MD04G1043000.v1.1

Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Reverse (-)
5059203 .. 5062817
3615 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1043000.v1.1.491

Sequence Viewer

Length: 3060 bp
ATGACCTTCCGATTCATCGACGTCGGAGCCTCTTCTCCTTCCTCTTCTTTTTCTTCTAGGGCTCCGAACTGCAACCAACTCTCCTGCTTCTTCAGTTCTGTGCCATCCAAAGCCCCATACCTTCATCGTTCTTCCAACACTTCTTCTTTGTCACTCTCTCGGAGCCGCATGGACTGCTCTCTAAGAGCCGCCATCGAAGATACCAATGGTACATGCCACGGCAAAGTCGAAATCGGGCATTCGATTTTGACGGCTTTGTCGCCGTTGGACGGCCGTTATTGGGGTAAAGTCAAGGAATTGGCTCCTTTTATGAGCGAATATGCCCTAATCTACTACAGAGTTTTCGTTGAGATAAAATGGCTGTTGAAACTTTCACAAATCCCTGAGGTCACAGAGGTGCCCAGTTTCAGTGGAGATGCTCAATCTTACTTGCAAGGAATCATCGATGGATTTAGCGTCGATGATGCAGCGGAAATAAAGAAGATTGAGAAAATTACTAATCATGATGTGAAAGCAGTGGAGTATTTTTTGAAACAGAAATGCAGTTCGCATCCAGAGATAGCTAAGGTGCTTGAGTTTTTCCATTTTGCTTGCACATCTGAGGACATCAACAATCTTGCTCATGCGTTGATGTTGAAAGATGCTATCAACAATGTTATGTTTCCCGTCATGGATGAGTTGGTTGAGGCAATTTGTGACATGTCAAAGGATAACGCGTCCGTTCCCATGCTTTCTCGCACGCACGGTCAGACTGCCTCACCCACCACTTTGGGGAAGGAAATGGCAATTTTCGCTGTCAGGTTAAGCATACAAAGGCGCAGAATTTCTCAGGTTGAAATCATGGGGAAGTTTGCTGGTGCAGTAGGAAATTACAATGCTCATCTTGTTGCATATCCTGATGTTGATTGGCCTCAGATTGCTGAAGAGTTTGTAACATCTCTTGGAGTGAGTTTTAATCCTTACGTTACTCAGATTGAGACTCATGACTATATGTCAAAAATTTTCAATGCCCTCAACCGTTTCAATAATATATTGATCGACTTTGATAGTGATATATGGCGCTACATATCTTTGGGTTACTTCAAGCAGACAACTAAGGCTGGTGAAATTGGGTCGTCAACAATGCCTCACAAAGTGAACCCTATTGATTTTGAAAATAGTGAAGGTAATCTTGGTTTTGCTGGTGGAAGTCTTTCCTACCTGAGTGAGAAGTTGCCTAAATCACGTTTGCAGCGTGACTTGACTGATTCTACTGTTCTGAGGAACATGGGTGTTGGATTAGGTCACTCTTTTCTTGCTTACAGAAGCACACTGCAGGGAATAGCAAAGCTACAGGTTAATGAAGCTCGCATGAGTGAAGAGTTGAACCAGTCTTGGGAGGTGCTTGCGGAAGCAGTACAAACTATTATGCGAAGATATAGTGTTCCTGAGCCTTATGAGAAGCTGAAGGAACTAACAAGAGGAAGAACAGTTACCAAAGAAAGTATAAGAGAGTTCATCAAAGGCTTGGAATTACCTGAAGAACCAAAGTCCATTTTATCAAAGCTGACACCGCATAGCTATGTTGGAGCAGCTGTTAAACTGGCCAGGACGGTGGATATGGCTGTTAGATACACCAGAAATAACACCAATGATAACACTGAGAGTGTGAAGATGGTGTCTGCTAAATCTTCTGGTGAATCTGAGCTTGTCAGTTTGATGGCGTTGTCACCATTGGATGGTCGGTATTGGGGTAAAGTCAAGGACTTGGCTCCGTACATGAGTGAGTATGGTTTGATCTATTTCCGTGTTCTAGTTGAGATCAAATGGTTGCTATGGCTTTCACAAATCCCTCAAGTCACAGAGGTACCTACCTTTAGTGAAAATGCTCGGTTGTATTTGCTAGAAATAATTGATGGATTTAGTAATAACGATGCATTAGAAATAAAGAAGATTGAGAGAGTGACAAACCATGACGTGAAGGCGGTGGAGTACTATTTGAAACAGAGATGCCAACCACATCCAGAAATAGCCAAGGTACTTGAATTTGTTCATTTTGCTTGCACGTCTGAGGACATCAACAACCTCGCACATGCATTGATGTTGAAAGGAGCCATGAATGATGTCATATATCCAGTCATGGATGATTTGATTGAGGCAATATGCAAAATGGCTAAAGACAATGCTCATATTTCTATGCTATCTCGTACTCACGGACAGCCTGCTTCACCCACAACTTTGGGAAAGGAAATGGCAAATTTTGCTGTCAGATTAAGAAGAGAAAGGCAAGAGATTTCTAGGGTGGAGATAATGGGGAAATTTGCTGGGGCTGTTGGAAATTACAATGCTCATCTTGTCGCCTATCCTGATGTTGATTGGCCTCAGATTGCTGAAGAGTTTGTAACATCTCTTGGATTGAGCTTTAATCCGTATGTCACGCAGATTGAACCTCACGACTACATGGCAGAACTCTTTCATGCAATTTGCCAGTTCAATACCATATTGATCGACTTTGATAGAGATATATGGGACTACATATCTTTGGGTTATTTCAAGCAAATAACTAAGGCCGGTGAGATTGGGTCATCAACGATGCCTCACAAGGTAAACCCTATTGATTTTGAAAACAGTGAAGGTAATCTCGGCGTGGCTAATGGGAATCTTTGTCATCTGAGCATGAAGTTACCAATTTCACGTTGGCAGCGTGACTTGACGGATTCAACTGTTTTGAGGAACATGGGTTTGGGATTGGGGCATTCTCTTCTTGCCTACAAAAGCACTCTTCAGGGAATATCAAAGCTTCAGGTCAACGAAGGTTGCATATCTGAGGACTTGAACCTTACCTGGGAAGTTCTTGCTGAACCAATACAGACGGTTATGCGAAGATACGGAGTTCCTGAGCCCTACGAGAAGTTGAAGGAACTAACCAGAGGAAGAGCTGTTACCAAGGAGAGTATAGTAGATTTTATACAAGGCCTGGAATTACCTAATGAAGCCAAGACCAATCTACTAAAGTTAACGCCGCATAGTTATGTCGGAGCAGCTGTTGAATTGGCTAGGACTGTTGATGTAGTCACGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1020

Amino Acids

114.36

Weight (kDa)

5.91

Isoelectric Point (pI)

42.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lyase_1 PF00206 130 - 389 8.2e-55 Lyase
ASL_C PF08328 408 - 522 7.3e-49 Adenylosuccinate lyase C-terminal
Lyase_1 PF00206 579 - 875 6.8e-56 Lyase
ASL_C PF08328 891 - 1005 1.7e-49 Adenylosuccinate lyase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 256
AatII GACGTC 1 cut(s) 24
Acc65I GGTACC 1 cut(s) 1846
AccB1I GGYRCC 2 cut(s) 397, 1846
AccB7I CCANNNNNTGG 1 cut(s) 1718
AccII CGCG 1 cut(s) 716
AciI CCGC 7 cut(s) 166, 189, 470, 1388, 1553, 1964, 3002
AcoI YGGCCR 2 cut(s) 271, 1584
AcsI RAATTY 5 cut(s) 822, 999, 2024, 2236, 2297
AcuI CTGAAG 7 cut(s) 76, 942, 1466, 1539, 2391, 2747, 2765
AcyI GRCGYC 1 cut(s) 21
AdeI CACNNNGTG 1 cut(s) 1135
AfaI GTAC 7 cut(s) 211, 1398, 1757, 1848, 1973, 2019, 2188
AfiI CCNNNNNNNGG 6 cut(s) 269, 280, 771, 1375, 1718, 2824
AflIII ACRYGT 2 cut(s) 699, 714
AhdI GACNNNNNGTC 1 cut(s) 991
AjiI CACGTC 2 cut(s) 1957, 2046
AjnI CCWGG 3 cut(s) 1586, 2822, 2955
AjuI GAANNNNNNNTTGG 4 cut(s) 1155, 1187, 2705, 2737
AleI CACNNNNGTG 1 cut(s) 395
Alw26I GTCTC 1 cut(s) 971
AoxI GGCC 6 cut(s) 271, 908, 1584, 2357, 2547, 2953
