FvH4_5g11350

Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
6454934 .. 6459004
4071 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11350.t1

Sequence Viewer

Length: 2871 bp
ATGATGAGTTTCAAGTGCCCCAACTCTATTGTCGACCTCAACTCCTTTCGATTTTTCATGGACATGGGATCAGCTTCTAGGGTTATGCCATCCAACTATCAAAGACCAACCTCAAGCTTGTATCTTAAATATTCACGTGGTGCTTTGTCTTCGTTTAGCAGAGGAATTTATGCCCTAAGTGTCGACGCTTTTGAGGATATCAATTCTGGATTATGGGGTACGCATCTGCCGAAGAGCGACGCAACTTCTGCCAAGGTCATGAAATTCGATAATATACATTCTTCAACGAATATATATGCGATGATCTACTACAGAATTCTAATTCAGGTCAAATGGTTGTTGAAACTTTCAAAGATCCCAGAATTCACAGAGGTACCTAGTTTCAGTGAGCGTGCTGAGCGTTACTTGCAAGGAGTTATTGATGGATTTTGCATAATGGAAGCCATAGAAATGACAACGAGGTGCGAGAAGAAGACAAACCATGATTATGTTAGAGCTGTGGAATTCTTCTTGAAGCTGAGATGCATATCAATACCAGAGATAACTAAGGTGCTCGATACTTTCCAATTTGCTTCCACATCAGAGGATATAAACAGTCTTGCGCATGCGTTAATGTTAAAAGATGTCATGAACAATGTTGTGTTTCCTGTTATGGATGATCTGATCAAGGCAATAGCAACCTTGTCAAAGGACAATGCATCCATTCCAATTCTTTCTCGCAGGGAGGGATACAAGGTCTCACCCACAACTTTGGGCAAGGAATTGGCCAATTTTGCTGTCAGGCTAAGCATAGAGAGGCATAGAGCTTCTCAAGTGAAGATAATGGGGAAGTTTCCTGGTGCTGTTGGAAGTTCCAATGCTCATTATGTTATATATCCTCATATTAACTGGCCGCACATTGCTGAAGAGTTCATCACTTCTCTTGGAGTGACTTTCAATCCTTATGCTACTGAGGCCGAGACTTACGATTACATGCCAAAAATTTTCAATGCTATTAACCGATTCAATAGTATAGTGATCGACTTTGAAAAAGATATGAGTGACCACATGTATTTTGGTTACTTAAAGTCCAGAGGTTTTGATCTTAGTGAAGCAACTCTCGGTGCAGCTAGACAAGCTCTTTCCTACGTGACTAGTTTGTTGCCTAAATCTCGTTTTTTGGACGAGTTGACTGATTCTAGTATTCTGAGGAACATGAGTGAAGGATTAGTATGTTCTGTTATTGCGTACGAGTGGATATTTACGAATATAGCAAAGATTCAGATAGATGAAGCTCTCGCGAATGACGAGATGAACCACTCTCCGGCGGTGCTTGCTGAAGCAGTACAAGCTGTTATTCGAAGATATGGTGTTCCAGCAGAGACCTATGAGAAGCTTAAAGAACTAACAATGGGGAGAAGAGTTACCAAAAAAAGTCTAAGAAAGATTATTGAAGGCTTGGAATTACCTAAAGATCATCAAACCATTTTGTCAAGGCTAACACCACGTAGCTATGTTGGAGAAGATGTTAAATTTGCTAAAATGGTAGACATGGGAGTTAAAGCAGCTACTAGCAACATCAATAAAAGTGCAACGGCTTGGCCACAATTGGATGGTCTGTGTTGGGATAAATTCAAGGACTTGGCTCCTTATACGAGCGAGTATGGTCTAATCTACTTCATTGTTCTAGTTCAGATCAAATGGTTGCTATTGCTTTCAGAAATTCCTGAAGTGACTGAGGTACCGAGGTTTAGTAAATCCGCGCAATCTTATTTACAACAAATAATTGATGGATTTAACTTCAATGATGCATTTGAAGTAAAGAACCTTGTGAAAGTGGCAAAGGTCGACGAAGTAGCTGCGGTGGATCAGTTCATCAAAAAGAGATGTGGATCACATCCAGAAATAGCTAAGGTGGTTGAAGTTTTTCACTTTGCTTGTACATCTGAGGAGGTCAACAATCTTGCCCATGCACTAGTCCTAAAAGGAACCATGGATAAGGTCATATACCCTGCCATGGATGATCTGATTTATGCAATATGTGGCATTGCTAAGGACACTGCTCATATTCCTATTGTCTCTTCCACTCATGATGGACAGCCTGTAGCGTTTACAACTTTGGGAAAAGAAATGGCAACTTTTGCTGTGAGATTAAGCAGAGAACGGAAAGAGATTTCGCAACTGCAACTAAAGGGGAATCTGGGAGGTGAGGTTGGAAATTACAATGCTTATCTTGTTGCATATCCTGATATTAATTGGCCTCAAGTTGCTGAAGAGTTTGTCACGTCTCTGGGTTTGAGTTTTAATCCCTACGTTACTCGGATCAGAGCTTATGATTATGTGACAGAACTTGTTCATGGAGTTGGCCAGTTCAACAAGATATTGACGGACTTTGATGGAGAAGTACAAAGGTACATGAATATGGGCTGTTTTAAGCAAATAAACAAGGCTAGTGAAGGCAGTAACATTGGTGTGGCCAGTGGTAATCAGTGTTCCTTGAGCAGGAAGCTACCTATTTCAACTCTTTTAAGGAACATGGGTTCAAGATTAGAGCATTCTCTTGTCACCTACAAAAACACACTCGATCTAATATCAACACTTGAGGCGGTTGATGCAGGCACGATCAAGGAATACTTGAATCTCTATTCCGGAGCTCTCGTCGGAGAGTTAGAGACGGTTGTGCAAAGATATGGTGTCCCCGAGCCCTACGAAAAGTTGAAGGAACAAACCGGAGGAGAAGTAATAGTTACCAAGGAAAGTATAGTACATTTTATTCAAGCCATGGAAGTACCTGACGAAGCAAAGGTCATTCTACTTAATCTAACACAATGTAGCTACGTCGGAGCCGCTTCCGAATTGGCCAGAACAGTAGACATAGCCGTGAATTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

957

Amino Acids

107.14

Weight (kDa)

6.16

Isoelectric Point (pI)

34.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lyase_1 PF00206 126 - 346 4.3e-16 Lyase
ASL_C PF08328 384 - 499 1.7e-28 Adenylosuccinate lyase C-terminal
Lyase_1 PF00206 575 - 815 3e-23 Lyase
ASL_C PF08328 827 - 940 2.6e-17 Adenylosuccinate lyase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 603
Acc65I GGTACC 2 cut(s) 373, 1720
AccB1I GGYRCC 2 cut(s) 373, 1720
AccI GTMKAC 5 cut(s) 33, 183, 1527, 1827, 2850
AccII CGCG 2 cut(s) 1280, 1742
AccIII TCCGGA 1 cut(s) 2627
AciI CCGC 6 cut(s) 893, 1307, 1740, 1841, 2585, 2826
AclWI GGATC 5 cut(s) 76, 349, 1854, 1879, 2309
AcoI YGGCCR 6 cut(s) 765, 890, 1580, 2344, 2454, 2838
AcuI CTGAAG 4 cut(s) 924, 1338, 1728, 2271
AcvI CACGTG 1 cut(s) 137
AdeI CACNNNGTG 1 cut(s) 140
AfiI CCNNNNNNNGG 3 cut(s) 1303, 1996, 2481
AflIII ACRYGT 1 cut(s) 1047
AhlI ACTAGT 2 cut(s) 1133, 1954
AjiI CACGTC 1 cut(s) 2265
AjnI CCWGG 1 cut(s) 835
AloI GAACNNNNNNTCC 2 cut(s) 2503, 2535
Alw21I GWGCWC 2 cut(s) 555, 2635
Alw26I GTCTC 6 cut(s) 742, 953, 1355, 2062, 2271, 2645
AlwI GGATC 5 cut(s) 76, 349, 1854, 1879, 2309
Ama87I CYCGRG 1 cut(s) 2678
Aor13HI TCCGGA 1 cut(s) 2627
AoxI GGCC 8 cut(s) 765, 890, 954, 1580, 2237, 2344, 2454, 2838
ApeKI GCWGC 3 cut(s) 1106, 1544, 1838
ArsI GACNNNNNNTTYG 2 cut(s) 2769, 2801
AseI ATTAAT 1 cut(s) 2232
Asp700I GAANNNNTTC 2 cut(s) 1905, 2331
