MD09G1283600.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0000990
Physical Location & Seq
Reverse (-)
36162114 .. 36168549
6436 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1283600.v1.1.491

Sequence Viewer

Length: 3132 bp
ATGCAATGGCTCAACACTTTTCTACTGTTGGCCCTTTTTGCAAATACTGCAAAGTTGGATGAAATAGCAAGAAGTAGAAACACAAAGAGAAAATTACACGACGAAAGGGTTTTTGGGGGTTCAGTCCTTCCCTCTCTCTCCGTCTCCAATCTCCGCAGACACCACAAGTGCGCAACCTCCTTCTCCCTGTTGCCCTTCTCTTACCAGATGGCTAGATGGGATGAGATTCTGTCCCTTCCTGTACAGAGTCCACCTGCACTGGAGTTTTCTTCTTCGGATCTTGTGTGGTCAAAGGTGGAAGGTTGGCGGGACAAGAAAGATCGAGTTGCTCTAATTCCATTTCCTCGAGTTGACGATTTTCTGAGGGGTGAATCCTCTAGTAAAGAATGTCCAACAAAATTTCATGTTGAAGCGAGGCGGCGGCGGCAGCCAAAGACGCCTTACAAACCAAAGGTTGATGGTATTCTTGAATATATTCTATATTGGTGTTCCTTTGGTCCTGATGACCATAGGAAGGGTGGGCTTGTACGACCCAGCAGGGTTAATATCCCAAAGAAGAAAAATGCTGGTCGACCGAACACCAAGAGAGGTTGTACCTGTCACTTTATTGTGAAACGATTAATTGCTGAACCCTCAGTGGCGCTTATTATATATAATCAGGATAAGCATGTAGATAGGAAAGGAGAGCCCTGCCATGGCCCCCAAGATAAGATGGCTGCTGGAACACGTGCTATGTTTGCCCCTTATATCTCTGAGGATCTACGTCTTCGTGTGCAATCTTTGTTATACGTGGGGGTCTCTGTGGAGACTATAATGCAGAGACACAATGAATCAGTAGAGAAACAGGGTGGTCCATCTAATCGTGATGACCTTTTAACCCATAGGTATGTTCGGAGGCAGGAGAGGGTCATTCGACGTTCTGTATATGAATTGGATGCCGATGATGTGGTTAGCATTAGCTTGTGGGTAGAAAACCATCAGAGTCATGTTTTCTTCTATGAGGATTTCTCTGATGTGGACCCTTTCACTTTGGGCATTCAAACAGAGTGGCAGTTGCAACAGATGATTCGCTTCGGCAATCGCAGCCTTATAGCTTCTGATTCAAGGTTCGGAACAACCAAATTGAAGTATCCCGTGCATAGTCTCCTTGTATTTAATGAAGACAACAAGGCCATTCCGGTAGCGTGGATAGTGGCTCCAAAGTTTGAAAGTTCCAATGCCCATAAATGGATGAGAGCTCTTTACAATAGAGTTCAAACGAAAGATCCTGCATGGAAGTTAGCTGGTTTCATAGTGGATGATCCTCTAGCTGATGTGCTCACCATCAGGGATGTATTCCAGTGTTCAGTGTTGATAAGCTTTTGGCGGGTCCGTCATGCATGGCATAAAAACTTAGTAAAGAAATGTGTGGACAATGAGATGCGAGCTACAATATCAAGAAGGCTTCATCAGGCAATGGATAACATCTGTGAACAACGAGGAACTGAGCGTTTGTTTGAGGACTTAATAGAAGATTTTCTTGATGAATCAGATTTTATGGATTACTTTAAGGCAACCTGGTATCCTAGAACTGGGATGTGGATCTCTGCGCTACAAAATCTTCCTCTTGCTAGCCAGGAAACCTCTGCGGCAATGGAGTTCTACCACAACCAACTAAAGCTTCGGTTATTGAACGAGAAGAAACCTAGCGTGTACAAACGAGTTGATTGGTTGGTTGATAAGCTCGGTACAAAAGTGTATTCCAACTTCTGGCTTGATGAATATTCTGAGAAGGATGATTTTGCACGATATTGGAAAGATGAGTGGGCGAGTGGTTTAACATCTTGGCGTAAAGCTTTGAAGATTCCTGACCGCAATATTGTCATAGAGGGTACACGTGCAAAAGTTATTGACGAGCTCGACCAAGACAGGGTTTATGTTGTTTGGAACCCTGGTTCTCAGTTCAGTATTTGCAACTGTCGTTGGGCAGAAATGGGCAACCTGTGTGAACATATACTCAAAGTTATTAACGTTTGCCGGAAAAGGTCGTCTACACCATCTATCAGCCTTTTGCAGTACCACAAGGCCTTGATTGATTTGCTGCACTGCCCACCTCATGATTCTTTGATTCGTGATCATGCTGTTTCTTTAGCAGTATTTGTACAGAAGCAATTAAGTGGACTAAATAATTTGGAAAGCAACAATACCGCAATGGATGTGGCATTTTTTGCCAATCGAGATCAAGAATTAGTAAATGAGGATCCAATAAATGAGGAAGTATTATCTCTAAATGAGAATAACTGTGGGGATGGAGATGGAGATGTAGCTGCTGAGAGAACCAAGGGTAAAGTGGCTACTGAATCGAGTAGTTTGGTAGCATGTGGAGATGACATATGTAATGAGAGTTATGGAGAAGAAATTACTTGCGATGAGATGGATGTCGACCCGTCATCCATCTGCATTTCCCCACCCGGGTTGCATTCTGTTGACGAGGTTGTGTCTAGCAGTGTCTTCCCTGAAAGCAGACAGAGGTCATTGTTTAACAGAGAGCTTGAAGACCTGCCTCCTGCTGATGATGCCCGCACAACTGGATTTGAGGATGACATCTTAAATAGAAATAGCCAAGAAAATACGATGGATGAGGACATGAATATCCCTTCCTCAACAATGGAGTTTGTGGAGCAATGCACAGTAACTCATCCTGATGATCACCACAGCCACGATATTGAACCCGCTGTTATTTGCAAGACATCTGAGGACAATACTGTGTATAAAAAGACTCCCCCATCTGCATCTATGCCTGTTGAATCACAAGTGGTCGAAGATGCTGAAGTTCCAGGTGTCATTTCAGAAAGTGATAGAATGGAAACTGAAAACAAGAATGGAAGCACGAGTAATCAGCCATCCTCCGCTGATGATGCTGCCAGTATTGACGGGCCTTGTGAGAACTTGGTAAATGATTCTGATTGTAGTCAGGACTCAAAAGCAGTTGGCAATATGATGGTTGTACAACCAGAAGCACTGAGTAAATGCTCGTCAAGATCGAGGTACAACGAGGAACAACTGCCCATTGAGAATGGAGATACCGGAACTGGACCTTCTGAGAACCCATCTTCATTTGCTGAACCTCATCTTACTAAGAGTGAAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1044

Amino Acids

118.67

Weight (kDa)

5.46

Isoelectric Point (pI)

50.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 262
Acc16I TGCGCA 1 cut(s) 172
Acc36I ACCTGC 2 cut(s) 262, 2547
AccB7I CCANNNNNTGG 1 cut(s) 1749
AccI GTMKAC 3 cut(s) 571, 2030, 2421
AclI AACGTT 1 cut(s) 2010
AclWI GGATC 7 cut(s) 285, 765, 1259, 1295, 1589, 2234, 2247
AcsI RAATTY 1 cut(s) 398
AcuI CTGAAG 1 cut(s) 2829
AcvI CACGTG 2 cut(s) 728, 1877
AcyI GRCGYC 1 cut(s) 437
AfiI CCNNNNNNNGG 7 cut(s) 514, 695, 1227, 1571, 1749, 1909, 2451
AflIII ACRYGT 2 cut(s) 725, 1874
AjnI CCWGG 4 cut(s) 1556, 1614, 1930, 2815
AjuI GAANNNNNNNTTGG 4 cut(s) 96, 128, 1644, 1676
AloI GAACNNNNNNTCC 2 cut(s) 1918, 1950
Alw21I GWGCWC 3 cut(s) 1240, 1320, 1899
Alw26I GTCTC 5 cut(s) 148, 800, 802, 814, 1148
AlwI GGATC 7 cut(s) 285, 765, 1259, 1295, 1589, 2234, 2247
Ama87I CYCGRG 2 cut(s) 345, 2450
