RAN GTPase-activating protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2780 |
| AarI | CACCTGC | 1 cut(s) | 810 |
| Acc16I | TGCGCA | 1 cut(s) | 2936 |
| Acc36I | ACCTGC | 2 cut(s) | 810, 2103 |
| AccB1I | GGYRCC | 1 cut(s) | 2126 |
| AccBSI | CCGCTC | 1 cut(s) | 37 |
| AccI | GTMKAC | 2 cut(s) | 1167, 2209 |
| AccIII | TCCGGA | 1 cut(s) | 588 |
| AciI | CCGC | 5 cut(s) | 35, 176, 432, 524, 3249 |
| AclI | AACGTT | 1 cut(s) | 1828 |
| AclWI | GGATC | 2 cut(s) | 185, 1606 |
| AcuI | CTGAAG | 3 cut(s) | 954, 1101, 1764 |
| AdeI | CACNNNGTG | 1 cut(s) | 719 |
| AfaI | GTAC | 7 cut(s) | 83, 1031, 1418, 1800, 2520, 3145, 3338 |
| AfeI | AGCGCT | 1 cut(s) | 115 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 38, 767 |
| AflII | CTTAAG | 1 cut(s) | 2131 |
| AflIII | ACRYGT | 2 cut(s) | 1074, 2326 |
| AhlI | ACTAGT | 2 cut(s) | 2767, 2921 |
| AjiI | CACGTC | 2 cut(s) | 1077, 1752 |
| AjnI | CCWGG | 3 cut(s) | 90, 533, 1144 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 385, 417 |
| Alw21I | GWGCWC | 1 cut(s) | 90 |
| Alw26I | GTCTC | 7 cut(s) | 205, 870, 1202, 1700, 2233, 2383, 2424 |
| AlwI | GGATC | 2 cut(s) | 185, 1606 |
| Ama87I | CYCGRG | 1 cut(s) | 38 |
| Aor13HI | TCCGGA | 1 cut(s) | 588 |
| Aor51HI | AGCGCT | 1 cut(s) | 115 |
| AoxI | GGCC | 1 cut(s) | 2099 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 268, 300, 2754, 2786, 3182, 3214 |
| AseI | ATTAAT | 1 cut(s) | 1626 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1389 |
| AspLEI | GCGC | 5 cut(s) | 97, 116, 382, 2547, 2937 |
| AspS9I | GGNCC | 2 cut(s) | 501, 758 |
| AsuC2I | CCSGG | 1 cut(s) | 377 |
| AsuHPI | GGTGA | 9 cut(s) | 150, 322, 890, 1126, 1309, 1523, 2915, 2939, 3317 |
| AsuNHI | GCTAGC | 1 cut(s) | 2756 |
| AvaI | CYCGRG | 1 cut(s) | 38 |
| AvaII | GGWCC | 2 cut(s) | 501, 758 |
| AxyI | CCTNAGG | 1 cut(s) | 1279 |
| BanI | GGYRCC | 1 cut(s) | 2126 |
| BanII | GRGCYC | 2 cut(s) | 90, 2289 |
| Bbv12I | GWGCWC | 1 cut(s) | 90 |
| BciT130I | CCWGG | 3 cut(s) | 92, 535, 1146 |
| BciVI | GTATCC | 1 cut(s) | 2068 |
| BclI | TGATCA | 3 cut(s) | 1369, 1513, 3324 |
| BcnI | CCSGG | 1 cut(s) | 377 |
| BcoDI | GTCTC | 7 cut(s) | 205, 870, 1202, 1700, 2233, 2383, 2424 |
| BcuI | ACTAGT | 2 cut(s) | 2767, 2921 |
| BfmI | CTRYAG | 1 cut(s) | 2403 |
| BfoI | RGCGCY | 1 cut(s) | 117 |
| BfrI | CTTAAG | 1 cut(s) | 2131 |
| BfuAI | ACCTGC | 2 cut(s) | 810, 2103 |
| BfuI | GTATCC | 1 cut(s) | 2068 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 629 |
| BglII | AGATCT | 1 cut(s) | 3467 |
| BlpI | GCTNAGC | 2 cut(s) | 595, 2039 |
| Bme1390I | CCNGG | 4 cut(s) | 92, 377, 535, 1146 |
| Bme18I | GGWCC | 2 cut(s) | 501, 758 |
