Rmu_sc0003002.1_g000038
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003002.1
Physical Location & Seq
Forward (+)
155733 .. 157526
1794 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003002.1_g000038.1.cds

Sequence Viewer

Length: 1794 bp
atgaagcttcaagtcgagttagaggagacagcggcgggatttcgtgaacttcacaaatctatggccgaaacggagacggagcaagctatattccagtccgagatattaaacttattgaggcaatttcagttggagcgaatagctcagttgaggccgccaccaccaccacaatatccaccaacttcgctgcctccgtttcctgcttcgaaccctacaccgttggcacagttcaccgccagcccacttcctctgttggacggggctcctcatcctattcggacgcccaaaatccatagctcgcgactccaaatctacactccaccgctagcaaagcccaccaccaagccgcctcctctgctcaatggcgccgttttggctcagcctaacaacaaccttgcatccttttgctcgaagggggagagtgtcgagaaaacggttgaggtgcatagtggagttggtagagagttcaatgagcttgagagtgtcagtgctaagcaggacgatggtggtttcgttgaggataaggagcatgtaggcttcacaattcctttaatatataaagctttgaatacaggaacaggaaatgatgaaattgtgaatgccaaagttgaagttgaagtagtggaaactctttctgaacattctgatgagaaatttaaatctgcgactactgacattttgatgaaattttgttgcttgcacaaacgtgatcaactttataagcttagcagtggaatatcagaatttgatgccctccaattgttcggtaaaagcttgcaattagagggattagttagtgatagaaagataggagatgctaagtttaagtggctacttgaatcatttatagtacctactgttgacaagacttcaatggattattttcttgaggaattccattctgtaccttacagttatcaaaattggcgtgcaatactcatttggttcttggcagctatgatccaatgtagtcttaaccccactatgttaattcacaatatcttactgggtgatatagatggaagagtgagtttgcattttgttagtaagatggagacaaaagcaaacattgttcagaagatgtttgatggaaattggaagtggaaatctcaaatcacttttggaacttcagtaggtgtgattagtgtcaaagagtttaatgtggatttctttggattttatatggtgttagataagaagtgtttggaaaagacaatttgtaatctgcacttttgcatgtcatctttgaatttaaagttactgcaagttccagttcatttaagtagcagaggctttggctttacacatgagtggcatcttggaaacatagtttggaatatagcaggaaatacacagaagctatttgttgctatgcatggcagagagaatgaaaccagattttcaatccttcaccattggttccctatttctttgaatgatgcgcatagacaagcaaccaaaagttctggcagaattgaagctcttgtcattgatcaggaaaacaattttcagcgaggtgattcttatcttgacatggttactggtcttttcaaaaatgatttcagcttatcttcttccaggaataaggagggcctcatattagatttaggtcttagttgtggaacaattgatatatcttatttaaagatatttaatggtgtttttgaggtgacggcagtaagctttgagtcatttggaggagagaattctaaccatgcttggctgaacttcatagtgagtgaattcactataattaaattcaccgttagcttactttacttgagacctacttga
Functional Annotation

Protein Analysis

597

Amino Acids

67.23

Weight (kDa)

6.04

Isoelectric Point (pI)