AoxI GGCC 5 cut(s) 30, 697, 1170, 2064, 2915
ApeKI GCWGC 6 cut(s) 427, 716, 1083, 2080, 2306, 2900
ApoI RAATTY 1 cut(s) 398
AseI ATTAAT 1 cut(s) 620
Asp700I GAANNNNTTC 2 cut(s) 474, 1515
AspLEI GCGC 3 cut(s) 173, 643, 1591
AspS9I GGNCC 8 cut(s) 31, 497, 698, 851, 1018, 1369, 2915, 3074
AsuC2I CCSGG 2 cut(s) 2451, 2452
AsuHPI GGTGA 3 cut(s) 380, 1312, 2681
AsuNHI GCTAGC 1 cut(s) 1610
AvaI CYCGRG 2 cut(s) 345, 2450
AvaII GGWCC 5 cut(s) 497, 851, 1018, 1369, 3074
BaeI ACNNNNGTAYC 2 cut(s) 1719, 1752
BamHI GGATCC 1 cut(s) 2239
BanII GRGCYC 3 cut(s) 690, 1240, 1899
BarI GAAGNNNNNNTAC 2 cut(s) 1730, 1762
BauI CACGAG 1 cut(s) 2869
BbrPI CACGTG 2 cut(s) 728, 1877
BbsI GAAGAC 4 cut(s) 758, 1167, 2482, 2541
Bbv12I GWGCWC 3 cut(s) 1240, 1320, 1899
BbvI GCAGC 6 cut(s) 439, 703, 1095, 2067, 2293, 2887
BciT130I CCWGG 4 cut(s) 1558, 1616, 1932, 2817
BciVI GTATCC 2 cut(s) 1140, 1572
BclI TGATCA 2 cut(s) 2113, 2686
BcnI CCSGG 2 cut(s) 2451, 2452
BcoDI GTCTC 5 cut(s) 148, 800, 802, 814, 1148
BfaI CTAG 7 cut(s) 213, 378, 1307, 1566, 1611, 1686, 2481
BfoI RGCGCY 1 cut(s) 644
BfuAI ACCTGC 2 cut(s) 262, 2547
BfuI GTATCC 2 cut(s) 1140, 1572
Bme1390I CCNGG 6 cut(s) 1558, 1616, 1932, 2451, 2452, 2817
Bme18I GGWCC 5 cut(s) 497, 851, 1018, 1369, 3074
BmeT110I CYCGRG 2 cut(s) 345, 2450
BmgT120I GGNCC 8 cut(s) 31, 497, 698, 851, 1018, 1369, 2915, 3074
BmiI GGNNCC 6 cut(s) 700, 1020, 1197, 1370, 1928, 2241
BmrFI CCNGG 6 cut(s) 1558, 1616, 1932, 2451, 2452, 2817
BmrI ACTGGG 1 cut(s) 1581
BmsI GCATC 6 cut(s) 925, 1410, 2545, 2780, 2794, 2887
BmtI GCTAGC 1 cut(s) 1614
BmuI ACTGGG 1 cut(s) 1581
BoxI GACNNNNGTC 1 cut(s) 2509
BpiI GAAGAC 4 cut(s) 758, 1167, 2482, 2541
BplI GAGNNNNNCTC 2 cut(s) 992, 1024
BpmI CTGGAG 1 cut(s) 281
BpuMI CCSGG 2 cut(s) 2451, 2452
BsaAI YACGTR 3 cut(s) 728, 790, 1877
BsaBI GATNNNNATC 1 cut(s) 1580
BsaHI GRCGYC 1 cut(s) 437
BsaI GGTCTC 1 cut(s) 802
BsaJI CCNNGG 4 cut(s) 694, 1930, 2319, 2450
BsaWI WCCGGW 2 cut(s) 1177, 3065
Bsc4I CCNNNNNNNGG 7 cut(s) 514, 695, 1227, 1571, 1749, 1909, 2451
Bse1I ACTGG 6 cut(s) 264, 1339, 1576, 2572, 2904, 3076
Bse3DI GCAATG 5 cut(s) 11, 1461, 1638, 2196, 2669
Bse8I GATNNNNATC 1 cut(s) 1580
