RchiOBHm_Chr7g0186531

Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
6423661 .. 6427205
3545 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16650

Sequence Viewer

Length: 2784 bp
ATGGACATGGGATCATCTTCTAGTGTTATGCCACCCAAATATCAAAGACCAACCTCAAGCTTGTATCTTCATTCACGTGATGCTTTGTCTTCCTTTGGCAGAGGAATTTGTGCCCTAAGGGACACTGATGCTGAAGATTTCAACTTTTCATGGGCGATCGGGAATAGTATGCATCTGCGGACAGACGCAAGTTATGCCAAGGTCATGAAATTCGGTGAACTATCTTCTTCAACGGGTGAATATGCGATGATCTACTACAGAATTCTAGTTCAGGTCAAATGGTTGTTGAAACTTTCAGAGATCCCAGAATTCAGAGACGTACCTAGTTTCAGTGAGCATGCTCAGTGTTACTTACAAGGAATTATTGATCGATTTTGCATGGTGGAAGCCATAGAAATGACAGAGAGGTTGGAGAAAAAAACAAACCATGATCATGTTAAAGCAGTGGAATACTTCTTGAAGCTGAGATGCAGATCAAGACCAGAGATAGCTAAGGTGCTCGATACTTTTCATTTTGCTTGCACATCAGAGGACATCAACAGTCTTGCGCATACGTTAATGTTAAAAGATGCTATGAACAATGTTATATTTCCTGTCATGGACGATCTGATCAAGGCAATGTCTACCATGTCAAGGGACAATGCTTCCATTCCAATTCTTTCTCGCAGGGACGGAAACACGGTCTCACCCACAACTTTGGGGAAGGAAATGGCCAATTTTGCTGTCAGGCTAGGCATACAGAAGCACAAACTTTCTCAAGTGAAGATAATGGGGAAGTTTCCTGGTGCTGTAGGAAGTTCCAATGCTCATTATGTTACATATCCTCATATTAATTGGCCGCAAATTGCTGAGGAATTCGTGACTTCTCTTGGAGTGAGTTTCAATCCTTATGTTACTGAGGCCGAGACTTACGACTACATGCCAAAACTTTTCAATGCTATTAACCGATTCAACAGTATATTGATCGACTTTGATAAAGATATGTGGGACTACTTACATTTTGGTTACTTCAAGCAAAGTGAGTATATAAATTTTCATTATAGTGAAGCAACTCTTGGTGCAGCTAGAGAAGCTCTTTCCTACCTGATTAGTTTGTTGCCTAGATCTCGTTTTCTGGAAGACTTGACTGATTCTAGTATTCGAAGGAACATGAGTACAGGATTAGTATGTTCTGCTCTTGCCTACAAGAGTACACTTAAGAATATAGCAAAGATTCAGATTGATGAAGCTCTCGTGAGTGAGGAGTTGAATCACTCTTGGGAGGTACTTGCTGAAGCAGTACAAGCTGTAATTCGAAGATATGGTGTTCCTGCAGAGACCTATGAGAAGCTTAAAGAACTAACAGCGGGGAGAAGGGTTACCAAAAAGAGTGTAAGAAAGTTTATTGAAGGCTTGGAATTACCTAAAGATCATAAGAGCATTTTGTCAAAGCTAACCCCACATAGCTATGTTGAAGAAGATGTTAAATTCGCTAAAATGGTAGACAGGGGAGTTAAAGCAGCTATAAGAAACACCAAGATCAGTGCAACCCCTGGGCCACAATTGGATGTTCTGTGTACGGGTAAATTCAAGGACTTGGCTCCTTATATGAGTGAGTATGGTCTAATCTACTTCCGTGTTCTAGTTAAGATCAAATGGTTGTTACTGCTTTCAGAAATTCCTGAAGTGACAGAGGTACCTAGGTTTAGTAAATCTGCTCAATCTTATTTGCAAGAAATAATTGATGGATTTAACATCGATGATGCATTTGAAGTAAAGAACCTTGAGAAAGTGGCAAACGACGGTGTAGCTGCGGTGGAGCGGTTCATGAAACAGAGATGTGAATCACATCCAGAAATAGCTAAGGTCAACAATCTTGCCCATGCACTAATCCTAAAAGGAACCATGGACAATGTCATATTTCCTGCCATGGATGATTTGATTCATGCAATATGTGGCATTGCTAAGAACACTGCTCATATTCCTATTCTCTCTTCCACTCATGGACAGCCTGTTGCGTTTACAACTTTGGGGAAAGAAATGGCAAGTTTTGCTGTGAGATTAAGCAGAGAACGGAAAGAGATTTCGCAGCTGGAGCTAATGGGGAATCTCGGAGGTGAGGTTGGAAATTACAGTGCTTATCATGTTGCATATCCTGGTATTAATTGGCCTCAAGTTGCTGAACAGTTTGTAACATCTCTGGGTTTGAGTTTTAATCCCTATGTTACCCGGATCAGAGCTTATGATTATGTGGCAGAATTTGTTCATGGCGTTAACCAGTTCAACAAGATATTGACGGACTTTGATGGAGACGTTGAAGGCTACATGTCTATGGGTTGTTTTAAGCAAATAAACAAGACTAGTGGAGGCATTAACATTGGTGCGGCCAGTGGCAATCTGTGTTCCCTGAGCAGGAAGTTACCTATTTCAACTCTTTTGAGGAACATGGGGTCAAGATTAGAGCATTCTCTTGTCACCTACAAAAACACACTCGATCTAATATCAAGACTCGAGGTGGTCGATATAGATTGCCCGATTGAGGACTACTTGAAGCTCTATTCCGGAGCTCTCGTCAAAGAGTTAGAGACGGTAGTGCAAAGATATGGTGTCCCCAAGCCCTATGAAAAATTTAAGGTACTCACCGGAGGACGAGCAGTCGTTACCAAGGAAAGTATAGTGGATTTTATTCAACGCTTGGAAGTACCTAACGAAGCAAAAACCATTCTACTCAAGTTAACACGATGTAGCTACGTCGGAGCCGCTTCGGAATTGGCCAGAACAGTAGACATCGCCGTGAATTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

927

Amino Acids

104.24

Weight (kDa)

7.31

Isoelectric Point (pI)

38.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lyase_1 PF00206 141 - 340 1.5e-20 Lyase
ASL_C PF08328 369 - 484 1.5e-34 Adenylosuccinate lyase C-terminal
Lyase_1 PF00206 557 - 776 2.8e-20 Lyase
ASL_C PF08328 797 - 911 8.3e-17 Adenylosuccinate lyase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 549
Acc65I GGTACC 1 cut(s) 1675
AccB1I GGYRCC 1 cut(s) 1675
AccBSI CCGCTC 1 cut(s) 1801
AccI GTMKAC 3 cut(s) 623, 1482, 2763
AccIII TCCGGA 1 cut(s) 2540
AciI CCGC 7 cut(s) 178, 839, 1346, 1793, 1801, 2363, 2739
AclWI GGATC 3 cut(s) 19, 295, 2219
AcoI YGGCCR 4 cut(s) 711, 836, 2364, 2751
AcuI CTGAAG 3 cut(s) 153, 1293, 1683
AcvI CACGTG 1 cut(s) 77
AfaI GTAC 9 cut(s) 321, 1156, 1192, 1266, 1281, 1558, 1677, 2616, 2682
AfiI CCNNNNNNNGG 3 cut(s) 633, 2391, 2518
AflII CTTAAG 1 cut(s) 1196
AflIII ACRYGT 1 cut(s) 2304
AhdI GACNNNNNGTC 1 cut(s) 2633
AhlI ACTAGT 1 cut(s) 2339
AjnI CCWGG 3 cut(s) 781, 1531, 2134
AjuI GAANNNNNNNTTGG 2 cut(s) 1038, 1070
Alw21I GWGCWC 2 cut(s) 501, 2548
Alw26I GTCTC 6 cut(s) 309, 688, 899, 1310, 2283, 2558
AlwI GGATC 3 cut(s) 19, 295, 2219
Ama87I CYCGRG 1 cut(s) 2489
