Rh7BG082100

Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
5924417 .. 5929035
4619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG082100.1

Sequence Viewer

Length: 2883 bp
ATGATGAGTTCCAAGTGTCCCAACTCTATTGTCGACCTCAACTCCTTTCGATTTTTCATGGACATGGGATCATCTTCTAGGGTTATGCCACCCAAATATCAAAGACCAACCTCAAGCTTGTATCTTCATTCACGTGATGCTTTGTCTTCCTTTGGCAGAGGAATTTGTGCCCTAAGGGACACTGCTGCTGAAGATTTCAATTTTTCATGGGCGATCGGGAATAGTATGCATCTGCGGACAGACGCATGTTATGCCAAGGTCATGAAATTCGGTGAACTATCTTCTTCAACGGGTGAATATGCGATGATCTACTACAGAATTCTAGTTCAGGTCAAATGGTTGTTGAAACTTTCAGAGATCCCAGAATTCAGAGACGTACCTAGTTTCAGTGAGCATGCTCAGTGTTACTTACAAGGAATTATTGATCGATTTTGCATGGTGGAAGCCATAGAAATGACAGAGAGGTTGGAGAAAAAAACAAACCATGATCATGTTAAAGCAGTGGAATACTTCTTGAAGCTGAGATGCAGATCAAGACCAGAGATAGCTAAGGTGCTCGATACTTTTCATTTTGCTTGCACATCAGAGGACATCAACAGTCTTGCGCATACGTTAATGTTAAAAGATGCTGTGAACAATGTTATATTTCCTGTCATGGACGATCTGATCAAGGCAATGTCTACCATGTCAAGGGACAATGCTTCCATTCCAATTCTTTCTCGCAGGGACGGAAACACGGTCTCACCCACAACTTTGGGGAAGGAAATGGCCAATTTTGCTGTCAGGCTAAGCATACAGAGGCACAAACTTTCTCAAGTGAAGATAATGGGGAAGTTTCCTGGTGCTGTAGGAAGTTCCAATGCTCATTATGTTACATATCCTCATATTAATTGGCCGCAAATTGCTGAGGAATTCGTGACTTCTCTTGGAGTGAGTTTCAATCCTTATGTTACTGAGGCCGAGACTTACGACTACATGCCAAAACTTTTCAATGCTATTAACCGATTCAATAGTATATTGATCGACTTTGATAAAGATATGTGGGACTACTTACATTTTGGTTACTTCAAGCAAAGTGAGTATATAAATTTTCATTATAGTGAAGCAACTCTTGGTGCAGCTAGAGAAGCTCTTTCCTACCTGATTAGTTTGTTGCCTAGATCTCGTTTTCTGGAAGACTTGACTGATTCTAGTATTCGGAGGAACATGAGTAAAGGATTAGTATGTTCTGCTCTTGCCTACAAGAGTACACTTAAGAATATAGCAAAGATTCAGATTGATGAAGCTCTCGTGAGTGAGGAGTTGAACTACCACTCTTGGGAGGTACTTGCTGAAGCAGTACAAGCTGTAATTCGAAGATATGGTGTTCCTGCAGAGACCTATGAGAAGCTTAAAGAACTAACAACGGGGAGAAGGGTTACCAAAAAGAGTGTAAGAAAGTTTATTGAAGGCTTGGAATTACCTAAAGATCATAAGAGCATTTTGTCAAAGCTAACCCCACATAGCTATGTTGAAGAAGATGTTAAATTCGCTAAAATGGTAGACAGGGGAGTTAAAGCAGCTATAAGAAACACCAATATCAGTGCAACCGCTGGGCCACAATTGGATGTTCTGTGTACGGGTAAATTCAAGGACTTGGCTCCTTATATGAGTGAGTATGGTCTAATCTACTTCCGTGTTCTAGTTAAGATCAAATGGTTGTTACTGCTTTCAGAAATTCCTGAAGTGACAGAGGTACCTAGGTTTAGTAAATCTGCTCAATCTTATTTGCAAGAAATAATTGATGGATTTAACATCGATGATGCATTTGAAGTAAAGAACCTTGAGAAAGTGGCAAACGACGGTGTAGCTGCGGTGGAGCGGTTCATGAAACAGAGATGTGAATCACATCCAGAAATAGCTAAGGTGGTTGGATTTTTTAATTTTGCTTGCACATCTGAGGAGGTCAACAATCTTGCTCATGCACTAATCCTAAAAGGAACCATGGACAAGGTCATATTTCCTGCCATGGATGATTTGATTCATGCAATATGTGGCATTGCTAAGAACACTGCTCATATTCCTATTCTCTCTTCCACTCATGGACGGCCTGTTGCGTTTACAACTTTGGGGAAAGAAATGGCAAGTTTTGCTGTGAGATTAAGCAGAGAACGGAAAGAGATTTCGCAGCTGGAGCTAATGGGGAATCTCGGAGGTGAGGTTGGAAATTACAGTGCTTATCATGTTGCATATCCTGGTATTAATTGGCCTCAAGTTGCTGAACAGTTTGTAACATCTCTGGGTTTGAGTTTTAATCCCTATGTTACCCGGATCAGAGCTTATGATTATGTGGCAGAACTTGTTCATGGCGTTAGCCAGTTCAACAAGATATTGACGGACTTTGATGGAGACGTAGAAGGCTACATGTCTATGGGTTGTTTTAAGCAAATAAACAAGACTAGTGAAGGCATTAACATTGGTGCGGCCAGTGGCAATCTGTGTTCCCTGAGCAGGAAGCTACCTATTTCAACTCTTTTGAGGAACATGGGGTCAAGATTAGAGCATTCTCTTGTCACCTACAAAAACACACTAGATCTAATATCAAGACTCGAGGTGGTCGATATAGATTGCCCGATTGAGGACTACTTGAACCTCTATTCCGGAGCTCTCGTTAAAGAGTTAGAGACGGTAGTGCAAAGATATGGTGTCCCCAAGCCCTATGAAAAATTTAAGGAACTAACCGGAGGACGAGCAGTCATTACCAAGGAAAGTATACTGGATTTTATTCAACGCTTGGAAGTACCTAACGAAGCAAAAACCATTCTACTCAAGTTAACACGATGTAGCTACGTCGGAGCCGCTTCGGAATTGGCCAGAACAGTAGACATCGCCGTGAATTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

960

Amino Acids

108.22

Weight (kDa)

7.3

Isoelectric Point (pI)

41.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lyase_1 PF00206 160 - 359 2.5e-21 Lyase
ASL_C PF08328 388 - 504 6.2e-33 Adenylosuccinate lyase C-terminal
Lyase_1 PF00206 577 - 815 3.7e-26 Lyase
ASL_C PF08328 830 - 944 1.1e-17 Adenylosuccinate lyase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 606
Acc65I GGTACC 1 cut(s) 1735
AccB1I GGYRCC 1 cut(s) 1735
AccBSI CCGCTC 1 cut(s) 1861
AccI GTMKAC 5 cut(s) 33, 680, 1542, 2752, 2862
AccIII TCCGGA 1 cut(s) 2639
AciI CCGC 7 cut(s) 235, 896, 1590, 1853, 1861, 2462, 2838
AclWI GGATC 3 cut(s) 76, 352, 2318
AcoI YGGCCR 4 cut(s) 768, 893, 2463, 2850
AcuI CTGAAG 3 cut(s) 210, 1353, 1743
AcvI CACGTG 1 cut(s) 134
AfaI GTAC 7 cut(s) 378, 1249, 1326, 1341, 1618, 1737, 2781
AfiI CCNNNNNNNGG 4 cut(s) 690, 1318, 2490, 2617
AflII CTTAAG 1 cut(s) 1253
AflIII ACRYGT 1 cut(s) 2403
AhdI GACNNNNNGTC 1 cut(s) 2732
AhlI ACTAGT 1 cut(s) 2438
AjnI CCWGG 2 cut(s) 838, 2233
AjuI GAANNNNNNNTTGG 2 cut(s) 1095, 1127
AloI GAACNNNNNNTCC 2 cut(s) 2621, 2653
Alw21I GWGCWC 2 cut(s) 558, 2647