ApeKI GCWGC 5 cut(s) 467, 1231, 1571, 2680, 3020
ApoI RAATTY 5 cut(s) 822, 999, 2024, 2236, 2297
Asp700I GAANNNNTTC 3 cut(s) 1192, 2028, 2451
Asp718I GGTACC 1 cut(s) 1846
AspLEI GCGC 2 cut(s) 819, 1062
AsuHPI GGTGA 6 cut(s) 750, 1115, 1688, 1701, 2199, 2564
AxyI CCTNAGG 1 cut(s) 384
BaeGI GKGCMC 1 cut(s) 402
BaeI ACNNNNGTAYC 2 cut(s) 1830, 1863
BalI TGGCCA 1 cut(s) 1586
BanI GGYRCC 2 cut(s) 397, 1846
BanII GRGCYC 2 cut(s) 64, 2883
BarI GAAGNNNNNNTAC 4 cut(s) 1456, 1488, 2905, 2937
BbvI GCAGC 5 cut(s) 479, 1243, 1583, 2692, 3032
BccI CCATC 7 cut(s) 112, 200, 440, 1648, 1693, 1712, 1889
BceAI ACGGC 5 cut(s) 235, 247, 258, 267, 286
BciT130I CCWGG 3 cut(s) 1588, 2824, 2957
BcoDI GTCTC 1 cut(s) 971
BfaI CTAG 5 cut(s) 57, 1793, 1883, 2277, 3036
BfmI CTRYAG 3 cut(s) 334, 1313, 1331
BfoI RGCGCY 1 cut(s) 1063
BisI GCNGC 8 cut(s) 166, 189, 468, 1232, 1572, 2681, 3002, 3021
BlsI GCNGC 8 cut(s) 167, 190, 469, 1233, 1573, 2682, 3003, 3022
BmcAI AGTACT 1 cut(s) 1973
Bme1390I CCNGG 3 cut(s) 1588, 2824, 2957
BmeRI GACNNNNNGTC 1 cut(s) 991
BmgBI CACGTC 2 cut(s) 1957, 2046
BmiI GGNNCC 8 cut(s) 28, 63, 164, 303, 399, 1752, 1848, 2092
BmrFI CCNGG 3 cut(s) 1588, 2824, 2957
BmrI ACTGGG 1 cut(s) 396
BmsI GCATC 7 cut(s) 406, 454, 559, 631, 1903, 1979, 2562
BmuI ACTGGG 1 cut(s) 396
Bpu10I CCTNAGC 3 cut(s) 564, 1428, 2877
BpuEI CTTGAG 2 cut(s) 593, 1818
Bsa29I ATCGAT 1 cut(s) 444
BsaAI YACGTR 1 cut(s) 3057
BsaHI GRCGYC 1 cut(s) 21
BsaJI CCNNGG 4 cut(s) 217, 2013, 2823, 2925
BsaXI ACNNNNNCTCC 6 cut(s) 65, 95, 1560, 1590, 3009, 3039
Bsc4I CCNNNNNNNGG 6 cut(s) 269, 280, 771, 1375, 1718, 2824
Bse118I RCCGGY 1 cut(s) 2549
Bse1I ACTGG 5 cut(s) 402, 1369, 1587, 2114, 2467
Bse21I CCTNAGG 1 cut(s) 384
BseBI CCWGG 3 cut(s) 1588, 2824, 2957
BseCI ATCGAT 1 cut(s) 444
BseDI CCNNGG 4 cut(s) 217, 2013, 2823, 2925
BseGI GGATG 6 cut(s) 104, 550, 679, 1723, 1999, 2128
BseLI CCNNNNNNNGG 6 cut(s) 269, 280, 771, 1375, 1718, 2824
BseNI ACTGG 5 cut(s) 402, 1369, 1587, 2114, 2467
BseSI GKGCMC 1 cut(s) 402
BseX3I CGGCCG 1 cut(s) 271
BseXI GCAGC 5 cut(s) 479, 1243, 1583, 2692, 3032
BseYI CCCAGC 1 cut(s) 2303
BsgI GTGCAG 1 cut(s) 879
Bsh1236I CGCG 1 cut(s) 716
Bsh1285I CGRYCG 1 cut(s) 274
BshFI GGCC 6 cut(s) 273, 910, 1586, 2359, 2549, 2955
BshNI GGYRCC 2 cut(s) 397, 1846
BshVI ATCGAT 1 cut(s) 444
