Rw7G007080

Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
6119997 .. 6125547
5551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G007080.1

Sequence Viewer

Length: 2934 bp
ATGCGAGCAAACGGCAAGTATCCATCTCTTATTGAATTTCCAAACCGGAGAAACATGATGAGTTCCAAGTGTCCCAACTCTATTGTCGACCTCAACTCCTTTCGATTTTTCATGGACATGGGATCATCTTCTAGTGTTATGCCACCCAAATATCAAAGACCAACCTCAAGCTTGTATCTTCATTCACGTGATGCTTTGTCTTCCTTTGGCAGAGGAATTTGTGCCCTAAGGGACACTGATGCTGAAGATTTCAACTTTTCATGGGCGATCGGGAATAGTATGCATCTGCGGACAGACGCAAGTTATGCCAAGGTCATGAAATTCGGTGAACTATCTTCTTCAACGGGTGAATATGCGATGATCTACTACAGAATTCTAGTTCAGGTCAAATGGTTGTTGAAACTTTCAGAGATCCCAGAATTCAGAGACGTACCTAGTTTCAGTGAGCATGCTCAGTGTTACTTACAAGGAATTATTGATCGATTTTGCATGGTGGAAGCCATAGAAATGACAGAGAGGTTGGAGAAAAAAACAAACCATGATCATGTTAAAGCAGTGGAATACTTCTTGAAGCTGAGATGCAGATCAAGACCAGAGATAGCTAAGGTGCTCGATACTTTTCATTTTGCTTGCACATCAGAGGACATCAACAGTCTTGCGCATACGTTAATGTTAAAAGATGCTATGAACAATGTTATATTTCCTGTCATGGACGATCTGATCAAGGCAATGTCTACCATGTCAAGGGACAATGCTTCCATTCCAATTCTTTCTCGCAGGGACGGAAACACGGTCTCACCCACAACTTTGGGGAAGGAAATGGCCAATTTTGCTGTCAGGCTAGGCATACAGAAGCACAAACTTTCTCAAGTGAAGATAATGGGGAAGTTTCCTGGTGCTGTAGGAAGTTCCAATGCTCATTATGTTACATATCCTCATATTAATTGGCCGCAAATTGCTGAGGAATTCGTGACTTCTCTTGGAGTGAGTTTCAATCCTTATGTTACTGAGGCCGAGACTTACGACTACATGCCAAAACTTTTCAATGCTATTAACCGATTCAATAGTATATTGATCGACTTTGATAAAGATATGTGGGACTACTTACATTTTGGTTACTTCAAGCAAAGTGAGTATATAAATTTTCATTATAGTGAAGCAACTCTTGGTGCAGCTAGAGAAGCTCTTTCCTACCTGATTAGTTTGTTGCCTAGATCTCGTTTTCTGGAAGACTTGACTGATTCTAGTATTCGGAGGAACATGAGTACAGGATTAGTATGTTCTGCTCTTGCCTACAAGAGTACACTTAAGAATATAGCAAAGATTCAGATTGATGAAGCTCTCGTGAGTGAAGAGTTGAATCACTCTTGGGAGGTACTTGCTGAAGCAGTACAAGCTGTAATTCGAAGATATGGTGTTCCTGCAGAGACCTATGAGAAGCTTAAAGAACTAACAGCGGGGAGAAGGGTTACCAAAAAGAGTGTAAGAAAGTTTATTGAAGGCTTGGAATTACCTAAAGATCATAAGAGCATTTTGTCAAAGCTAACCCCACATAGCTATGTTGAAGAAGATGTTAAATTCGCTAAAATGGTAGACAGGGGAGTTAAAGCAGCTATAAGAAACACCAAGATCAGTGCAACCGCTGGGCCACAATTGGATGTTCTGTGTACGGGTAAATTCAAGGACTTGGCTCCTTATATGAGTGAGTATGGTCTAATCTACTTCCGTGTTCTAGTTAAGATCAAATGGTTGTTACTGCTTTCAGAAATTCCTGAAGTGACAGAGGTACCTAGGTTTAGTAAATCTGCTCAATCTTATTTGCAAGAAATAATTGATGGATTTAACATCGATGATGCATTTGAAGTAAAGAACCTTGAGAAAGTGGCAAACGACGGTGTAGCTGCGGTGGAGCGGTTCATGAAACAGAGATGTGAATCACATCCAGAAATAGCTAAGGTGGTTGGATTTTTTAATTTTGCTTGCACATCTGAGGAGGTCAACAATCTTGCCCATGCACTAATCCTAAAAGGAACCATGGACAATGTCATATTTCCTGCCATGGATGATTTGATTCATGCAATATGTGGCATTGCTAAGAAAACTGCTCATATTCCTATTCTCTCTTCCACTCATGGGCAGCCTGTTGCGTTTACAACTTTGGGGAAAGAAATGGCAAGTTTTGCTGTGAGATTAAGCAGAGAACGGAAAGAGATTTCGCAGCTGGAGCTAATGGGGAATCTCGGAGGTGAGGTTGGAAATTACAGCGCTTATCATGTTGCATATCCTGGTATTAATTGGCCTCAAGTTGCTGAACAGTTTGTAACATCTCTGGGTTTGAGTTTTAATCCCTATGTTACCCGGATCAGAGCTTATGATTATGTGGCAGAACTTGTTCATGGCGTTAACCAGTTCAACAAGATATTGACGGACTTTGATGGAGACGTAGAAGGCTACATGTCTATGGGTTGTTTTAAGCAAATAAACAAGACTAGTGAAGGCATTAACATTGGTGCGGCCAGTGGCAATCTGTGTTCCCTGAGCAGGAAGTTACCTATTTCAACTCTTTTGAGGAACATGGGGTCAAGATTAGAGCATTCTCTTGTCACCTACAAAAACACACTCGATCTAATATCAAGACTCGAGGTGGTCGATATAGATTGCCCGATTGAGGACTACTTGAAGCTCTATTCCGGAGCTCTCGTCAAAGAGTTAGAGACGGTAGTGCAAAGATATGGTGTCCCCAAGCCCTATGAAAAATTTAAGGTACTCACCGGAGGACGAGCAGTCGTTACCAAGGAAAGTATAGTGGATTTTATTCAACGCTTGGAAGTACCTAACGAAGCAAAAACCATTCTACTCAAGTTAACACGATGTAGCTACGTCGGAGCCGCTTCGGAATTGGCCAGAACAGTAGACATCGCCGTGAATTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