Asp718I GGTACC 2 cut(s) 373, 1720
AspLEI GCGC 2 cut(s) 604, 1744
AsuHPI GGTGA 3 cut(s) 732, 2198, 2536
AsuII TTCGAA 1 cut(s) 1339
AvaI CYCGRG 1 cut(s) 2678
BaeGI GKGCMC 1 cut(s) 20
BaeI ACNNNNGTAYC 6 cut(s) 357, 390, 1704, 1712, 1737, 1745
BalI TGGCCA 5 cut(s) 767, 1582, 2346, 2456, 2840
BanI GGYRCC 2 cut(s) 373, 1720
BanII GRGCYC 2 cut(s) 2635, 2685
BbrPI CACGTG 1 cut(s) 137
BbsI GAAGAC 2 cut(s) 141, 479
Bbv12I GWGCWC 2 cut(s) 555, 2635
BbvI GCAGC 3 cut(s) 1118, 1556, 1825
BccI CCATC 6 cut(s) 97, 416, 1586, 1763, 2066, 2369
BceAI ACGGC 2 cut(s) 1590, 2843
BcgI CGANNNNNNTGC 2 cut(s) 1820, 1854
BciT130I CCWGG 1 cut(s) 837
BciVI GTATCC 1 cut(s) 722
BclI TGATCA 1 cut(s) 663
BcoDI GTCTC 6 cut(s) 742, 953, 1355, 2062, 2271, 2645
BcuI ACTAGT 2 cut(s) 1133, 1954
BfaI CTAG 9 cut(s) 78, 378, 1110, 1134, 1179, 1551, 1667, 1955, 2430
BfmI CTRYAG 2 cut(s) 310, 2082
BfuI GTATCC 1 cut(s) 722
BisI GCNGC 5 cut(s) 893, 1107, 1545, 1839, 2826
BlpI GCTNAGC 2 cut(s) 396, 785
BlsI GCNGC 5 cut(s) 894, 1108, 1546, 1840, 2827
Bme1390I CCNGG 1 cut(s) 837
BmeT110I CYCGRG 1 cut(s) 2678
BmgBI CACGTC 1 cut(s) 2265
BmiI GGNNCC 5 cut(s) 375, 1626, 1722, 1969, 2824
BmrFI CCNGG 1 cut(s) 837
BmsI GCATC 5 cut(s) 232, 512, 707, 1777, 2581
BpiI GAAGAC 2 cut(s) 141, 479
Bpu10I CCTNAGC 2 cut(s) 1890, 2031
Bpu1102I GCTNAGC 2 cut(s) 396, 785
Bpu14I TTCGAA 1 cut(s) 1339
BpuEI CTTGAG 5 cut(s) 97, 795, 2226, 2497, 2600
BsaAI YACGTR 3 cut(s) 137, 1129, 1487
BsaBI GATNNNNATC 2 cut(s) 526, 1870
BsaI GGTCTC 2 cut(s) 742, 1355
BsaJI CCNNGG 6 cut(s) 252, 1724, 1971, 1995, 2730, 2760
BsaWI WCCGGW 2 cut(s) 2627, 2708
Bsc4I CCNNNNNNNGG 3 cut(s) 1303, 1996, 2481
Bse1I ACTGG 3 cut(s) 893, 2347, 2457
Bse3DI GCAATG 2 cut(s) 897, 2025
Bse8I GATNNNNATC 2 cut(s) 526, 1870
BseAI TCCGGA 1 cut(s) 2627
BseBI CCWGG 1 cut(s) 837
BseDI CCNNGG 6 cut(s) 252, 1724, 1971, 1995, 2730, 2760
BseGI GGATG 6 cut(s) 89, 661, 698, 1597, 1876, 2005
BseJI GATNNNNATC 2 cut(s) 526, 1870
BseLI CCNNNNNNNGG 3 cut(s) 1303, 1996, 2481
BseMI GCAATG 2 cut(s) 897, 2025
BseMII CTCAG 6 cut(s) 387, 509, 942, 1178, 1707, 1917
BseNI ACTGG 3 cut(s) 893, 2347, 2457
BseRI GAGGAG 2 cut(s) 1943, 2727
BseSI GKGCMC 1 cut(s) 20
BseXI GCAGC 3 cut(s) 1118, 1556, 1825
BsgI GTGCAG 1 cut(s) 1125
