FvH4_3g45511

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000990
Physical Location & Seq
Reverse (-)
37728661 .. 37735034
6374 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g45511.t2

Sequence Viewer

Length: 3093 bp
ATGGCTAGATGGGATGAGATTCTGTCTCTTCCTGTGCAGAATCCTCCGACTTTGGAGTTTTGTGCTGCTGATCTTGTGTGGTCCAAGGTCGAAGGCTGGTGCGACAAGAAAGATCGAGTTGCTGTGATCCCCTTTGCCAGAGTTGATGATTTTGTCAGGGGTGAATCCGCCAACAAAGAGTGTCCAACGAAATTTCATGTTGAAGCGAGGCGGAAGCGGCACGCAAAGGCTAATTTCAAACCAAAGGTTGATGGAATCCTTGAATATATTCTATATTGGTGCTCCTTTGGTCCTGATGATCACAGGGCGGGTGGCTCTAGACGACCCAGTAGGACTCATTTTGCCCCAAAGAAGAAAAATTCCGGTAGACCAAACACCAAGAGAGGTTGTACCTGCCACTTTATAGTGAAACGCTTAATTGCTGAACCCTCAGTAGCGCTTCTTGTATATAATTCTTTTAAGCATGTGGATAAGAAAGGATTGCCATGCCATGGCCCAGAAGACAAGATGGCAGCTGGAACGCGCGCTATGTTTGCCCCACACATCTCTGAGGATCTACGCCTTCGTGTGTTATCTTTGCTATATGTGGGGGTCTCTGTGGAGACCATAATGCAGAGACACTCTGAATCCGTAGAAAGACAAGGTGGTCCATGTAATCGTGATGACCTCTTAACCCATAGGTCTGTTCGCAGTCAGGAGAGGAACATTCGACGTTCTACATATGAATTGGATTCCGATGACGCAGTTAGCATCAGCTTGTGGGTGGAAACCCATCAAAGTAGTATTTTCTTCTATGAGGATTTCTCTGAGACGGACCCTTTCACTTTGGGCATTCAAACAGATTGGCAGTTGCAGCAGATGATTCGCTTTGGCAATTACAGCCTAATAGCCTCTGATTCAAGATTCGGAACAAACAAATTAAAGTATCCGGTTCATAGTCTCCTTGTATTTAACCAAGACAACAAGGCCATTCCGGTAGCATGGATAGTGAATCCAAAATCTGCAAGTTCTGATACCTATAAATGGATGAGAGCTCTTTACAATAGAGTTCAAGCGAAAGATCCTTCATGGAAGTTGGCTGGGTTCATAGTGGATGATCCTCAGGCTGATGTACTCACTATCAGGGATGTATTTCACTGCTCAGTGCTGATAAGCTTTTGGCGGGTTCGTCATGCATGGCATAAAAACTTGGTAAGGAAATGTTCAGAGGAGGAGATGCGAGCTACAATAGCAAGAAGGCTACATCAGGCAGTGGATATCATATGTCAACGACGAGGAACTGATGGTTTGTTTGTGGATTTCATGGAAGATTTTGTTGATGCGTCAGATTTTGTGGATTATTTTAAGGCAACATGGTATCCTAGAATAGGGAAGTGGACTACTGCATTACAAAGTCTTCCTCTCGCTAGCCAGGAAACATGTGCAGCAATGGAGTTCTTCCACAACCAGCTGAAGCTGAGGTTATTAAATGAGAAGAAACCCAGTGTCTACAATAGAGTTGATTGGCTGGTTCATAAGCTGGGTACCCAAGTGCATTCCTATTTCTGGCTTGATGAATACTCTGAGAAGGATGACTTTGCACGATACTGGAAAGATGAGTGGGTGAGCGGTTTAACATCTTGGCGAACAGCTTTGGAGATTCCAGACTCTAATGTTGTTATTGAAGGTACATGTGCAAAAGTTACAGACCAGCTTGACAATGAAAAGACTTATGTTGTTTGGAACCCTGGTTCACAATTCGGCATTTGCAACTGCAGTTGGGCAGAAATGGGGAACCTGTGCGAGCATATACTCAAGGTTATTAGTGTCTGCAGGAAAAGAAGTCATCCCATGCCATCTGTCAACTTATTGCAGTTCCACCAGGCCTTGCTTGATATGCTCCATATGCCACCTCATGATTCTTTAATTCGTGATCACGCTGTTTCTTTAGCGGCCTTTGTACATAACCAGTTAAGCGGACCTAATTCGGAAAGCAGCAATAGCACTATGGTGACAGCTTTAGCCGATAAAGATCAAGTATTAATAGATGAGGGTCCAGCAAGTGAAGAGGCACATAATGAGAATAGTTGTGTGGATGAGCATGTTGTTGTGACTACTGAAACGAGGAGTCCGTTTGCATGTGGAAATGGCATATATAATGAGGGCTGTGGAGAAGAAAATACTTCTGAGATGGATGTTGACCCATCATCCATCTGTATTTCTCCACCTGGATTACATTCTGTTGATGAGGTTGTGTCTAGTGGTGTCCTCTCAGGAAGCAGTCAGAGGCCCTTGGTTAACACAGAAACTGAAGAGCTGCTTTCAGCGGATGATGCTCTCTCTAATTCAAGTGAAAATGAGGATGATATGTTAGATGAAAATTGCAAAGAAAATGTATTGAATACAGATCCGCTTTCCCTTGATATCCCATGTTCAACTATGGAGTTTGTGGAGCAATGCACAGTACGCCATCCGAATGATCTCCACAGCCATGATGTCAATTCTGCCGTTATTTCGAGAGTATGTGATGACAATACAGTATATAACAATACCTCTCCATCTTCATGTGTGCCTGTTGAACCACAAGCTTCAGATGTCAAAGAAAATGAGAGCATGGAAATTGAAACTGAAAACAGAATAGACTTGGTGGAGCATAGTGCAGTTACCTATCCTAATGGTAACCACAGCCATGAAATCGGTATTGAGCCTGCTGTTATTTCCAAAAGATCTCCTAACAACACTGTTTATGAGAAGACCTCTGCTTCTGCATCTATGCCTGTTGAATTACCAATTGTTGAAGTGGCTGAAACTTCAGATATCAATTTAGAAAATGATACAATGGAAATTGAAAGTGAGAACGGAAGCACAAGTAATCAGAAACTGTCTGCTGATGATCCTTCCACATTGGACGGGGTTCGTGGTTGTATGATAAATGGTTCAGATTGTAGTCAGGATTCAAAATCAGTTGGCAATGTGATGGTTGTGTACTCAGAACCCTTGCTCAAGTTCTCATCTACATCAAGTTGCAACAAGGAAGAGCTGCCTGTTGAGAATGGGGCTACTGAAACTGGATCTGCTGAGAAGCCATCTTCAATCACTGAATTTCATCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1031

Amino Acids

115.65

Weight (kDa)

5.17

Isoelectric Point (pI)

43.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 645
Acc36I ACCTGC 1 cut(s) 401
Acc65I GGTACC 1 cut(s) 1523
AccB1I GGYRCC 1 cut(s) 1523
AccB7I CCANNNNNTGG 1 cut(s) 491
AccBSI CCGCTC 1 cut(s) 1608
AccI GTMKAC 2 cut(s) 367, 1488
AccII CGCG 2 cut(s) 523, 525
AclWI GGATC 7 cut(s) 121, 561, 1055, 1091, 2381, 2867, 3058
AcsI RAATTY 3 cut(s) 191, 358, 3080
AcuI CTGAAG 4 cut(s) 1472, 2310, 2553, 2775
AfaI GTAC 7 cut(s) 391, 1113, 1525, 1669, 1941, 2445, 2966
AfeI AGCGCT 1 cut(s) 438
AfiI CCNNNNNNNGG 4 cut(s) 491, 1023, 1367, 1545
AflIII ACRYGT 2 cut(s) 1418, 1670
AjnI CCWGG 4 cut(s) 1410, 1726, 1860, 2206
AleI CACNNNNGTG 1 cut(s) 1988
AloI GAACNNNNNNTCC 2 cut(s) 1714, 1746
Alw21I GWGCWC 2 cut(s) 284, 1036
Alw26I GTCTC 6 cut(s) 30, 596, 598, 610, 803, 944
AlwI GGATC 7 cut(s) 121, 561, 1055, 1091, 2381, 2867, 3058
AlwNI CAGNNNCTG 2 cut(s) 2288, 2860
Aor51HI AGCGCT 1 cut(s) 438
AoxI GGCC 5 cut(s) 493, 966, 1863, 1932, 2267
ApeKI GCWGC 7 cut(s) 65, 512, 853, 1424, 1974, 2296, 3019
ApoI RAATTY 3 cut(s) 191, 358, 3080
AseI ATTAAT 1 cut(s) 2021
Asp700I GAANNNNTTC 1 cut(s) 267
