Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010050.1

Orthogroup ID

OG0001538

Physical Location & Seq

Genomic Coordinates Forward (+)

21093 .. 24895

Gene Structure 3803 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010050.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

atgattggaaaactgactgttgatgttgataaagaagactatgataaggatgttgacgatgatgatgtggacaacgcagaggattctgagggcgaagagtttgagcaggaaaccggtcatacacacgtggatttgacattgaggcttcgtctgtcaaatttgacagccccaactctggctccggccagtacttcgtcgaccttctcctcggcaatcctcctcgtcgcagacatcgggtcccattatctggtatcagagctccaaaccatggggccgaggagagctggagatccaccacaatattcatcaacaccgccgcgtccacctaacctaggtaatttgcggatgaagcttcaagtcgagttaaaggagacagcggcgggacttcgtgaacttcacaaatctatggccaaaacggcgacggagcaggctatattccagtccgagatattaaacgaattgaggcaatttcggttggagcgaacagctcagttgaggcctccaccaccaccaccaccacagtatccaccaacttcgctgcctccgtttcctgcttcgaaccctacaccgttggcacagttcaccgccagcccacctcctctgttggacggcgctcctccgcctattcgccctcccaaaatccatagctcgcgactccaaatccacactccactgctagaacagcccaccaccaagcctcctcctctgctcgatgctcagcctaacaacaaccttgcatccttttgctccaagagggagagtgtcgagaagacggttgaggtgcatagtggagttggtagagagttcaatgagcttgagagtgtcagtgctaagcaggacgatggtggtttcgttgaggataaggagcaggtagacttcacaattcctttaatatataaagctttaaatacaggaacaggaaatgatgaaattgtgaatgccaaagttgaagttgaagtagtggaaactctttctgaacattctgatgagaaatttaaatctgctactactgacattttgatgaaattttgttgcttgcacaaacgtgatcaactttataagcttagcagtggaatatcagaatttgatgccctccaattgttcggtaaaagcttgcaattagagggattagttagtgatagaaggataggagatgctaagtttaagtggctacttgaatcatttatagtacctactgttgacaagacttcaacggattattttcttgaggcattccattatgtaccatacagttataaaaattggcgtgcaatactcatttggttcttggcagctataatccaatgtagtcttaaccccactgtgtttattcacaatatcttactgggtgatataaatggaagagtgagtttgcattttgttagtaagatggagacaaaagcaaacattgttgagaagatgtttgatggaaattggaagtggaaatctcaaatcacttttggaacttcagtaggtgtgatttgtgtcaaagagtttaatgtggatttctttggattttatatggtgttagataagaagtgtttggaaaagacaatttgtaatctgcacttttgcatgtcatctttgaatttaaagttactgcaagttccagttcatttaagtagcagaggctttggctttacacatgagtggcatcttggaaacttagtttggaatatagcaggaaatacgcagaagctatttgttgctatgcatggcagagagaatggaaccagattttcaatccttcaccattggttccccatttcttcgaatgatgcgcagagacaagcaaccaaaagttctggcagaattgaagctcttgtcattgatcaggaaaacaattttcagcgaggtgattcttatcttgacatggttactggtcttttcaaaaatgatttcagcttatcttcttccaggaataaggagggcctcatattagatttaggtcttagttgtggaacaattgatatatcttatttaaagatatttaatggtgtttttgaggtgacggcagtaagctttgagtcatttggaggagagaattctaaccatgcttggctgaacttcatagtgagtgaattcactataattaaattcaccgttagcttactttacttgagacctgcttggtgcctgtctaagcttgtaatttctggtagtggtactttctatcatggatacaaggaacacaagcgattcaaatgtctcaacaatatcaagatatcacttctagtggggttatttggatcaggtgacacccaagaagcatttcaggttcttcacaccattctgactgcatttcttattgctgattactgccatgcaaggtcgcccaatgcttttgaagctacctctaaatggcaattaaatagtttgggatcgggtgaacaatttctacatgttgatgattatgtccttgctattctcataaaagaaagactctgttgtacctcatggttcaatacctatattaatacactaccaagtgaacctcacactgggacaaattatggagttataaaagtgatgggcgtgaaggaagccatgctgttgggtaaggtgccaatcaaatactctggtattgtgacctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko05152 map03018 map04212 map05152

Pfam Domains

Protein Families

HSP70

Protein Analysis

864

Amino Acids

96.71

Weight (kDa)

5.98

Isoelectric Point (pI)

40.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001538)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g15102 FvH4_1g18481 FvH4_1g23805 FvH4_1g23806 FvH4_1g24581 FvH4_2g20031 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g22840 FvH4_3g23161 FvH4_3g29863 FvH4_3g30141 FvH4_3g31747 FvH4_4g00983 FvH4_4g08481 FvH4_4g08541 FvH4_4g14020 FvH4_4g35090 FvH4_4g35091 FvH4_6g33521 FvH4_6g37662 FvH4_6g39361 FvH4_6g39362 FvH4_7g11680 FvH4_7g14385 FvH4_7g27352 FvH4_7g27353 FvH4_7g28392
pyrus_communis	pycom07g27700
rosa_chinensis	RchiOBHm_Chr3g0481561 RchiOBHm_Chr5g0002281
rosa_laevigata	RLG00000010224 RLG00000028985
rosa_multiflora	Rmu_co8150836.1_g000001 Rmu_sc0001141.1_g000014 Rmu_sc0003002.1_g000038 Rmu_sc0010050.1_g000004 Rmu_sc0033439.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130360 Rroxscaffold_3G00239170 Rroxscaffold_3G00245770 Rroxscaffold_4G00314270 Rroxscaffold_5G00333350 Rroxscaffold_5G00382830
rosa_samantha	Rh1BG051600 Rh7BG317500 Rh7BG317600 Rh7CG294600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1059, 1257, 2522
Acc16I	TGCGCA	1 cut(s)	1782
Acc36I	ACCTGC	2 cut(s)	859, 2134
AccB1I	GGYRCC	2 cut(s)	2133, 2563
AccB7I	CCANNNNNTGG	2 cut(s)	247, 268
AccI	GTMKAC	2 cut(s)	197, 873
AccII	CGCG	2 cut(s)	319, 652
AciI	CCGC	7 cut(s)	314, 317, 343, 377, 380, 585, 620
AclWI	GGATC	3 cut(s)	284, 2257, 2389
AcoI	YGGCCR	2 cut(s)	183, 408
AcsI	RAATTY	8 cut(s)	157, 992, 1025, 1082, 1588, 2044, 2081, 2096
AcuI	CTGAAG	1 cut(s)	1452
AcvI	CACGTG	1 cut(s)	127
AfaI	GTAC	5 cut(s)	190, 1191, 1245, 2167, 2452
AfiI	CCNNNNNNNGG	6 cut(s)	175, 247, 268, 332, 2361, 2501
AflIII	ACRYGT	2 cut(s)	124, 2401
AgeI	ACCGGT	1 cut(s)	113
AhdI	GACNNNNNGTC	1 cut(s)	235
AjnI	CCWGG	1 cut(s)	1916
AjuI	GAANNNNNNNTTGG	4 cut(s)	1654, 1686, 2256, 2288
AleI	CACNNNNGTG	2 cut(s)	1044, 1648
Alw21I	GWGCWC	1 cut(s)	261
Alw26I	GTCTC	5 cut(s)	365, 1388, 1780, 2116, 2213
AlwI	GGATC	3 cut(s)	284, 2257, 2389