| BmeT110I | CYCGRG | 1 cut(s) | 38 |
| BmgBI | CACGTC | 2 cut(s) | 1077, 1752 |
| BmgT120I | GGNCC | 2 cut(s) | 501, 758 |
| BmiI | GGNNCC | 5 cut(s) | 1143, 2128, 2288, 3115, 3285 |
| BmrFI | CCNGG | 4 cut(s) | 92, 377, 535, 1146 |
| BmrI | ACTGGG | 2 cut(s) | 711, 930 |
| BmtI | GCTAGC | 1 cut(s) | 2760 |
| BmuI | ACTGGG | 2 cut(s) | 711, 930 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1572, 1604 |
| BpmI | CTGGAG | 4 cut(s) | 74, 528, 746, 3111 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2865 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 595, 2039 |
| BpuEI | CTTGAG | 3 cut(s) | 1559, 2794, 3187 |
| BpuMI | CCSGG | 1 cut(s) | 377 |
| Bsa29I | ATCGAT | 2 cut(s) | 198, 494 |
| BsaI | GGTCTC | 1 cut(s) | 1202 |
| BsaJI | CCNNGG | 3 cut(s) | 375, 1145, 1180 |
| BsaWI | WCCGGW | 1 cut(s) | 588 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 389, 419, 772, 802 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 38, 767 |
| Bse118I | RCCGGY | 1 cut(s) | 22 |
| Bse21I | CCTNAGG | 1 cut(s) | 1279 |
| Bse3DI | GCAATG | 2 cut(s) | 1387, 1544 |
| BseAI | TCCGGA | 1 cut(s) | 588 |
| BseBI | CCWGG | 3 cut(s) | 92, 535, 1146 |
| BseCI | ATCGAT | 2 cut(s) | 198, 494 |
| BseDI | CCNNGG | 3 cut(s) | 375, 1145, 1180 |
| BseGI | GGATG | 8 cut(s) | 371, 545, 736, 949, 1666, 1675, 2569, 2797 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 38, 767 |
| BseMI | GCAATG | 2 cut(s) | 1387, 1544 |
| BseMII | CTCAG | 9 cut(s) | 368, 647, 656, 1293, 2053, 2109, 2181, 2856, 3089 |
| BseRI | GAGGAG | 5 cut(s) | 156, 223, 525, 2696, 3492 |
| BseYI | CCCAGC | 3 cut(s) | 14, 538, 1233 |
| BsgI | GTGCAG | 4 cut(s) | 980, 1862, 2131, 3503 |
| BshFI | GGCC | 1 cut(s) | 2101 |
| BshNI | GGYRCC | 1 cut(s) | 2126 |
| BshVI | ATCGAT | 2 cut(s) | 198, 494 |
| BsiHKAI | GWGCWC | 1 cut(s) | 90 |
| BsiHKCI | CYCGRG | 1 cut(s) | 38 |
| BsiSI | CCGG | 4 cut(s) | 23, 60, 377, 589 |
| BslFI | GGGAC | 3 cut(s) | 357, 903, 3393 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 38, 767 |
| BsmAI | GTCTC | 7 cut(s) | 205, 870, 1202, 1700, 2233, 2383, 2424 |
| BsmFI | GGGAC | 3 cut(s) | 357, 903, 3393 |
| BsmI | GAATGC | 3 cut(s) | 400, 1156, 2505 |
| BsnI | GGCC | 1 cut(s) | 2101 |
| Bso31I | GGTCTC | 1 cut(s) | 1202 |
| BsoBI | CYCGRG | 1 cut(s) | 38 |
| Bsp1286I | GDGCHC | 2 cut(s) | 90, 2289 |
| Bsp13I | TCCGGA | 1 cut(s) | 588 |
| Bsp1407I | TGTACA | 3 cut(s) | 1798, 3143, 3336 |
| Bsp143I | GATC | 8 cut(s) | 190, 328, 1369, 1513, 1611, 3307, 3324, 3467 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 595, 2039 |
| BspACI | CCGC | 5 cut(s) | 35, 176, 432, 524, 3249 |
