FvH4_4g08481

Endo-1,3(4)-beta-glucanase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Reverse (-)
8518299 .. 8520219
1921 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g08481.t1

Sequence Viewer

Length: 1386 bp
ATGAAGCCAGATGAGAAGTGTTTGGTATATGCCATGTCAACCTTGGGTGCGCCCTTTACATGGCAGGAGTTGGGATTCAAACTTAACTTTCAAAATTCCTGTCAGCTGCTCTCATCTTATAATAATGTGTCTGTTACAAGTTTGGAGTTGCTGCAAAATGAGAATCGGATTGATCAAGTAGATGGCAAAGTTATTGATGCAGTCATTCAGTTGGATTTATATGAAGTTACTGATGTGATCTTATCAAATGACAGAGTTTGCTATATGAATACAACCCTTCTTGAGGATCAGGAAAGATGGAACAAAGAGAGATTGGACCCTGAGGAAATTATTGGTTCTCTTAATAACAATTTTGAGTTATCACCTTGGAGGCACTCTTCTGGTCTATATTCTCTGAAGTGGTTGTTTGATCTCCAGTTGTCCAGAAATTCTCCTGTAACATGCAGGTATGATTACTTCCGGATCATAATGTACAGTGGAACTAAAGTTGCAGCATTCTTGTGCTTTTGCCTGGCCAATTGTGGTTCATTATCAGTGCAACTACATAATTATCATAAGAATCCGGGAGAAGTGACAAGTTTAATTGATCGGGAAAGGTGTCATGGATACCATATTGTTGTACATGATGATGGGATGATAATCATGAAAATTGACAATGCTGATGGGGACAAGGAATTCAGTATTTCCTTTCTTCAGAATATGTGTGTCTATTTGCAGCTACCTCTTTTGGTTAAGCAATCAACATTGGCTTCAAGTGTAACAGAAGTCTTGGCATATTATAATAATCATCAGATGGAGGACAAAAATGTTGTGCATGCCTTGTTGTATGAAGAGGGATTCAACATTGATTTCTTTAAGAAATCAGAAGACATGGCACTTGAGATTTTGATAGAATCTTTGCAGACTCATGATGACTGTGTGGCTGTTTTGGAGGGTCTCGTGGATAAAAGCAGTGATAGTGAGCTTATTGGTGTTATAAGGGACTCATGGATTTTGAAGCCCAATCATGTTTCGGTCACTTGTGATCGGAGTAAGGGTGTTAAGGGGGACTCAAAAACTGAAATCATGGCTGGATTTTGTGAAGATGTGGAGGGTAGCAGTTTGACACCAGTTGCACCAGAACCTTCATATTCTTATGAGAAGTTGGTTACCTGGACAGCAATGTTGGCTTTGATTGCAGATGAGGTAGGTTGTGAAATTCTTGAGTTCTGGTATGCAGTCTTGGATATATGGTGGAGCAGCAAAAGAAGGAGAGAAAGAGATTGGTGGTGGTCTCGTCGCCAGGGGTGGTCGGACGACGCCGCTCCGGCGTGGAGACGACAGAGAAAACGAGAGAGAGGAGAGAAGAAGAGAGAATGCGGCGAAGAGGAGAGGAGAGAAAAATGA

Protein Analysis

462

Amino Acids

53.28

Weight (kDa)

5.0

Isoelectric Point (pI)