Alw26I GTCTC 6 cut(s) 366, 745, 956, 1370, 2382, 2657
AlwI GGATC 3 cut(s) 76, 352, 2318
Ama87I CYCGRG 1 cut(s) 2588
Aor13HI TCCGGA 1 cut(s) 2639
AoxI GGCC 8 cut(s) 768, 893, 957, 1595, 2087, 2246, 2463, 2850
ApeKI GCWGC 5 cut(s) 185, 1118, 1559, 1850, 2167
AseI ATTAAT 2 cut(s) 888, 2241
Asp700I GAANNNNTTC 1 cut(s) 2340
Asp718I GGTACC 1 cut(s) 1735
AspA2I CCTAGG 1 cut(s) 1739
AspLEI GCGC 1 cut(s) 607
AspS9I GGNCC 1 cut(s) 1595
AsuC2I CCSGG 1 cut(s) 2308
AsuHPI GGTGA 5 cut(s) 284, 305, 735, 2207, 2545
AsuII TTCGAA 1 cut(s) 1354
AvaI CYCGRG 1 cut(s) 2588
AvrII CCTAGG 1 cut(s) 1739
AxyI CCTNAGG 1 cut(s) 173
BaeGI GKGCMC 1 cut(s) 172
BaeI ACNNNNGTAYC 4 cut(s) 1719, 1727, 1752, 1760
BalI TGGCCA 2 cut(s) 770, 2852
BanI GGYRCC 1 cut(s) 1735
BanII GRGCYC 1 cut(s) 2647
BauI CACGAG 1 cut(s) 1289
BbrPI CACGTG 1 cut(s) 134
BbsI GAAGAC 2 cut(s) 138, 1182
Bbv12I GWGCWC 2 cut(s) 558, 2647
BbvCI CCTCAGC 1 cut(s) 906
BbvI GCAGC 5 cut(s) 172, 1130, 1571, 1837, 2179
BccI CCATC 2 cut(s) 1778, 2378
BceAI ACGGC 2 cut(s) 2102, 2855
BciT130I CCWGG 2 cut(s) 840, 2235
BclI TGATCA 2 cut(s) 487, 666
BcnI CCSGG 1 cut(s) 2308
BcoDI GTCTC 6 cut(s) 366, 745, 956, 1370, 2382, 2657
BcuI ACTAGT 1 cut(s) 2438
BfmI CTRYAG 3 cut(s) 313, 846, 1371
BfrI CTTAAG 1 cut(s) 1253
BglII AGATCT 2 cut(s) 1160, 2572
BisI GCNGC 8 cut(s) 186, 896, 1119, 1560, 1851, 2168, 2463, 2838
BlnI CCTAGG 1 cut(s) 1739
BlpI GCTNAGC 1 cut(s) 788
BlsI GCNGC 8 cut(s) 187, 897, 1120, 1561, 1852, 2169, 2464, 2839
Bme1390I CCNGG 3 cut(s) 840, 2235, 2308
BmeRI GACNNNNNGTC 1 cut(s) 2732
BmeT110I CYCGRG 1 cut(s) 2588
BmgT120I GGNCC 1 cut(s) 1595
BmiI GGNNCC 4 cut(s) 1641, 1737, 1981, 2836
BmrFI CCNGG 3 cut(s) 840, 2235, 2308
BmsI GCATC 5 cut(s) 127, 238, 515, 616, 1792
BpiI GAAGAC 2 cut(s) 138, 1182
BpmI CTGGAG 1 cut(s) 2192
Bpu10I CCTNAGC 4 cut(s) 549, 906, 1902, 2486
Bpu1102I GCTNAGC 1 cut(s) 788
Bpu14I TTCGAA 1 cut(s) 1354
BpuEI CTTGAG 5 cut(s) 97, 798, 1844, 2235, 2792
BpuMI CCSGG 1 cut(s) 2308
Bsa29I ATCGAT 2 cut(s) 427, 1797
BsaAI YACGTR 1 cut(s) 134
BsaBI GATNNNNATC 2 cut(s) 529, 1882
BsaI GGTCTC 2 cut(s) 745, 1370
BsaJI CCNNGG 5 cut(s) 255, 1739, 1983, 2007, 2742