AoxI	GGCC	5 cut(s)	183, 272, 408, 497, 1930
ApeKI	GCWGC	2 cut(s)	538, 1292
ApoI	RAATTY	8 cut(s)	157, 992, 1025, 1082, 1588, 2044, 2081, 2096
AseI	ATTAAT	1 cut(s)	2475
AsiGI	ACCGGT	1 cut(s)	113
Asp700I	GAANNNNTTC	2 cut(s)	2271, 2394
AspA2I	CCTAGG	1 cut(s)	331
AspLEI	GCGC	2 cut(s)	614, 1783
AspS9I	GGNCC	3 cut(s)	237, 272, 1930
AsuHPI	GGTGA	8 cut(s)	574, 1361, 1742, 1868, 2020, 2092, 2267, 2399
AsuII	TTCGAA	2 cut(s)	557, 1772
AvaII	GGWCC	1 cut(s)	237
AvrII	CCTAGG	1 cut(s)	331
BaeI	ACNNNNGTAYC	2 cut(s)	506, 539
BalI	TGGCCA	1 cut(s)	410
BanI	GGYRCC	2 cut(s)	2133, 2563
BanII	GRGCYC	1 cut(s)	261
BbrPI	CACGTG	1 cut(s)	127
BbsI	GAAGAC	2 cut(s)	42, 776
Bbv12I	GWGCWC	1 cut(s)	261
BbvI	GCAGC	2 cut(s)	525, 1304
BccI	CCATC	4 cut(s)	836, 1384, 1421, 2524
BceAI	ACGGC	3 cut(s)	432, 625, 2028
BciT130I	CCWGG	1 cut(s)	1918
BciVI	GTATCC	2 cut(s)	534, 2174
BclI	TGATCA	2 cut(s)	1048, 1831
BcoDI	GTCTC	5 cut(s)	365, 1388, 1780, 2116, 2213
BfaI	CTAG	3 cut(s)	332, 677, 2234
BfoI	RGCGCY	1 cut(s)	615
BfuAI	ACCTGC	2 cut(s)	859, 2134
BfuI	GTATCC	2 cut(s)	534, 2174
BglI	GCCNNNNNGGC	1 cut(s)	416
BisI	GCNGC	4 cut(s)	317, 378, 539, 1293
BlnI	CCTAGG	1 cut(s)	331
BlpI	GCTNAGC	3 cut(s)	717, 831, 1064
BlsI	GCNGC	4 cut(s)	318, 379, 540, 1294
BmcAI	AGTACT	1 cut(s)	190
Bme1390I	CCNGG	1 cut(s)	1918
Bme18I	GGWCC	1 cut(s)	237
BmeRI	GACNNNNNGTC	1 cut(s)	235
BmgT120I	GGNCC	3 cut(s)	237, 272, 1930
BmiI	GGNNCC	8 cut(s)	180, 238, 239, 273, 1732, 1760, 2135, 2565
BmrFI	CCNGG	1 cut(s)	1918
BmrI	ACTGGG	2 cut(s)	1355, 2511
BmsI	GCATC	6 cut(s)	703, 746, 1078, 1144, 1663, 1768
BmuI	ACTGGG	2 cut(s)	1355, 2511
BpiI	GAAGAC	2 cut(s)	42, 776
BpmI	CTGGAG	1 cut(s)	306
Bpu1102I	GCTNAGC	3 cut(s)	717, 831, 1064
Bpu14I	TTCGAA	2 cut(s)	557, 1772
BpuEI	CTTGAG	3 cut(s)	836, 1247, 2140
BsaAI	YACGTR	1 cut(s)	127
BsaBI	GATNNNNATC	1 cut(s)	1863
BsaI	GGTCTC	1 cut(s)	2116
BsaJI	CCNNGG	4 cut(s)	207, 267, 275, 331
BsaWI	WCCGGW	1 cut(s)	113
BsaXI	ACNNNNNCTCC	4 cut(s)	163, 193, 682, 712
Bsc4I	CCNNNNNNNGG	6 cut(s)	175, 247, 268, 332, 2361, 2501
Bse118I	RCCGGY	1 cut(s)	113
