Rw5G050520

No description available

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
87267586 .. 87271914
4329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G050520.1

Sequence Viewer

Length: 3117 bp
ATGGCTAGATGGGATGAGATTCTGTCTCTTCCTGTACAGAATCCTCCGACTTTGGAGTTCTCTGCTACTGATCTTGTGTGGTCGAAGGTGGAAGGTTGGTGTGACAAGAAAGATAGAGTTGCTGTAATCCCCTATGCCAGAGTTGATGCTTTTGTGAGGGGTGAATCTTCGAACAAAGAGTGTCTGACGAGATTTCATGTTGAAGCGAGGCGGCGGCGGCAGGCAAAGACGAATTGCAGACCAAAGGTTGATGGCATCCTTGAATATATTCTATATTGGTGTTCCTTTGGTCCTGTTGACCACAGGATGGGCGGCTCCATACGACCCAGTAGGACTAATTATGTCCCAAAGAAGAAAAATTCTGGTCGACCAAACACCAAGAGAGGTTGTACCTGCCACTTTATGGTGAAACGCTTAATTGCTGAACCGTCAGTAGCGCTTCTTGTATATAATTCTGTTAAGCATGTGGATAAGAAAGGACTGCCATGCCATGGCCCAGAAGATAAGATGGCTGCTGGAACGCGCGCTATGTTTGCCCCATACATCTCTGAGGATCTACGCCTTCGTGTGCTATCTTTGCTATATGTGGGGGTCTCTGTGGAGACCATAATGCAGAGACACAGTGAATCCGTAGAGAGACAGGGTGGTCCATGTAATCGTGATGACCTCTTAATCCATAGGTATGTTCGCAGACAGGAGAGGATCATTCGACGTTCTACATATGAATTGGATGCGGATGATGCAGTTAGCATCAGCATGTGGGTGGAAAACCATCAGAATAGCATTTTCTTCTTTGAGGATTTCTCCGAGACGGACCCTTTCACTTTGGGCATTCAAACAGACTGGCAGCTGCAACGGATGATTCGCTTTGGCAATCACAGCCTTGTAGCCTCTGATTCAAGGTTCGGAACAAACAAATTAAAGTATCCTGTTCACAGTCTCCTTGTATTTAACCAAGACAACAAGGCCATTCCGGTAGCATGGATAGTGAGTCCAAAATTTGCAAGTTCTAATACCCATAAATGGATGAGAGCTCTTTTCAATAGAGTTCAGACGAAAGATCCTTCATGGAAGTTGGCTGGGGATGTATTTCACTGCTCAGTGCTGACAAGCTTCTGGCGGGTTCGTCATGCATGGCATAAAAACTTGGTAAAGAAATTAGATAACATATGTCAACAACGAGGAACAGATGGTTTGTTTGCGGATTTCATGGAAGATTTTGTTGATGCATCAGATTTTGTGGATTACTTTAAGGCAACCTGGTATCCGAGAATATGGACTACTGCATTAGAAAGTCTTCCTCTCGCTAGCCAGGAAACATGTGCAGCAATGGAATTCTACCACAACCAACTCAAGCTTAGGTTATTGAATGAGAAGAAACCCAGTGTCTACAAAAGAGTTGATTGGCTGGTTGATAAGCTGGGTACCCAAGTGCATTACTATTTCTGGCTTGATGAATACTCTGAGGAGGATGATTTTGCACGATACTGGAAAGATGAGTGGGTGAACGGTTTAACAGCTTGGCGAACAGCTTTGGAGATTCCAGACTCTAATGTTGTCATTGAAGGTACACGTGCAAAAGTAACAGACCAGCTTGATCAAGAAAAGGCTTATGTTTTTTGGAACCCTGGTTCACAATTCAATATTTGCAACTGCAGTTGGGCAGAAATGGGGAACCTGTGTGAGCATATACTCAAGGTTATTAGTGTCTGCAGGAAAAGAAGTCATCCTGTGCCATCTGTCAGCTTATTGCAGTTCCACCAGGCCTTGCTTGATATGCTCCATTGCCCACCTCATGATTCTTTAATTCGTGATCATGCTGTTTCTTTAGCGGTCTTTGTACAGAACCAGTTAAGTGGACCTAATTTGGAAAGCAGCAATAGCACAATGGATCAGGCAGCTTTAGCCGATAAAGATCTAGAAATAGTAAATGAGGGCCCAGTAAGTGAAGAAGTATTATCTCATAATGAGAATAGTTGTGCGGATGAGCATGTTGCTGTGGGTGCTGAAACGAGTAGTCTAGTTGCATGTGGAAATGGCATATATAATGAGGGTTGTGGAGAAGAAATCACTTCTTCTGAGATGGATGTTGATTCATCATCCATCTGTATTTCTCCACCTGGGTTACATTCTGTTGATGAGGTTGTGTCTAGTGGTGTCCTCTCAGGAAGCAGACAGAGGTCCTTGTTTAACACAGAAACTGAAGATCTGCTTTCCACAGATGATCCTCTCACTAATCCAAGTGAATATGTGGACGATATTTTAGATGAAAATTGCAAAAAAAATGTGATGAGTACGGATCCACTCTCCTTTCATATCCCTTGTTTAACAATGGAGTTTGTGGAGCAATGCACGGTACCCCATCCTAATGATCTCCACAGCCATGAAGTCAATCCCACTGTTATTTCGAAAGTATGTGATGAAAATACTGTTAATAACAATACCTCCCCATCTTCGTCTGTGCCTCATGAACCACAAGCTTCAGGTGTCATAGAAAAAGAGAACATGGAAATTGAAAGTACGGACGGAATGGACTTTGTGGAGCATTGCGCATTAACCAATCCCAACAGTAACGACAGCCATGATATCGATATTGAGCCTACTGTTATTGCCAAAAGATCTCCGGACAATACTGTTTTTAACAAGACCTCTGCATCTTCATTTATGCCTGTTGAATCAGAAATGGTTGAAGTGGCTGAAACTGCAGGTTTCATTTTAGAAAATGATAGAATGGAAATTGGAAGTGAGAATGGTAGCACAAGCAAGCACAATCTGTCTGCTAATAATCCTTCCACCTTGGACGGCATTCGTGGTTGTATGATAAATGGTTCAGATTGTTGTCGGGATTCTGAGTCAGTTGGCAATGCGATGGTTGTGTACTCAGAACCATTGCTCAAGTTCTCATCAACATCAAGTTGCAACAAAGAAGAGCTGCCTGTTGAGAACGGGGCTACTGAAACTGGGTCTGGTGAGAAGTCATCTTCAATCACTGAATCTTATCTTAAAAAGTGTAAACTTCAAGAGGGTGCCGAAATCATCAACAACAATGAGGTGATCCACCAGCCAGTTATCAGTGACATCAATGTTTACTTCTGTAAAGGGAAATGCTCGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1038

Amino Acids

116.84

Weight (kDa)

5.28

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 645
Acc16I TGCGCA 1 cut(s) 2551
Acc36I ACCTGC 2 cut(s) 401, 2696
Acc65I GGTACC 2 cut(s) 1424, 2356
AccB1I GGYRCC 3 cut(s) 1424, 2356, 3026
AccB7I CCANNNNNTGG 3 cut(s) 307, 403, 491
AccI GTMKAC 2 cut(s) 367, 1389
AccII CGCG 2 cut(s) 523, 525
AccIII TCCGGA 1 cut(s) 2623
AciI CCGC 9 cut(s) 211, 214, 217, 312, 734, 1120, 1202, 1832, 1982
AclWI GGATC 8 cut(s) 561, 710, 1055, 1899, 2219, 2294, 2307, 3049
AcsI RAATTY 3 cut(s) 358, 998, 1334
AcuI CTGAAG 2 cut(s) 2223, 2466
AcvI CACGTG 1 cut(s) 1574
AfaI GTAC 9 cut(s) 36, 391, 1426, 1570, 1842, 2296, 2358, 2521, 2879
AfeI AGCGCT 1 cut(s) 438
AfiI CCNNNNNNNGG 4 cut(s) 307, 403, 491, 1023
AflIII ACRYGT 2 cut(s) 1319, 1571
AjnI CCWGG 5 cut(s) 1259, 1311, 1627, 1761, 2119
AloI GAACNNNNNNTCC 2 cut(s) 1615, 1647
Alw21I GWGCWC 1 cut(s) 1036
Alw26I GTCTC 7 cut(s) 30, 596, 598, 610, 631, 803, 944