BseBI CCWGG 4 cut(s) 1558, 1616, 1932, 2817
BseDI CCNNGG 4 cut(s) 694, 1930, 2319, 2450
BseJI GATNNNNATC 1 cut(s) 1580
BseLI CCNNNNNNNGG 7 cut(s) 514, 695, 1227, 1571, 1749, 1909, 2451
BseMI GCAATG 5 cut(s) 11, 1461, 1638, 2196, 2669
BseNI ACTGG 6 cut(s) 264, 1339, 1576, 2572, 2904, 3076
BseXI GCAGC 6 cut(s) 439, 703, 1095, 2067, 2293, 2887
BseYI CCCAGC 1 cut(s) 533
BsgI GTGCAG 2 cut(s) 240, 2066
Bsh1285I CGRYCG 1 cut(s) 575
BshFI GGCC 5 cut(s) 32, 699, 1172, 2066, 2917
BsiEI CGRYCG 1 cut(s) 575
BsiHKAI GWGCWC 3 cut(s) 1240, 1320, 1899
BsiHKCI CYCGRG 2 cut(s) 345, 2450
BsiSI CCGG 4 cut(s) 1178, 2017, 2451, 3066
BslFI GGGAC 2 cut(s) 217, 323
BslI CCNNNNNNNGG 7 cut(s) 514, 695, 1227, 1571, 1749, 1909, 2451
BsmAI GTCTC 5 cut(s) 148, 800, 802, 814, 1148
BsmBI CGTCTC 1 cut(s) 148
BsmFI GGGAC 2 cut(s) 217, 323
BsmI GAATGC 2 cut(s) 1035, 2458
BsnI GGCC 5 cut(s) 32, 699, 1172, 2066, 2917
Bso31I GGTCTC 1 cut(s) 802
BsoBI CYCGRG 2 cut(s) 345, 2450
Bsp1286I GDGCHC 4 cut(s) 690, 1240, 1320, 1899
Bsp1407I TGTACA 4 cut(s) 241, 1692, 2140, 2986
Bsp19I CCATGG 1 cut(s) 694
BspANI GGCC 5 cut(s) 32, 699, 1172, 2066, 2917
BspHI TCATGA 1 cut(s) 2095
BspLI GGNNCC 6 cut(s) 700, 1020, 1197, 1370, 1928, 2241
BspMI ACCTGC 2 cut(s) 262, 2547
BspOI GCTAGC 1 cut(s) 1614
BspPI GGATC 7 cut(s) 285, 765, 1259, 1295, 1589, 2234, 2247
BspTNI GGTCTC 1 cut(s) 802
BsrDI GCAATG 5 cut(s) 11, 1461, 1638, 2196, 2669
BsrGI TGTACA 4 cut(s) 241, 1692, 2140, 2986
BsrI ACTGG 6 cut(s) 264, 1339, 1576, 2572, 2904, 3076
BssECI CCNNGG 4 cut(s) 694, 1930, 2319, 2450
BssNI GRCGYC 1 cut(s) 437
BssSI CACGAG 1 cut(s) 2869
BssT1I CCWWGG 2 cut(s) 694, 2319
Bst2BI CACGAG 1 cut(s) 2869
Bst2UI CCWGG 4 cut(s) 1558, 1616, 1932, 2817
Bst4CI ACNGT 5 cut(s) 27, 1958, 2282, 2671, 2746
BstACI GRCGYC 1 cut(s) 437
BstAPI GCANNNNNTGC 2 cut(s) 47, 2207
BstAUI TGTACA 4 cut(s) 241, 1692, 2140, 2986
BstBAI YACGTR 3 cut(s) 728, 790, 1877
BstC8I GCNNGC 3 cut(s) 1425, 1612, 2560
BstDSI CCRYGG 1 cut(s) 694
BstH2I RGCGCY 1 cut(s) 644
BstHHI GCGC 3 cut(s) 173, 643, 1591
BstMAI GTCTC 5 cut(s) 148, 800, 802, 814, 1148
BstMCI CGRYCG 1 cut(s) 575
BstNI CCWGG 4 cut(s) 1558, 1616, 1932, 2817