Asp718I GGTACC 1 cut(s) 1523
AspLEI GCGC 3 cut(s) 439, 525, 527
AspS9I GGNCC 8 cut(s) 81, 290, 494, 647, 814, 1958, 2033, 2268
AsuHPI GGTGA 3 cut(s) 173, 1615, 2002
AsuNHI GCTAGC 1 cut(s) 1406
AvaII GGWCC 6 cut(s) 81, 290, 647, 814, 1958, 2033
AxyI CCTNAGG 1 cut(s) 1101
BaeI ACNNNNGTAYC 2 cut(s) 1515, 1548
BanI GGYRCC 1 cut(s) 1523
BanII GRGCYC 1 cut(s) 1036
BbsI GAAGAC 3 cut(s) 507, 1388, 2738
Bbv12I GWGCWC 2 cut(s) 284, 1036
BbvCI CCTCAGC 1 cut(s) 1457
BbvI GCAGC 7 cut(s) 52, 524, 865, 1436, 1986, 2283, 3006
BceAI ACGGC 1 cut(s) 2471
BcgI CGANNNNNNTGC 2 cut(s) 845, 879
BciT130I CCWGG 4 cut(s) 1412, 1728, 1862, 2208
BciVI GTATCC 2 cut(s) 936, 1368
BclI TGATCA 2 cut(s) 298, 1912
BcoDI GTCTC 6 cut(s) 30, 596, 598, 610, 803, 944
BfaI CTAG 5 cut(s) 6, 318, 1362, 1407, 2238
BfmI CTRYAG 2 cut(s) 1753, 1810
BfoI RGCGCY 1 cut(s) 440
BfuAI ACCTGC 1 cut(s) 401
BfuI GTATCC 2 cut(s) 936, 1368
BglII AGATCT 1 cut(s) 2705
BisI GCNGC 9 cut(s) 66, 218, 513, 854, 1425, 1932, 1975, 2297, 3020
BlsI GCNGC 9 cut(s) 67, 219, 514, 855, 1426, 1933, 1976, 2298, 3021
Bme1390I CCNGG 4 cut(s) 1412, 1728, 1862, 2208
Bme18I GGWCC 6 cut(s) 81, 290, 647, 814, 1958, 2033
BmgT120I GGNCC 8 cut(s) 81, 290, 494, 647, 814, 1958, 2033, 2268
BmiI GGNNCC 5 cut(s) 816, 1525, 1724, 1775, 2034
BmrFI CCNGG 4 cut(s) 1412, 1728, 1862, 2208
BmrI ACTGGG 2 cut(s) 321, 1476
BmsI GCATC 5 cut(s) 759, 1206, 1309, 2302, 2756
BmtI GCTAGC 1 cut(s) 1410
BmuI ACTGGG 2 cut(s) 321, 1476
BpiI GAAGAC 3 cut(s) 507, 1388, 2738
BplI GAGNNNNNCTC 4 cut(s) 788, 820, 2720, 2752
Bpu10I CCTNAGC 1 cut(s) 1457
BpuEI CTTGAG 2 cut(s) 1778, 2966
BsaBI GATNNNNATC 1 cut(s) 2010
BsaI GGTCTC 2 cut(s) 596, 598
BsaJI CCNNGG 4 cut(s) 84, 490, 1726, 2271
BsaWI WCCGGW 3 cut(s) 362, 928, 973
Bsc4I CCNNNNNNNGG 4 cut(s) 491, 1023, 1367, 1545
Bse1I ACTGG 5 cut(s) 327, 1482, 1592, 1948, 3052
Bse21I CCTNAGG 1 cut(s) 1101
Bse3DI GCAATG 3 cut(s) 1434, 2441, 2956
Bse8I GATNNNNATC 1 cut(s) 2010
BseBI CCWGG 4 cut(s) 1412, 1728, 1862, 2208
BseDI CCNNGG 4 cut(s) 84, 490, 1726, 2271
BseJI GATNNNNATC 1 cut(s) 2010
BseLI CCNNNNNNNGG 4 cut(s) 491, 1023, 1367, 1545
BseMI GCAATG 3 cut(s) 1434, 2441, 2956
BseNI ACTGG 5 cut(s) 327, 1482, 1592, 1948, 3052
BsePI GCGCGC 1 cut(s) 523
BseRI GAGGAG 3 cut(s) 1223, 1226, 2119
