Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001538

Physical Location & Seq

Genomic Coordinates Reverse (-)

64400494 .. 64402227

Gene Structure 1734 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010224

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGTGACTAATTTCACACAACCAAACCCTTACCCACCTCCGCCACACAACCCTTCTACAACCATTATCAATGGCCACTTACTCCCTCATCAATTTCCATGTGTTCCTCAGACTCACTCACAGTTCTTCCCACCTCCATACTTGCAACCGATTCATCCTATTGCTCCGCAGCCACTCACCACAACTCCTCAAAGCCCATCAATCCCCACTTACCACTCACCTCATCCCACCCCAAATATTGGGATTCATCATTCAATTCCAAACTTTCAGTCACCCGCAGCCCCCACTTTTGTGCCCCTACCTCAATTTACAGATCCCAAACCTCCATCGTGTTTTCGTTCAGTGGGTGACTGTGAGCCCCTAGCTCTATTCACGGGTCGGATCCAACCCATATCATCTTCCTCTTCTTTATCATCCGAGCCACACACCTACCTTGCAGAGGCAACAAATCCATCTTCTCTGCCACCAATTTCCGGTGTTCCGGAGCAAATGGAGGTTCTCCATTCCAAGCTCGCCGTCTCCACCCTCATAGAAGAGCTCCAGAAGCCTCGCCAGTCCCTCTCCGTTGCCGAGGAGGTCAACCTCGCCGTTCAGGTCGACCTCGCTTCACCGAGCCGGAATCGCGATGCGAAAGTCAAACGCAACAACGTCGTCATCTCCAAGGGCATGGACCTTGCAGTTTTGGAGGCGTTAGAGAAGGGAACCACACTGGAAGTACTCGACCCTCAAACCGTAAAGAAGCTGGTTCTGGCCTTGGAGCCCGCTCAAGTCCTACTGGATGTGCTTGTCGACAACAATGTTCTCGAGCTTTTGGTTCAAAATCTGCTCCGATTATCCAATTCCAACCCCGATGAGATGGCCGCCGTCTATAGTACTCTCGCTACAATTGAGAATCTGTTCAATTGTTTGTGTGGGTTGTTAACGCCATTGGAGAACAGGGACATTAGTGCTGGAATCAAGGAAGAAGAAAGTAGAAGAGCTGTTGGTGATAATTCTCTCAGGGAATTGGCTCACGTCTTTGACATTAAGGGTAAAGTGGAGTTGACAAATAAACTTTGTGAGAAATTGTTCAAAGAGAAGGATCAACATCAAGACATTGCCAGCATAGCTATGAAGGCTATGGTTGCAGAAGTTTCTATTCAATCACTTGCACAGCTTATTCTTGTGTCTATTTTACCGCAGTTGATTAAAGGAATTACTGCCCTGGGAATGAATACAAAGATAAAATGTGCTCTCTTGTCTCAGTTGAGTCCTAATCAAACAAGTGTAAGGAAGAAAACTGTGTCATGCATCTCATCACTTGTTTCAAGCTTGTCAGATGATTTGTTGGCAAAGGATACTATTGGAGTTGTTCAGCACTTGAGCAATAAAGGCTCAAAGTCTGAAATGGCTCAAACCACTTTGTCTCAGTGCTTTCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009987 GO:0010033 GO:0010051 GO:0010228 GO:0010265 GO:0016020 GO:0016043 GO:0016567 GO:0019538 GO:0022414 GO:0022607 GO:0030312 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458 GO:0065003 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TIP120

Protein Analysis

474

Amino Acids

51.43

Weight (kDa)

6.17

Isoelectric Point (pI)

47.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTNNBL	PF08216	250 - 301	1.1e-07	Catenin-beta-like, Arm-motif containing nuclear