AlwI GGATC 8 cut(s) 561, 710, 1055, 1899, 2219, 2294, 2307, 3049
AlwNI CAGNNNCTG 1 cut(s) 2201
Ama87I CYCGRG 1 cut(s) 3109
Aor13HI TCCGGA 1 cut(s) 2623
Aor51HI AGCGCT 1 cut(s) 438
AoxI GGCC 4 cut(s) 493, 966, 1764, 1936
ApaI GGGCCC 1 cut(s) 1940
ApeKI GCWGC 7 cut(s) 512, 847, 850, 1325, 1875, 1898, 2932
ApoI RAATTY 3 cut(s) 358, 998, 1334
Asp700I GAANNNNTTC 2 cut(s) 267, 1296
Asp718I GGTACC 2 cut(s) 1424, 2356
AspLEI GCGC 4 cut(s) 439, 525, 527, 2552
AspS9I GGNCC 8 cut(s) 290, 494, 647, 814, 1859, 1936, 1937, 2181
AsuHPI GGTGA 5 cut(s) 173, 418, 1516, 2981, 3064
AsuII TTCGAA 2 cut(s) 170, 2408
AsuNHI GCTAGC 1 cut(s) 1307
AvaI CYCGRG 1 cut(s) 3109
AvaII GGWCC 5 cut(s) 290, 647, 814, 1859, 2181
BaeGI GKGCMC 1 cut(s) 1940
BaeI ACNNNNGTAYC 2 cut(s) 1416, 1449
BamHI GGATCC 1 cut(s) 2299
BanI GGYRCC 3 cut(s) 1424, 2356, 3026
BanII GRGCYC 2 cut(s) 1036, 1940
BbrPI CACGTG 1 cut(s) 1574
BbsI GAAGAC 1 cut(s) 1289
Bbv12I GWGCWC 1 cut(s) 1036
BbvI GCAGC 7 cut(s) 499, 837, 859, 1337, 1887, 1910, 2919
BceAI ACGGC 1 cut(s) 2818
BciT130I CCWGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
BciVI GTATCC 2 cut(s) 936, 1275
BclI TGATCA 2 cut(s) 1597, 1813
BcoDI GTCTC 7 cut(s) 30, 596, 598, 610, 631, 803, 944
BfaI CTAG 5 cut(s) 6, 1308, 1919, 2021, 2151
BfmI CTRYAG 3 cut(s) 1654, 1711, 2703
BfoI RGCGCY 1 cut(s) 440
BfuAI ACCTGC 2 cut(s) 401, 2696
BfuI GTATCC 2 cut(s) 936, 1275
BglII AGATCT 3 cut(s) 1915, 2206, 2618
Bme1390I CCNGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
Bme18I GGWCC 5 cut(s) 290, 647, 814, 1859, 2181
BmeT110I CYCGRG 1 cut(s) 3109
BmgT120I GGNCC 8 cut(s) 290, 494, 647, 814, 1859, 1936, 1937, 2181
BmiI GGNNCC 9 cut(s) 316, 816, 1426, 1625, 1676, 1938, 2301, 2358, 3028
BmrFI CCNGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
BmrI ACTGGG 4 cut(s) 321, 1377, 1934, 2970
BmsI GCATC 8 cut(s) 136, 264, 721, 730, 759, 1216, 1238, 2663
BmtI GCTAGC 1 cut(s) 1311
BmuI ACTGGG 4 cut(s) 321, 1377, 1934, 2970
BoxI GACNNNNGTC 1 cut(s) 2179
BpiI GAAGAC 1 cut(s) 1289
BplI GAGNNNNNCTC 2 cut(s) 788, 820
Bpu10I CCTNAGC 1 cut(s) 1358
Bpu14I TTCGAA 2 cut(s) 170, 2408
BpuEI CTTGAG 3 cut(s) 1337, 1679, 2879
Bsa29I ATCGAT 1 cut(s) 2589