BseXI GCAGC 7 cut(s) 52, 524, 865, 1436, 1986, 2283, 3006
BseYI CCCAGC 2 cut(s) 1079, 1519
BsgI GTGCAG 3 cut(s) 56, 1443, 2658
Bsh1236I CGCG 2 cut(s) 523, 525
BshFI GGCC 5 cut(s) 495, 968, 1865, 1934, 2269
BshNI GGYRCC 1 cut(s) 1523
BsiHKAI GWGCWC 2 cut(s) 284, 1036
BsiSI CCGG 3 cut(s) 363, 929, 974
BslI CCNNNNNNNGG 4 cut(s) 491, 1023, 1367, 1545
BsmAI GTCTC 6 cut(s) 30, 596, 598, 610, 803, 944
BsmBI CGTCTC 1 cut(s) 803
BsmI GAATGC 2 cut(s) 831, 1534
BsnI GGCC 5 cut(s) 495, 968, 1865, 1934, 2269
Bso31I GGTCTC 2 cut(s) 596, 598
Bsp1286I GDGCHC 2 cut(s) 284, 1036
Bsp1407I TGTACA 1 cut(s) 1939
Bsp19I CCATGG 1 cut(s) 490
BspANI GGCC 5 cut(s) 495, 968, 1865, 1934, 2269
BspFNI CGCG 2 cut(s) 523, 525
BspHI TCATGA 1 cut(s) 1894
BspLI GGNNCC 5 cut(s) 816, 1525, 1724, 1775, 2034
BspMAI CTGCAG 2 cut(s) 1757, 1814
BspMI ACCTGC 1 cut(s) 401
BspOI GCTAGC 1 cut(s) 1410
BspPI GGATC 7 cut(s) 121, 561, 1055, 1091, 2381, 2867, 3058
BspQI GCTCTTC 2 cut(s) 2286, 3009
BspT107I GGYRCC 1 cut(s) 1523
BspTNI GGTCTC 2 cut(s) 596, 598
BsrBI CCGCTC 1 cut(s) 1608
BsrDI GCAATG 3 cut(s) 1434, 2441, 2956
BsrGI TGTACA 1 cut(s) 1939
BsrI ACTGG 5 cut(s) 327, 1482, 1592, 1948, 3052
BssECI CCNNGG 4 cut(s) 84, 490, 1726, 2271
BssHII GCGCGC 1 cut(s) 523
BssT1I CCWWGG 3 cut(s) 84, 490, 2271
Bst2UI CCWGG 4 cut(s) 1412, 1728, 1862, 2208
Bst4CI ACNGT 4 cut(s) 2443, 2518, 2722, 2862
Bst6I CTCTTC 4 cut(s) 33, 2040, 2286, 3009
BstAUI TGTACA 1 cut(s) 1939
BstC8I GCNNGC 6 cut(s) 222, 525, 1221, 1408, 1784, 2688
BstDSI CCRYGG 1 cut(s) 490
BstEII GGTNACC 1 cut(s) 2657
BstENI CCTNNNNNAGG 1 cut(s) 1365
BstFNI CGCG 2 cut(s) 523, 525
BstH2I RGCGCY 1 cut(s) 440
BstHHI GCGC 3 cut(s) 439, 525, 527
BstMAI GTCTC 6 cut(s) 30, 596, 598, 610, 803, 944
BstNI CCWGG 4 cut(s) 1412, 1728, 1862, 2208
BstNSI RCATGY 5 cut(s) 467, 1422, 1674, 2084, 2121
BstPI GGTNACC 1 cut(s) 2657
BstSCI CCNGG 4 cut(s) 1410, 1726, 1860, 2206
BstSFI CTRYAG 2 cut(s) 1753, 1810
BstUI CGCG 2 cut(s) 523, 525
BstV1I GCAGC 7 cut(s) 52, 524, 865, 1436, 1986, 2283, 3006
BstV2I GAAGAC 3 cut(s) 507, 1388, 2738
BstX2I RGATCY 5 cut(s) 553, 1060, 2386, 2705, 3050
BstYI RGATCY 5 cut(s) 553, 1060, 2386, 2705, 3050
Bsu36I CCTNAGG 1 cut(s) 1101
BsuI GTATCC 2 cut(s) 936, 1368
BsuRI GGCC 5 cut(s) 495, 968, 1865, 1934, 2269