Bse1I	ACTGG	6 cut(s)	186, 439, 1350, 1610, 1885, 2506
Bse8I	GATNNNNATC	1 cut(s)	1863
BseBI	CCWGG	1 cut(s)	1918
BseDI	CCNNGG	4 cut(s)	207, 267, 275, 331
BseGI	GGATG	3 cut(s)	55, 351, 737
BseJI	GATNNNNATC	1 cut(s)	1863
BseLI	CCNNNNNNNGG	6 cut(s)	175, 247, 268, 332, 2361, 2501
BseMII	CTCAG	3 cut(s)	78, 503, 731
BseNI	ACTGG	6 cut(s)	186, 439, 1350, 1610, 1885, 2506
BseRI	GAGGAG	8 cut(s)	196, 209, 292, 588, 606, 690, 693, 2052
BseXI	GCAGC	2 cut(s)	525, 1304
BsgI	GTGCAG	1 cut(s)	1550
Bsh1236I	CGCG	2 cut(s)	319, 652
BshFI	GGCC	5 cut(s)	185, 274, 410, 499, 1932
BshNI	GGYRCC	2 cut(s)	2133, 2563
BshTI	ACCGGT	1 cut(s)	113
BsiHKAI	GWGCWC	1 cut(s)	261
BsiSI	CCGG	2 cut(s)	114, 182
BslFI	GGGAC	3 cut(s)	223, 396, 2518
BslI	CCNNNNNNNGG	6 cut(s)	175, 247, 268, 332, 2361, 2501
BsmAI	GTCTC	5 cut(s)	365, 1388, 1780, 2116, 2213
BsmFI	GGGAC	3 cut(s)	223, 396, 2518
BsmI	GAATGC	2 cut(s)	943, 1232
BsnI	GGCC	5 cut(s)	185, 274, 410, 499, 1932
Bso31I	GGTCTC	1 cut(s)	2116
Bsp119I	TTCGAA	2 cut(s)	557, 1772
Bsp1286I	GDGCHC	1 cut(s)	261
Bsp143I	GATC	5 cut(s)	289, 1048, 1831, 2249, 2381
Bsp1720I	GCTNAGC	3 cut(s)	717, 831, 1064
Bsp19I	CCATGG	1 cut(s)	267
Bsp68I	TCGCGA	1 cut(s)	652
BspACI	CCGC	7 cut(s)	314, 317, 343, 377, 380, 585, 620
BspANI	GGCC	5 cut(s)	185, 274, 410, 499, 1932
BspCNI	CTCAG	3 cut(s)	79, 502, 730
BspFNI	CGCG	2 cut(s)	319, 652
BspLI	GGNNCC	8 cut(s)	180, 238, 239, 273, 1732, 1760, 2135, 2565
BspMI	ACCTGC	2 cut(s)	859, 2134
BspPI	GGATC	3 cut(s)	284, 2257, 2389
BspT104I	TTCGAA	2 cut(s)	557, 1772
BspT107I	GGYRCC	2 cut(s)	2133, 2563
BspTNI	GGTCTC	1 cut(s)	2116
BsrFI	RCCGGY	1 cut(s)	113
BsrI	ACTGG	6 cut(s)	186, 439, 1350, 1610, 1885, 2506
BssAI	RCCGGY	1 cut(s)	113
BssECI	CCNNGG	4 cut(s)	207, 267, 275, 331
BssMI	GATC	5 cut(s)	289, 1048, 1831, 2249, 2381
BssT1I	CCWWGG	2 cut(s)	267, 331
Bst2UI	CCWGG	1 cut(s)	1918
Bst4CI	ACNGT	9 cut(s)	19, 522, 570, 579, 775, 1198, 1253, 1324, 2104
Bst6I	CTCTTC	2 cut(s)	90, 1357
BstBAI	YACGTR	1 cut(s)	127
BstBI	TTCGAA	2 cut(s)	557, 1772
BstC8I	GCNNGC	6 cut(s)	429, 589, 650, 1037, 1115, 1269