51.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 120, 780, 977
Acc36I ACCTGC 1 cut(s) 435
AccBSI CCGCTC 1 cut(s) 1304
AccIII TCCGGA 1 cut(s) 459
AciI CCGC 2 cut(s) 1302, 1359
AclWI GGATC 2 cut(s) 294, 470
AcoI YGGCCR 1 cut(s) 513
AcsI RAATTY 4 cut(s) 94, 427, 674, 1197
AcuI CTGAAG 2 cut(s) 416, 677
AcyI GRCGYC 1 cut(s) 1299
AfaI GTAC 2 cut(s) 473, 621
AfiI CCNNNNNNNGG 2 cut(s) 60, 283
AgsI TTSAA 5 cut(s) 79, 92, 753, 841, 997
AjnI CCWGG 3 cut(s) 510, 1151, 1281
AluBI AGCT 3 cut(s) 106, 718, 964
AluI AGCT 3 cut(s) 106, 718, 964
Alw26I GTCTC 3 cut(s) 941, 1278, 1309
AlwI GGATC 2 cut(s) 294, 470
Aor13HI TCCGGA 1 cut(s) 459
AoxI GGCC 1 cut(s) 513
ApeKI GCWGC 5 cut(s) 106, 151, 491, 715, 1239
ApoI RAATTY 4 cut(s) 94, 427, 674, 1197
ArsI GACNNNNNNTTYG 2 cut(s) 85, 117
AspLEI GCGC 1 cut(s) 52
AspS9I GGNCC 1 cut(s) 316
AsuC2I CCSGG 1 cut(s) 564
AsuHPI GGTGA 1 cut(s) 354
AvaII GGWCC 1 cut(s) 316
AxyI CCTNAGG 1 cut(s) 321
BalI TGGCCA 1 cut(s) 515
BarI GAAGNNNNNNTAC 2 cut(s) 440, 472
BauI CACGAG 1 cut(s) 938
BbsI GAAGAC 1 cut(s) 873
BbvI GCAGC 5 cut(s) 93, 138, 503, 727, 1251
BccI CCATC 5 cut(s) 176, 291, 623, 656, 787
BciT130I CCWGG 3 cut(s) 512, 1153, 1283
BciVI GTATCC 1 cut(s) 599
BclI TGATCA 1 cut(s) 172
BcnI CCSGG 1 cut(s) 564
BcoDI GTCTC 3 cut(s) 941, 1278, 1309
BfuAI ACCTGC 1 cut(s) 435
BfuI GTATCC 1 cut(s) 599
BglI GCCNNNNNGGC 1 cut(s) 1307
BisI GCNGC 7 cut(s) 107, 152, 492, 716, 1240, 1302, 1360
BlsI GCNGC 7 cut(s) 108, 153, 493, 717, 1241, 1303, 1361
Bme1390I CCNGG 4 cut(s) 512, 564, 1153, 1283
Bme18I GGWCC 1 cut(s) 316
BmgT120I GGNCC 1 cut(s) 316
BmiI GGNNCC 1 cut(s) 318
BmrFI CCNGG 4 cut(s) 512, 564, 1153, 1283
BmsI GCATC 1 cut(s) 187
BpiI GAAGAC 1 cut(s) 873
BpmI CTGGAG 1 cut(s) 398
BpuEI CTTGAG 3 cut(s) 302, 899, 1223
BpuMI CCSGG 1 cut(s) 564
BsaBI GATNNNNATC 1 cut(s) 638
BsaHI GRCGYC 1 cut(s) 1299
BsaI GGTCTC 2 cut(s) 941, 1278
BsaJI CCNNGG 3 cut(s) 42, 365, 1282
BsaWI WCCGGW 1 cut(s) 459
BsaXI ACNNNNNCTCC 2 cut(s) 1021, 1051
Bsc4I CCNNNNNNNGG 2 cut(s) 60, 283
Bse1I ACTGG 2 cut(s) 415, 1109
Bse21I CCTNAGG 1 cut(s) 321
Bse3DI GCAATG 1 cut(s) 1167
Bse8I GATNNNNATC 1 cut(s) 638
BseAI TCCGGA 1 cut(s) 459
BseBI CCWGG 3 cut(s) 512, 1153, 1283
BseDI CCNNGG 3 cut(s) 42, 365, 1282
BseGI GGATG 1 cut(s) 639
BseJI GATNNNNATC 1 cut(s) 638
BseLI CCNNNNNNNGG 2 cut(s) 60, 283
BseMI GCAATG 1 cut(s) 1167