Aor13HI TCCGGA 1 cut(s) 2540
AoxI GGCC 7 cut(s) 711, 836, 900, 1535, 2147, 2364, 2751
ApeKI GCWGC 4 cut(s) 1061, 1499, 1790, 2068
AseI ATTAAT 2 cut(s) 831, 2142
Asp700I GAANNNNTTC 1 cut(s) 2241
Asp718I GGTACC 1 cut(s) 1675
AspA2I CCTAGG 1 cut(s) 1679
AspLEI GCGC 1 cut(s) 550
AspS9I GGNCC 1 cut(s) 1535
AsuC2I CCSGG 1 cut(s) 2209
AsuHPI GGTGA 6 cut(s) 227, 248, 678, 2108, 2446, 2611
AsuII TTCGAA 2 cut(s) 1141, 1294
AvaI CYCGRG 1 cut(s) 2489
AvrII CCTAGG 1 cut(s) 1679
AxyI CCTNAGG 1 cut(s) 116
BaeGI GKGCMC 1 cut(s) 115
BaeI ACNNNNGTAYC 4 cut(s) 1659, 1667, 1692, 1700
BalI TGGCCA 2 cut(s) 713, 2753
BanI GGYRCC 1 cut(s) 1675
BanII GRGCYC 1 cut(s) 2548
BauI CACGAG 1 cut(s) 1232
BbrPI CACGTG 1 cut(s) 77
BbsI GAAGAC 2 cut(s) 81, 1125
Bbv12I GWGCWC 2 cut(s) 501, 2548
BbvCI CCTCAGC 1 cut(s) 849
BbvI GCAGC 4 cut(s) 1073, 1511, 1777, 2080
BccI CCATC 2 cut(s) 1718, 2279
BceAI ACGGC 1 cut(s) 2756
BciT130I CCWGG 3 cut(s) 783, 1533, 2136
BclI TGATCA 2 cut(s) 430, 609
BcnI CCSGG 1 cut(s) 2209
BcoDI GTCTC 6 cut(s) 309, 688, 899, 1310, 2283, 2558
BcuI ACTAGT 1 cut(s) 2339
BfmI CTRYAG 3 cut(s) 256, 789, 1311
BfrI CTTAAG 1 cut(s) 1196
BglII AGATCT 1 cut(s) 1103
BisI GCNGC 7 cut(s) 839, 1062, 1500, 1791, 2069, 2364, 2739
BlnI CCTAGG 1 cut(s) 1679
BlsI GCNGC 7 cut(s) 840, 1063, 1501, 1792, 2070, 2365, 2740
Bme1390I CCNGG 4 cut(s) 783, 1533, 2136, 2209
BmeRI GACNNNNNGTC 1 cut(s) 2633
BmeT110I CYCGRG 1 cut(s) 2489
BmgT120I GGNCC 1 cut(s) 1535
BmiI GGNNCC 4 cut(s) 1581, 1677, 1882, 2737
BmrFI CCNGG 4 cut(s) 783, 1533, 2136, 2209
BmsI GCATC 6 cut(s) 70, 118, 181, 458, 559, 1732
BpiI GAAGAC 2 cut(s) 81, 1125
BpmI CTGGAG 1 cut(s) 2093
Bpu10I CCTNAGC 4 cut(s) 492, 849, 1842, 2387
Bpu14I TTCGAA 2 cut(s) 1141, 1294
BpuEI CTTGAG 5 cut(s) 40, 741, 1784, 2136, 2693
BpuMI CCSGG 1 cut(s) 2209
Bsa29I ATCGAT 2 cut(s) 370, 1737
BsaAI YACGTR 1 cut(s) 77
BsaBI GATNNNNATC 2 cut(s) 472, 1822
BsaI GGTCTC 2 cut(s) 688, 1310
BsaJI CCNNGG 7 cut(s) 198, 1531, 1532, 1679, 1884, 1908, 2643
BsaWI WCCGGW 2 cut(s) 2540, 2621
BsaXI ACNNNNNCTCC 4 cut(s) 2085, 2115, 2535, 2565
Bsc4I CCNNNNNNNGG 3 cut(s) 633, 2391, 2518