BsaAI YACGTR 1 cut(s) 1574
BsaBI GATNNNNATC 1 cut(s) 1914
BsaI GGTCTC 2 cut(s) 596, 598
BsaJI CCNNGG 4 cut(s) 490, 1627, 2120, 2796
BsaWI WCCGGW 2 cut(s) 973, 2623
BsaXI ACNNNNNCTCC 2 cut(s) 2429, 2459
Bsc4I CCNNNNNNNGG 4 cut(s) 307, 403, 491, 1023
Bse1I ACTGG 8 cut(s) 327, 848, 1383, 1493, 1849, 1940, 2965, 3065
Bse3DI GCAATG 6 cut(s) 1335, 1783, 2354, 2545, 2869, 2888
Bse8I GATNNNNATC 1 cut(s) 1914
BseAI TCCGGA 1 cut(s) 2623
BseBI CCWGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
BseCI ATCGAT 1 cut(s) 2589
BseDI CCNNGG 4 cut(s) 490, 1627, 2120, 2796
BseJI GATNNNNATC 1 cut(s) 1914
BseLI CCNNNNNNNGG 4 cut(s) 307, 403, 491, 1023
BseMI GCAATG 6 cut(s) 1335, 1783, 2354, 2545, 2869, 2888
BseMII CTCAG 7 cut(s) 540, 1113, 1455, 2070, 2178, 2841, 2895
BseNI ACTGG 8 cut(s) 327, 848, 1383, 1493, 1849, 1940, 2965, 3065
BsePI GCGCGC 1 cut(s) 523
BseRI GAGGAG 1 cut(s) 1481
BseSI GKGCMC 1 cut(s) 1940
BseXI GCAGC 7 cut(s) 499, 837, 859, 1337, 1887, 1910, 2919
BseYI CCCAGC 2 cut(s) 1079, 1420
BsgI GTGCAG 1 cut(s) 1344
Bsh1236I CGCG 2 cut(s) 523, 525
BshFI GGCC 4 cut(s) 495, 968, 1766, 1938
BshNI GGYRCC 3 cut(s) 1424, 2356, 3026
BshVI ATCGAT 1 cut(s) 2589
BsiHKAI GWGCWC 1 cut(s) 1036
BsiHKCI CYCGRG 1 cut(s) 3109
BsiSI CCGG 2 cut(s) 974, 2624
BslFI GGGAC 1 cut(s) 329
BslI CCNNNNNNNGG 4 cut(s) 307, 403, 491, 1023
BsmAI GTCTC 7 cut(s) 30, 596, 598, 610, 631, 803, 944
BsmBI CGTCTC 1 cut(s) 803
BsmFI GGGAC 1 cut(s) 329
BsmI GAATGC 2 cut(s) 831, 2805
BsnI GGCC 4 cut(s) 495, 968, 1766, 1938
Bso31I GGTCTC 2 cut(s) 596, 598
BsoBI CYCGRG 1 cut(s) 3109
Bsp119I TTCGAA 2 cut(s) 170, 2408
Bsp120I GGGCCC 1 cut(s) 1936
Bsp1286I GDGCHC 2 cut(s) 1036, 1940
Bsp13I TCCGGA 1 cut(s) 2623
Bsp1407I TGTACA 2 cut(s) 34, 1840
Bsp19I CCATGG 1 cut(s) 490
BspACI CCGC 9 cut(s) 211, 214, 217, 312, 734, 1120, 1202, 1832, 1982
BspANI GGCC 4 cut(s) 495, 968, 1766, 1938
BspCNI CTCAG 7 cut(s) 541, 1112, 1456, 2071, 2177, 2842, 2894
BspDI ATCGAT 1 cut(s) 2589
BspEI TCCGGA 1 cut(s) 2623
BspFNI CGCG 2 cut(s) 523, 525
BspHI TCATGA 2 cut(s) 1795, 2467
BspLI GGNNCC 9 cut(s) 316, 816, 1426, 1625, 1676, 1938, 2301, 2358, 3028
BspMAI CTGCAG 3 cut(s) 1658, 1715, 2707