38.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 720
Acc16I TGCGCA 1 cut(s) 1443
AccB1I GGYRCC 1 cut(s) 365
AccII CGCG 1 cut(s) 301
AciI CCGC 6 cut(s) 32, 35, 155, 234, 323, 347
AclWI GGATC 1 cut(s) 955
AcoI YGGCCR 1 cut(s) 63
AcsI RAATTY 8 cut(s) 653, 686, 743, 893, 1249, 1705, 1742, 1757
AcuI CTGAAG 1 cut(s) 1113
AcyI GRCGYC 2 cut(s) 281, 366
AfaI GTAC 2 cut(s) 852, 906
AjnI CCWGG 1 cut(s) 1577
AjuI GAANNNNNNNTTGG 2 cut(s) 1315, 1347
AleI CACNNNNGTG 2 cut(s) 705, 1309
Alw26I GTCTC 4 cut(s) 20, 68, 1049, 1777
AlwI GGATC 1 cut(s) 955
AoxI GGCC 3 cut(s) 63, 152, 1591
ApeKI GCWGC 2 cut(s) 187, 953
ApoI RAATTY 8 cut(s) 653, 686, 743, 893, 1249, 1705, 1742, 1757
AspLEI GCGC 2 cut(s) 368, 1444
AspS9I GGNCC 1 cut(s) 1591
AsuHPI GGTGA 6 cut(s) 223, 1022, 1403, 1529, 1681, 1753
AsuII TTCGAA 1 cut(s) 206
AsuNHI GCTAGC 1 cut(s) 325
BanI GGYRCC 1 cut(s) 365
BanII GRGCYC 1 cut(s) 265
BbvI GCAGC 2 cut(s) 174, 965
BccI CCATC 4 cut(s) 497, 1013, 1045, 1082
BceAI ACGGC 2 cut(s) 353, 1689
BciT130I CCWGG 1 cut(s) 1579
BclI TGATCA 2 cut(s) 709, 1492
BcoDI GTCTC 4 cut(s) 20, 68, 1049, 1777
BfaI CTAG 1 cut(s) 326
BfoI RGCGCY 1 cut(s) 369
BglI GCCNNNNNGGC 1 cut(s) 374
BisI GCNGC 5 cut(s) 33, 155, 188, 347, 954
BlpI GCTNAGC 3 cut(s) 378, 492, 725
BlsI GCNGC 5 cut(s) 34, 156, 189, 348, 955
Bme1390I CCNGG 1 cut(s) 1579
BmgT120I GGNCC 1 cut(s) 1591
BmiI GGNNCC 3 cut(s) 264, 367, 1421
BmrFI CCNGG 1 cut(s) 1579
BmrI ACTGGG 1 cut(s) 1016
BmsI GCATC 5 cut(s) 407, 739, 805, 1324, 1429
BmtI GCTAGC 1 cut(s) 329
BmuI ACTGGG 1 cut(s) 1016
Bpu1102I GCTNAGC 3 cut(s) 378, 492, 725
Bpu14I TTCGAA 1 cut(s) 206
BpuEI CTTGAG 2 cut(s) 497, 908
BsaBI GATNNNNATC 1 cut(s) 1524
BsaHI GRCGYC 2 cut(s) 281, 366
BsaI GGTCTC 1 cut(s) 1777
Bse1I ACTGG 4 cut(s) 94, 1011, 1271, 1546
Bse8I GATNNNNATC 1 cut(s) 1524
BseBI CCWGG 1 cut(s) 1579
BseGI GGATG 2 cut(s) 268, 398
BseJI GATNNNNATC 1 cut(s) 1524
BseMII CTCAG 2 cut(s) 158, 392
BseNI ACTGG 4 cut(s) 94, 1011, 1271, 1546
BseRI GAGGAG 4 cut(s) 38, 255, 342, 1713
BseXI GCAGC 2 cut(s) 174, 965
BsgI GTGCAG 1 cut(s) 1211
Bsh1236I CGCG 1 cut(s) 301
BshFI GGCC 3 cut(s) 65, 154, 1593
BshNI GGYRCC 1 cut(s) 365
BsmAI GTCTC 4 cut(s) 20, 68, 1049, 1777
BsmBI CGTCTC 1 cut(s) 68