Bsh1236I CGCG 2 cut(s) 1280, 1742
BshFI GGCC 8 cut(s) 767, 892, 956, 1582, 2239, 2346, 2456, 2840
BshNI GGYRCC 2 cut(s) 373, 1720
BsiHKAI GWGCWC 2 cut(s) 555, 2635
BsiHKCI CYCGRG 1 cut(s) 2678
BsiSI CCGG 3 cut(s) 1304, 2628, 2709
BsiWI CGTACG 1 cut(s) 1227
BslFI GGGAC 1 cut(s) 2660
BslI CCNNNNNNNGG 3 cut(s) 1303, 1996, 2481
BsmAI GTCTC 6 cut(s) 742, 953, 1355, 2062, 2271, 2645
BsmBI CGTCTC 2 cut(s) 2271, 2645
BsmFI GGGAC 1 cut(s) 2660
BsmI GAATGC 1 cut(s) 2533
BsnI GGCC 8 cut(s) 767, 892, 956, 1582, 2239, 2346, 2456, 2840
Bso31I GGTCTC 2 cut(s) 742, 1355
BsoBI CYCGRG 1 cut(s) 2678
Bsp119I TTCGAA 1 cut(s) 1339
Bsp1286I GDGCHC 4 cut(s) 20, 555, 2635, 2685
Bsp13I TCCGGA 1 cut(s) 2627
Bsp1407I TGTACA 1 cut(s) 1919
Bsp1720I GCTNAGC 2 cut(s) 396, 785
Bsp19I CCATGG 3 cut(s) 1971, 1995, 2760
Bsp68I TCGCGA 1 cut(s) 1280
BspACI CCGC 6 cut(s) 893, 1307, 1740, 1841, 2585, 2826
BspANI GGCC 8 cut(s) 767, 892, 956, 1582, 2239, 2346, 2456, 2840
BspCNI CTCAG 6 cut(s) 388, 510, 943, 1179, 1708, 1918
BspEI TCCGGA 1 cut(s) 2627
BspFNI CGCG 2 cut(s) 1280, 1742
BspHI TCATGA 3 cut(s) 258, 627, 2068
BspLI GGNNCC 5 cut(s) 375, 1626, 1722, 1969, 2824
BspPI GGATC 5 cut(s) 76, 349, 1854, 1879, 2309
BspQI GCTCTTC 1 cut(s) 227
BspT104I TTCGAA 1 cut(s) 1339
BspT107I GGYRCC 2 cut(s) 373, 1720
BspTNI GGTCTC 2 cut(s) 742, 1355
BsrDI GCAATG 2 cut(s) 897, 2025
BsrGI TGTACA 1 cut(s) 1919
BsrI ACTGG 3 cut(s) 893, 2347, 2457
BssECI CCNNGG 6 cut(s) 252, 1724, 1971, 1995, 2730, 2760
BssT1I CCWWGG 5 cut(s) 252, 1971, 1995, 2730, 2760
Bst2UI CCWGG 1 cut(s) 837
Bst4CI ACNGT 3 cut(s) 596, 2656, 2848
Bst6I CTCTTC 5 cut(s) 227, 900, 1393, 2065, 2247
BstAPI GCANNNNNTGC 2 cut(s) 248, 2120
BstAUI TGTACA 1 cut(s) 1919
BstBAI YACGTR 3 cut(s) 137, 1129, 1487
BstBI TTCGAA 1 cut(s) 1339
BstC8I GCNNGC 4 cut(s) 393, 606, 1314, 2596
BstDSI CCRYGG 3 cut(s) 1971, 1995, 2760
BstENI CCTNNNNNAGG 1 cut(s) 2479
BstF5I GGATG 6 cut(s) 89, 661, 698, 1597, 1876, 2005
BstFNI CGCG 2 cut(s) 1280, 1742
BstHHI GCGC 2 cut(s) 604, 1744
BstMAI GTCTC 6 cut(s) 742, 953, 1355, 2062, 2271, 2645
BstNI CCWGG 1 cut(s) 837
BstNSI RCATGY 3 cut(s) 608, 976, 1051
BstSCI CCNGG 1 cut(s) 835
BstSFI CTRYAG 2 cut(s) 310, 2082
BstSLI GKGCMC 1 cut(s) 20
BstUI CGCG 2 cut(s) 1280, 1742
BstV1I GCAGC 3 cut(s) 1118, 1556, 1825
