s)	113, 745
PdmI	GAANNNNTTC	3 cut(s)	390, 1005, 2391
PfeI	GAWTC	2 cut(s)	918, 2166
PflMI	CCANNNNNTGG	1 cut(s)	2339
PfoI	TCCNGGA	1 cut(s)	195
PkrI	GCNGC	7 cut(s)	712, 874, 1309, 2445, 2490, 2560, 2734
PleI	GAGTC	2 cut(s)	673, 1439
PmeI	GTTTAAAC	1 cut(s)	2644
PpsI	GAGTC	2 cut(s)	673, 1439
PscI	ACATGT	4 cut(s)	214, 671, 2111, 2247
PsiI	TTATAA	2 cut(s)	255, 2808
Psp6I	CCWGG	2 cut(s)	380, 1868
PspFI	CCCAGC	1 cut(s)	828
PspGI	CCWGG	2 cut(s)	380, 1868
PspN4I	GGNNCC	3 cut(s)	522, 1890, 2331
PspPI	GGNCC	5 cut(s)	80, 171, 1430, 1739, 2086
PsrI	GAACNNNNNNTAC	2 cut(s)	636, 668
PstI	CTGCAG	1 cut(s)	1330
PsuI	RGATCY	1 cut(s)	1125
RsaI	GTAC	7 cut(s)	654, 769, 1225, 1324, 1890, 2263, 2351
RsaNI	GTAC	7 cut(s)	653, 768, 1224, 1323, 1889, 2262, 2350
RseI	CAYNNNNRTG	3 cut(s)	399, 676, 1262
SatI	GCNGC	7 cut(s)	711, 873, 1308, 2444, 2489, 2559, 2733
Sau3AI	GATC	7 cut(s)	444, 1125, 1171, 1720, 2041, 2601, 2719
Sau96I	GGNCC	5 cut(s)	80, 171, 1430, 1739, 2086
ScaI	AGTACT	1 cut(s)	1225
SchI	GAGTC	2 cut(s)	674, 1439
ScrFI	CCNGG	3 cut(s)	197, 382, 1870
SfaNI	GCATC	4 cut(s)	103, 1750, 2162, 2245
SfcI	CTRYAG	1 cut(s)	1326
SinI	GGWCC	5 cut(s)	80, 171, 1430, 1739, 2086
SmiMI	CAYNNNNRTG	3 cut(s)	399, 676, 1262
SmlI	CTYRAG	2 cut(s)	47, 2648
SmoI	CTYRAG	2 cut(s)	47, 2648
SseBI	AGGCCT	1 cut(s)	1868
SsiI	CCGC	1 cut(s)	711
SspI	AATATT	1 cut(s)	1163
SspMI	CTAG	8 cut(s)	656, 993, 1137, 1562, 1968, 2184, 2624, 2772
StuI	AGGCCT	1 cut(s)	1868
StyD4I	CCNGG	3 cut(s)	195, 380, 1868
StyI	CCWWGG	1 cut(s)	1401
TaaI	ACNGT	8 cut(s)	61, 976, 1261, 1287, 1322, 2147, 2278, 2290
TaqI	TCGA	3 cut(s)	480, 792, 1040
TatI	WGTACW	3 cut(s)	652, 1223, 1322
TauI	GCSGC	1 cut(s)	713
TfiI	GAWTC	2 cut(s)	918, 2166
TscAI	CASTG	7 cut(s)	46, 454, 535, 1266, 1857, 2590, 2801
TseFI	GTSAC	5 cut(s)	497, 1255, 1442, 1771, 1798
TseI	GCWGC	6 cut(s)	872, 1307, 2443, 2488, 2558, 2732
Tsp45I	GTSAC	5 cut(s)	497, 1255, 1442, 1771, 1798
TspRI	CASTG	7 cut(s)	46, 454, 535, 1266, 1857, 2590, 2801
Van91I	CCANNNNNTGG	1 cut(s)	2339
VpaK11BI	GGWCC	5 cut(s)	80, 171, 1430, 1739, 2086
XapI	RAATTY	8 cut(s)	85, 1043, 1463, 1532, 1955, 2138, 2335, 2528
XbaI	TCTAGA	2 cut(s)	1561, 2771
XceI	RCATGY	6 cut(s)	218, 675, 2081, 2115, 2251, 2558
XmiI	GTMKAC	3 cut(s)	668, 756, 2505
XmnI	GAANNNNTTC	3 cut(s)	390, 1005, 2391
XspI	CTAG	8 cut(s)	656, 993, 1137, 1562, 1968, 2184, 2624, 2772
ZrmI	AGTACT	1 cut(s)	1225

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.