BsmI GAATGC 1 cut(s) 604
BsnI GGCC 3 cut(s) 65, 154, 1593
Bso31I GGTCTC 1 cut(s) 1777
Bsp119I TTCGAA 1 cut(s) 206
Bsp1286I GDGCHC 1 cut(s) 265
Bsp143I GATC 3 cut(s) 709, 960, 1492
Bsp1720I GCTNAGC 3 cut(s) 378, 492, 725
Bsp68I TCGCGA 1 cut(s) 301
BspACI CCGC 6 cut(s) 32, 35, 155, 234, 323, 347
BspANI GGCC 3 cut(s) 65, 154, 1593
BspCNI CTCAG 2 cut(s) 157, 391
BspFNI CGCG 1 cut(s) 301
BspLI GGNNCC 3 cut(s) 264, 367, 1421
BspOI GCTAGC 1 cut(s) 329
BspPI GGATC 1 cut(s) 955
BspT104I TTCGAA 1 cut(s) 206
BspT107I GGYRCC 1 cut(s) 365
BspTNI GGTCTC 1 cut(s) 1777
BsrI ACTGG 4 cut(s) 94, 1011, 1271, 1546
BssMI GATC 3 cut(s) 709, 960, 1492
BssNI GRCGYC 2 cut(s) 281, 366
Bst2UI CCWGG 1 cut(s) 1579
Bst4CI ACNGT 6 cut(s) 219, 228, 436, 859, 914, 1765
Bst6I CTCTTC 1 cut(s) 1018
BstACI GRCGYC 2 cut(s) 281, 366
BstBI TTCGAA 1 cut(s) 206
BstC8I GCNNGC 7 cut(s) 84, 238, 299, 327, 698, 776, 930
BstDEI CTNAG 6 cut(s) 144, 378, 492, 725, 819, 1613
BstF5I GGATG 2 cut(s) 268, 398
BstFNI CGCG 1 cut(s) 301
BstH2I RGCGCY 1 cut(s) 369
BstHHI GCGC 2 cut(s) 368, 1444
BstKTI GATC 3 cut(s) 712, 963, 1495
BstMAI GTCTC 4 cut(s) 20, 68, 1049, 1777
BstMBI GATC 3 cut(s) 709, 960, 1492
BstMWI GCNNNNNNNGC 3 cut(s) 331, 355, 374
BstNI CCWGG 1 cut(s) 1579
BstNSI RCATGY 2 cut(s) 533, 1240
BstSCI CCNGG 1 cut(s) 1577
BstUI CGCG 1 cut(s) 301
BstV1I GCAGC 2 cut(s) 174, 965
BsuRI GGCC 3 cut(s) 65, 154, 1593
BtsCI GGATG 2 cut(s) 268, 398
BtsI GCAGTG 1 cut(s) 736
BtsIMutI CAGTG 2 cut(s) 493, 736
BtuMI TCGCGA 1 cut(s) 301
Cac8I GCNNGC 7 cut(s) 84, 238, 299, 327, 698, 776, 930
CfoI GCGC 2 cut(s) 368, 1444
Cfr13I GGNCC 1 cut(s) 1591
CseI GACGC 1 cut(s) 289
Csp6I GTAC 2 cut(s) 851, 905
CviAII CATG 6 cut(s) 530, 1237, 1307, 1376, 1534, 1715
CviQI GTAC 2 cut(s) 851, 905
DdeI CTNAG 6 cut(s) 144, 378, 492, 725, 819, 1613
DinI GGCGCC 1 cut(s) 367
DpnI GATC 3 cut(s) 711, 962, 1494
DpnII GATC 3 cut(s) 709, 960, 1492
DraI TTTAAA 3 cut(s) 658, 1254, 1644
EaeI YGGCCR 1 cut(s) 63
Eam1104I CTCTTC 1 cut(s) 1018
EarI CTCTTC 1 cut(s) 1018
Eco24I GRGCYC 1 cut(s) 265
Eco31I GGTCTC 1 cut(s) 1777
Eco57I CTGAAG 1 cut(s) 1113
EcoO109I RGGNCCY 1 cut(s) 1591
EcoRI GAATTC 3 cut(s) 893, 1705, 1742
EcoRII CCWGG 1 cut(s) 1577
EcoT22I ATGCAT 1 cut(s) 1377