BstV2I GAAGAC 2 cut(s) 141, 479
BstX2I RGATCY 1 cut(s) 354
BstXI CCANNNNNNTGG 1 cut(s) 751
BstYI RGATCY 1 cut(s) 354
BsuI GTATCC 1 cut(s) 722
BsuRI GGCC 8 cut(s) 767, 892, 956, 1582, 2239, 2346, 2456, 2840
BtgI CCRYGG 3 cut(s) 1971, 1995, 2760
BtgZI GCGATG 1 cut(s) 314
BtrI CACGTC 1 cut(s) 2265
BtsCI GGATG 6 cut(s) 89, 661, 698, 1597, 1876, 2005
BtsI GCAGTG 1 cut(s) 2037
BtsIMutI CAGTG 4 cut(s) 391, 2037, 2464, 2474
BtuMI TCGCGA 1 cut(s) 1280
Cac8I GCNNGC 4 cut(s) 393, 606, 1314, 2596
CciI TCATGA 3 cut(s) 258, 627, 2068
CfoI GCGC 2 cut(s) 604, 1744
CseI GACGC 2 cut(s) 194, 248
DraIII CACNNNGTG 1 cut(s) 140
EaeI YGGCCR 6 cut(s) 765, 890, 1580, 2344, 2454, 2838
Eam1104I CTCTTC 5 cut(s) 227, 900, 1393, 2065, 2247
EarI CTCTTC 5 cut(s) 227, 900, 1393, 2065, 2247
Ecl136II GAGCTC 1 cut(s) 2633
Eco130I CCWWGG 5 cut(s) 252, 1971, 1995, 2730, 2760
Eco24I GRGCYC 2 cut(s) 2635, 2685
Eco31I GGTCTC 2 cut(s) 742, 1355
Eco32I GATATC 1 cut(s) 199
Eco53kI GAGCTC 1 cut(s) 2633
Eco57I CTGAAG 4 cut(s) 924, 1338, 1728, 2271
Eco72I CACGTG 1 cut(s) 137
Eco88I CYCGRG 1 cut(s) 2678
EcoICRI GAGCTC 1 cut(s) 2633
EcoNI CCTNNNNNAGG 1 cut(s) 2479
EcoRI GAATTC 4 cut(s) 315, 362, 503, 2863
EcoRII CCWGG 1 cut(s) 835
EcoRV GATATC 1 cut(s) 199
EcoT14I CCWWGG 5 cut(s) 252, 1971, 1995, 2730, 2760
EcoT22I ATGCAT 3 cut(s) 527, 700, 1792
EcoT38I GRGCYC 2 cut(s) 2635, 2685
ErhI CCWWGG 5 cut(s) 252, 1971, 1995, 2730, 2760
Esp3I CGTCTC 2 cut(s) 2271, 2645
FalI AAGNNNNNCTT 2 cut(s) 2597, 2629
FaqI GGGAC 1 cut(s) 2660
FbaI TGATCA 1 cut(s) 663
FblI GTMKAC 5 cut(s) 33, 183, 1527, 1827, 2850
Fnu4HI GCNGC 5 cut(s) 893, 1107, 1545, 1839, 2826
FokI GGATG 6 cut(s) 76, 668, 685, 1604, 1863, 2012
FriOI GRGCYC 2 cut(s) 2635, 2685
Fsp4HI GCNGC 5 cut(s) 893, 1107, 1545, 1839, 2826
FspBI CTAG 9 cut(s) 78, 378, 1110, 1134, 1179, 1551, 1667, 1955, 2430
FspI TGCGCA 1 cut(s) 603
GlaI GCGC 2 cut(s) 603, 1743
GluI GCNGC 5 cut(s) 893, 1107, 1545, 1839, 2826
HaeIII GGCC 8 cut(s) 767, 892, 956, 1582, 2239, 2346, 2456, 2840
HapII CCGG 3 cut(s) 1304, 2628, 2709
HgaI GACGC 2 cut(s) 194, 248
HhaI GCGC 2 cut(s) 604, 1744
Hin6I GCGC 2 cut(s) 602, 1742
HinP1I GCGC 2 cut(s) 602, 1742
HincII GTYRAC 5 cut(s) 34, 184, 1170, 1828, 1936
HindII GTYRAC 5 cut(s) 34, 184, 1170, 1828, 1936