BsaWI WCCGGW 2 cut(s) 2639, 2720
BsaXI ACNNNNNCTCC 6 cut(s) 26, 56, 2184, 2214, 2634, 2664
Bsc4I CCNNNNNNNGG 4 cut(s) 690, 1318, 2490, 2617
Bse1I ACTGG 3 cut(s) 2356, 2466, 2760
Bse21I CCTNAGG 1 cut(s) 173
Bse3DI GCAATG 2 cut(s) 681, 2037
Bse8I GATNNNNATC 2 cut(s) 529, 1882
BseAI TCCGGA 1 cut(s) 2639
BseBI CCWGG 2 cut(s) 840, 2235
BseCI ATCGAT 2 cut(s) 427, 1797
BseDI CCNNGG 5 cut(s) 255, 1739, 1983, 2007, 2742
BseGI GGATG 3 cut(s) 1612, 1888, 2017
BseJI GATNNNNATC 2 cut(s) 529, 1882
BseLI CCNNNNNNNGG 4 cut(s) 690, 1318, 2490, 2617
BseMI GCAATG 2 cut(s) 681, 2037
BseMII CTCAG 6 cut(s) 413, 512, 897, 945, 1929, 2477
BseNI ACTGG 3 cut(s) 2356, 2466, 2760
BseRI GAGGAG 2 cut(s) 1313, 1955
BseSI GKGCMC 1 cut(s) 172
BseXI GCAGC 5 cut(s) 172, 1130, 1571, 1837, 2179
BseYI CCCAGC 1 cut(s) 1592
BsgI GTGCAG 1 cut(s) 1137
Bsh1285I CGRYCG 1 cut(s) 216
BshFI GGCC 8 cut(s) 770, 895, 959, 1597, 2089, 2248, 2465, 2852
BshNI GGYRCC 1 cut(s) 1735
BshVI ATCGAT 2 cut(s) 427, 1797
BsiEI CGRYCG 1 cut(s) 216
BsiHKAI GWGCWC 2 cut(s) 558, 2647
BsiHKCI CYCGRG 1 cut(s) 2588
BsiSI CCGG 3 cut(s) 2308, 2640, 2721
BslFI GGGAC 6 cut(s) 3, 191, 707, 740, 1058, 2672
BslI CCNNNNNNNGG 4 cut(s) 690, 1318, 2490, 2617
BsmAI GTCTC 6 cut(s) 366, 745, 956, 1370, 2382, 2657
BsmBI CGTCTC 3 cut(s) 366, 2382, 2657
BsmFI GGGAC 6 cut(s) 3, 191, 707, 740, 1058, 2672
BsmI GAATGC 1 cut(s) 2542
BsnI GGCC 8 cut(s) 770, 895, 959, 1597, 2089, 2248, 2465, 2852
Bso31I GGTCTC 2 cut(s) 745, 1370
BsoBI CYCGRG 1 cut(s) 2588
Bsp119I TTCGAA 1 cut(s) 1354
Bsp1286I GDGCHC 3 cut(s) 172, 558, 2647
Bsp13I TCCGGA 1 cut(s) 2639
Bsp1720I GCTNAGC 1 cut(s) 788
Bsp19I CCATGG 2 cut(s) 1983, 2007
BspACI CCGC 7 cut(s) 235, 896, 1590, 1853, 1861, 2462, 2838
BspANI GGCC 8 cut(s) 770, 895, 959, 1597, 2089, 2248, 2465, 2852
BspCNI CTCAG 6 cut(s) 412, 513, 898, 946, 1930, 2478
BspDI ATCGAT 2 cut(s) 427, 1797
BspEI TCCGGA 1 cut(s) 2639
BspHI TCATGA 2 cut(s) 261, 1866
BspLI GGNNCC 4 cut(s) 1641, 1737, 1981, 2836
BspMAI CTGCAG 1 cut(s) 1375
BspPI GGATC 3 cut(s) 76, 352, 2318
BspT104I TTCGAA 1 cut(s) 1354
BspT107I GGYRCC 1 cut(s) 1735