BseMII CTCAG 1 cut(s) 312
BseNI ACTGG 2 cut(s) 415, 1109
BseRI GAGGAG 2 cut(s) 1353, 1382
BseXI GCAGC 5 cut(s) 93, 138, 503, 727, 1251
BshFI GGCC 1 cut(s) 515
BsiSI CCGG 3 cut(s) 460, 563, 1307
BslFI GGGAC 3 cut(s) 680, 995, 1061
BslI CCNNNNNNNGG 2 cut(s) 60, 283
BsmAI GTCTC 3 cut(s) 941, 1278, 1309
BsmBI CGTCTC 1 cut(s) 1309
BsmFI GGGAC 3 cut(s) 680, 995, 1061
BsmI GAATGC 2 cut(s) 494, 1361
BsnI GGCC 1 cut(s) 515
Bso31I GGTCTC 2 cut(s) 941, 1278
Bsp13I TCCGGA 1 cut(s) 459
Bsp1407I TGTACA 2 cut(s) 471, 619
Bsp143I GATC 7 cut(s) 172, 237, 286, 409, 462, 586, 1024
BspACI CCGC 2 cut(s) 1302, 1359
BspANI GGCC 1 cut(s) 515
BspCNI CTCAG 1 cut(s) 313
BspEI TCCGGA 1 cut(s) 459
BspHI TCATGA 2 cut(s) 642, 907
BspLI GGNNCC 1 cut(s) 318
BspMI ACCTGC 1 cut(s) 435
BspPI GGATC 2 cut(s) 294, 470
BspTNI GGTCTC 2 cut(s) 941, 1278
BsrBI CCGCTC 1 cut(s) 1304
BsrDI GCAATG 1 cut(s) 1167
BsrGI TGTACA 2 cut(s) 471, 619
BsrI ACTGG 2 cut(s) 415, 1109
BssECI CCNNGG 3 cut(s) 42, 365, 1282
BssMI GATC 7 cut(s) 172, 237, 286, 409, 462, 586, 1024
BssNI GRCGYC 1 cut(s) 1299
BssSI CACGAG 1 cut(s) 938
BssT1I CCWWGG 2 cut(s) 42, 365
Bst2BI CACGAG 1 cut(s) 938
Bst2UI CCWGG 3 cut(s) 512, 1153, 1283
Bst4CI ACNGT 2 cut(s) 476, 917
Bst6I CTCTTC 4 cut(s) 382, 825, 1343, 1359
BstACI GRCGYC 1 cut(s) 1299
BstAUI TGTACA 2 cut(s) 471, 619
BstC8I GCNNGC 1 cut(s) 816
BstDEI CTNAG 1 cut(s) 321
BstEII GGTNACC 1 cut(s) 1147
BstENI CCTNNNNNAGG 1 cut(s) 281
BstF5I GGATG 1 cut(s) 639
BstHHI GCGC 1 cut(s) 52
BstKTI GATC 7 cut(s) 175, 240, 289, 412, 465, 589, 1027
BstMAI GTCTC 3 cut(s) 941, 1278, 1309
BstMBI GATC 7 cut(s) 172, 237, 286, 409, 462, 586, 1024
BstMWI GCNNNNNNNGC 3 cut(s) 1166, 1175, 1307
BstNI CCWGG 3 cut(s) 512, 1153, 1283
BstNSI RCATGY 2 cut(s) 444, 818
BstPI GGTNACC 1 cut(s) 1147
BstSCI CCNGG 4 cut(s) 510, 562, 1151, 1281
BstV1I GCAGC 5 cut(s) 93, 138, 503, 727, 1251
BstV2I GAAGAC 1 cut(s) 873
Bsu36I CCTNAGG 1 cut(s) 321
BsuI GTATCC 1 cut(s) 599
BsuRI GGCC 1 cut(s) 515
BtsCI GGATG 1 cut(s) 639
BtsI GCAGTG 1 cut(s) 958
BtsIMutI CAGTG 3 cut(s) 481, 540, 958
BveI ACCTGC 1 cut(s) 435
Cac8I GCNNGC 1 cut(s) 816
CciI TCATGA 2 cut(s) 642, 907
CfoI GCGC 1 cut(s) 52
Cfr13I GGNCC 1 cut(s) 316
CseI GACGC 1 cut(s) 1307
Csp6I GTAC 2 cut(s) 472, 620
CviQI GTAC 2 cut(s) 472, 620
DdeI CTNAG 1 cut(s) 321
DpnI GATC 7 cut(s) 174, 239, 288, 411, 464, 588, 1026