BsiEI CGRYCG 1 cut(s) 274
BsiSI CCGG 1 cut(s) 2550
BslFI GGGAC 1 cut(s) 2522
BslI CCNNNNNNNGG 6 cut(s) 269, 280, 771, 1375, 1718, 2824
BsmAI GTCTC 1 cut(s) 971
BsmFI GGGAC 1 cut(s) 2522
BsmI GAATGC 2 cut(s) 238, 2734
BsnI GGCC 6 cut(s) 273, 910, 1586, 2359, 2549, 2955
Bsp1286I GDGCHC 3 cut(s) 64, 402, 2883
Bsp143I GATC 4 cut(s) 1035, 1776, 1800, 2484
BspACI CCGC 7 cut(s) 166, 189, 470, 1388, 1553, 1964, 3002
BspANI GGCC 6 cut(s) 273, 910, 1586, 2359, 2549, 2955
BspDI ATCGAT 1 cut(s) 444
BspFNI CGCG 1 cut(s) 716
BspHI TCATGA 2 cut(s) 502, 982
BspLI GGNNCC 8 cut(s) 28, 63, 164, 303, 399, 1752, 1848, 2092
BspMAI CTGCAG 1 cut(s) 1317
BspQI GCTCTTC 1 cut(s) 2908
BspT107I GGYRCC 2 cut(s) 397, 1846
BsrFI RCCGGY 1 cut(s) 2549
BsrI ACTGG 5 cut(s) 402, 1369, 1587, 2114, 2467
BssAI RCCGGY 1 cut(s) 2549
BssECI CCNNGG 4 cut(s) 217, 2013, 2823, 2925
BssMI GATC 4 cut(s) 1035, 1776, 1800, 2484
BssNI GRCGYC 1 cut(s) 21
BssT1I CCWWGG 2 cut(s) 2013, 2925
Bst2UI CCWGG 3 cut(s) 1588, 2824, 2957
Bst4CI ACNGT 9 cut(s) 746, 1019, 1255, 1471, 1594, 2609, 2704, 2854, 3043
Bst6I CTCTTC 9 cut(s) 37, 49, 918, 1353, 2251, 2367, 2745, 2766, 2908
BstACI GRCGYC 1 cut(s) 21
BstAPI GCANNNNNTGC 2 cut(s) 174, 2240
BstBAI YACGTR 1 cut(s) 3057
BstC8I GCNNGC 6 cut(s) 592, 740, 1348, 1386, 2041, 2202
BstDSI CCRYGG 1 cut(s) 217
BstF5I GGATG 6 cut(s) 104, 550, 679, 1723, 1999, 2128
BstFNI CGCG 1 cut(s) 716
BstH2I RGCGCY 1 cut(s) 1063
BstHHI GCGC 2 cut(s) 819, 1062
BstKTI GATC 4 cut(s) 1038, 1779, 1803, 2487
BstMAI GTCTC 1 cut(s) 971
BstMBI GATC 4 cut(s) 1035, 1776, 1800, 2484
BstMCI CGRYCG 1 cut(s) 274
BstMWI GCNNNNNNNGC 4 cut(s) 174, 791, 1552, 2240
BstNI CCWGG 3 cut(s) 1588, 2824, 2957
BstNSI RCATGY 3 cut(s) 216, 703, 2075
BstSCI CCNGG 3 cut(s) 1586, 2822, 2955
BstSFI CTRYAG 3 cut(s) 334, 1313, 1331
BstSLI GKGCMC 1 cut(s) 402
BstUI CGCG 1 cut(s) 716
BstV1I GCAGC 5 cut(s) 479, 1243, 1583, 2692, 3032
BstXI CCANNNNNNTGG 3 cut(s) 769, 1594, 2218
BstZI CGGCCG 1 cut(s) 271
Bsu15I ATCGAT 1 cut(s) 444
Bsu36I CCTNAGG 1 cut(s) 384
BsuRI GGCC 6 cut(s) 273, 910, 1586, 2359, 2549, 2955
BsuTUI ATCGAT 1 cut(s) 444
BtgI CCRYGG 1 cut(s) 217
BtrI CACGTC 2 cut(s) 1957, 2046
BtsCI GGATG 6 cut(s) 104, 550, 679, 1723, 1999, 2128
BtsI GCAGTG 2 cut(s) 522, 1310