BspTI CTTAAG 1 cut(s) 1253
BspTNI GGTCTC 2 cut(s) 745, 1370
BsrBI CCGCTC 1 cut(s) 1861
BsrDI GCAATG 2 cut(s) 681, 2037
BsrI ACTGG 3 cut(s) 2356, 2466, 2760
BssECI CCNNGG 5 cut(s) 255, 1739, 1983, 2007, 2742
BssNAI GTATAC 1 cut(s) 2753
BssSI CACGAG 1 cut(s) 1289
BssT1I CCWWGG 5 cut(s) 255, 1739, 1983, 2007, 2742
Bst1107I GTATAC 1 cut(s) 2753
Bst2BI CACGAG 1 cut(s) 1289
Bst2UI CCWGG 2 cut(s) 840, 2235
Bst4CI ACNGT 7 cut(s) 599, 739, 1844, 2213, 2265, 2668, 2860
Bst6I CTCTTC 1 cut(s) 2077
BstAFI CTTAAG 1 cut(s) 1253
BstAPI GCANNNNNTGC 2 cut(s) 251, 2129
BstBAI YACGTR 1 cut(s) 134
BstBI TTCGAA 1 cut(s) 1354
BstC8I GCNNGC 3 cut(s) 396, 577, 1930
BstDSI CCRYGG 2 cut(s) 1983, 2007
BstEII GGTNACC 1 cut(s) 1417
BstF5I GGATG 3 cut(s) 1612, 1888, 2017
BstHHI GCGC 1 cut(s) 607
BstMAI GTCTC 6 cut(s) 366, 745, 956, 1370, 2382, 2657
BstMCI CGRYCG 1 cut(s) 216
BstMWI GCNNNNNNNGC 6 cut(s) 251, 776, 1127, 1343, 2129, 2173
BstNI CCWGG 2 cut(s) 840, 2235
BstNSI RCATGY 4 cut(s) 249, 398, 979, 2407
BstPI GGTNACC 1 cut(s) 1417
BstSCI CCNGG 3 cut(s) 838, 2233, 2306
BstSFI CTRYAG 3 cut(s) 313, 846, 1371
BstSLI GKGCMC 1 cut(s) 172
BstV1I GCAGC 5 cut(s) 172, 1130, 1571, 1837, 2179
BstV2I GAAGAC 2 cut(s) 138, 1182
BstX2I RGATCY 3 cut(s) 357, 1160, 2572
BstXI CCANNNNNNTGG 1 cut(s) 754
BstYI RGATCY 3 cut(s) 357, 1160, 2572
BstZ17I GTATAC 1 cut(s) 2753
Bsu15I ATCGAT 2 cut(s) 427, 1797
Bsu36I CCTNAGG 1 cut(s) 173
BsuRI GGCC 8 cut(s) 770, 895, 959, 1597, 2089, 2248, 2465, 2852
BsuTUI ATCGAT 2 cut(s) 427, 1797
BtgI CCRYGG 2 cut(s) 1983, 2007
BtgZI GCGATG 2 cut(s) 317, 2851
BtsCI GGATG 3 cut(s) 1612, 1888, 2017
BtsI GCAGTG 3 cut(s) 180, 507, 2049
BtsIMutI CAGTG 8 cut(s) 180, 394, 407, 507, 1588, 2049, 2218, 2473
Cac8I GCNNGC 3 cut(s) 396, 577, 1930
CciI TCATGA 2 cut(s) 261, 1866
CfoI GCGC 1 cut(s) 607
Cfr13I GGNCC 1 cut(s) 1595
ClaI ATCGAT 2 cut(s) 427, 1797
CseI GACGC 1 cut(s) 251
Csp6I GTAC 7 cut(s) 377, 1248, 1325, 1340, 1617, 1736, 2780
CviQI GTAC 7 cut(s) 377, 1248, 1325, 1340, 1617, 1736, 2780
DriI GACNNNNNGTC 1 cut(s) 2732
EaeI YGGCCR 4 cut(s) 768, 893, 2463, 2850
Eam1104I CTCTTC 1 cut(s) 2077
Eam1105I GACNNNNNGTC 1 cut(s) 2732