DpnII GATC 7 cut(s) 172, 237, 286, 409, 462, 586, 1024
EaeI YGGCCR 1 cut(s) 513
Eam1104I CTCTTC 4 cut(s) 382, 825, 1343, 1359
EarI CTCTTC 4 cut(s) 382, 825, 1343, 1359
Eco130I CCWWGG 2 cut(s) 42, 365
Eco31I GGTCTC 2 cut(s) 941, 1278
Eco47I GGWCC 1 cut(s) 316
Eco57I CTGAAG 2 cut(s) 416, 677
Eco81I CCTNAGG 1 cut(s) 321
Eco91I GGTNACC 1 cut(s) 1147
EcoNI CCTNNNNNAGG 1 cut(s) 281
EcoO65I GGTNACC 1 cut(s) 1147
EcoRI GAATTC 1 cut(s) 674
EcoRII CCWGG 3 cut(s) 510, 1151, 1281
EcoT14I CCWWGG 2 cut(s) 42, 365
ErhI CCWWGG 2 cut(s) 42, 365
Esp3I CGTCTC 1 cut(s) 1309
FaqI GGGAC 3 cut(s) 680, 995, 1061
FbaI TGATCA 1 cut(s) 172
Fnu4HI GCNGC 7 cut(s) 107, 152, 492, 716, 1240, 1302, 1360
FokI GGATG 1 cut(s) 646
Fsp4HI GCNGC 7 cut(s) 107, 152, 492, 716, 1240, 1302, 1360
GlaI GCGC 1 cut(s) 51
GluI GCNGC 7 cut(s) 107, 152, 492, 716, 1240, 1302, 1360
GsuI CTGGAG 1 cut(s) 398
HaeIII GGCC 1 cut(s) 515
HapII CCGG 3 cut(s) 460, 563, 1307
HgaI GACGC 1 cut(s) 1307
HhaI GCGC 1 cut(s) 52
Hin1I GRCGYC 1 cut(s) 1299
Hin6I GCGC 1 cut(s) 50
HinP1I GCGC 1 cut(s) 50
HincII GTYRAC 1 cut(s) 39
HindII GTYRAC 1 cut(s) 39
HinfI GANTC 8 cut(s) 75, 163, 559, 837, 893, 904, 983, 1049
HpaII CCGG 3 cut(s) 460, 563, 1307
HphI GGTGA 1 cut(s) 354
Hpy166II GTNNAC 1 cut(s) 39
Hpy188I TCNGA 7 cut(s) 168, 396, 696, 792, 865, 1029, 1294
Hpy188III TCNNGA 8 cut(s) 281, 290, 423, 460, 590, 643, 908, 1202
Hpy8I GTNNAC 1 cut(s) 39
Hpy99I CGWCG 2 cut(s) 1281, 1301
HpyAV CCTTC 3 cut(s) 287, 1134, 1242
HpyCH4III ACNGT 2 cut(s) 476, 917
HpyF10VI GCNNNNNNNGC 3 cut(s) 1166, 1175, 1307
HpyF3I CTNAG 1 cut(s) 321
Hsp92I GRCGYC 1 cut(s) 1299
HspAI GCGC 1 cut(s) 50
Kpn2I TCCGGA 1 cut(s) 459
Ksp22I TGATCA 1 cut(s) 172
Kzo9I GATC 7 cut(s) 172, 237, 286, 409, 462, 586, 1024
LmnI GCTCC 2 cut(s) 1236, 1309
Lsp1109I GCAGC 5 cut(s) 93, 138, 503, 727, 1251
LweI GCATC 1 cut(s) 187
MaeIII GTNAC 7 cut(s) 133, 226, 436, 571, 757, 1015, 1147
MalI GATC 7 cut(s) 174, 239, 288, 411, 464, 588, 1026
MbiI CCGCTC 1 cut(s) 1304
MboI GATC 7 cut(s) 172, 237, 286, 409, 462, 586, 1024
MboII GAAGA 8 cut(s) 369, 683, 842, 878, 1094, 1357, 1360, 1376
MfeI CAATTG 1 cut(s) 517
MlsI TGGCCA 1 cut(s) 515
MluNI TGGCCA 1 cut(s) 515
MlyI GAGTC 3 cut(s) 898, 977, 1043
MmeI TCCRAC 2 cut(s) 192, 1272
Mox20I TGGCCA 1 cut(s) 515
MroI TCCGGA 1 cut(s) 459
MscI TGGCCA 1 cut(s) 515