BtsIMutI CAGTG 5 cut(s) 415, 522, 1310, 1638, 2614
Cac8I GCNNGC 6 cut(s) 592, 740, 1348, 1386, 2041, 2202
CciI TCATGA 2 cut(s) 502, 982
CfoI GCGC 2 cut(s) 819, 1062
Cfr10I RCCGGY 1 cut(s) 2549
ClaI ATCGAT 1 cut(s) 444
CseI GACGC 2 cut(s) 445, 705
Csp6I GTAC 7 cut(s) 210, 1397, 1756, 1847, 1972, 2018, 2187
CviQI GTAC 7 cut(s) 210, 1397, 1756, 1847, 1972, 2018, 2187
DpnI GATC 4 cut(s) 1037, 1778, 1802, 2486
DpnII GATC 4 cut(s) 1035, 1776, 1800, 2484
DraIII CACNNNGTG 1 cut(s) 1135
DrdI GACNNNNNNGTC 1 cut(s) 256
DriI GACNNNNNGTC 1 cut(s) 991
DseDI GACNNNNNNGTC 1 cut(s) 256
EaeI YGGCCR 2 cut(s) 271, 1584
EagI CGGCCG 1 cut(s) 271
Eam1104I CTCTTC 9 cut(s) 37, 49, 918, 1353, 2251, 2367, 2745, 2766, 2908
Eam1105I GACNNNNNGTC 1 cut(s) 991
EarI CTCTTC 9 cut(s) 37, 49, 918, 1353, 2251, 2367, 2745, 2766, 2908
EclXI CGGCCG 1 cut(s) 271
Eco130I CCWWGG 2 cut(s) 2013, 2925
Eco147I AGGCCT 1 cut(s) 2955
Eco24I GRGCYC 2 cut(s) 64, 2883
Eco52I CGGCCG 1 cut(s) 271
Eco57I CTGAAG 7 cut(s) 76, 942, 1466, 1539, 2391, 2747, 2765
Eco81I CCTNAGG 1 cut(s) 384
EcoRII CCWGG 3 cut(s) 1586, 2822, 2955
EcoT14I CCWWGG 2 cut(s) 2013, 2925
EcoT22I ATGCAT 2 cut(s) 1918, 2077
EcoT38I GRGCYC 2 cut(s) 64, 2883
ErhI CCWWGG 2 cut(s) 2013, 2925
FalI AAGNNNNNCTT 2 cut(s) 1155, 1187
FaqI GGGAC 1 cut(s) 2522
Fnu4HI GCNGC 8 cut(s) 166, 189, 468, 1232, 1572, 2681, 3002, 3021
FokI GGATG 6 cut(s) 91, 537, 686, 1730, 1986, 2135
FriOI GRGCYC 2 cut(s) 64, 2883
Fsp4HI GCNGC 8 cut(s) 166, 189, 468, 1232, 1572, 2681, 3002, 3021
FspBI CTAG 5 cut(s) 57, 1793, 1883, 2277, 3036
GlaI GCGC 2 cut(s) 818, 1061
GluI GCNGC 8 cut(s) 166, 189, 468, 1232, 1572, 2681, 3002, 3021
GsaI CCCAGC 1 cut(s) 2307
HaeII RGCGCY 1 cut(s) 1063
HaeIII GGCC 6 cut(s) 273, 910, 1586, 2359, 2549, 2955
HapII CCGG 1 cut(s) 2550
HgaI GACGC 2 cut(s) 445, 705
HhaI GCGC 2 cut(s) 819, 1062
Hin1I GRCGYC 1 cut(s) 21
Hin6I GCGC 2 cut(s) 817, 1060
HinP1I GCGC 2 cut(s) 817, 1060
HincII GTYRAC 3 cut(s) 1119, 2788, 2997
HindII GTYRAC 3 cut(s) 1119, 2788, 2997
HindIII AAGCTT 1 cut(s) 2777
HinfI GANTC 7 cut(s) 12, 438, 979, 1247, 1679, 2638, 2696
HpaI GTTAAC 1 cut(s) 2997
HpaII CCGG 1 cut(s) 2550
HphI GGTGA 6 cut(s) 750, 1115, 1688, 1701, 2199, 2564
Hpy166II GTNNAC 5 cut(s) 1119, 1138, 2587, 2788, 2997
Hpy188III TCNNGA 9 cut(s) 503, 554, 896, 983, 1427, 2003, 2345, 2432, 2876