Bse1I ACTGG 2 cut(s) 2257, 2367
Bse21I CCTNAGG 1 cut(s) 116
Bse3DI GCAATG 2 cut(s) 624, 1938
Bse8I GATNNNNATC 2 cut(s) 472, 1822
BseAI TCCGGA 1 cut(s) 2540
BseBI CCWGG 3 cut(s) 783, 1533, 2136
BseCI ATCGAT 2 cut(s) 370, 1737
BseDI CCNNGG 7 cut(s) 198, 1531, 1532, 1679, 1884, 1908, 2643
BseGI GGATG 3 cut(s) 1552, 1828, 1918
BseJI GATNNNNATC 2 cut(s) 472, 1822
BseLI CCNNNNNNNGG 3 cut(s) 633, 2391, 2518
BseMI GCAATG 2 cut(s) 624, 1938
BseMII CTCAG 5 cut(s) 356, 455, 840, 888, 2378
BseNI ACTGG 2 cut(s) 2257, 2367
BseRI GAGGAG 1 cut(s) 1256
BseSI GKGCMC 1 cut(s) 115
BseXI GCAGC 4 cut(s) 1073, 1511, 1777, 2080
BsgI GTGCAG 1 cut(s) 1080
Bsh1285I CGRYCG 1 cut(s) 159
BshFI GGCC 7 cut(s) 713, 838, 902, 1537, 2149, 2366, 2753
BshNI GGYRCC 1 cut(s) 1675
BshVI ATCGAT 2 cut(s) 370, 1737
BsiEI CGRYCG 1 cut(s) 159
BsiHKAI GWGCWC 2 cut(s) 501, 2548
BsiHKCI CYCGRG 1 cut(s) 2489
BsiSI CCGG 3 cut(s) 2209, 2541, 2622
BslFI GGGAC 5 cut(s) 134, 650, 683, 1001, 2573
BslI CCNNNNNNNGG 3 cut(s) 633, 2391, 2518
BsmAI GTCTC 6 cut(s) 309, 688, 899, 1310, 2283, 2558
BsmBI CGTCTC 3 cut(s) 309, 2283, 2558
BsmFI GGGAC 5 cut(s) 134, 650, 683, 1001, 2573
BsmI GAATGC 1 cut(s) 2443
BsnI GGCC 7 cut(s) 713, 838, 902, 1537, 2149, 2366, 2753
Bso31I GGTCTC 2 cut(s) 688, 1310
BsoBI CYCGRG 1 cut(s) 2489
Bsp119I TTCGAA 2 cut(s) 1141, 1294
Bsp1286I GDGCHC 3 cut(s) 115, 501, 2548
Bsp13I TCCGGA 1 cut(s) 2540
Bsp19I CCATGG 2 cut(s) 1884, 1908
BspACI CCGC 7 cut(s) 178, 839, 1346, 1793, 1801, 2363, 2739
BspANI GGCC 7 cut(s) 713, 838, 902, 1537, 2149, 2366, 2753
BspCNI CTCAG 5 cut(s) 355, 456, 841, 889, 2379
BspDI ATCGAT 2 cut(s) 370, 1737
BspEI TCCGGA 1 cut(s) 2540
BspHI TCATGA 2 cut(s) 204, 1806
BspLI GGNNCC 4 cut(s) 1581, 1677, 1882, 2737
BspMAI CTGCAG 1 cut(s) 1315
BspPI GGATC 3 cut(s) 19, 295, 2219
BspT104I TTCGAA 2 cut(s) 1141, 1294
BspT107I GGYRCC 1 cut(s) 1675
BspTI CTTAAG 1 cut(s) 1196
BspTNI GGTCTC 2 cut(s) 688, 1310
BsrBI CCGCTC 1 cut(s) 1801
BsrDI GCAATG 2 cut(s) 624, 1938
BsrI ACTGG 2 cut(s) 2257, 2367
BssECI CCNNGG 7 cut(s) 198, 1531, 1532, 1679, 1884, 1908, 2643
BssSI CACGAG 1 cut(s) 1232