HindIII AAGCTT 2 cut(s) 115, 1373
HinfI GANTC 5 cut(s) 1002, 1175, 1258, 2176, 2617
HpaII CCGG 3 cut(s) 1304, 2628, 2709
HphI GGTGA 3 cut(s) 732, 2198, 2536
Hpy166II GTNNAC 8 cut(s) 34, 184, 1170, 1528, 1828, 1936, 2091, 2851
Hpy8I GTNNAC 8 cut(s) 34, 184, 1170, 1528, 1828, 1936, 2091, 2851
Hpy99I CGWCG 5 cut(s) 188, 242, 1832, 2642, 2822
HpyAV CCTTC 4 cut(s) 1196, 1427, 2429, 2692
HpyCH4III ACNGT 3 cut(s) 596, 2656, 2848
HpyCH4IV ACGT 6 cut(s) 136, 1128, 1486, 2264, 2292, 2817
HpySE526I ACGT 6 cut(s) 136, 1128, 1486, 2264, 2292, 2817
HspAI GCGC 2 cut(s) 602, 1742
Kpn2I TCCGGA 1 cut(s) 2627
KpnI GGTACC 2 cut(s) 377, 1724
Ksp22I TGATCA 1 cut(s) 663
LguI GCTCTTC 1 cut(s) 227
LmnI GCTCC 3 cut(s) 1630, 2630, 2822
Lsp1109I GCAGC 3 cut(s) 1118, 1556, 1825
LweI GCATC 5 cut(s) 232, 512, 707, 1777, 2581
MaeI CTAG 9 cut(s) 78, 378, 1110, 1134, 1179, 1551, 1667, 1955, 2430
MaeII ACGT 6 cut(s) 136, 1128, 1486, 2264, 2292, 2817
MfeI CAATTG 1 cut(s) 1586
MflI RGATCY 1 cut(s) 354
MhlI GDGCHC 4 cut(s) 20, 555, 2635, 2685
MlsI TGGCCA 5 cut(s) 767, 1582, 2346, 2456, 2840
MluNI TGGCCA 5 cut(s) 767, 1582, 2346, 2456, 2840
MmeI TCCRAC 6 cut(s) 117, 826, 1477, 2173, 2620, 2800
Mox20I TGGCCA 5 cut(s) 767, 1582, 2346, 2456, 2840
Mph1103I ATGCAT 3 cut(s) 527, 700, 1792
MroI TCCGGA 1 cut(s) 2627
MroXI GAANNNNTTC 2 cut(s) 1905, 2331
MscI TGGCCA 5 cut(s) 767, 1582, 2346, 2456, 2840
MslI CAYNNNNRTG 6 cut(s) 62, 449, 486, 2399, 2450, 2858
Msp20I TGGCCA 5 cut(s) 767, 1582, 2346, 2456, 2840
MspI CCGG 3 cut(s) 1304, 2628, 2709
MspR9I CCNGG 1 cut(s) 837
MunI CAATTG 1 cut(s) 1586
Mva1269I GAATGC 1 cut(s) 2533
MvaI CCWGG 1 cut(s) 837
MvnI CGCG 2 cut(s) 1280, 1742
NcoI CCATGG 3 cut(s) 1971, 1995, 2760
NlaIV GGNNCC 5 cut(s) 375, 1626, 1722, 1969, 2824
NmeAIII GCCGAG 1 cut(s) 982
NmuCI GTSAC 7 cut(s) 928, 1040, 1129, 1711, 2260, 2320, 2542
NruI TCGCGA 1 cut(s) 1280
NsbI TGCGCA 1 cut(s) 603
NsiI ATGCAT 3 cut(s) 527, 700, 1792
NspI RCATGY 3 cut(s) 608, 976, 1051
NspV TTCGAA 1 cut(s) 1339
PaeI GCATGC 1 cut(s) 608
PagI TCATGA 3 cut(s) 258, 627, 2068
PciI ACATGT 1 cut(s) 1047
PciSI GCTCTTC 1 cut(s) 227
PcsI WCGNNNNNNNCGW 2 cut(s) 227, 1284
PctI GAATGC 1 cut(s) 2533
PdmI GAANNNNTTC 2 cut(s) 1905, 2331
PfeI GAWTC 5 cut(s) 1002, 1175, 1258, 2176, 2617