EcoT38I GRGCYC 1 cut(s) 265
EgeI GGCGCC 1 cut(s) 367
EheI GGCGCC 1 cut(s) 367
Esp3I CGTCTC 1 cut(s) 68
FaeI CATG 6 cut(s) 533, 1240, 1310, 1379, 1537, 1718
FatI CATG 6 cut(s) 529, 1236, 1306, 1375, 1533, 1714
FauI CCCGC 1 cut(s) 28
FbaI TGATCA 2 cut(s) 709, 1492
Fnu4HI GCNGC 5 cut(s) 33, 155, 188, 347, 954
FokI GGATG 2 cut(s) 255, 385
FriOI GRGCYC 1 cut(s) 265
Fsp4HI GCNGC 5 cut(s) 33, 155, 188, 347, 954
FspAI RTGCGCAY 1 cut(s) 1443
FspBI CTAG 1 cut(s) 326
FspI TGCGCA 1 cut(s) 1443
GlaI GCGC 2 cut(s) 367, 1443
GluI GCNGC 5 cut(s) 33, 155, 188, 347, 954
HaeII RGCGCY 1 cut(s) 369
HaeIII GGCC 3 cut(s) 65, 154, 1593
HgaI GACGC 1 cut(s) 289
HhaI GCGC 2 cut(s) 368, 1444
Hin1I GRCGYC 2 cut(s) 281, 366
Hin1II CATG 6 cut(s) 533, 1240, 1310, 1379, 1537, 1718
Hin6I GCGC 2 cut(s) 366, 1442
HinP1I GCGC 2 cut(s) 366, 1442
HincII GTYRAC 1 cut(s) 862
HindII GTYRAC 1 cut(s) 862
HindIII AAGCTT 5 cut(s) 5, 561, 722, 772, 1681
HinfI GANTC 4 cut(s) 303, 839, 1520, 1688
HphI GGTGA 6 cut(s) 223, 1022, 1403, 1529, 1681, 1753
Hpy166II GTNNAC 3 cut(s) 47, 231, 862
Hpy188I TCNGA 6 cut(s) 100, 279, 637, 646, 742, 1077
Hpy188III TCNNGA 6 cut(s) 44, 300, 427, 887, 1496, 1529
Hpy8I GTNNAC 3 cut(s) 47, 231, 862
HpyAV CCTTC 2 cut(s) 406, 1418
HpyCH4III ACNGT 6 cut(s) 219, 228, 436, 859, 914, 1765
HpyCH4IV ACGT 1 cut(s) 706
HpyF10VI GCNNNNNNNGC 3 cut(s) 331, 355, 374
HpyF3I CTNAG 6 cut(s) 144, 378, 492, 725, 819, 1613
HpySE526I ACGT 1 cut(s) 706
Hsp92I GRCGYC 2 cut(s) 281, 366
Hsp92II CATG 6 cut(s) 533, 1240, 1310, 1379, 1537, 1718
HspAI GCGC 2 cut(s) 366, 1442
KasI GGCGCC 1 cut(s) 365
Ksp22I TGATCA 2 cut(s) 709, 1492
Kzo9I GATC 3 cut(s) 709, 960, 1492
LmnI GCTCC 4 cut(s) 79, 133, 268, 526
Lsp1109I GCAGC 2 cut(s) 174, 965
LweI GCATC 5 cut(s) 407, 739, 805, 1324, 1429
MaeI CTAG 1 cut(s) 326
MaeII ACGT 1 cut(s) 706
MaeIII GTNAC 3 cut(s) 1257, 1537, 1669
MalI GATC 3 cut(s) 711, 962, 1494
MboI GATC 3 cut(s) 709, 960, 1492
MboII GAAGA 4 cut(s) 1035, 1090, 1563, 1566
MfeI CAATTG 2 cut(s) 758, 1626
MhlI GDGCHC 1 cut(s) 265
Mly113I GGCGCC 1 cut(s) 366
MlyI GAGTC 2 cut(s) 297, 1697
MmeI TCCRAC 2 cut(s) 111, 234
Mph1103I ATGCAT 1 cut(s) 1377
MslI CAYNNNNRTG 4 cut(s) 645, 680, 705, 1309
MspA1I CMGCKG 1 cut(s) 32
MspR9I CCNGG 1 cut(s) 1579