BssT1I CCWWGG 5 cut(s) 198, 1679, 1884, 1908, 2643
Bst2BI CACGAG 1 cut(s) 1232
Bst2UI CCWGG 3 cut(s) 783, 1533, 2136
Bst4CI ACNGT 8 cut(s) 542, 682, 956, 1784, 2114, 2166, 2569, 2761
Bst6I CTCTTC 1 cut(s) 1978
BstAFI CTTAAG 1 cut(s) 1196
BstAPI GCANNNNNTGC 2 cut(s) 194, 2030
BstBAI YACGTR 1 cut(s) 77
BstBI TTCGAA 2 cut(s) 1141, 1294
BstC8I GCNNGC 2 cut(s) 339, 520
BstDEI CTNAG 9 cut(s) 116, 342, 464, 492, 849, 897, 1842, 1944, 2387
BstDSI CCRYGG 2 cut(s) 1884, 1908
BstEII GGTNACC 1 cut(s) 1357
BstF5I GGATG 3 cut(s) 1552, 1828, 1918
BstHHI GCGC 1 cut(s) 550
BstMAI GTCTC 6 cut(s) 309, 688, 899, 1310, 2283, 2558
BstMCI CGRYCG 1 cut(s) 159
BstMWI GCNNNNNNNGC 6 cut(s) 194, 719, 1070, 1283, 2030, 2074
BstNI CCWGG 3 cut(s) 783, 1533, 2136
BstNSI RCATGY 3 cut(s) 341, 922, 2308
BstPI GGTNACC 1 cut(s) 1357
BstSCI CCNGG 4 cut(s) 781, 1531, 2134, 2207
BstSFI CTRYAG 3 cut(s) 256, 789, 1311
BstSLI GKGCMC 1 cut(s) 115
BstV1I GCAGC 4 cut(s) 1073, 1511, 1777, 2080
BstV2I GAAGAC 2 cut(s) 81, 1125
BstX2I RGATCY 2 cut(s) 300, 1103
BstXI CCANNNNNNTGG 1 cut(s) 697
BstYI RGATCY 2 cut(s) 300, 1103
Bsu15I ATCGAT 2 cut(s) 370, 1737
Bsu36I CCTNAGG 1 cut(s) 116
BsuRI GGCC 7 cut(s) 713, 838, 902, 1537, 2149, 2366, 2753
BsuTUI ATCGAT 2 cut(s) 370, 1737
BtgI CCRYGG 2 cut(s) 1884, 1908
BtgZI GCGATG 2 cut(s) 260, 2752
BtsCI GGATG 3 cut(s) 1552, 1828, 1918
BtsI GCAGTG 2 cut(s) 450, 1950
BtsIMutI CAGTG 8 cut(s) 123, 337, 350, 450, 1528, 1950, 2119, 2374
Cac8I GCNNGC 2 cut(s) 339, 520
CciI TCATGA 2 cut(s) 204, 1806
CfoI GCGC 1 cut(s) 550
Cfr13I GGNCC 1 cut(s) 1535
ClaI ATCGAT 2 cut(s) 370, 1737
CseI GACGC 1 cut(s) 194
Csp6I GTAC 9 cut(s) 320, 1155, 1191, 1265, 1280, 1557, 1676, 2615, 2681
CspCI CAANNNNNGTGG 2 cut(s) 2323, 2358
CviQI GTAC 9 cut(s) 320, 1155, 1191, 1265, 1280, 1557, 1676, 2615, 2681
DdeI CTNAG 9 cut(s) 116, 342, 464, 492, 849, 897, 1842, 1944, 2387
DriI GACNNNNNGTC 1 cut(s) 2633
EaeI YGGCCR 4 cut(s) 711, 836, 2364, 2751
Eam1104I CTCTTC 1 cut(s) 1978
Eam1105I GACNNNNNGTC 1 cut(s) 2633
EarI CTCTTC 1 cut(s) 1978
Ecl136II GAGCTC 1 cut(s) 2546
Eco130I CCWWGG 5 cut(s) 198, 1679, 1884, 1908, 2643