BstDEI	CTNAG	9 cut(s)	87, 489, 717, 831, 1064, 1158, 1666, 1952, 2142
BstDSI	CCRYGG	1 cut(s)	267
BstENI	CCTNNNNNAGG	1 cut(s)	330
BstF5I	GGATG	3 cut(s)	55, 351, 737
BstFNI	CGCG	2 cut(s)	319, 652
BstH2I	RGCGCY	1 cut(s)	615
BstHHI	GCGC	2 cut(s)	614, 1783
BstKTI	GATC	5 cut(s)	292, 1051, 1834, 2252, 2384
BstMAI	GTCTC	5 cut(s)	365, 1388, 1780, 2116, 2213
BstMBI	GATC	5 cut(s)	289, 1048, 1831, 2249, 2381
BstMWI	GCNNNNNNNGC	4 cut(s)	349, 416, 682, 2348
BstNI	CCWGG	1 cut(s)	1918
BstNSI	RCATGY	2 cut(s)	1579, 2405
BstSCI	CCNGG	1 cut(s)	1916
BstUI	CGCG	2 cut(s)	319, 652
BstV1I	GCAGC	2 cut(s)	525, 1304
BstV2I	GAAGAC	2 cut(s)	42, 776
BstX2I	RGATCY	1 cut(s)	289
BstXI	CCANNNNNNTGG	1 cut(s)	2554
BstYI	RGATCY	1 cut(s)	289
BsuI	GTATCC	2 cut(s)	534, 2174
BsuRI	GGCC	5 cut(s)	185, 274, 410, 499, 1932
BtgI	CCRYGG	1 cut(s)	267
BtsCI	GGATG	3 cut(s)	55, 351, 737
BtsI	GCAGTG	2 cut(s)	671, 1075
BtsIMutI	CAGTG	5 cut(s)	671, 832, 1075, 1320, 2499
BtuMI	TCGCGA	1 cut(s)	652
BveI	ACCTGC	2 cut(s)	859, 2134
Cac8I	GCNNGC	6 cut(s)	429, 589, 650, 1037, 1115, 1269
CfoI	GCGC	2 cut(s)	614, 1783
Cfr10I	RCCGGY	1 cut(s)	113
Cfr13I	GGNCC	3 cut(s)	237, 272, 1930
CseI	GACGC	1 cut(s)	308
Csp6I	GTAC	5 cut(s)	189, 1190, 1244, 2166, 2451
CspAI	ACCGGT	1 cut(s)	113
CviQI	GTAC	5 cut(s)	189, 1190, 1244, 2166, 2451
DdeI	CTNAG	9 cut(s)	87, 489, 717, 831, 1064, 1158, 1666, 1952, 2142
DpnI	GATC	5 cut(s)	291, 1050, 1833, 2251, 2383
DpnII	GATC	5 cut(s)	289, 1048, 1831, 2249, 2381
DraI	TTTAAA	4 cut(s)	906, 997, 1593, 1983
DriI	GACNNNNNGTC	1 cut(s)	235
EaeI	YGGCCR	2 cut(s)	183, 408
Eam1104I	CTCTTC	2 cut(s)	90, 1357
Eam1105I	GACNNNNNGTC	1 cut(s)	235
EarI	CTCTTC	2 cut(s)	90, 1357
EciI	GGCGGA	1 cut(s)	609
Ecl136II	GAGCTC	1 cut(s)	259
Eco130I	CCWWGG	2 cut(s)	267, 331
Eco147I	AGGCCT	1 cut(s)	499
Eco24I	GRGCYC	1 cut(s)	261
Eco31I	GGTCTC	1 cut(s)	2116
Eco32I	GATATC	1 cut(s)	2226
Eco47I	GGWCC	1 cut(s)	237
Eco53kI	GAGCTC	1 cut(s)	259
Eco57I	CTGAAG	1 cut(s)	1452
Eco72I	CACGTG	1 cut(s)	127
EcoICRI	GAGCTC	1 cut(s)	259
EcoNI	CCTNNNNNAGG	1 cut(s)	330
EcoO109I	RGGNCCY	2 cut(s)	237, 1930