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001538)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g15102 FvH4_1g18481 FvH4_1g23805 FvH4_1g23806 FvH4_1g24581 FvH4_2g20031 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g23161 FvH4_3g29863 FvH4_3g30141 FvH4_3g31747 FvH4_4g00983 FvH4_4g08481 FvH4_4g08541 FvH4_4g14020 FvH4_4g35090 FvH4_4g35091 FvH4_6g33521 FvH4_6g37662 FvH4_6g39361 FvH4_6g39362 FvH4_7g11680 FvH4_7g14385 FvH4_7g27352 FvH4_7g27353 FvH4_7g28392
pyrus_communis	pycom07g27700
rosa_chinensis	RchiOBHm_Chr3g0481561 RchiOBHm_Chr5g0002281
rosa_laevigata	RLG00000010224 RLG00000028985
rosa_multiflora	Rmu_co8150836.1_g000001 Rmu_sc0001141.1_g000014 Rmu_sc0003002.1_g000038 Rmu_sc0010050.1_g000004 Rmu_sc0033439.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130360 Rroxscaffold_3G00239170 Rroxscaffold_3G00245770 Rroxscaffold_4G00314270 Rroxscaffold_5G00333350 Rroxscaffold_5G00382830
rosa_samantha	Rh1BG051600 Rh7BG317500 Rh7BG317600 Rh7CG294600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	239
AccBSI	CCGCTC	1 cut(s)	764
AccI	GTMKAC	2 cut(s)	597, 789
AccII	CGCG	1 cut(s)	624
AccIII	TCCGGA	1 cut(s)	481
AciI	CCGC	6 cut(s)	41, 167, 276, 762, 861, 1178
AclWI	GGATC	4 cut(s)	308, 376, 389, 1089
AcoI	YGGCCR	2 cut(s)	73, 858
AfaI	GTAC	2 cut(s)	717, 874
AfiI	CCNNNNNNNGG	3 cut(s)	239, 439, 473
AgsI	TTSAA	7 cut(s)	255, 818, 901, 1072, 1142, 1308, 1418
AjiI	CACGTC	1 cut(s)	1015
AjnI	CCWGG	1 cut(s)	1203
AleI	CACNNNNGTG	1 cut(s)	290
AluBI	AGCT	9 cut(s)	365, 511, 538, 742, 808, 980, 1109, 1156, 1311
AluI	AGCT	9 cut(s)	365, 511, 538, 742, 808, 980, 1109, 1156, 1311
Alw21I	GWGCWC	2 cut(s)	540, 1234
Alw26I	GTCTC	3 cut(s)	523, 1245, 1410
AlwI	GGATC	4 cut(s)	308, 376, 389, 1089
Ama87I	CYCGRG	1 cut(s)	803
Aor13HI	TCCGGA	1 cut(s)	481
AoxI	GGCC	3 cut(s)	73, 750, 858
ApeKI	GCWGC	2 cut(s)	169, 278
ArsI	GACNNNNNNTTYG	2 cut(s)	254, 286
Asp700I	GAANNNNTTC	2 cut(s)	896, 1067
AspS9I	GGNCC	1 cut(s)	670
AsuHPI	GGTGA	7 cut(s)	16, 169, 210, 264, 359, 600, 998
AvaI	CYCGRG	1 cut(s)	803
AvaII	GGWCC	1 cut(s)	670
BaeGI	GKGCMC	1 cut(s)	297
BalI	TGGCCA	1 cut(s)	75
BamHI	GGATCC	1 cut(s)	381
BanII	GRGCYC	3 cut(s)	360, 540, 762
Bbv12I	GWGCWC	2 cut(s)	540, 1234
BbvI	GCAGC	2 cut(s)	181, 290
BccI	CCATC	4 cut(s)	205, 334, 460, 850