Eco24I GRGCYC 1 cut(s) 2548
Eco31I GGTCTC 2 cut(s) 688, 1310
Eco53kI GAGCTC 1 cut(s) 2546
Eco57I CTGAAG 3 cut(s) 153, 1293, 1683
Eco72I CACGTG 1 cut(s) 77
Eco81I CCTNAGG 1 cut(s) 116
Eco88I CYCGRG 1 cut(s) 2489
Eco91I GGTNACC 1 cut(s) 1357
EcoICRI GAGCTC 1 cut(s) 2546
EcoO65I GGTNACC 1 cut(s) 1357
EcoRI GAATTC 4 cut(s) 261, 308, 854, 2776
EcoRII CCWGG 3 cut(s) 781, 1531, 2134
EcoT14I CCWWGG 5 cut(s) 198, 1679, 1884, 1908, 2643
EcoT22I ATGCAT 2 cut(s) 174, 1747
EcoT38I GRGCYC 1 cut(s) 2548
ErhI CCWWGG 5 cut(s) 198, 1679, 1884, 1908, 2643
Esp3I CGTCTC 3 cut(s) 309, 2283, 2558
FalI AAGNNNNNCTT 2 cut(s) 1038, 1070
FaqI GGGAC 5 cut(s) 134, 650, 683, 1001, 2573
FauI CCCGC 1 cut(s) 1339
FbaI TGATCA 2 cut(s) 430, 609
FblI GTMKAC 3 cut(s) 623, 1482, 2763
Fnu4HI GCNGC 7 cut(s) 839, 1062, 1500, 1791, 2069, 2364, 2739
FokI GGATG 3 cut(s) 1559, 1815, 1925
FriOI GRGCYC 1 cut(s) 2548
Fsp4HI GCNGC 7 cut(s) 839, 1062, 1500, 1791, 2069, 2364, 2739
FspI TGCGCA 1 cut(s) 549
GlaI GCGC 1 cut(s) 549
GluI GCNGC 7 cut(s) 839, 1062, 1500, 1791, 2069, 2364, 2739
GsuI CTGGAG 1 cut(s) 2093
HaeIII GGCC 7 cut(s) 713, 838, 902, 1537, 2149, 2366, 2753
HapII CCGG 3 cut(s) 2209, 2541, 2622
HgaI GACGC 1 cut(s) 194
HhaI GCGC 1 cut(s) 550
Hin6I GCGC 1 cut(s) 548
HinP1I GCGC 1 cut(s) 548
HincII GTYRAC 3 cut(s) 1849, 2254, 2715
HindII GTYRAC 3 cut(s) 1849, 2254, 2715
HindIII AAGCTT 2 cut(s) 58, 1328
HinfI GANTC 8 cut(s) 948, 1130, 1213, 1249, 1823, 1921, 2086, 2487
HpaI GTTAAC 2 cut(s) 2254, 2715
HpaII CCGG 3 cut(s) 2209, 2541, 2622
HphI GGTGA 6 cut(s) 227, 248, 678, 2108, 2446, 2611
Hpy99I CGWCG 2 cut(s) 1784, 2735
HpyAV CCTTC 5 cut(s) 697, 1137, 1347, 1382, 2291
HpyCH4III ACNGT 8 cut(s) 542, 682, 956, 1784, 2114, 2166, 2569, 2761
HpyCH4IV ACGT 5 cut(s) 76, 318, 554, 2292, 2730
HpyF10VI GCNNNNNNNGC 6 cut(s) 194, 719, 1070, 1283, 2030, 2074
HpyF3I CTNAG 9 cut(s) 116, 342, 464, 492, 849, 897, 1842, 1944, 2387
HpySE526I ACGT 5 cut(s) 76, 318, 554, 2292, 2730
HspAI GCGC 1 cut(s) 548
Kpn2I TCCGGA 1 cut(s) 2540
KpnI GGTACC 1 cut(s) 1679
Ksp22I TGATCA 2 cut(s) 430, 609
KspAI GTTAAC 2 cut(s) 2254, 2715