EcoRI	GAATTC	2 cut(s)	2044, 2081
EcoRII	CCWGG	1 cut(s)	1916
EcoRV	GATATC	1 cut(s)	2226
EcoT14I	CCWWGG	2 cut(s)	267, 331
EcoT22I	ATGCAT	1 cut(s)	1716
EcoT38I	GRGCYC	1 cut(s)	261
ErhI	CCWWGG	2 cut(s)	267, 331
FaqI	GGGAC	3 cut(s)	223, 396, 2518
FauI	CCCGC	1 cut(s)	373
FbaI	TGATCA	2 cut(s)	1048, 1831
FblI	GTMKAC	2 cut(s)	197, 873
Fnu4HI	GCNGC	4 cut(s)	317, 378, 539, 1293
FokI	GGATG	3 cut(s)	62, 358, 724
FriOI	GRGCYC	1 cut(s)	261
Fsp4HI	GCNGC	4 cut(s)	317, 378, 539, 1293
FspBI	CTAG	3 cut(s)	332, 677, 2234
FspI	TGCGCA	1 cut(s)	1782
GlaI	GCGC	2 cut(s)	613, 1782
GluI	GCNGC	4 cut(s)	317, 378, 539, 1293
GsuI	CTGGAG	1 cut(s)	306
HaeII	RGCGCY	1 cut(s)	615
HaeIII	GGCC	5 cut(s)	185, 274, 410, 499, 1932
HapII	CCGG	2 cut(s)	114, 182
HgaI	GACGC	1 cut(s)	308
HhaI	GCGC	2 cut(s)	614, 1783
Hin6I	GCGC	2 cut(s)	612, 1781
HinP1I	GCGC	2 cut(s)	612, 1781
HincII	GTYRAC	3 cut(s)	55, 198, 1201
HindII	GTYRAC	3 cut(s)	55, 198, 1201
HindIII	AAGCTT	6 cut(s)	350, 900, 1061, 1111, 2020, 2144
HinfI	GANTC	7 cut(s)	83, 654, 1178, 1859, 2027, 2199, 2442
HpaII	CCGG	2 cut(s)	114, 182
HphI	GGTGA	8 cut(s)	574, 1361, 1742, 1868, 2020, 2092, 2267, 2399
Hpy188I	TCNGA	7 cut(s)	88, 256, 445, 976, 985, 1081, 2295
Hpy188III	TCNNGA	7 cut(s)	389, 651, 766, 1226, 1835, 1868, 2221
Hpy99I	CGWCG	3 cut(s)	199, 227, 424
HpyAV	CCTTC	4 cut(s)	211, 1137, 1757, 2533
HpyCH4III	ACNGT	9 cut(s)	19, 522, 570, 579, 775, 1198, 1253, 1324, 2104
HpyCH4IV	ACGT	2 cut(s)	126, 1045
HpyF10VI	GCNNNNNNNGC	4 cut(s)	349, 416, 682, 2348
HpyF3I	CTNAG	9 cut(s)	87, 489, 717, 831, 1064, 1158, 1666, 1952, 2142
HpySE526I	ACGT	2 cut(s)	126, 1045
HspAI	GCGC	2 cut(s)	612, 1781
KflI	GGGWCCC	1 cut(s)	237
Ksp22I	TGATCA	2 cut(s)	1048, 1831
Kzo9I	GATC	5 cut(s)	289, 1048, 1831, 2249, 2381
LmnI	GCTCC	7 cut(s)	184, 264, 424, 478, 619, 752, 865
Lsp1109I	GCAGC	2 cut(s)	525, 1304
LweI	GCATC	6 cut(s)	703, 746, 1078, 1144, 1663, 1768
MaeI	CTAG	3 cut(s)	332, 677, 2234
MaeII	ACGT	2 cut(s)	126, 1045
MaeIII	GTNAC	5 cut(s)	1596, 1876, 2008, 2255, 2587
MalI	GATC	5 cut(s)	291, 1050, 1833, 2251, 2383