BspMI ACCTGC 2 cut(s) 401, 2696
BspOI GCTAGC 1 cut(s) 1311
BspPI GGATC 8 cut(s) 561, 710, 1055, 1899, 2219, 2294, 2307, 3049
BspQI GCTCTTC 1 cut(s) 2922
BspT104I TTCGAA 2 cut(s) 170, 2408
BspT107I GGYRCC 3 cut(s) 1424, 2356, 3026
BspTNI GGTCTC 2 cut(s) 596, 598
BsrDI GCAATG 6 cut(s) 1335, 1783, 2354, 2545, 2869, 2888
BsrGI TGTACA 2 cut(s) 34, 1840
BsrI ACTGG 8 cut(s) 327, 848, 1383, 1493, 1849, 1940, 2965, 3065
BssECI CCNNGG 4 cut(s) 490, 1627, 2120, 2796
BssHII GCGCGC 1 cut(s) 523
BssT1I CCWWGG 2 cut(s) 490, 2796
Bst2UI CCWGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
Bst6I CTCTTC 2 cut(s) 33, 2922
BstAUI TGTACA 2 cut(s) 34, 1840
BstBAI YACGTR 1 cut(s) 1574
BstBI TTCGAA 2 cut(s) 170, 2408
BstC8I GCNNGC 4 cut(s) 222, 525, 1309, 2765
BstDEI CTNAG 8 cut(s) 549, 1099, 1358, 1464, 2079, 2164, 2850, 2881
BstDSI CCRYGG 1 cut(s) 490
BstFNI CGCG 2 cut(s) 523, 525
BstH2I RGCGCY 1 cut(s) 440
BstHHI GCGC 4 cut(s) 439, 525, 527, 2552
BstMAI GTCTC 7 cut(s) 30, 596, 598, 610, 631, 803, 944
BstNI CCWGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
BstNSI RCATGY 5 cut(s) 467, 760, 1323, 1994, 2031
BstPAI GACNNNNGTC 1 cut(s) 2179
BstSCI CCNGG 5 cut(s) 1259, 1311, 1627, 1761, 2119
BstSFI CTRYAG 3 cut(s) 1654, 1711, 2703
BstSLI GKGCMC 1 cut(s) 1940
BstUI CGCG 2 cut(s) 523, 525
BstV1I GCAGC 7 cut(s) 499, 837, 859, 1337, 1887, 1910, 2919
BstV2I GAAGAC 1 cut(s) 1289
BstX2I RGATCY 6 cut(s) 553, 1060, 1915, 2206, 2299, 2618
BstXI CCANNNNNNTGG 1 cut(s) 1856
BstYI RGATCY 6 cut(s) 553, 1060, 1915, 2206, 2299, 2618
Bsu15I ATCGAT 1 cut(s) 2589
BsuI GTATCC 2 cut(s) 936, 1275
BsuRI GGCC 4 cut(s) 495, 968, 1766, 1938
BsuTUI ATCGAT 1 cut(s) 2589
BtgI CCRYGG 1 cut(s) 490
BtgZI GCGATG 1 cut(s) 2882
BtsI GCAGTG 1 cut(s) 1093
BtsIMutI CAGTG 7 cut(s) 628, 1093, 1107, 1390, 2397, 2988, 3079
BveI ACCTGC 2 cut(s) 401, 2696
Cac8I GCNNGC 4 cut(s) 222, 525, 1309, 2765
CaiI CAGNNNCTG 1 cut(s) 2201
CciI TCATGA 2 cut(s) 1795, 2467
CfoI GCGC 4 cut(s) 439, 525, 527, 2552
Cfr13I GGNCC 8 cut(s) 290, 494, 647, 814, 1859, 1936, 1937, 2181
ClaI ATCGAT 1 cut(s) 2589
CsiI ACCWGGT 1 cut(s) 1259
Csp6I GTAC 9 cut(s) 35, 390, 1425, 1569, 1841, 2295, 2357, 2520, 2878