LmnI GCTCC 5 cut(s) 1585, 1798, 2074, 2543, 2735
Lsp1109I GCAGC 4 cut(s) 1073, 1511, 1777, 2080
LweI GCATC 6 cut(s) 70, 118, 181, 458, 559, 1732
MaeII ACGT 5 cut(s) 76, 318, 554, 2292, 2730
MbiI CCGCTC 1 cut(s) 1801
MfeI CAATTG 1 cut(s) 1541
MflI RGATCY 2 cut(s) 300, 1103
MhlI GDGCHC 3 cut(s) 115, 501, 2548
MlsI TGGCCA 2 cut(s) 713, 2753
MluNI TGGCCA 2 cut(s) 713, 2753
MlyI GAGTC 1 cut(s) 2481
MmeI TCCRAC 3 cut(s) 390, 2083, 2713
Mox20I TGGCCA 2 cut(s) 713, 2753
Mph1103I ATGCAT 2 cut(s) 174, 1747
MroI TCCGGA 1 cut(s) 2540
MroXI GAANNNNTTC 1 cut(s) 2241
MscI TGGCCA 2 cut(s) 713, 2753
MslI CAYNNNNRTG 7 cut(s) 75, 395, 432, 1041, 1446, 2309, 2771
Msp20I TGGCCA 2 cut(s) 713, 2753
MspA1I CMGCKG 2 cut(s) 1346, 2071
MspCI CTTAAG 1 cut(s) 1196
MspI CCGG 3 cut(s) 2209, 2541, 2622
MspR9I CCNGG 4 cut(s) 783, 1533, 2136, 2209
MunI CAATTG 1 cut(s) 1541
Mva1269I GAATGC 1 cut(s) 2443
MvaI CCWGG 3 cut(s) 783, 1533, 2136
MwoI GCNNNNNNNGC 6 cut(s) 194, 719, 1070, 1283, 2030, 2074
NciI CCSGG 1 cut(s) 2209
NcoI CCATGG 2 cut(s) 1884, 1908
NlaIV GGNNCC 4 cut(s) 1581, 1677, 1882, 2737
NmeAIII GCCGAG 1 cut(s) 928
NmuCI GTSAC 3 cut(s) 859, 1666, 2452
NsbI TGCGCA 1 cut(s) 549
NsiI ATGCAT 2 cut(s) 174, 1747
NspI RCATGY 3 cut(s) 341, 922, 2308
NspV TTCGAA 2 cut(s) 1141, 1294
PaeI GCATGC 1 cut(s) 341
PaeR7I CTCGAG 1 cut(s) 2489
PagI TCATGA 2 cut(s) 204, 1806
PasI CCCWGGG 1 cut(s) 1532
PciI ACATGT 1 cut(s) 2304
PcsI WCGNNNNNNNCGW 1 cut(s) 2496
PctI GAATGC 1 cut(s) 2443
PdmI GAANNNNTTC 1 cut(s) 2241
PfeI GAWTC 7 cut(s) 948, 1130, 1213, 1249, 1823, 1921, 2086
PflFI GACNNNGTC 1 cut(s) 1892
PkrI GCNGC 7 cut(s) 840, 1063, 1501, 1792, 2070, 2365, 2740
Ple19I CGATCG 1 cut(s) 159
PleI GAGTC 1 cut(s) 2481
PmaCI CACGTG 1 cut(s) 77
PmlI CACGTG 1 cut(s) 77
PpsI GAGTC 1 cut(s) 2481
Ppu21I YACGTR 1 cut(s) 77
PscI ACATGT 1 cut(s) 2304
PshBI ATTAAT 2 cut(s) 831, 2142
Psp124BI GAGCTC 1 cut(s) 2548
Psp6I CCWGG 3 cut(s) 781, 1531, 2134
PspCI CACGTG 1 cut(s) 77
PspEI GGTNACC 1 cut(s) 1357
PspGI CCWGG 3 cut(s) 781, 1531, 2134
PspN4I GGNNCC 4 cut(s) 1581, 1677, 1882, 2737
PspPI GGNCC 1 cut(s) 1535