BtgI CCRYGG 1 cut(s) 490
BtsI GCAGTG 2 cut(s) 1135, 1257
BtsIMutI CAGTG 6 cut(s) 1135, 1149, 1257, 1489, 2718, 3075
BveI ACCTGC 1 cut(s) 401
Cac8I GCNNGC 6 cut(s) 222, 525, 1221, 1408, 1784, 2688
CaiI CAGNNNCTG 2 cut(s) 2288, 2860
CciI TCATGA 1 cut(s) 1894
CfoI GCGC 3 cut(s) 439, 525, 527
Cfr13I GGNCC 8 cut(s) 81, 290, 494, 647, 814, 1958, 2033, 2268
CseI GACGC 2 cut(s) 749, 1311
Csp6I GTAC 7 cut(s) 390, 1112, 1524, 1668, 1940, 2444, 2965
CviQI GTAC 7 cut(s) 390, 1112, 1524, 1668, 1940, 2444, 2965
DrdI GACNNNNNNGTC 1 cut(s) 645
DseDI GACNNNNNNGTC 1 cut(s) 645
Eam1104I CTCTTC 4 cut(s) 33, 2040, 2286, 3009
EarI CTCTTC 4 cut(s) 33, 2040, 2286, 3009
EciI GGCGGA 2 cut(s) 157, 226
Ecl136II GAGCTC 1 cut(s) 1034
Eco130I CCWWGG 3 cut(s) 84, 490, 2271
Eco147I AGGCCT 1 cut(s) 1865
Eco24I GRGCYC 1 cut(s) 1036
Eco31I GGTCTC 2 cut(s) 596, 598
Eco32I GATATC 3 cut(s) 1258, 2404, 2797
Eco47I GGWCC 6 cut(s) 81, 290, 647, 814, 1958, 2033
Eco47III AGCGCT 1 cut(s) 438
Eco53kI GAGCTC 1 cut(s) 1034
Eco57I CTGAAG 4 cut(s) 1472, 2310, 2553, 2775
Eco81I CCTNAGG 1 cut(s) 1101
Eco91I GGTNACC 1 cut(s) 2657
EcoICRI GAGCTC 1 cut(s) 1034
EcoNI CCTNNNNNAGG 1 cut(s) 1365
EcoO109I RGGNCCY 1 cut(s) 2268
EcoO65I GGTNACC 1 cut(s) 2657
EcoRII CCWGG 4 cut(s) 1410, 1726, 1860, 2206
EcoRV GATATC 3 cut(s) 1258, 2404, 2797
EcoT14I CCWWGG 3 cut(s) 84, 490, 2271
EcoT22I ATGCAT 1 cut(s) 1177
EcoT38I GRGCYC 1 cut(s) 1036
ErhI CCWWGG 3 cut(s) 84, 490, 2271
Esp3I CGTCTC 1 cut(s) 803
FalI AAGNNNNNCTT 4 cut(s) 1559, 1591, 2283, 2315
FauI CCCGC 2 cut(s) 301, 1155
FauNDI CATATG 3 cut(s) 721, 1262, 1884
FbaI TGATCA 2 cut(s) 298, 1912
FblI GTMKAC 2 cut(s) 367, 1488
Fnu4HI GCNGC 9 cut(s) 66, 218, 513, 854, 1425, 1932, 1975, 2297, 3020
FriOI GRGCYC 1 cut(s) 1036
Fsp4HI GCNGC 9 cut(s) 66, 218, 513, 854, 1425, 1932, 1975, 2297, 3020
FspBI CTAG 5 cut(s) 6, 318, 1362, 1407, 2238
GlaI GCGC 3 cut(s) 438, 524, 526
GluI GCNGC 9 cut(s) 66, 218, 513, 854, 1425, 1932, 1975, 2297, 3020
GsaI CCCAGC 2 cut(s) 1083, 1523
HaeII RGCGCY 1 cut(s) 440
HaeIII GGCC 5 cut(s) 495, 968, 1865, 1934, 2269
HapII CCGG 3 cut(s) 363, 929, 974
HgaI GACGC 2 cut(s) 749, 1311
HhaI GCGC 3 cut(s) 439, 525, 527
Hin6I GCGC 3 cut(s) 437, 523, 525
HinP1I GCGC 3 cut(s) 437, 523, 525
HincII GTYRAC 4 cut(s) 1268, 1843, 2179, 2278