| BspANI | GGCC | 1 cut(s) | 2101 |
| BspCNI | CTCAG | 9 cut(s) | 367, 646, 657, 1292, 2052, 2110, 2182, 2857, 3088 |
| BspDI | ATCGAT | 2 cut(s) | 198, 494 |
| BspEI | TCCGGA | 1 cut(s) | 588 |
| BspHI | TCATGA | 3 cut(s) | 129, 3327, 3447 |
| BspLI | GGNNCC | 5 cut(s) | 1143, 2128, 2288, 3115, 3285 |
| BspMAI | CTGCAG | 1 cut(s) | 2407 |
| BspMI | ACCTGC | 2 cut(s) | 810, 2103 |
| BspOI | GCTAGC | 1 cut(s) | 2760 |
| BspPI | GGATC | 2 cut(s) | 185, 1606 |
| BspQI | GCTCTTC | 1 cut(s) | 1410 |
| BspT107I | GGYRCC | 1 cut(s) | 2126 |
| BspTI | CTTAAG | 1 cut(s) | 2131 |
| BspTNI | GGTCTC | 1 cut(s) | 1202 |
| BsrBI | CCGCTC | 1 cut(s) | 37 |
| BsrDI | GCAATG | 2 cut(s) | 1387, 1544 |
| BsrFI | RCCGGY | 1 cut(s) | 22 |
| BsrGI | TGTACA | 3 cut(s) | 1798, 3143, 3336 |
| BssAI | RCCGGY | 1 cut(s) | 22 |
| BssECI | CCNNGG | 3 cut(s) | 375, 1145, 1180 |
| BssMI | GATC | 8 cut(s) | 190, 328, 1369, 1513, 1611, 3307, 3324, 3467 |
| BssNAI | GTATAC | 2 cut(s) | 1168, 2210 |
| BssT1I | CCWWGG | 1 cut(s) | 1180 |
| Bst1107I | GTATAC | 2 cut(s) | 1168, 2210 |
| Bst2UI | CCWGG | 3 cut(s) | 92, 535, 1146 |
| Bst4CI | ACNGT | 6 cut(s) | 530, 739, 853, 2575, 3006, 3431 |
| Bst6I | CTCTTC | 4 cut(s) | 225, 612, 933, 1410 |
| BstAFI | CTTAAG | 1 cut(s) | 2131 |
| BstAUI | TGTACA | 3 cut(s) | 1798, 3143, 3336 |
| BstC8I | GCNNGC | 9 cut(s) | 65, 469, 487, 1358, 1581, 2250, 2464, 2758, 3235 |
| BstF5I | GGATG | 8 cut(s) | 371, 545, 736, 949, 1666, 1675, 2569, 2797 |
| BstH2I | RGCGCY | 1 cut(s) | 117 |
| BstHHI | GCGC | 5 cut(s) | 97, 116, 382, 2547, 2937 |
| BstKTI | GATC | 8 cut(s) | 193, 331, 1372, 1516, 1614, 3310, 3327, 3470 |
| BstMAI | GTCTC | 7 cut(s) | 205, 870, 1202, 1700, 2233, 2383, 2424 |
| BstMBI | GATC | 8 cut(s) | 190, 328, 1369, 1513, 1611, 3307, 3324, 3467 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 94, 629, 1046, 2459, 2820, 3086 |
| BstNI | CCWGG | 3 cut(s) | 92, 535, 1146 |
| BstNSI | RCATGY | 4 cut(s) | 917, 1891, 2330, 2848 |
| BstSCI | CCNGG | 4 cut(s) | 90, 375, 533, 1144 |
| BstSFI | CTRYAG | 1 cut(s) | 2403 |
| BstX2I | RGATCY | 2 cut(s) | 190, 3467 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 563, 724, 1639 |
| BstYI | RGATCY | 2 cut(s) | 190, 3467 |
| BstZ17I | GTATAC | 2 cut(s) | 1168, 2210 |
| Bsu15I | ATCGAT | 2 cut(s) | 198, 494 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1279 |
| BsuI | GTATCC | 1 cut(s) | 2068 |
| BsuRI | GGCC | 1 cut(s) | 2101 |
| BsuTUI | ATCGAT | 2 cut(s) | 198, 494 |
| BtgZI | GCGATG | 1 cut(s) | 156 |
| BtrI | CACGTC | 2 cut(s) | 1077, 1752 |
| BtsCI | GGATG | 8 cut(s) | 371, 545, 736, 949, 1666, 1675, 2569, 2797 |