BceAI	ACGGC	3 cut(s)	500, 572, 848
BcgI	CGANNNNNNTGC	2 cut(s)	631, 665
BciT130I	CCWGG	1 cut(s)	1205
BciVI	GTATCC	1 cut(s)	1330
BcoDI	GTCTC	3 cut(s)	523, 1245, 1410
BfaI	CTAG	1 cut(s)	362
BfmI	CTRYAG	1 cut(s)	868
BfuI	GTATCC	1 cut(s)	1330
BisI	GCNGC	3 cut(s)	170, 279, 861
BlsI	GCNGC	3 cut(s)	171, 280, 862
BmcAI	AGTACT	2 cut(s)	717, 874
Bme1390I	CCNGG	1 cut(s)	1205
Bme18I	GGWCC	1 cut(s)	670
BmeT110I	CYCGRG	1 cut(s)	803
BmgBI	CACGTC	1 cut(s)	1015
BmgT120I	GGNCC	1 cut(s)	670
BmiI	GGNNCC	3 cut(s)	383, 703, 759
BmrFI	CCNGG	1 cut(s)	1205
BmsI	GCATC	2 cut(s)	616, 1299
BpmI	CTGGAG	1 cut(s)	524
BpuEI	CTTGAG	2 cut(s)	750, 1381
BsaBI	GATNNNNATC	1 cut(s)	1086
BsaJI	CCNNGG	5 cut(s)	570, 660, 753, 1203, 1204
BsaWI	WCCGGW	2 cut(s)	473, 481
BsaXI	ACNNNNNCTCC	2 cut(s)	169, 199
Bsc4I	CCNNNNNNNGG	3 cut(s)	239, 439, 473
Bse1I	ACTGG	3 cut(s)	553, 714, 780
Bse3DI	GCAATG	1 cut(s)	1095
Bse8I	GATNNNNATC	1 cut(s)	1086
BseAI	TCCGGA	1 cut(s)	481
BseBI	CCWGG	1 cut(s)	1205
BseDI	CCNNGG	5 cut(s)	570, 660, 753, 1203, 1204
BseGI	GGATG	4 cut(s)	154, 223, 413, 784
BseJI	GATNNNNATC	1 cut(s)	1086
BseLI	CCNNNNNNNGG	3 cut(s)	239, 439, 473
BseMI	GCAATG	1 cut(s)	1095
BseMII	CTCAG	4 cut(s)	122, 1012, 1256, 1421
BseNI	ACTGG	3 cut(s)	553, 714, 780
BseRI	GAGGAG	2 cut(s)	177, 587
BseSI	GKGCMC	1 cut(s)	297
BseXI	GCAGC	2 cut(s)	181, 290
Bsh1236I	CGCG	1 cut(s)	624
BshFI	GGCC	3 cut(s)	75, 752, 860
BsiHKAI	GWGCWC	2 cut(s)	540, 1234
BsiHKCI	CYCGRG	1 cut(s)	803
BsiSI	CCGG	3 cut(s)	474, 482, 616
BslFI	GGGAC	2 cut(s)	541, 953
BslI	CCNNNNNNNGG	3 cut(s)	239, 439, 473
BsmAI	GTCTC	3 cut(s)	523, 1245, 1410
BsmBI	CGTCTC	1 cut(s)	523
BsmFI	GGGAC	2 cut(s)	541, 953
BsnI	GGCC	3 cut(s)	75, 752, 860
BsoBI	CYCGRG	1 cut(s)	803
Bsp1286I	GDGCHC	5 cut(s)	297, 360, 540, 762, 1234
Bsp13I	TCCGGA	1 cut(s)	481
Bsp143I	GATC	3 cut(s)	313, 381, 1081
Bsp68I	TCGCGA	1 cut(s)	624
BspACI	CCGC	6 cut(s)	41, 167, 276, 762, 861, 1178
BspANI	GGCC	3 cut(s)	75, 752, 860
BspCNI	CTCAG	4 cut(s)	121, 1011, 1255, 1420
BspEI	TCCGGA	1 cut(s)	481
BspFNI	CGCG	1 cut(s)	624
BspLI	GGNNCC	3 cut(s)	383, 703, 759
BspPI	GGATC	4 cut(s)	308, 376, 389, 1089
BspQI	GCTCTTC	2 cut(s)	528, 970
BsrBI	CCGCTC	1 cut(s)	764
BsrDI	GCAATG	1 cut(s)	1095
BsrI	ACTGG	3 cut(s)	553, 714, 780
BssECI	CCNNGG	5 cut(s)	570, 660, 753, 1203, 1204