Pfl23II CGTACG 1 cut(s) 1227
PkrI GCNGC 5 cut(s) 894, 1108, 1546, 1840, 2827
PmaCI CACGTG 1 cut(s) 137
PmlI CACGTG 1 cut(s) 137
Ppu21I YACGTR 3 cut(s) 137, 1129, 1487
PscI ACATGT 1 cut(s) 1047
PshBI ATTAAT 1 cut(s) 2232
Psp124BI GAGCTC 1 cut(s) 2635
Psp6I CCWGG 1 cut(s) 835
PspCI CACGTG 1 cut(s) 137
PspGI CCWGG 1 cut(s) 835
PspLI CGTACG 1 cut(s) 1227
PspN4I GGNNCC 5 cut(s) 375, 1626, 1722, 1969, 2824
PsrI GAACNNNNNNTAC 2 cut(s) 2455, 2487
PsuI RGATCY 1 cut(s) 354
RruI TCGCGA 1 cut(s) 1280
RseI CAYNNNNRTG 6 cut(s) 62, 449, 486, 2399, 2450, 2858
SacI GAGCTC 1 cut(s) 2635
SalI GTCGAC 3 cut(s) 32, 182, 1826
SapI GCTCTTC 1 cut(s) 227
SatI GCNGC 5 cut(s) 893, 1107, 1545, 1839, 2826
ScrFI CCNGG 1 cut(s) 837
SduI GDGCHC 4 cut(s) 20, 555, 2635, 2685
SfaNI GCATC 5 cut(s) 232, 512, 707, 1777, 2581
SfcI CTRYAG 2 cut(s) 310, 2082
SfuI TTCGAA 1 cut(s) 1339
SmiMI CAYNNNNRTG 6 cut(s) 62, 449, 486, 2399, 2450, 2858
SmlI CTYRAG 5 cut(s) 112, 810, 2241, 2476, 2579
SmoI CTYRAG 5 cut(s) 112, 810, 2241, 2476, 2579
SpeI ACTAGT 2 cut(s) 1133, 1954
SphI GCATGC 1 cut(s) 608
SsiI CCGC 6 cut(s) 893, 1307, 1740, 1841, 2585, 2826
SspI AATATT 1 cut(s) 131
SspMI CTAG 9 cut(s) 78, 378, 1110, 1134, 1179, 1551, 1667, 1955, 2430
SstI GAGCTC 1 cut(s) 2635
StyD4I CCNGG 1 cut(s) 835
StyI CCWWGG 5 cut(s) 252, 1971, 1995, 2730, 2760
TaaI ACNGT 3 cut(s) 596, 2656, 2848
TaiI ACGT 6 cut(s) 139, 1131, 1489, 2267, 2295, 2820
TaqI TCGA 9 cut(s) 33, 49, 183, 267, 555, 1020, 1339, 1827, 2562
TatI WGTACW 4 cut(s) 1324, 1919, 2383, 2743
TauI GCSGC 2 cut(s) 895, 2828
TfiI GAWTC 5 cut(s) 1002, 1175, 1258, 2176, 2617
TscAI CASTG 4 cut(s) 391, 2044, 2464, 2474
TseFI GTSAC 7 cut(s) 928, 1040, 1129, 1711, 2260, 2320, 2542
TseI GCWGC 3 cut(s) 1106, 1544, 1838
Tsp45I GTSAC 7 cut(s) 928, 1040, 1129, 1711, 2260, 2320, 2542
TspGWI ACGGA 2 cut(s) 2158, 2381
TspRI CASTG 4 cut(s) 391, 2044, 2464, 2474
VspI ATTAAT 1 cut(s) 2232
XagI CCTNNNNNAGG 1 cut(s) 2479
XceI RCATGY 3 cut(s) 608, 976, 1051
XcmI CCANNNNNNNNNTGG 1 cut(s) 1052
XmiI GTMKAC 5 cut(s) 33, 183, 1527, 1827, 2850
XmnI GAANNNNTTC 2 cut(s) 1905, 2331
XspI CTAG 9 cut(s) 78, 378, 1110, 1134, 1179, 1551, 1667, 1955, 2430
Zsp2I ATGCAT 3 cut(s) 527, 700, 1792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.