Hpy8I GTNNAC 5 cut(s) 1119, 1138, 2587, 2788, 2997
Hpy99I CGWCG 3 cut(s) 23, 26, 461
HpyCH4III ACNGT 9 cut(s) 746, 1019, 1255, 1471, 1594, 2609, 2704, 2854, 3043
HpyCH4IV ACGT 7 cut(s) 21, 963, 1225, 1956, 2045, 2674, 3056
HpyF10VI GCNNNNNNNGC 4 cut(s) 174, 791, 1552, 2240
HpySE526I ACGT 7 cut(s) 21, 963, 1225, 1956, 2045, 2674, 3056
Hsp92I GRCGYC 1 cut(s) 21
HspAI GCGC 2 cut(s) 817, 1060
KpnI GGTACC 1 cut(s) 1850
KspAI GTTAAC 1 cut(s) 2997
Kzo9I GATC 4 cut(s) 1035, 1776, 1800, 2484
LguI GCTCTTC 1 cut(s) 2908
LmnI GCTCC 8 cut(s) 26, 67, 162, 307, 1568, 1756, 2090, 3017
Lsp1109I GCAGC 5 cut(s) 479, 1243, 1583, 2692, 3032
LweI GCATC 7 cut(s) 406, 454, 559, 631, 1903, 1979, 2562
MaeI CTAG 5 cut(s) 57, 1793, 1883, 2277, 3036
MaeII ACGT 7 cut(s) 21, 963, 1225, 1956, 2045, 2674, 3056
MalI GATC 4 cut(s) 1037, 1778, 1802, 2486
MboI GATC 4 cut(s) 1035, 1776, 1800, 2484
MhlI GDGCHC 3 cut(s) 64, 402, 2883
MlsI TGGCCA 1 cut(s) 1586
MluI ACGCGT 1 cut(s) 714
MluNI TGGCCA 1 cut(s) 1586
MlyI GAGTC 1 cut(s) 973
MmeI TCCRAC 7 cut(s) 4, 159, 246, 1255, 1546, 2293, 2995
Mox20I TGGCCA 1 cut(s) 1586
Mph1103I ATGCAT 2 cut(s) 1918, 2077
MroXI GAANNNNTTC 3 cut(s) 1192, 2028, 2451
MscI TGGCCA 1 cut(s) 1586
MseI TTAA 7 cut(s) 803, 954, 1338, 1578, 2252, 2403, 2996
MslI CAYNNNNRTG 3 cut(s) 395, 1560, 3009
Msp20I TGGCCA 1 cut(s) 1586
MspA1I CMGCKG 3 cut(s) 470, 1574, 3023
MspI CCGG 1 cut(s) 2550
MspR9I CCNGG 3 cut(s) 1588, 2824, 2957
Mva1269I GAATGC 2 cut(s) 238, 2734
MvaI CCWGG 3 cut(s) 1588, 2824, 2957
MvnI CGCG 1 cut(s) 716
MwoI GCNNNNNNNGC 4 cut(s) 174, 791, 1552, 2240
NdeII GATC 4 cut(s) 1035, 1776, 1800, 2484
NlaIV GGNNCC 8 cut(s) 28, 63, 164, 303, 399, 1752, 1848, 2092
NmeAIII GCCGAG 1 cut(s) 2601
NsiI ATGCAT 2 cut(s) 1918, 2077
NspI RCATGY 3 cut(s) 216, 703, 2075
OliI CACNNNNGTG 1 cut(s) 395
PagI TCATGA 2 cut(s) 502, 982
PceI AGGCCT 1 cut(s) 2955
PciI ACATGT 1 cut(s) 699
PciSI GCTCTTC 1 cut(s) 2908
PcsI WCGNNNNNNNCGW 3 cut(s) 225, 1231, 2680
PctI GAATGC 2 cut(s) 238, 2734
PdmI GAANNNNTTC 3 cut(s) 1192, 2028, 2451
PfeI GAWTC 6 cut(s) 12, 438, 1247, 1679, 2638, 2696
PflMI CCANNNNNTGG 1 cut(s) 1718
PkrI GCNGC 8 cut(s) 167, 190, 469, 1233, 1573, 2682, 3003, 3022
PleI GAGTC 1 cut(s) 973
PpsI GAGTC 1 cut(s) 973