CviQI GTAC 9 cut(s) 35, 390, 1425, 1569, 1841, 2295, 2357, 2520, 2878
DdeI CTNAG 8 cut(s) 549, 1099, 1358, 1464, 2079, 2164, 2850, 2881
DrdI GACNNNNNNGTC 1 cut(s) 645
DseDI GACNNNNNNGTC 1 cut(s) 645
Eam1104I CTCTTC 2 cut(s) 33, 2922
EarI CTCTTC 2 cut(s) 33, 2922
Ecl136II GAGCTC 1 cut(s) 1034
Eco130I CCWWGG 2 cut(s) 490, 2796
Eco147I AGGCCT 1 cut(s) 1766
Eco24I GRGCYC 2 cut(s) 1036, 1940
Eco31I GGTCTC 2 cut(s) 596, 598
Eco32I GATATC 1 cut(s) 2587
Eco47I GGWCC 5 cut(s) 290, 647, 814, 1859, 2181
Eco47III AGCGCT 1 cut(s) 438
Eco53kI GAGCTC 1 cut(s) 1034
Eco57I CTGAAG 2 cut(s) 2223, 2466
Eco72I CACGTG 1 cut(s) 1574
Eco88I CYCGRG 1 cut(s) 3109
EcoICRI GAGCTC 1 cut(s) 1034
EcoO109I RGGNCCY 2 cut(s) 1936, 2181
EcoRI GAATTC 1 cut(s) 1334
EcoRII CCWGG 5 cut(s) 1259, 1311, 1627, 1761, 2119
EcoRV GATATC 1 cut(s) 2587
EcoT14I CCWWGG 2 cut(s) 490, 2796
EcoT22I ATGCAT 2 cut(s) 1135, 1231
EcoT38I GRGCYC 2 cut(s) 1036, 1940
ErhI CCWWGG 2 cut(s) 490, 2796
Esp3I CGTCTC 1 cut(s) 803
FalI AAGNNNNNCTT 2 cut(s) 2196, 2228
FaqI GGGAC 1 cut(s) 329
FauI CCCGC 1 cut(s) 1113
FauNDI CATATG 2 cut(s) 721, 1169
FbaI TGATCA 2 cut(s) 1597, 1813
FblI GTMKAC 2 cut(s) 367, 1389
FriOI GRGCYC 2 cut(s) 1036, 1940
FspBI CTAG 5 cut(s) 6, 1308, 1919, 2021, 2151
FspI TGCGCA 1 cut(s) 2551
GlaI GCGC 4 cut(s) 438, 524, 526, 2551
GsaI CCCAGC 2 cut(s) 1083, 1424
HaeII RGCGCY 1 cut(s) 440
HaeIII GGCC 4 cut(s) 495, 968, 1766, 1938
HapII CCGG 2 cut(s) 974, 2624
HhaI GCGC 4 cut(s) 439, 525, 527, 2552
Hin6I GCGC 4 cut(s) 437, 523, 525, 2550
HinP1I GCGC 4 cut(s) 437, 523, 525, 2550
HincII GTYRAC 3 cut(s) 298, 368, 1175
HindII GTYRAC 3 cut(s) 298, 368, 1175
HindIII AAGCTT 3 cut(s) 1111, 1355, 2478
HpaII CCGG 2 cut(s) 974, 2624
HphI GGTGA 5 cut(s) 173, 418, 1516, 2981, 3064
Hpy99I CGWCG 1 cut(s) 714
HpyAV CCTTC 6 cut(s) 79, 86, 572, 1074, 1559, 2799
HpyCH4IV ACGT 2 cut(s) 712, 1573
HpyF3I CTNAG 8 cut(s) 549, 1099, 1358, 1464, 2079, 2164, 2850, 2881
HpySE526I ACGT 2 cut(s) 712, 1573
HspAI GCGC 4 cut(s) 437, 523, 525, 2550
Kpn2I TCCGGA 1 cut(s) 2623
KpnI GGTACC 2 cut(s) 1428, 2360
Ksp22I TGATCA 2 cut(s) 1597, 1813
LguI GCTCTTC 1 cut(s) 2922
LmnI GCTCC 4 cut(s) 320, 1785, 2344, 2542