EarI CTCTTC 1 cut(s) 2077
Ecl136II GAGCTC 1 cut(s) 2645
Eco130I CCWWGG 5 cut(s) 255, 1739, 1983, 2007, 2742
Eco24I GRGCYC 1 cut(s) 2647
Eco31I GGTCTC 2 cut(s) 745, 1370
Eco53kI GAGCTC 1 cut(s) 2645
Eco57I CTGAAG 3 cut(s) 210, 1353, 1743
Eco72I CACGTG 1 cut(s) 134
Eco81I CCTNAGG 1 cut(s) 173
Eco88I CYCGRG 1 cut(s) 2588
Eco91I GGTNACC 1 cut(s) 1417
EcoICRI GAGCTC 1 cut(s) 2645
EcoO65I GGTNACC 1 cut(s) 1417
EcoRI GAATTC 4 cut(s) 318, 365, 911, 2875
EcoRII CCWGG 2 cut(s) 838, 2233
EcoT14I CCWWGG 5 cut(s) 255, 1739, 1983, 2007, 2742
EcoT22I ATGCAT 2 cut(s) 231, 1807
EcoT38I GRGCYC 1 cut(s) 2647
ErhI CCWWGG 5 cut(s) 255, 1739, 1983, 2007, 2742
Esp3I CGTCTC 3 cut(s) 366, 2382, 2657
FalI AAGNNNNNCTT 2 cut(s) 1095, 1127
FaqI GGGAC 6 cut(s) 3, 191, 707, 740, 1058, 2672
FbaI TGATCA 2 cut(s) 487, 666
FblI GTMKAC 5 cut(s) 33, 680, 1542, 2752, 2862
Fnu4HI GCNGC 8 cut(s) 186, 896, 1119, 1560, 1851, 2168, 2463, 2838
FokI GGATG 3 cut(s) 1619, 1875, 2024
FriOI GRGCYC 1 cut(s) 2647
Fsp4HI GCNGC 8 cut(s) 186, 896, 1119, 1560, 1851, 2168, 2463, 2838
FspI TGCGCA 1 cut(s) 606
GlaI GCGC 1 cut(s) 606
GluI GCNGC 8 cut(s) 186, 896, 1119, 1560, 1851, 2168, 2463, 2838
GsaI CCCAGC 1 cut(s) 1596
GsuI CTGGAG 1 cut(s) 2192
HaeIII GGCC 8 cut(s) 770, 895, 959, 1597, 2089, 2248, 2465, 2852
HapII CCGG 3 cut(s) 2308, 2640, 2721
HgaI GACGC 1 cut(s) 251
HhaI GCGC 1 cut(s) 607
Hin6I GCGC 1 cut(s) 605
HinP1I GCGC 1 cut(s) 605
HincII GTYRAC 3 cut(s) 34, 1948, 2814
HindII GTYRAC 3 cut(s) 34, 1948, 2814
HindIII AAGCTT 2 cut(s) 115, 1388
HinfI GANTC 7 cut(s) 1005, 1187, 1270, 1883, 2020, 2185, 2586
HpaI GTTAAC 1 cut(s) 2814
HpaII CCGG 3 cut(s) 2308, 2640, 2721
HphI GGTGA 5 cut(s) 284, 305, 735, 2207, 2545
Hpy99I CGWCG 2 cut(s) 1844, 2834
HpyAV CCTTC 5 cut(s) 754, 1407, 1442, 2390, 2438
HpyCH4III ACNGT 7 cut(s) 599, 739, 1844, 2213, 2265, 2668, 2860
HpyCH4IV ACGT 5 cut(s) 133, 375, 611, 2391, 2829
HpyF10VI GCNNNNNNNGC 6 cut(s) 251, 776, 1127, 1343, 2129, 2173
HpySE526I ACGT 5 cut(s) 133, 375, 611, 2391, 2829
HspAI GCGC 1 cut(s) 605
Kpn2I TCCGGA 1 cut(s) 2639
KpnI GGTACC 1 cut(s) 1739
Ksp22I TGATCA 2 cut(s) 487, 666