HindII GTYRAC 4 cut(s) 1268, 1843, 2179, 2278
HindIII AAGCTT 2 cut(s) 1153, 2565
HpaI GTTAAC 1 cut(s) 2278
HpaII CCGG 3 cut(s) 363, 929, 974
HphI GGTGA 3 cut(s) 173, 1615, 2002
Hpy166II GTNNAC 9 cut(s) 368, 1268, 1377, 1489, 1733, 1843, 2179, 2278, 2965
Hpy8I GTNNAC 9 cut(s) 368, 1268, 1377, 1489, 1733, 1843, 2179, 2278, 2965
Hpy99I CGWCG 2 cut(s) 714, 1275
HpyAV CCTTC 7 cut(s) 86, 572, 1074, 1230, 1561, 1658, 2886
HpyCH4III ACNGT 4 cut(s) 2443, 2518, 2722, 2862
HpyCH4IV ACGT 1 cut(s) 712
HpySE526I ACGT 1 cut(s) 712
HspAI GCGC 3 cut(s) 437, 523, 525
KpnI GGTACC 1 cut(s) 1527
Ksp22I TGATCA 2 cut(s) 298, 1912
KspAI GTTAAC 1 cut(s) 2278
LguI GCTCTTC 2 cut(s) 2286, 3009
LmnI GCTCC 4 cut(s) 287, 1884, 2431, 2629
Lsp1109I GCAGC 7 cut(s) 52, 524, 865, 1436, 1986, 2283, 3006
LweI GCATC 5 cut(s) 759, 1206, 1309, 2302, 2756
MaeI CTAG 5 cut(s) 6, 318, 1362, 1407, 2238
MaeII ACGT 1 cut(s) 712
MaeIII GTNAC 5 cut(s) 1681, 1990, 2089, 2641, 2657
MbiI CCGCTC 1 cut(s) 1608
MfeI CAATTG 1 cut(s) 2769
MflI RGATCY 5 cut(s) 553, 1060, 2386, 2705, 3050
MhlI GDGCHC 2 cut(s) 284, 1036
MlyI GAGTC 3 cut(s) 328, 1640, 2116
MmeI TCCRAC 2 cut(s) 71, 209
Mph1103I ATGCAT 1 cut(s) 1177
MroXI GAANNNNTTC 1 cut(s) 267
MslI CAYNNNNRTG 5 cut(s) 1988, 2454, 2469, 2542, 2667
MspA1I CMGCKG 3 cut(s) 515, 1450, 2306
MspI CCGG 3 cut(s) 363, 929, 974
MspR9I CCNGG 4 cut(s) 1412, 1728, 1862, 2208
MunI CAATTG 1 cut(s) 2769
Mva1269I GAATGC 2 cut(s) 831, 1534
MvaI CCWGG 4 cut(s) 1412, 1728, 1862, 2208
MvnI CGCG 2 cut(s) 523, 525
NcoI CCATGG 1 cut(s) 490
NdeI CATATG 3 cut(s) 721, 1262, 1884
NheI GCTAGC 1 cut(s) 1406
NlaIV GGNNCC 5 cut(s) 816, 1525, 1724, 1775, 2034
NmuCI GTSAC 2 cut(s) 1990, 2089
NsiI ATGCAT 1 cut(s) 1177
NspI RCATGY 5 cut(s) 467, 1422, 1674, 2084, 2121
OliI CACNNNNGTG 1 cut(s) 1988
PagI TCATGA 1 cut(s) 1894
PauI GCGCGC 1 cut(s) 523
PceI AGGCCT 1 cut(s) 1865
PciI ACATGT 2 cut(s) 1418, 1670
PciSI GCTCTTC 2 cut(s) 2286, 3009
PcsI WCGNNNNNNNCGW 1 cut(s) 2108
PctI GAATGC 2 cut(s) 831, 1534
PdmI GAANNNNTTC 1 cut(s) 267
PflMI CCANNNNNTGG 1 cut(s) 491
PkrI GCNGC 9 cut(s) 67, 219, 514, 855, 1426, 1933, 1976, 2298, 3021
PleI GAGTC 3 cut(s) 328, 1640, 2115
PpsI GAGTC 3 cut(s) 328, 1640, 2115
PscI ACATGT 2 cut(s) 1418, 1670
PshBI ATTAAT 1 cut(s) 2021
Psp124BI GAGCTC 1 cut(s) 1036