MunI CAATTG 2 cut(s) 758, 1626
Mva1269I GAATGC 1 cut(s) 604
MvaI CCWGG 1 cut(s) 1579
MvnI CGCG 1 cut(s) 301
MwoI GCNNNNNNNGC 3 cut(s) 331, 355, 374
NarI GGCGCC 1 cut(s) 366
NdeII GATC 3 cut(s) 709, 960, 1492
NheI GCTAGC 1 cut(s) 325
NlaIII CATG 6 cut(s) 533, 1240, 1310, 1379, 1537, 1718
NlaIV GGNNCC 3 cut(s) 264, 367, 1421
NmuCI GTSAC 1 cut(s) 1669
NruI TCGCGA 1 cut(s) 301
NsbI TGCGCA 1 cut(s) 1443
NsiI ATGCAT 1 cut(s) 1377
NspI RCATGY 2 cut(s) 533, 1240
NspV TTCGAA 1 cut(s) 206
OliI CACNNNNGTG 2 cut(s) 705, 1309
PcsI WCGNNNNNNNCGW 1 cut(s) 191
PctI GAATGC 1 cut(s) 604
PfeI GAWTC 2 cut(s) 839, 1520
PfoI TCCNGGA 1 cut(s) 1577
PkrI GCNGC 5 cut(s) 34, 156, 189, 348, 955
PleI GAGTC 2 cut(s) 297, 1696
PluTI GGCGCC 1 cut(s) 369
PpsI GAGTC 2 cut(s) 297, 1696
PsiI TTATAA 1 cut(s) 720
Psp6I CCWGG 1 cut(s) 1577
PspGI CCWGG 1 cut(s) 1577
PspN4I GGNNCC 3 cut(s) 264, 367, 1421
PspPI GGNCC 1 cut(s) 1591
RruI TCGCGA 1 cut(s) 301
RsaI GTAC 2 cut(s) 852, 906
RsaNI GTAC 2 cut(s) 851, 905
RseI CAYNNNNRTG 4 cut(s) 645, 680, 705, 1309
SatI GCNGC 5 cut(s) 33, 155, 188, 347, 954
Sau3AI GATC 3 cut(s) 709, 960, 1492
Sau96I GGNCC 1 cut(s) 1591
SchI GAGTC 2 cut(s) 297, 1697
ScrFI CCNGG 1 cut(s) 1579
SduI GDGCHC 1 cut(s) 265
SfaNI GCATC 5 cut(s) 407, 739, 805, 1324, 1429
SfoI GGCGCC 1 cut(s) 367
SfuI TTCGAA 1 cut(s) 206
SmiI ATTTAAAT 1 cut(s) 658
SmiMI CAYNNNNRTG 4 cut(s) 645, 680, 705, 1309
SmlI CTYRAG 3 cut(s) 476, 887, 1780
SmoI CTYRAG 3 cut(s) 476, 887, 1780
SsiI CCGC 6 cut(s) 32, 35, 155, 234, 323, 347
SspDI GGCGCC 1 cut(s) 365
SspMI CTAG 1 cut(s) 326
StyD4I CCNGG 1 cut(s) 1577
SwaI ATTTAAAT 1 cut(s) 658
TaaI ACNGT 6 cut(s) 219, 228, 436, 859, 914, 1765
TaiI ACGT 1 cut(s) 709
TaqI TCGA 4 cut(s) 15, 206, 410, 426
TauI GCSGC 3 cut(s) 35, 157, 349
TfiI GAWTC 2 cut(s) 839, 1520
TscAI CASTG 2 cut(s) 493, 736
TseFI GTSAC 1 cut(s) 1669
TseI GCWGC 2 cut(s) 187, 953
Tsp45I GTSAC 1 cut(s) 1669
TspDTI ATGAA 6 cut(s) 17, 603, 698, 1265, 1404, 1720
TspGWI ACGGA 3 cut(s) 86, 92, 183
TspRI CASTG 2 cut(s) 493, 736
XapI RAATTY 8 cut(s) 653, 686, 743, 893, 1249, 1705, 1742, 1757
XceI RCATGY 2 cut(s) 533, 1240
XspI CTAG 1 cut(s) 326
Zsp2I ATGCAT 1 cut(s) 1377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.