Ppu21I YACGTR 1 cut(s) 3057
PscI ACATGT 1 cut(s) 699
Psp6I CCWGG 3 cut(s) 1586, 2822, 2955
PspFI CCCAGC 1 cut(s) 2303
PspGI CCWGG 3 cut(s) 1586, 2822, 2955
PspN4I GGNNCC 8 cut(s) 28, 63, 164, 303, 399, 1752, 1848, 2092
PstI CTGCAG 1 cut(s) 1317
PvuII CAGCTG 2 cut(s) 1574, 3023
RsaI GTAC 7 cut(s) 211, 1398, 1757, 1848, 1973, 2019, 2188
RsaNI GTAC 7 cut(s) 210, 1397, 1756, 1847, 1972, 2018, 2187
RseI CAYNNNNRTG 3 cut(s) 395, 1560, 3009
SapI GCTCTTC 1 cut(s) 2908
SaqAI TTAA 7 cut(s) 803, 954, 1338, 1578, 2252, 2403, 2996
SatI GCNGC 8 cut(s) 166, 189, 468, 1232, 1572, 2681, 3002, 3021
Sau3AI GATC 4 cut(s) 1035, 1776, 1800, 2484
ScaI AGTACT 1 cut(s) 1973
SchI GAGTC 1 cut(s) 973
ScrFI CCNGG 3 cut(s) 1588, 2824, 2957
SduI GDGCHC 3 cut(s) 64, 402, 2883
SfaNI GCATC 7 cut(s) 406, 454, 559, 631, 1903, 1979, 2562
SfcI CTRYAG 3 cut(s) 334, 1313, 1331
SmiMI CAYNNNNRTG 3 cut(s) 395, 1560, 3009
SmlI CTYRAG 2 cut(s) 572, 1833
SmoI CTYRAG 2 cut(s) 572, 1833
SseBI AGGCCT 1 cut(s) 2955
SsiI CCGC 7 cut(s) 166, 189, 470, 1388, 1553, 1964, 3002
SspMI CTAG 5 cut(s) 57, 1793, 1883, 2277, 3036
StuI AGGCCT 1 cut(s) 2955
StyD4I CCNGG 3 cut(s) 1586, 2822, 2955
StyI CCWWGG 2 cut(s) 2013, 2925
TaaI ACNGT 9 cut(s) 746, 1019, 1255, 1471, 1594, 2609, 2704, 2854, 3043
TaiI ACGT 7 cut(s) 24, 966, 1228, 1959, 2048, 2677, 3059
TaqI TCGA 8 cut(s) 18, 195, 228, 242, 444, 459, 1038, 2487
TatI WGTACW 2 cut(s) 1396, 1971
TauI GCSGC 3 cut(s) 168, 191, 3004
TfiI GAWTC 6 cut(s) 12, 438, 1247, 1679, 2638, 2696
Tru1I TTAA 7 cut(s) 803, 954, 1338, 1578, 2252, 2403, 2996
Tru9I TTAA 7 cut(s) 803, 954, 1338, 1578, 2252, 2403, 2996
TscAI CASTG 5 cut(s) 415, 522, 1317, 1645, 2614
TseI GCWGC 5 cut(s) 467, 1231, 1571, 2680, 3020
TspDTI ATGAA 9 cut(s) 4, 113, 1356, 1486, 2021, 2111, 2444, 2672, 2985
TspGWI ACGGA 7 cut(s) 709, 1743, 1775, 2208, 2397, 2708, 2883
TspRI CASTG 5 cut(s) 415, 522, 1317, 1645, 2614
Van91I CCANNNNNTGG 1 cut(s) 1718
XapI RAATTY 5 cut(s) 822, 999, 2024, 2236, 2297
XceI RCATGY 3 cut(s) 216, 703, 2075
XcmI CCANNNNNNNNNTGG 1 cut(s) 2673
XmnI GAANNNNTTC 3 cut(s) 1192, 2028, 2451
XspI CTAG 5 cut(s) 57, 1793, 1883, 2277, 3036
ZraI GACGTC 1 cut(s) 22
ZrmI AGTACT 1 cut(s) 1973
Zsp2I ATGCAT 2 cut(s) 1918, 2077
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.