PspXI VCTCGAGB 1 cut(s) 2489
PstI CTGCAG 1 cut(s) 1315
PsuI RGATCY 2 cut(s) 300, 1103
PsyI GACNNNGTC 1 cut(s) 1892
PvuI CGATCG 1 cut(s) 159
PvuII CAGCTG 1 cut(s) 2071
RsaI GTAC 9 cut(s) 321, 1156, 1192, 1266, 1281, 1558, 1677, 2616, 2682
RsaNI GTAC 9 cut(s) 320, 1155, 1191, 1265, 1280, 1557, 1676, 2615, 2681
RseI CAYNNNNRTG 7 cut(s) 75, 395, 432, 1041, 1446, 2309, 2771
SacI GAGCTC 1 cut(s) 2548
SatI GCNGC 7 cut(s) 839, 1062, 1500, 1791, 2069, 2364, 2739
Sau96I GGNCC 1 cut(s) 1535
SchI GAGTC 1 cut(s) 2481
ScrFI CCNGG 4 cut(s) 783, 1533, 2136, 2209
SduI GDGCHC 3 cut(s) 115, 501, 2548
SfaNI GCATC 6 cut(s) 70, 118, 181, 458, 559, 1732
SfcI CTRYAG 3 cut(s) 256, 789, 1311
Sfr274I CTCGAG 1 cut(s) 2489
SfuI TTCGAA 2 cut(s) 1141, 1294
SlaI CTCGAG 1 cut(s) 2489
SmiMI CAYNNNNRTG 7 cut(s) 75, 395, 432, 1041, 1446, 2309, 2771
SmlI CTYRAG 7 cut(s) 55, 756, 1196, 1763, 2151, 2489, 2708
SmoI CTYRAG 7 cut(s) 55, 756, 1196, 1763, 2151, 2489, 2708
SpeI ACTAGT 1 cut(s) 2339
SphI GCATGC 1 cut(s) 341
SsiI CCGC 7 cut(s) 178, 839, 1346, 1793, 1801, 2363, 2739
SstI GAGCTC 1 cut(s) 2548
StyD4I CCNGG 4 cut(s) 781, 1531, 2134, 2207
StyI CCWWGG 5 cut(s) 198, 1679, 1884, 1908, 2643
TaaI ACNGT 8 cut(s) 542, 682, 956, 1784, 2114, 2166, 2569, 2761
TaiI ACGT 5 cut(s) 79, 321, 557, 2295, 2733
TaqI TCGA 9 cut(s) 370, 501, 966, 1141, 1294, 1737, 2472, 2490, 2499
TatI WGTACW 3 cut(s) 1154, 1190, 1279
TauI GCSGC 3 cut(s) 841, 2366, 2741
TfiI GAWTC 7 cut(s) 948, 1130, 1213, 1249, 1823, 1921, 2086
TscAI CASTG 8 cut(s) 130, 337, 350, 450, 1528, 1957, 2119, 2374
TseFI GTSAC 3 cut(s) 859, 1666, 2452
TseI GCWGC 4 cut(s) 1061, 1499, 1790, 2068
Tsp45I GTSAC 3 cut(s) 859, 1666, 2452
TspGWI ACGGA 4 cut(s) 687, 1604, 2068, 2291
TspRI CASTG 8 cut(s) 130, 337, 350, 450, 1528, 1957, 2119, 2374
Tth111I GACNNNGTC 1 cut(s) 1892
Vha464I CTTAAG 1 cut(s) 1196
VspI ATTAAT 2 cut(s) 831, 2142
XceI RCATGY 3 cut(s) 341, 922, 2308
XhoI CTCGAG 1 cut(s) 2489
XmaJI CCTAGG 1 cut(s) 1679
XmiI GTMKAC 3 cut(s) 623, 1482, 2763
XmnI GAANNNNTTC 1 cut(s) 2241
Zsp2I ATGCAT 2 cut(s) 174, 1747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.