BssMI	GATC	3 cut(s)	313, 381, 1081
BssT1I	CCWWGG	2 cut(s)	660, 753
Bst2UI	CCWGG	1 cut(s)	1205
Bst4CI	ACNGT	4 cut(s)	123, 353, 733, 1282
Bst6I	CTCTTC	3 cut(s)	409, 528, 970
BstC8I	GCNNGC	3 cut(s)	513, 762, 1102
BstDEI	CTNAG	4 cut(s)	108, 998, 1242, 1407
BstENI	CCTNNNNNAGG	1 cut(s)	437
BstF5I	GGATG	4 cut(s)	154, 223, 413, 784
BstFNI	CGCG	1 cut(s)	624
BstKTI	GATC	3 cut(s)	316, 384, 1084
BstMAI	GTCTC	3 cut(s)	523, 1245, 1410
BstMBI	GATC	3 cut(s)	313, 381, 1081
BstMWI	GCNNNNNNNGC	6 cut(s)	544, 621, 1106, 1115, 1124, 1371
BstNI	CCWGG	1 cut(s)	1205
BstSCI	CCNGG	1 cut(s)	1203
BstSFI	CTRYAG	1 cut(s)	868
BstSLI	GKGCMC	1 cut(s)	297
BstUI	CGCG	1 cut(s)	624
BstV1I	GCAGC	2 cut(s)	181, 290
BstX2I	RGATCY	2 cut(s)	313, 381
BstXI	CCANNNNNNTGG	1 cut(s)	667
BstYI	RGATCY	2 cut(s)	313, 381
BsuI	GTATCC	1 cut(s)	1330
BsuRI	GGCC	3 cut(s)	75, 752, 860
BtgZI	GCGATG	1 cut(s)	639
BtrI	CACGTC	1 cut(s)	1015
BtsCI	GGATG	4 cut(s)	154, 223, 413, 784
BtsIMutI	CAGTG	3 cut(s)	348, 707, 1415
BtuMI	TCGCGA	1 cut(s)	624
Cac8I	GCNNGC	3 cut(s)	513, 762, 1102
Cfr13I	GGNCC	1 cut(s)	670
Csp6I	GTAC	2 cut(s)	716, 873
CviAII	CATG	3 cut(s)	99, 667, 1287
CviQI	GTAC	2 cut(s)	716, 873
DdeI	CTNAG	4 cut(s)	108, 998, 1242, 1407
DpnI	GATC	3 cut(s)	315, 383, 1083
DpnII	GATC	3 cut(s)	313, 381, 1081
EaeI	YGGCCR	2 cut(s)	73, 858
Eam1104I	CTCTTC	3 cut(s)	409, 528, 970
EarI	CTCTTC	3 cut(s)	409, 528, 970
EciI	GGCGGA	1 cut(s)	30
Ecl136II	GAGCTC	1 cut(s)	538
Eco130I	CCWWGG	2 cut(s)	660, 753
Eco24I	GRGCYC	3 cut(s)	360, 540, 762
Eco47I	GGWCC	1 cut(s)	670
Eco53kI	GAGCTC	1 cut(s)	538
Eco88I	CYCGRG	1 cut(s)	803
EcoICRI	GAGCTC	1 cut(s)	538
EcoNI	CCTNNNNNAGG	1 cut(s)	437
EcoRII	CCWGG	1 cut(s)	1203
EcoT14I	CCWWGG	2 cut(s)	660, 753
EcoT22I	ATGCAT	1 cut(s)	1292
EcoT38I	GRGCYC	3 cut(s)	360, 540, 762
ErhI	CCWWGG	2 cut(s)	660, 753
Esp3I	CGTCTC	1 cut(s)	523
FaeI	CATG	3 cut(s)	102, 670, 1290
FaqI	GGGAC	2 cut(s)	541, 953
FatI	CATG	3 cut(s)	98, 666, 1286
FauI	CCCGC	2 cut(s)	283, 769
FblI	GTMKAC	2 cut(s)	597, 789
Fnu4HI	GCNGC	3 cut(s)	170, 279, 861
FokI	GGATG	4 cut(s)	141, 210, 400, 791
FriOI	GRGCYC	3 cut(s)	360, 540, 762
Fsp4HI	GCNGC	3 cut(s)	170, 279, 861
FspBI	CTAG	1 cut(s)	362
GluI	GCNGC	3 cut(s)	170, 279, 861
GsuI	CTGGAG	1 cut(s)	524
HaeIII	GGCC	3 cut(s)	75, 752, 860