Lsp1109I GCAGC 7 cut(s) 499, 837, 859, 1337, 1887, 1910, 2919
LweI GCATC 8 cut(s) 136, 264, 721, 730, 759, 1216, 1238, 2663
MabI ACCWGGT 1 cut(s) 1259
MaeI CTAG 5 cut(s) 6, 1308, 1919, 2021, 2151
MaeII ACGT 2 cut(s) 712, 1573
MaeIII GTNAC 5 cut(s) 101, 1582, 2124, 2570, 3074
MflI RGATCY 6 cut(s) 553, 1060, 1915, 2206, 2299, 2618
MhlI GDGCHC 2 cut(s) 1036, 1940
MlyI GAGTC 3 cut(s) 1000, 1541, 2861
MmeI TCCRAC 1 cut(s) 71
Mph1103I ATGCAT 2 cut(s) 1135, 1231
MroI TCCGGA 1 cut(s) 2623
MroXI GAANNNNTTC 2 cut(s) 267, 1296
MslI CAYNNNNRTG 5 cut(s) 681, 755, 761, 2367, 2382
MspA1I CMGCKG 1 cut(s) 850
MspI CCGG 2 cut(s) 974, 2624
MspR9I CCNGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
Mva1269I GAATGC 2 cut(s) 831, 2805
MvaI CCWGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
MvnI CGCG 2 cut(s) 523, 525
NcoI CCATGG 1 cut(s) 490
NdeI CATATG 2 cut(s) 721, 1169
NheI GCTAGC 1 cut(s) 1307
NlaIV GGNNCC 9 cut(s) 316, 816, 1426, 1625, 1676, 1938, 2301, 2358, 3028
NmuCI GTSAC 2 cut(s) 101, 3074
NsbI TGCGCA 1 cut(s) 2551
NsiI ATGCAT 2 cut(s) 1135, 1231
NspI RCATGY 5 cut(s) 467, 760, 1323, 1994, 2031
NspV TTCGAA 2 cut(s) 170, 2408
PaeR7I CTCGAG 1 cut(s) 3109
PagI TCATGA 2 cut(s) 1795, 2467
PauI GCGCGC 1 cut(s) 523
PceI AGGCCT 1 cut(s) 1766
PciI ACATGT 1 cut(s) 1319
PciSI GCTCTTC 1 cut(s) 2922
PctI GAATGC 2 cut(s) 831, 2805
PdmI GAANNNNTTC 2 cut(s) 267, 1296
PflMI CCANNNNNTGG 3 cut(s) 307, 403, 491
PleI GAGTC 3 cut(s) 999, 1541, 2860
PmaCI CACGTG 1 cut(s) 1574
PmlI CACGTG 1 cut(s) 1574
PpsI GAGTC 3 cut(s) 999, 1541, 2860
Ppu21I YACGTR 1 cut(s) 1574
PpuMI RGGWCCY 1 cut(s) 2181
PscI ACATGT 1 cut(s) 1319
PshAI GACNNNNGTC 1 cut(s) 2179
Psp124BI GAGCTC 1 cut(s) 1036
Psp5II RGGWCCY 1 cut(s) 2181
Psp6I CCWGG 5 cut(s) 1259, 1311, 1627, 1761, 2119
PspCI CACGTG 1 cut(s) 1574
PspFI CCCAGC 2 cut(s) 1079, 1420
PspGI CCWGG 5 cut(s) 1259, 1311, 1627, 1761, 2119
PspN4I GGNNCC 9 cut(s) 316, 816, 1426, 1625, 1676, 1938, 2301, 2358, 3028
PspOMI GGGCCC 1 cut(s) 1936
PspPI GGNCC 8 cut(s) 290, 494, 647, 814, 1859, 1936, 1937, 2181
PspPPI RGGWCCY 1 cut(s) 2181
PspXI VCTCGAGB 1 cut(s) 3109
PstI CTGCAG 3 cut(s) 1658, 1715, 2707