Psp6I CCWGG 4 cut(s) 1410, 1726, 1860, 2206
PspEI GGTNACC 1 cut(s) 2657
PspFI CCCAGC 2 cut(s) 1079, 1519
PspGI CCWGG 4 cut(s) 1410, 1726, 1860, 2206
PspN4I GGNNCC 5 cut(s) 816, 1525, 1724, 1775, 2034
PspPI GGNCC 8 cut(s) 81, 290, 494, 647, 814, 1958, 2033, 2268
PstI CTGCAG 2 cut(s) 1757, 1814
PstNI CAGNNNCTG 2 cut(s) 2288, 2860
PsuI RGATCY 5 cut(s) 553, 1060, 2386, 2705, 3050
PteI GCGCGC 1 cut(s) 523
PvuII CAGCTG 2 cut(s) 515, 1450
RsaI GTAC 7 cut(s) 391, 1113, 1525, 1669, 1941, 2445, 2966
RsaNI GTAC 7 cut(s) 390, 1112, 1524, 1668, 1940, 2444, 2965
RseI CAYNNNNRTG 5 cut(s) 1988, 2454, 2469, 2542, 2667
SacI GAGCTC 1 cut(s) 1036
SapI GCTCTTC 2 cut(s) 2286, 3009
SatI GCNGC 9 cut(s) 66, 218, 513, 854, 1425, 1932, 1975, 2297, 3020
Sau96I GGNCC 8 cut(s) 81, 290, 494, 647, 814, 1958, 2033, 2268
SchI GAGTC 3 cut(s) 328, 1640, 2116
ScrFI CCNGG 4 cut(s) 1412, 1728, 1862, 2208
SduI GDGCHC 2 cut(s) 284, 1036
SfaNI GCATC 5 cut(s) 759, 1206, 1309, 2302, 2756
SfcI CTRYAG 2 cut(s) 1753, 1810
SinI GGWCC 6 cut(s) 81, 290, 647, 814, 1958, 2033
SmiMI CAYNNNNRTG 5 cut(s) 1988, 2454, 2469, 2542, 2667
SmlI CTYRAG 2 cut(s) 1793, 2981
SmoI CTYRAG 2 cut(s) 1793, 2981
SseBI AGGCCT 1 cut(s) 1865
SspMI CTAG 5 cut(s) 6, 318, 1362, 1407, 2238
SstI GAGCTC 1 cut(s) 1036
StuI AGGCCT 1 cut(s) 1865
StyD4I CCNGG 4 cut(s) 1410, 1726, 1860, 2206
StyI CCWWGG 3 cut(s) 84, 490, 2271
TaaI ACNGT 4 cut(s) 2443, 2518, 2722, 2862
TaiI ACGT 1 cut(s) 715
TaqI TCGA 4 cut(s) 90, 115, 709, 2495
TatI WGTACW 3 cut(s) 1111, 1939, 2964
TauI GCSGC 2 cut(s) 220, 1934
TscAI CASTG 6 cut(s) 1142, 1149, 1257, 1489, 2725, 3082
TseFI GTSAC 2 cut(s) 1990, 2089
TseI GCWGC 7 cut(s) 65, 512, 853, 1424, 1974, 2296, 3019
Tsp45I GTSAC 2 cut(s) 1990, 2089
TspGWI ACGGA 4 cut(s) 619, 827, 2100, 2853
TspRI CASTG 6 cut(s) 1142, 1149, 1257, 1489, 2725, 3082
Van91I CCANNNNNTGG 1 cut(s) 491
VpaK11BI GGWCC 6 cut(s) 81, 290, 647, 814, 1958, 2033
VspI ATTAAT 1 cut(s) 2021
XagI CCTNNNNNAGG 1 cut(s) 1365
XapI RAATTY 3 cut(s) 191, 358, 3080
XbaI TCTAGA 1 cut(s) 317
XceI RCATGY 5 cut(s) 467, 1422, 1674, 2084, 2121
XmiI GTMKAC 2 cut(s) 367, 1488
XmnI GAANNNNTTC 1 cut(s) 267
XspI CTAG 5 cut(s) 6, 318, 1362, 1407, 2238
Zsp2I ATGCAT 1 cut(s) 1177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.