MboI	GATC	5 cut(s)	289, 1048, 1831, 2249, 2381
MboII	GAAGA	9 cut(s)	47, 107, 781, 1374, 1429, 1761, 1902, 1905, 2273
MfeI	CAATTG	2 cut(s)	1097, 1965
MflI	RGATCY	1 cut(s)	289
MhlI	GDGCHC	1 cut(s)	261
MlsI	TGGCCA	1 cut(s)	410
MluNI	TGGCCA	1 cut(s)	410
MlyI	GAGTC	3 cut(s)	648, 2036, 2436
MmeI	TCCRAC	2 cut(s)	456, 585
Mox20I	TGGCCA	1 cut(s)	410
Mph1103I	ATGCAT	1 cut(s)	1716
MroXI	GAANNNNTTC	2 cut(s)	2271, 2394
MscI	TGGCCA	1 cut(s)	410
MslI	CAYNNNNRTG	5 cut(s)	984, 1019, 1044, 1648, 2406
Msp20I	TGGCCA	1 cut(s)	410
MspA1I	CMGCKG	1 cut(s)	377
MspI	CCGG	2 cut(s)	114, 182
MspR9I	CCNGG	1 cut(s)	1918
MunI	CAATTG	2 cut(s)	1097, 1965
Mva1269I	GAATGC	2 cut(s)	943, 1232
MvaI	CCWGG	1 cut(s)	1918
MvnI	CGCG	2 cut(s)	319, 652
MwoI	GCNNNNNNNGC	4 cut(s)	349, 416, 682, 2348
NcoI	CCATGG	1 cut(s)	267
NdeII	GATC	5 cut(s)	289, 1048, 1831, 2249, 2381
NlaIV	GGNNCC	8 cut(s)	180, 238, 239, 273, 1732, 1760, 2135, 2565
NmeAIII	GCCGAG	2 cut(s)	188, 300
NmuCI	GTSAC	3 cut(s)	2008, 2255, 2587
NruI	TCGCGA	1 cut(s)	652
NsbI	TGCGCA	1 cut(s)	1782
NsiI	ATGCAT	1 cut(s)	1716
NspI	RCATGY	2 cut(s)	1579, 2405
NspV	TTCGAA	2 cut(s)	557, 1772
OliI	CACNNNNGTG	2 cut(s)	1044, 1648
PceI	AGGCCT	1 cut(s)	499
PciI	ACATGT	1 cut(s)	2401
PcsI	WCGNNNNNNNCGW	2 cut(s)	478, 542
PctI	GAATGC	2 cut(s)	943, 1232
PdmI	GAANNNNTTC	2 cut(s)	2271, 2394
PfeI	GAWTC	4 cut(s)	83, 1178, 1859, 2199
PflMI	CCANNNNNTGG	2 cut(s)	247, 268
PfoI	TCCNGGA	1 cut(s)	1916
PinAI	ACCGGT	1 cut(s)	113
PkrI	GCNGC	4 cut(s)	318, 379, 540, 1294
PleI	GAGTC	3 cut(s)	648, 2035, 2436
PmaCI	CACGTG	1 cut(s)	127
PmlI	CACGTG	1 cut(s)	127
PpsI	GAGTC	3 cut(s)	648, 2035, 2436
Ppu21I	YACGTR	1 cut(s)	127
PpuMI	RGGWCCY	1 cut(s)	237
PscI	ACATGT	1 cut(s)	2401
PshBI	ATTAAT	1 cut(s)	2475
PsiI	TTATAA	3 cut(s)	1059, 1257, 2522
Psp124BI	GAGCTC	1 cut(s)	261
Psp5II	RGGWCCY	1 cut(s)	237
Psp6I	CCWGG	1 cut(s)	1916
PspCI	CACGTG	1 cut(s)	127
PspGI	CCWGG	1 cut(s)	1916
PspN4I	GGNNCC	8 cut(s)	180, 238, 239, 273, 1732, 1760, 2135, 2565
PspPI	GGNCC	3 cut(s)	237, 272, 1930
PspPPI	RGGWCCY	1 cut(s)	237