MseI TTAA 6 cut(s) 84, 342, 581, 732, 855, 1041
MslI CAYNNNNRTG 2 cut(s) 499, 627
Msp20I TGGCCA 1 cut(s) 515
MspA1I CMGCKG 1 cut(s) 106
MspI CCGG 3 cut(s) 460, 563, 1307
MspR9I CCNGG 4 cut(s) 512, 564, 1153, 1283
MunI CAATTG 1 cut(s) 517
Mva1269I GAATGC 2 cut(s) 494, 1361
MvaI CCWGG 3 cut(s) 512, 1153, 1283
MwoI GCNNNNNNNGC 3 cut(s) 1166, 1175, 1307
NciI CCSGG 1 cut(s) 564
NdeII GATC 7 cut(s) 172, 237, 286, 409, 462, 586, 1024
NlaIV GGNNCC 1 cut(s) 318
NmuCI GTSAC 2 cut(s) 571, 1015
NspI RCATGY 2 cut(s) 444, 818
PaeI GCATGC 1 cut(s) 818
PagI TCATGA 2 cut(s) 642, 907
PctI GAATGC 2 cut(s) 494, 1361
PfeI GAWTC 5 cut(s) 75, 163, 559, 837, 893
PfoI TCCNGGA 1 cut(s) 562
PkrI GCNGC 7 cut(s) 108, 153, 493, 717, 1241, 1303, 1361
PleI GAGTC 3 cut(s) 898, 977, 1043
PpsI GAGTC 3 cut(s) 898, 977, 1043
PsiI TTATAA 3 cut(s) 120, 780, 977
Psp6I CCWGG 3 cut(s) 510, 1151, 1281
PspEI GGTNACC 1 cut(s) 1147
PspGI CCWGG 3 cut(s) 510, 1151, 1281
PspN4I GGNNCC 1 cut(s) 318
PspPI GGNCC 1 cut(s) 316
PvuII CAGCTG 1 cut(s) 106
RsaI GTAC 2 cut(s) 473, 621
RsaNI GTAC 2 cut(s) 472, 620
RseI CAYNNNNRTG 2 cut(s) 499, 627
SaqAI TTAA 6 cut(s) 84, 342, 581, 732, 855, 1041
SatI GCNGC 7 cut(s) 107, 152, 492, 716, 1240, 1302, 1360
Sau3AI GATC 7 cut(s) 172, 237, 286, 409, 462, 586, 1024
Sau96I GGNCC 1 cut(s) 316
SchI GAGTC 3 cut(s) 898, 977, 1043
ScrFI CCNGG 4 cut(s) 512, 564, 1153, 1283
SfaNI GCATC 1 cut(s) 187
SinI GGWCC 1 cut(s) 316
SmiMI CAYNNNNRTG 2 cut(s) 499, 627
SmlI CTYRAG 3 cut(s) 281, 878, 1202
SmoI CTYRAG 3 cut(s) 281, 878, 1202
SphI GCATGC 1 cut(s) 818
SsiI CCGC 2 cut(s) 1302, 1359
StyD4I CCNGG 4 cut(s) 510, 562, 1151, 1281
StyI CCWWGG 2 cut(s) 42, 365
TaaI ACNGT 2 cut(s) 476, 917
TaqII GACCGA 1 cut(s) 1003
TatI WGTACW 2 cut(s) 471, 619
TauI GCSGC 2 cut(s) 1304, 1362
TfiI GAWTC 5 cut(s) 75, 163, 559, 837, 893
Tru1I TTAA 6 cut(s) 84, 342, 581, 732, 855, 1041
Tru9I TTAA 6 cut(s) 84, 342, 581, 732, 855, 1041
TscAI CASTG 3 cut(s) 481, 540, 958
TseFI GTSAC 2 cut(s) 571, 1015
TseI GCWGC 5 cut(s) 106, 151, 491, 715, 1239
Tsp45I GTSAC 2 cut(s) 571, 1015
TspDTI ATGAA 7 cut(s) 17, 237, 281, 516, 659, 843, 1116
TspRI CASTG 3 cut(s) 481, 540, 958
VpaK11BI GGWCC 1 cut(s) 316
XagI CCTNNNNNAGG 1 cut(s) 281
XapI RAATTY 4 cut(s) 94, 427, 674, 1197
XceI RCATGY 2 cut(s) 444, 818
XcmI CCANNNNNNNNNTGG 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.