BstNSI RCATGY 2 cut(s) 671, 2361
BstPAI GACNNNNGTC 1 cut(s) 2509
BstSCI CCNGG 6 cut(s) 1556, 1614, 1930, 2449, 2450, 2815
BstV1I GCAGC 6 cut(s) 439, 703, 1095, 2067, 2293, 2887
BstV2I GAAGAC 4 cut(s) 758, 1167, 2482, 2541
BstX2I RGATCY 5 cut(s) 277, 757, 1264, 1581, 2239
BstYI RGATCY 5 cut(s) 277, 757, 1264, 1581, 2239
BsuI GTATCC 2 cut(s) 1140, 1572
BsuRI GGCC 5 cut(s) 32, 699, 1172, 2066, 2917
BtgI CCRYGG 1 cut(s) 694
BtgZI GCGATG 1 cut(s) 2421
BtsI GCAGTG 2 cut(s) 2083, 2491
BtsIMutI CAGTG 7 cut(s) 257, 642, 1346, 1353, 2083, 2491, 2999
BveI ACCTGC 2 cut(s) 262, 2547
Cac8I GCNNGC 3 cut(s) 1425, 1612, 2560
CciI TCATGA 1 cut(s) 2095
CfoI GCGC 3 cut(s) 173, 643, 1591
Cfr13I GGNCC 8 cut(s) 31, 497, 698, 851, 1018, 1369, 2915, 3074
Cfr9I CCCGGG 1 cut(s) 2450
CseI GACGC 1 cut(s) 445
CsiI ACCWGGT 1 cut(s) 1556
CspCI CAANNNNNGTGG 6 cut(s) 1028, 1063, 2178, 2213, 2436, 2471
Ecl136II GAGCTC 2 cut(s) 1238, 1897
Eco130I CCWWGG 2 cut(s) 694, 2319
Eco147I AGGCCT 1 cut(s) 2066
Eco24I GRGCYC 3 cut(s) 690, 1240, 1899
Eco31I GGTCTC 1 cut(s) 802
Eco47I GGWCC 5 cut(s) 497, 851, 1018, 1369, 3074
Eco53kI GAGCTC 2 cut(s) 1238, 1897
Eco57I CTGAAG 1 cut(s) 2829
Eco72I CACGTG 2 cut(s) 728, 1877
Eco88I CYCGRG 2 cut(s) 345, 2450
EcoICRI GAGCTC 2 cut(s) 1238, 1897
EcoRII CCWGG 4 cut(s) 1556, 1614, 1930, 2815
EcoT14I CCWWGG 2 cut(s) 694, 2319
EcoT22I ATGCAT 1 cut(s) 1381
EcoT38I GRGCYC 3 cut(s) 690, 1240, 1899
ErhI CCWWGG 2 cut(s) 694, 2319
Esp3I CGTCTC 1 cut(s) 148
FalI AAGNNNNNCTT 2 cut(s) 1503, 1535
FaqI GGGAC 2 cut(s) 217, 323
FauI CCCGC 4 cut(s) 300, 1359, 2567, 2719
FauNDI CATATG 1 cut(s) 2372
FbaI TGATCA 2 cut(s) 2113, 2686
FblI GTMKAC 3 cut(s) 571, 2030, 2421
FriOI GRGCYC 3 cut(s) 690, 1240, 1899
FspBI CTAG 7 cut(s) 213, 378, 1307, 1566, 1611, 1686, 2481
FspI TGCGCA 1 cut(s) 172
GlaI GCGC 3 cut(s) 172, 642, 1590
GsaI CCCAGC 1 cut(s) 537
GsuI CTGGAG 1 cut(s) 281
HaeII RGCGCY 1 cut(s) 644
HaeIII GGCC 5 cut(s) 32, 699, 1172, 2066, 2917
HapII CCGG 4 cut(s) 1178, 2017, 2451, 3066
HgaI GACGC 1 cut(s) 445
HhaI GCGC 3 cut(s) 173, 643, 1591
Hin1I GRCGYC 1 cut(s) 437
Hin6I GCGC 3 cut(s) 171, 641, 1589