HapII	CCGG	3 cut(s)	474, 482, 616
Hin1II	CATG	3 cut(s)	102, 670, 1290
HincII	GTYRAC	5 cut(s)	580, 598, 790, 921, 1044
HindII	GTYRAC	5 cut(s)	580, 598, 790, 921, 1044
HindIII	AAGCTT	1 cut(s)	1309
HinfI	GANTC	7 cut(s)	112, 151, 244, 619, 892, 954, 1249
HpaI	GTTAAC	1 cut(s)	921
HpaII	CCGG	3 cut(s)	474, 482, 616
HphI	GGTGA	7 cut(s)	16, 169, 210, 264, 359, 600, 998
Hpy166II	GTNNAC	5 cut(s)	580, 598, 790, 921, 1044
Hpy188I	TCNGA	6 cut(s)	111, 381, 418, 830, 1318, 1384
Hpy188III	TCNNGA	5 cut(s)	482, 541, 623, 803, 1091
Hpy8I	GTNNAC	5 cut(s)	580, 598, 790, 921, 1044
Hpy99I	CGWCG	1 cut(s)	653
HpyAV	CCTTC	4 cut(s)	63, 691, 1072, 1108
HpyCH4III	ACNGT	4 cut(s)	123, 353, 733, 1282
HpyCH4IV	ACGT	2 cut(s)	648, 1014
HpyCH4V	TGCA	6 cut(s)	145, 437, 677, 1127, 1151, 1290
HpyF10VI	GCNNNNNNNGC	6 cut(s)	544, 621, 1106, 1115, 1124, 1371
HpyF3I	CTNAG	4 cut(s)	108, 998, 1242, 1407
HpySE526I	ACGT	2 cut(s)	648, 1014
Hsp92II	CATG	3 cut(s)	102, 670, 1290
Kpn2I	TCCGGA	1 cut(s)	481
KspAI	GTTAAC	1 cut(s)	921
Kzo9I	GATC	3 cut(s)	313, 381, 1081
LguI	GCTCTTC	2 cut(s)	528, 970
LmnI	GCTCC	5 cut(s)	169, 484, 543, 757, 831
Lsp1109I	GCAGC	2 cut(s)	181, 290
LweI	GCATC	2 cut(s)	616, 1299
MaeI	CTAG	1 cut(s)	362
MaeII	ACGT	2 cut(s)	648, 1014
MaeIII	GTNAC	3 cut(s)	4, 270, 347
MalI	GATC	3 cut(s)	315, 383, 1083
MbiI	CCGCTC	1 cut(s)	764
MboI	GATC	3 cut(s)	313, 381, 1081
MboII	GAAGA	9 cut(s)	118, 390, 396, 447, 545, 974, 977, 987, 1285
MfeI	CAATTG	2 cut(s)	885, 901
MflI	RGATCY	2 cut(s)	313, 381
MhlI	GDGCHC	5 cut(s)	297, 360, 540, 762, 1234
MlsI	TGGCCA	1 cut(s)	75
MluNI	TGGCCA	1 cut(s)	75
MlyI	GAGTC	2 cut(s)	106, 1258
MmeI	TCCRAC	3 cut(s)	359, 409, 867
Mox20I	TGGCCA	1 cut(s)	75
Mph1103I	ATGCAT	1 cut(s)	1292
MroI	TCCGGA	1 cut(s)	481
MroXI	GAANNNNTTC	2 cut(s)	896, 1067
MscI	TGGCCA	1 cut(s)	75
MseI	TTAA	3 cut(s)	920, 1026, 1188
MslI	CAYNNNNRTG	2 cut(s)	290, 1109
Msp20I	TGGCCA	1 cut(s)	75
MspI	CCGG	3 cut(s)	474, 482, 616
MspR9I	CCNGG	1 cut(s)	1205
MunI	CAATTG	2 cut(s)	885, 901
MvaI	CCWGG	1 cut(s)	1205
MvnI	CGCG	1 cut(s)	624
MwoI	GCNNNNNNNGC	6 cut(s)	544, 621, 1106, 1115, 1124, 1371
NdeII	GATC	3 cut(s)	313, 381, 1081
NlaIII	CATG	3 cut(s)	102, 670, 1290
NlaIV	GGNNCC	3 cut(s)	383, 703, 759
NmeAIII	GCCGAG	1 cut(s)	595
NmuCI	GTSAC	3 cut(s)	4, 270, 347