| BtsI | GCAGTG | 2 cut(s) | 963, 2412 |
| BtsIMutI | CAGTG | 9 cut(s) | 504, 724, 963, 1500, 2412, 2580, 2712, 3002, 3436 |
| BveI | ACCTGC | 2 cut(s) | 810, 2103 |
| Cac8I | GCNNGC | 9 cut(s) | 65, 469, 487, 1358, 1581, 2250, 2464, 2758, 3235 |
| CciI | TCATGA | 3 cut(s) | 129, 3327, 3447 |
| CfoI | GCGC | 5 cut(s) | 97, 116, 382, 2547, 2937 |
| Cfr10I | RCCGGY | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 2 cut(s) | 501, 758 |
| ClaI | ATCGAT | 2 cut(s) | 198, 494 |
| CseI | GACGC | 1 cut(s) | 170 |
| Csp6I | GTAC | 7 cut(s) | 82, 1030, 1417, 1799, 2519, 3144, 3337 |
| CviQI | GTAC | 7 cut(s) | 82, 1030, 1417, 1799, 2519, 3144, 3337 |
| DpnI | GATC | 8 cut(s) | 192, 330, 1371, 1515, 1613, 3309, 3326, 3469 |
| DpnII | GATC | 8 cut(s) | 190, 328, 1369, 1513, 1611, 3307, 3324, 3467 |
| DraI | TTTAAA | 1 cut(s) | 1932 |
| DraIII | CACNNNGTG | 1 cut(s) | 719 |
| Eam1104I | CTCTTC | 4 cut(s) | 225, 612, 933, 1410 |
| EarI | CTCTTC | 4 cut(s) | 225, 612, 933, 1410 |
| Ecl136II | GAGCTC | 1 cut(s) | 88 |
| Eco130I | CCWWGG | 1 cut(s) | 1180 |
| Eco24I | GRGCYC | 2 cut(s) | 90, 2289 |
| Eco31I | GGTCTC | 1 cut(s) | 1202 |
| Eco32I | GATATC | 1 cut(s) | 2710 |
| Eco47I | GGWCC | 2 cut(s) | 501, 758 |
| Eco47III | AGCGCT | 1 cut(s) | 115 |
| Eco53kI | GAGCTC | 1 cut(s) | 88 |
| Eco57I | CTGAAG | 3 cut(s) | 954, 1101, 1764 |
| Eco81I | CCTNAGG | 1 cut(s) | 1279 |
| Eco88I | CYCGRG | 1 cut(s) | 38 |
| EcoICRI | GAGCTC | 1 cut(s) | 88 |
| EcoRI | GAATTC | 4 cut(s) | 1241, 1519, 2020, 2197 |
| EcoRII | CCWGG | 3 cut(s) | 90, 533, 1144 |
| EcoRV | GATATC | 1 cut(s) | 2710 |
| EcoT14I | CCWWGG | 1 cut(s) | 1180 |
| EcoT38I | GRGCYC | 2 cut(s) | 90, 2289 |
| ErhI | CCWWGG | 1 cut(s) | 1180 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3116, 3148 |
| FaqI | GGGAC | 3 cut(s) | 357, 903, 3393 |
| FauNDI | CATATG | 2 cut(s) | 1951, 3211 |
| FbaI | TGATCA | 3 cut(s) | 1369, 1513, 3324 |
| FblI | GTMKAC | 2 cut(s) | 1167, 2209 |
| FokI | GGATG | 8 cut(s) | 358, 532, 743, 956, 1673, 1682, 2576, 2804 |
| FriOI | GRGCYC | 2 cut(s) | 90, 2289 |
| FspI | TGCGCA | 1 cut(s) | 2936 |
| GlaI | GCGC | 5 cut(s) | 96, 115, 381, 2546, 2936 |
| GsaI | CCCAGC | 3 cut(s) | 18, 542, 1237 |
| GsuI | CTGGAG | 4 cut(s) | 74, 528, 746, 3111 |
| HaeII | RGCGCY | 1 cut(s) | 117 |
| HaeIII | GGCC | 1 cut(s) | 2101 |
| HapII | CCGG | 4 cut(s) | 23, 60, 377, 589 |
| HgaI | GACGC | 1 cut(s) | 170 |
| HhaI | GCGC | 5 cut(s) | 97, 116, 382, 2547, 2937 |
| Hin6I | GCGC | 5 cut(s) | 95, 114, 380, 2545, 2935 |
| HinP1I | GCGC | 5 cut(s) | 95, 114, 380, 2545, 2935 |
| HincII | GTYRAC | 4 cut(s) | 73, 360, 408, 2953 |