HinP1I GCGC 3 cut(s) 171, 641, 1589
HincII GTYRAC 4 cut(s) 352, 572, 2422, 2467
HindII GTYRAC 4 cut(s) 352, 572, 2422, 2467
HindIII AAGCTT 3 cut(s) 1357, 1658, 1833
HpaII CCGG 4 cut(s) 1178, 2017, 2451, 3066
HphI GGTGA 3 cut(s) 380, 1312, 2681
Hpy99I CGWCG 2 cut(s) 104, 918
HpyCH4III ACNGT 5 cut(s) 27, 1958, 2282, 2671, 2746
HpyCH4IV ACGT 6 cut(s) 727, 763, 789, 916, 1876, 2010
HpySE526I ACGT 6 cut(s) 727, 763, 789, 916, 1876, 2010
Hsp92I GRCGYC 1 cut(s) 437
HspAI GCGC 3 cut(s) 171, 641, 1589
Ksp22I TGATCA 2 cut(s) 2113, 2686
LmnI GCTCC 2 cut(s) 1201, 2659
Lsp1109I GCAGC 6 cut(s) 439, 703, 1095, 2067, 2293, 2887
LweI GCATC 6 cut(s) 925, 1410, 2545, 2780, 2794, 2887
MabI ACCWGGT 1 cut(s) 1556
MaeI CTAG 7 cut(s) 213, 378, 1307, 1566, 1611, 1686, 2481
MaeII ACGT 6 cut(s) 727, 763, 789, 916, 1876, 2010
MaeIII GTNAC 2 cut(s) 599, 2671
MflI RGATCY 5 cut(s) 277, 757, 1264, 1581, 2239
MhlI GDGCHC 4 cut(s) 690, 1240, 1320, 1899
MlyI GAGTC 4 cut(s) 256, 991, 2752, 2951
MmeI TCCRAC 3 cut(s) 36, 416, 1767
Mph1103I ATGCAT 1 cut(s) 1381
MroXI GAANNNNTTC 2 cut(s) 474, 1515
MslI CAYNNNNRTG 2 cut(s) 885, 2682
MspA1I CMGCKG 2 cut(s) 2714, 2891
MspI CCGG 4 cut(s) 1178, 2017, 2451, 3066
MspR9I CCNGG 6 cut(s) 1558, 1616, 1932, 2451, 2452, 2817
Mva1269I GAATGC 2 cut(s) 1035, 2458
MvaI CCWGG 4 cut(s) 1558, 1616, 1932, 2817
NciI CCSGG 2 cut(s) 2451, 2452
NcoI CCATGG 1 cut(s) 694
NdeI CATATG 1 cut(s) 2372
NheI GCTAGC 1 cut(s) 1610
NlaIV GGNNCC 6 cut(s) 700, 1020, 1197, 1370, 1928, 2241
NmuCI GTSAC 1 cut(s) 599
NsbI TGCGCA 1 cut(s) 172
NsiI ATGCAT 1 cut(s) 1381
NspI RCATGY 2 cut(s) 671, 2361
PaeR7I CTCGAG 1 cut(s) 345
PagI TCATGA 1 cut(s) 2095
PaqCI CACCTGC 1 cut(s) 262
PceI AGGCCT 1 cut(s) 2066
PcsI WCGNNNNNNNCGW 1 cut(s) 3020
PctI GAATGC 2 cut(s) 1035, 2458
PdmI GAANNNNTTC 2 cut(s) 474, 1515
PflMI CCANNNNNTGG 1 cut(s) 1749
PleI GAGTC 4 cut(s) 255, 990, 2752, 2951
PmaCI CACGTG 2 cut(s) 728, 1877
PmlI CACGTG 2 cut(s) 728, 1877
PpsI GAGTC 4 cut(s) 255, 990, 2752, 2951
Ppu21I YACGTR 3 cut(s) 728, 790, 1877
PshAI GACNNNNGTC 1 cut(s) 2509
PshBI ATTAAT 1 cut(s) 620
Psp124BI GAGCTC 2 cut(s) 1240, 1899
Psp1406I AACGTT 1 cut(s) 2010