NruI	TCGCGA	1 cut(s)	624
NsiI	ATGCAT	1 cut(s)	1292
OliI	CACNNNNGTG	1 cut(s)	290
PaeR7I	CTCGAG	1 cut(s)	803
PasI	CCCWGGG	1 cut(s)	1204
PciSI	GCTCTTC	2 cut(s)	528, 970
PdmI	GAANNNNTTC	2 cut(s)	896, 1067
PfeI	GAWTC	5 cut(s)	151, 244, 619, 892, 954
PflMI	CCANNNNNTGG	1 cut(s)	239
PkrI	GCNGC	3 cut(s)	171, 280, 862
PleI	GAGTC	2 cut(s)	106, 1257
PpsI	GAGTC	2 cut(s)	106, 1257
Psp124BI	GAGCTC	1 cut(s)	540
Psp6I	CCWGG	1 cut(s)	1203
PspGI	CCWGG	1 cut(s)	1203
PspN4I	GGNNCC	3 cut(s)	383, 703, 759
PspPI	GGNCC	1 cut(s)	670
PsuI	RGATCY	2 cut(s)	313, 381
RruI	TCGCGA	1 cut(s)	624
RsaI	GTAC	2 cut(s)	717, 874
RsaNI	GTAC	2 cut(s)	716, 873
RseI	CAYNNNNRTG	2 cut(s)	290, 1109
SacI	GAGCTC	1 cut(s)	540
SalI	GTCGAC	2 cut(s)	596, 788
SapI	GCTCTTC	2 cut(s)	528, 970
SaqAI	TTAA	3 cut(s)	920, 1026, 1188
SatI	GCNGC	3 cut(s)	170, 279, 861
Sau3AI	GATC	3 cut(s)	313, 381, 1081
Sau96I	GGNCC	1 cut(s)	670
ScaI	AGTACT	2 cut(s)	717, 874
SchI	GAGTC	2 cut(s)	106, 1258
ScrFI	CCNGG	1 cut(s)	1205
SduI	GDGCHC	5 cut(s)	297, 360, 540, 762, 1234
SfaNI	GCATC	2 cut(s)	616, 1299
SfcI	CTRYAG	1 cut(s)	868
Sfr274I	CTCGAG	1 cut(s)	803
SinI	GGWCC	1 cut(s)	670
SlaI	CTCGAG	1 cut(s)	803
SmiMI	CAYNNNNRTG	2 cut(s)	290, 1109
SmlI	CTYRAG	3 cut(s)	765, 803, 1360
SmoI	CTYRAG	3 cut(s)	765, 803, 1360
SsiI	CCGC	6 cut(s)	41, 167, 276, 762, 861, 1178
SspI	AATATT	1 cut(s)	238
SspMI	CTAG	1 cut(s)	362
SstI	GAGCTC	1 cut(s)	540
StyD4I	CCNGG	1 cut(s)	1203
StyI	CCWWGG	2 cut(s)	660, 753
TaaI	ACNGT	4 cut(s)	123, 353, 733, 1282
TaiI	ACGT	2 cut(s)	651, 1017
TaqI	TCGA	4 cut(s)	597, 720, 789, 804
TatI	WGTACW	2 cut(s)	715, 872
TauI	GCSGC	1 cut(s)	863
TfiI	GAWTC	5 cut(s)	151, 244, 619, 892, 954
Tru1I	TTAA	3 cut(s)	920, 1026, 1188
Tru9I	TTAA	3 cut(s)	920, 1026, 1188
TscAI	CASTG	3 cut(s)	348, 714, 1415
TseFI	GTSAC	3 cut(s)	4, 270, 347
TseI	GCWGC	2 cut(s)	169, 278
Tsp45I	GTSAC	3 cut(s)	4, 270, 347
TspDTI	ATGAA	4 cut(s)	143, 236, 1127, 1226
TspGWI	ACGGA	1 cut(s)	553
TspRI	CASTG	3 cut(s)	348, 714, 1415
Van91I	CCANNNNNTGG	1 cut(s)	239
VpaK11BI	GGWCC	1 cut(s)	670
XagI	CCTNNNNNAGG	1 cut(s)	437
XhoI	CTCGAG	1 cut(s)	803
XmiI	GTMKAC	2 cut(s)	597, 789
XmnI	GAANNNNTTC	2 cut(s)	896, 1067
XspI	CTAG	1 cut(s)	362
ZrmI	AGTACT	2 cut(s)	717, 874
Zsp2I	ATGCAT	1 cut(s)	1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.