KspAI GTTAAC 1 cut(s) 2814
LmnI GCTCC 5 cut(s) 1645, 1858, 2173, 2642, 2834
Lsp1109I GCAGC 5 cut(s) 172, 1130, 1571, 1837, 2179
LweI GCATC 5 cut(s) 127, 238, 515, 616, 1792
MaeII ACGT 5 cut(s) 133, 375, 611, 2391, 2829
MbiI CCGCTC 1 cut(s) 1861
MfeI CAATTG 1 cut(s) 1601
MflI RGATCY 3 cut(s) 357, 1160, 2572
MhlI GDGCHC 3 cut(s) 172, 558, 2647
MlsI TGGCCA 2 cut(s) 770, 2852
MluNI TGGCCA 2 cut(s) 770, 2852
MlyI GAGTC 1 cut(s) 2580
MmeI TCCRAC 4 cut(s) 447, 1891, 2182, 2812
Mox20I TGGCCA 2 cut(s) 770, 2852
Mph1103I ATGCAT 2 cut(s) 231, 1807
MroI TCCGGA 1 cut(s) 2639
MroXI GAANNNNTTC 1 cut(s) 2340
MscI TGGCCA 2 cut(s) 770, 2852
MslI CAYNNNNRTG 8 cut(s) 62, 132, 452, 489, 1098, 1506, 2408, 2870
Msp20I TGGCCA 2 cut(s) 770, 2852
MspA1I CMGCKG 2 cut(s) 1592, 2170
MspCI CTTAAG 1 cut(s) 1253
MspI CCGG 3 cut(s) 2308, 2640, 2721
MspR9I CCNGG 3 cut(s) 840, 2235, 2308
MunI CAATTG 1 cut(s) 1601
Mva1269I GAATGC 1 cut(s) 2542
MvaI CCWGG 2 cut(s) 840, 2235
MwoI GCNNNNNNNGC 6 cut(s) 251, 776, 1127, 1343, 2129, 2173
NciI CCSGG 1 cut(s) 2308
NcoI CCATGG 2 cut(s) 1983, 2007
NlaIV GGNNCC 4 cut(s) 1641, 1737, 1981, 2836
NmeAIII GCCGAG 1 cut(s) 985
NmuCI GTSAC 3 cut(s) 916, 1726, 2551
NsbI TGCGCA 1 cut(s) 606
NsiI ATGCAT 2 cut(s) 231, 1807
NspI RCATGY 4 cut(s) 249, 398, 979, 2407
NspV TTCGAA 1 cut(s) 1354
PaeI GCATGC 1 cut(s) 398
PaeR7I CTCGAG 1 cut(s) 2588
PagI TCATGA 2 cut(s) 261, 1866
PciI ACATGT 1 cut(s) 2403
PcsI WCGNNNNNNNCGW 1 cut(s) 2595
PctI GAATGC 1 cut(s) 2542
PdmI GAANNNNTTC 1 cut(s) 2340
PfeI GAWTC 6 cut(s) 1005, 1187, 1270, 1883, 2020, 2185
PflFI GACNNNGTC 1 cut(s) 1991
PkrI GCNGC 8 cut(s) 187, 897, 1120, 1561, 1852, 2169, 2464, 2839
Ple19I CGATCG 1 cut(s) 216
PleI GAGTC 1 cut(s) 2580
PmaCI CACGTG 1 cut(s) 134
PmlI CACGTG 1 cut(s) 134
PpsI GAGTC 1 cut(s) 2580
Ppu21I YACGTR 1 cut(s) 134
PscI ACATGT 1 cut(s) 2403
PshBI ATTAAT 2 cut(s) 888, 2241
Psp124BI GAGCTC 1 cut(s) 2647
Psp6I CCWGG 2 cut(s) 838, 2233
PspCI CACGTG 1 cut(s) 134
PspEI GGTNACC 1 cut(s) 1417
PspFI CCCAGC 1 cut(s) 1592
PspGI CCWGG 2 cut(s) 838, 2233
PspN4I GGNNCC 4 cut(s) 1641, 1737, 1981, 2836
PspPI GGNCC 1 cut(s) 1595