PsrI	GAACNNNNNNTAC	2 cut(s)	2382, 2414
PsuI	RGATCY	1 cut(s)	289
RruI	TCGCGA	1 cut(s)	652
RsaI	GTAC	5 cut(s)	190, 1191, 1245, 2167, 2452
RsaNI	GTAC	5 cut(s)	189, 1190, 1244, 2166, 2451
RseI	CAYNNNNRTG	5 cut(s)	984, 1019, 1044, 1648, 2406
SacI	GAGCTC	1 cut(s)	261
SalI	GTCGAC	1 cut(s)	196
SatI	GCNGC	4 cut(s)	317, 378, 539, 1293
Sau3AI	GATC	5 cut(s)	289, 1048, 1831, 2249, 2381
Sau96I	GGNCC	3 cut(s)	237, 272, 1930
ScaI	AGTACT	1 cut(s)	190
SchI	GAGTC	3 cut(s)	648, 2036, 2436
ScrFI	CCNGG	1 cut(s)	1918
SduI	GDGCHC	1 cut(s)	261
SfaNI	GCATC	6 cut(s)	703, 746, 1078, 1144, 1663, 1768
SfuI	TTCGAA	2 cut(s)	557, 1772
SinI	GGWCC	1 cut(s)	237
SmiI	ATTTAAAT	1 cut(s)	997
SmiMI	CAYNNNNRTG	5 cut(s)	984, 1019, 1044, 1648, 2406
SmlI	CTYRAG	3 cut(s)	815, 1226, 2119
SmoI	CTYRAG	3 cut(s)	815, 1226, 2119
SseBI	AGGCCT	1 cut(s)	499
SsiI	CCGC	7 cut(s)	314, 317, 343, 377, 380, 585, 620
SspI	AATATT	1 cut(s)	302
SspMI	CTAG	3 cut(s)	332, 677, 2234
SstI	GAGCTC	1 cut(s)	261
StuI	AGGCCT	1 cut(s)	499
StyD4I	CCNGG	1 cut(s)	1916
StyI	CCWWGG	2 cut(s)	267, 331
SwaI	ATTTAAAT	1 cut(s)	997
TaaI	ACNGT	9 cut(s)	19, 522, 570, 579, 775, 1198, 1253, 1324, 2104
TaiI	ACGT	2 cut(s)	129, 1048
TaqI	TCGA	6 cut(s)	197, 360, 557, 711, 765, 1772
TatI	WGTACW	1 cut(s)	188
TauI	GCSGC	2 cut(s)	319, 380
TfiI	GAWTC	4 cut(s)	83, 1178, 1859, 2199
TscAI	CASTG	5 cut(s)	678, 832, 1075, 1327, 2506
TseFI	GTSAC	3 cut(s)	2008, 2255, 2587
TseI	GCWGC	2 cut(s)	538, 1292
Tsp45I	GTSAC	3 cut(s)	2008, 2255, 2587
TspDTI	ATGAA	6 cut(s)	294, 362, 942, 1037, 1604, 2059
TspGWI	ACGGA	3 cut(s)	437, 534, 1229
TspRI	CASTG	5 cut(s)	678, 832, 1075, 1327, 2506
Van91I	CCANNNNNTGG	2 cut(s)	247, 268
VpaK11BI	GGWCC	1 cut(s)	237
VspI	ATTAAT	1 cut(s)	2475
XagI	CCTNNNNNAGG	1 cut(s)	330
XapI	RAATTY	8 cut(s)	157, 992, 1025, 1082, 1588, 2044, 2081, 2096
XceI	RCATGY	2 cut(s)	1579, 2405
XmaJI	CCTAGG	1 cut(s)	331
XmiI	GTMKAC	2 cut(s)	197, 873
XmnI	GAANNNNTTC	2 cut(s)	2271, 2394
XspI	CTAG	3 cut(s)	332, 677, 2234
ZrmI	AGTACT	1 cut(s)	190
Zsp2I	ATGCAT	1 cut(s)	1716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.