| HindII | GTYRAC | 4 cut(s) | 73, 360, 408, 2953 |
| HindIII | AAGCTT | 4 cut(s) | 1092, 1942, 3231, 3402 |
| HinfI | GANTC | 8 cut(s) | 28, 213, 422, 1274, 1490, 2399, 2906, 3493 |
| HpaI | GTTAAC | 1 cut(s) | 73 |
| HpaII | CCGG | 4 cut(s) | 23, 60, 377, 589 |
| HphI | GGTGA | 9 cut(s) | 150, 322, 890, 1126, 1309, 1523, 2915, 2939, 3317 |
| HpyCH4III | ACNGT | 6 cut(s) | 530, 739, 853, 2575, 3006, 3431 |
| HpyCH4IV | ACGT | 3 cut(s) | 1076, 1751, 1828 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 94, 629, 1046, 2459, 2820, 3086 |
| HpySE526I | ACGT | 3 cut(s) | 1076, 1751, 1828 |
| HspAI | GCGC | 5 cut(s) | 95, 114, 380, 2545, 2935 |
| Kpn2I | TCCGGA | 1 cut(s) | 588 |
| Ksp22I | TGATCA | 3 cut(s) | 1369, 1513, 3324 |
| KspAI | GTTAAC | 1 cut(s) | 73 |
| Kzo9I | GATC | 8 cut(s) | 190, 328, 1369, 1513, 1611, 3307, 3324, 3467 |
| LguI | GCTCTTC | 1 cut(s) | 1410 |
| MaeII | ACGT | 3 cut(s) | 1076, 1751, 1828 |
| MaeIII | GTNAC | 6 cut(s) | 733, 2329, 2498, 2569, 2903, 2998 |
| MalI | GATC | 8 cut(s) | 192, 330, 1371, 1515, 1613, 3309, 3326, 3469 |
| MbiI | CCGCTC | 1 cut(s) | 37 |
| MboI | GATC | 8 cut(s) | 190, 328, 1369, 1513, 1611, 3307, 3324, 3467 |
| MfeI | CAATTG | 2 cut(s) | 1409, 2291 |
| MflI | RGATCY | 2 cut(s) | 190, 3467 |
| MhlI | GDGCHC | 2 cut(s) | 90, 2289 |
| MlyI | GAGTC | 4 cut(s) | 207, 2408, 2900, 3487 |
| MmeI | TCCRAC | 3 cut(s) | 1197, 2566, 3246 |
| MroI | TCCGGA | 1 cut(s) | 588 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1389 |
| MslI | CAYNNNNRTG | 5 cut(s) | 494, 1365, 2384, 2514, 2828 |
| MspA1I | CMGCKG | 3 cut(s) | 178, 964, 2978 |
| MspCI | CTTAAG | 1 cut(s) | 2131 |
| MspI | CCGG | 4 cut(s) | 23, 60, 377, 589 |
| MspR9I | CCNGG | 4 cut(s) | 92, 377, 535, 1146 |
| MunI | CAATTG | 2 cut(s) | 1409, 2291 |
| Mva1269I | GAATGC | 3 cut(s) | 400, 1156, 2505 |
| MvaI | CCWGG | 3 cut(s) | 92, 535, 1146 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 94, 629, 1046, 2459, 2820, 3086 |
| NciI | CCSGG | 1 cut(s) | 377 |
| NdeI | CATATG | 2 cut(s) | 1951, 3211 |
| NdeII | GATC | 8 cut(s) | 190, 328, 1369, 1513, 1611, 3307, 3324, 3467 |
| NheI | GCTAGC | 1 cut(s) | 2756 |
| NlaIV | GGNNCC | 5 cut(s) | 1143, 2128, 2288, 3115, 3285 |
| NmuCI | GTSAC | 3 cut(s) | 2329, 2498, 2903 |
| NsbI | TGCGCA | 1 cut(s) | 2936 |
| NspI | RCATGY | 4 cut(s) | 917, 1891, 2330, 2848 |
| PagI | TCATGA | 3 cut(s) | 129, 3327, 3447 |
| PaqCI | CACCTGC | 1 cut(s) | 810 |
| PciI | ACATGT | 1 cut(s) | 2326 |
| PciSI | GCTCTTC | 1 cut(s) | 1410 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 343 |
| PctI | GAATGC | 3 cut(s) | 400, 1156, 2505 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1389 |