Psp6I CCWGG 4 cut(s) 1556, 1614, 1930, 2815
PspCI CACGTG 2 cut(s) 728, 1877
PspFI CCCAGC 1 cut(s) 533
PspGI CCWGG 4 cut(s) 1556, 1614, 1930, 2815
PspN4I GGNNCC 6 cut(s) 700, 1020, 1197, 1370, 1928, 2241
PspPI GGNCC 8 cut(s) 31, 497, 698, 851, 1018, 1369, 2915, 3074
PspXI VCTCGAGB 1 cut(s) 345
PsuI RGATCY 5 cut(s) 277, 757, 1264, 1581, 2239
RseI CAYNNNNRTG 2 cut(s) 885, 2682
SacI GAGCTC 2 cut(s) 1240, 1899
SalI GTCGAC 2 cut(s) 570, 2420
Sau96I GGNCC 8 cut(s) 31, 497, 698, 851, 1018, 1369, 2915, 3074
SchI GAGTC 4 cut(s) 256, 991, 2752, 2951
ScrFI CCNGG 6 cut(s) 1558, 1616, 1932, 2451, 2452, 2817
SduI GDGCHC 4 cut(s) 690, 1240, 1320, 1899
SexAI ACCWGGT 1 cut(s) 1556
SfaNI GCATC 6 cut(s) 925, 1410, 2545, 2780, 2794, 2887
Sfr274I CTCGAG 1 cut(s) 345
SinI GGWCC 5 cut(s) 497, 851, 1018, 1369, 3074
SlaI CTCGAG 1 cut(s) 345
SmaI CCCGGG 1 cut(s) 2452
SmiMI CAYNNNNRTG 2 cut(s) 885, 2682
SmlI CTYRAG 1 cut(s) 345
SmoI CTYRAG 1 cut(s) 345
SseBI AGGCCT 1 cut(s) 2066
SspI AATATT 2 cut(s) 1763, 1858
SspMI CTAG 7 cut(s) 213, 378, 1307, 1566, 1611, 1686, 2481
SstI GAGCTC 2 cut(s) 1240, 1899
StuI AGGCCT 1 cut(s) 2066
StyD4I CCNGG 6 cut(s) 1556, 1614, 1930, 2449, 2450, 2815
StyI CCWWGG 2 cut(s) 694, 2319
TaaI ACNGT 5 cut(s) 27, 1958, 2282, 2671, 2746
TaiI ACGT 6 cut(s) 730, 766, 792, 919, 1879, 2013
TaqII GACCGA 1 cut(s) 589
TatI WGTACW 4 cut(s) 241, 1692, 2140, 2986
TauI GCSGC 4 cut(s) 421, 424, 427, 1631
TscAI CASTG 7 cut(s) 264, 642, 1346, 1353, 2090, 2491, 3006
TseFI GTSAC 1 cut(s) 599
TseI GCWGC 6 cut(s) 427, 716, 1083, 2080, 2306, 2900
Tsp45I GTSAC 1 cut(s) 599
TspGWI ACGGA 2 cut(s) 130, 1361
TspMI CCCGGG 1 cut(s) 2450
TspRI CASTG 7 cut(s) 264, 642, 1346, 1353, 2090, 2491, 3006
Van91I CCANNNNNTGG 1 cut(s) 1749
VpaK11BI GGWCC 5 cut(s) 497, 851, 1018, 1369, 3074
VspI ATTAAT 1 cut(s) 620
XapI RAATTY 1 cut(s) 398
XceI RCATGY 2 cut(s) 671, 2361
XcmI CCANNNNNNNNNTGG 2 cut(s) 515, 2326
XhoI CTCGAG 1 cut(s) 345
XmaI CCCGGG 1 cut(s) 2450
XmiI GTMKAC 3 cut(s) 571, 2030, 2421
XmnI GAANNNNTTC 2 cut(s) 474, 1515
XspI CTAG 7 cut(s) 213, 378, 1307, 1566, 1611, 1686, 2481
Zsp2I ATGCAT 1 cut(s) 1381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.