PspXI VCTCGAGB 1 cut(s) 2588
PstI CTGCAG 1 cut(s) 1375
PsuI RGATCY 3 cut(s) 357, 1160, 2572
PsyI GACNNNGTC 1 cut(s) 1991
PvuI CGATCG 1 cut(s) 216
PvuII CAGCTG 1 cut(s) 2170
RsaI GTAC 7 cut(s) 378, 1249, 1326, 1341, 1618, 1737, 2781
RsaNI GTAC 7 cut(s) 377, 1248, 1325, 1340, 1617, 1736, 2780
RseI CAYNNNNRTG 8 cut(s) 62, 132, 452, 489, 1098, 1506, 2408, 2870
SacI GAGCTC 1 cut(s) 2647
SalI GTCGAC 1 cut(s) 32
SatI GCNGC 8 cut(s) 186, 896, 1119, 1560, 1851, 2168, 2463, 2838
Sau96I GGNCC 1 cut(s) 1595
SchI GAGTC 1 cut(s) 2580
ScrFI CCNGG 3 cut(s) 840, 2235, 2308
SduI GDGCHC 3 cut(s) 172, 558, 2647
SfaNI GCATC 5 cut(s) 127, 238, 515, 616, 1792
SfcI CTRYAG 3 cut(s) 313, 846, 1371
Sfr274I CTCGAG 1 cut(s) 2588
SfuI TTCGAA 1 cut(s) 1354
SlaI CTCGAG 1 cut(s) 2588
SmiMI CAYNNNNRTG 8 cut(s) 62, 132, 452, 489, 1098, 1506, 2408, 2870
SmlI CTYRAG 7 cut(s) 112, 813, 1253, 1823, 2250, 2588, 2807
SmoI CTYRAG 7 cut(s) 112, 813, 1253, 1823, 2250, 2588, 2807
SpeI ACTAGT 1 cut(s) 2438
SphI GCATGC 1 cut(s) 398
SsiI CCGC 7 cut(s) 235, 896, 1590, 1853, 1861, 2462, 2838
SstI GAGCTC 1 cut(s) 2647
StyD4I CCNGG 3 cut(s) 838, 2233, 2306
StyI CCWWGG 5 cut(s) 255, 1739, 1983, 2007, 2742
TaaI ACNGT 7 cut(s) 599, 739, 1844, 2213, 2265, 2668, 2860
TaiI ACGT 5 cut(s) 136, 378, 614, 2394, 2832
TaqI TCGA 9 cut(s) 33, 49, 427, 558, 1023, 1354, 1797, 2589, 2598
TatI WGTACW 2 cut(s) 1247, 1339
TauI GCSGC 3 cut(s) 898, 2465, 2840
TfiI GAWTC 6 cut(s) 1005, 1187, 1270, 1883, 2020, 2185
TscAI CASTG 8 cut(s) 187, 394, 407, 507, 1588, 2056, 2218, 2473
TseFI GTSAC 3 cut(s) 916, 1726, 2551
TseI GCWGC 5 cut(s) 185, 1118, 1559, 1850, 2167
Tsp45I GTSAC 3 cut(s) 916, 1726, 2551
TspGWI ACGGA 4 cut(s) 744, 1664, 2167, 2390
TspRI CASTG 8 cut(s) 187, 394, 407, 507, 1588, 2056, 2218, 2473
Tth111I GACNNNGTC 1 cut(s) 1991
Vha464I CTTAAG 1 cut(s) 1253
VspI ATTAAT 2 cut(s) 888, 2241
XceI RCATGY 4 cut(s) 249, 398, 979, 2407
XhoI CTCGAG 1 cut(s) 2588
XmaJI CCTAGG 1 cut(s) 1739
XmiI GTMKAC 5 cut(s) 33, 680, 1542, 2752, 2862
XmnI GAANNNNTTC 1 cut(s) 2340
Zsp2I ATGCAT 2 cut(s) 231, 1807
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.