| PfeI | GAWTC | 4 cut(s) | 28, 422, 1274, 1490 |
| PleI | GAGTC | 4 cut(s) | 207, 2407, 2900, 3487 |
| PpsI | GAGTC | 4 cut(s) | 207, 2407, 2900, 3487 |
| PscI | ACATGT | 1 cut(s) | 2326 |
| PshBI | ATTAAT | 1 cut(s) | 1626 |
| PsiI | TTATAA | 1 cut(s) | 2780 |
| Psp124BI | GAGCTC | 1 cut(s) | 90 |
| Psp1406I | AACGTT | 1 cut(s) | 1828 |
| Psp6I | CCWGG | 3 cut(s) | 90, 533, 1144 |
| PspFI | CCCAGC | 3 cut(s) | 14, 538, 1233 |
| PspGI | CCWGG | 3 cut(s) | 90, 533, 1144 |
| PspN4I | GGNNCC | 5 cut(s) | 1143, 2128, 2288, 3115, 3285 |
| PspPI | GGNCC | 2 cut(s) | 501, 758 |
| PstI | CTGCAG | 1 cut(s) | 2407 |
| PsuI | RGATCY | 2 cut(s) | 190, 3467 |
| PvuII | CAGCTG | 2 cut(s) | 964, 2978 |
| RsaI | GTAC | 7 cut(s) | 83, 1031, 1418, 1800, 2520, 3145, 3338 |
| RsaNI | GTAC | 7 cut(s) | 82, 1030, 1417, 1799, 2519, 3144, 3337 |
| RseI | CAYNNNNRTG | 5 cut(s) | 494, 1365, 2384, 2514, 2828 |
| SacI | GAGCTC | 1 cut(s) | 90 |
| SapI | GCTCTTC | 1 cut(s) | 1410 |
| Sau3AI | GATC | 8 cut(s) | 190, 328, 1369, 1513, 1611, 3307, 3324, 3467 |
| Sau96I | GGNCC | 2 cut(s) | 501, 758 |
| SchI | GAGTC | 4 cut(s) | 207, 2408, 2900, 3487 |
| ScrFI | CCNGG | 4 cut(s) | 92, 377, 535, 1146 |
| SduI | GDGCHC | 2 cut(s) | 90, 2289 |
| SfcI | CTRYAG | 1 cut(s) | 2403 |
| SinI | GGWCC | 2 cut(s) | 501, 758 |
| SmiI | ATTTAAAT | 1 cut(s) | 1932 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 494, 1365, 2384, 2514, 2828 |
| SmlI | CTYRAG | 5 cut(s) | 1538, 2131, 2809, 3202, 3509 |
| SmoI | CTYRAG | 5 cut(s) | 1538, 2131, 2809, 3202, 3509 |
| SpeI | ACTAGT | 2 cut(s) | 2767, 2921 |
| SsiI | CCGC | 5 cut(s) | 35, 176, 432, 524, 3249 |
| SspI | AATATT | 1 cut(s) | 3291 |
| SstI | GAGCTC | 1 cut(s) | 90 |
| StyD4I | CCNGG | 4 cut(s) | 90, 375, 533, 1144 |
| StyI | CCWWGG | 1 cut(s) | 1180 |
| SwaI | ATTTAAAT | 1 cut(s) | 1932 |
| TaaI | ACNGT | 6 cut(s) | 530, 739, 853, 2575, 3006, 3431 |
| TaiI | ACGT | 3 cut(s) | 1079, 1754, 1831 |
| TatI | WGTACW | 5 cut(s) | 1029, 1798, 2518, 3143, 3336 |
| TauI | GCSGC | 1 cut(s) | 178 |
| TfiI | GAWTC | 4 cut(s) | 28, 422, 1274, 1490 |
| TscAI | CASTG | 9 cut(s) | 511, 724, 963, 1500, 2412, 2580, 2719, 3009, 3436 |
| TseFI | GTSAC | 3 cut(s) | 2329, 2498, 2903 |
| Tsp45I | GTSAC | 3 cut(s) | 2329, 2498, 2903 |
| TspRI | CASTG | 9 cut(s) | 511, 724, 963, 1500, 2412, 2580, 2719, 3009, 3436 |
| Vha464I | CTTAAG | 1 cut(s) | 2131 |
| VpaK11BI | GGWCC | 2 cut(s) | 501, 758 |
| VspI | ATTAAT | 1 cut(s) | 1626 |
| XceI | RCATGY | 4 cut(s) | 917, 1891, 2330, 2848 |
| XmiI | GTMKAC | 2 cut(s) | 1167, 2209 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1389 |