PstNI CAGNNNCTG 1 cut(s) 2201
PsuI RGATCY 6 cut(s) 553, 1060, 1915, 2206, 2299, 2618
PteI GCGCGC 1 cut(s) 523
PvuII CAGCTG 1 cut(s) 850
RsaI GTAC 9 cut(s) 36, 391, 1426, 1570, 1842, 2296, 2358, 2521, 2879
RsaNI GTAC 9 cut(s) 35, 390, 1425, 1569, 1841, 2295, 2357, 2520, 2878
RseI CAYNNNNRTG 5 cut(s) 681, 755, 761, 2367, 2382
SacI GAGCTC 1 cut(s) 1036
SalI GTCGAC 1 cut(s) 366
SapI GCTCTTC 1 cut(s) 2922
Sau96I GGNCC 8 cut(s) 290, 494, 647, 814, 1859, 1936, 1937, 2181
SchI GAGTC 3 cut(s) 1000, 1541, 2861
ScrFI CCNGG 5 cut(s) 1261, 1313, 1629, 1763, 2121
SduI GDGCHC 2 cut(s) 1036, 1940
SexAI ACCWGGT 1 cut(s) 1259
SfaNI GCATC 8 cut(s) 136, 264, 721, 730, 759, 1216, 1238, 2663
SfcI CTRYAG 3 cut(s) 1654, 1711, 2703
Sfr274I CTCGAG 1 cut(s) 3109
SfuI TTCGAA 2 cut(s) 170, 2408
SinI GGWCC 5 cut(s) 290, 647, 814, 1859, 2181
SlaI CTCGAG 1 cut(s) 3109
SmiMI CAYNNNNRTG 5 cut(s) 681, 755, 761, 2367, 2382
SmlI CTYRAG 4 cut(s) 1352, 1694, 2894, 3109
SmoI CTYRAG 4 cut(s) 1352, 1694, 2894, 3109
SseBI AGGCCT 1 cut(s) 1766
SsiI CCGC 9 cut(s) 211, 214, 217, 312, 734, 1120, 1202, 1832, 1982
SspI AATATT 1 cut(s) 1645
SspMI CTAG 5 cut(s) 6, 1308, 1919, 2021, 2151
SstI GAGCTC 1 cut(s) 1036
StuI AGGCCT 1 cut(s) 1766
StyD4I CCNGG 5 cut(s) 1259, 1311, 1627, 1761, 2119
StyI CCWWGG 2 cut(s) 490, 2796
TaiI ACGT 2 cut(s) 715, 1576
TaqI TCGA 7 cut(s) 83, 170, 367, 709, 2408, 2589, 3110
TatI WGTACW 3 cut(s) 34, 1840, 2877
TauI GCSGC 4 cut(s) 214, 217, 220, 315
TscAI CASTG 7 cut(s) 628, 1100, 1107, 1390, 2404, 2995, 3079
TseFI GTSAC 2 cut(s) 101, 3074
TseI GCWGC 7 cut(s) 512, 847, 850, 1325, 1875, 1898, 2932
Tsp45I GTSAC 2 cut(s) 101, 3074
TspGWI ACGGA 6 cut(s) 619, 827, 871, 2312, 2537, 2541
TspRI CASTG 7 cut(s) 628, 1100, 1107, 1390, 2404, 2995, 3079
Van91I CCANNNNNTGG 3 cut(s) 307, 403, 491
VpaK11BI GGWCC 5 cut(s) 290, 647, 814, 1859, 2181
XapI RAATTY 3 cut(s) 358, 998, 1334
XbaI TCTAGA 1 cut(s) 1918
XceI RCATGY 5 cut(s) 467, 760, 1323, 1994, 2031
XhoI CTCGAG 1 cut(s) 3109
XmiI GTMKAC 2 cut(s) 367, 1389
XmnI GAANNNNTTC 2 cut(s) 267, 1296
XspI CTAG 5 cut(s) 6, 1308, 1919, 2021, 2151
Zsp2I ATGCAT 2 cut(s) 1135, 1231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.