977

Amino Acids

110.05

Weight (kDa)

7.79

Isoelectric Point (pI)

40.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lyase_1 PF00206 178 - 377 1.6e-20 Lyase
ASL_C PF08328 406 - 521 1.6e-34 Adenylosuccinate lyase C-terminal
Lyase_1 PF00206 594 - 832 2.8e-27 Lyase
ASL_C PF08328 847 - 961 8.9e-17 Adenylosuccinate lyase C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 660
Acc65I GGTACC 1 cut(s) 1786
AccB1I GGYRCC 1 cut(s) 1786
AccBSI CCGCTC 1 cut(s) 1912
AccI GTMKAC 4 cut(s) 87, 734, 1593, 2913
AccIII TCCGGA 1 cut(s) 2690
AciI CCGC 8 cut(s) 289, 950, 1457, 1641, 1904, 1912, 2513, 2889
AclWI GGATC 3 cut(s) 130, 406, 2369
AcoI YGGCCR 4 cut(s) 822, 947, 2514, 2901
AcuI CTGAAG 3 cut(s) 264, 1404, 1794
AcvI CACGTG 1 cut(s) 188
AfaI GTAC 9 cut(s) 432, 1267, 1303, 1377, 1392, 1669, 1788, 2766, 2832
AfeI AGCGCT 1 cut(s) 2266
AfiI CCNNNNNNNGG 4 cut(s) 744, 2133, 2541, 2668
AflII CTTAAG 1 cut(s) 1307
AflIII ACRYGT 1 cut(s) 2454
AhdI GACNNNNNGTC 1 cut(s) 2783
AhlI ACTAGT 1 cut(s) 2489
AjnI CCWGG 2 cut(s) 892, 2284
AjuI GAANNNNNNNTTGG 2 cut(s) 1149, 1181
Alw21I GWGCWC 2 cut(s) 612, 2698
Alw26I GTCTC 6 cut(s) 420, 799, 1010, 1421, 2433, 2708
AlwI GGATC 3 cut(s) 130, 406, 2369
Ama87I CYCGRG 1 cut(s) 2639
Aor13HI TCCGGA 1 cut(s) 2690
Aor51HI AGCGCT 1 cut(s) 2266
AoxI GGCC 7 cut(s) 822, 947, 1011, 1646, 2297, 2514, 2901
ApeKI GCWGC 5 cut(s) 1172, 1610, 1901, 2137, 2218
AseI ATTAAT 2 cut(s) 942, 2292
Asp700I GAANNNNTTC 1 cut(s) 2391
Asp718I GGTACC 1 cut(s) 1786
AspA2I CCTAGG 1 cut(s) 1790
AspLEI GCGC 2 cut(s) 661, 2267
AspS9I GGNCC 1 cut(s) 1646
AsuC2I CCSGG 1 cut(s) 2359
AsuHPI GGTGA 6 cut(s) 338, 359, 789, 2258, 2596, 2761
AsuII TTCGAA 1 cut(s) 1405
AvaI CYCGRG 1 cut(s) 2639
AvrII CCTAGG 1 cut(s) 1790
AxyI CCTNAGG 1 cut(s) 227
BaeGI GKGCMC 1 cut(s) 226
BaeI ACNNNNGTAYC 4 cut(s) 1770, 1778, 1803, 1811
BalI TGGCCA 2 cut(s) 824, 2903
BanI GGYRCC 1 cut(s) 1786
BanII GRGCYC 1 cut(s) 2698
BauI CACGAG 1 cut(s) 1343
BbrPI CACGTG 1 cut(s) 188
BbsI GAAGAC 2 cut(s) 192, 1236
Bbv12I GWGCWC 2 cut(s) 612, 2698
BbvCI CCTCAGC 1 cut(s) 960
BbvI GCAGC 5 cut(s) 1184, 1622, 1888, 2149, 2230
BccI CCATC 3 cut(s) 31, 1829, 2429
BceAI ACGGC 2 cut(s) 28, 2906
BciT130I CCWGG 2 cut(s) 894, 2286
BciVI GTATCC 1 cut(s) 30
BclI TGATCA 2 cut(s) 541, 720
BcnI CCSGG 1 cut(s) 2359
BcoDI GTCTC 6 cut(s) 420, 799, 1010, 1421, 2433, 2708
BcuI ACTAGT 1 cut(s) 2489
BfmI CTRYAG 3 cut(s) 367, 900, 1422
BfoI RGCGCY 1 cut(s) 2268
BfrI CTTAAG 1 cut(s) 1307
BfuI GTATCC 1 cut(s) 30
BglII AGATCT 1 cut(s) 1214
BisI GCNGC 8 cut(s) 950, 1173, 1611, 1902, 2138, 2219, 2514, 2889
BlnI CCTAGG 1 cut(s) 1790
BlsI GCNGC 8 cut(s) 951, 1174, 1612, 1903, 2139, 2220, 2515, 2890
Bme1390I CCNGG 3 cut(s) 894, 2286, 2359
BmeRI GACNNNNNGTC 1 cut(s) 2783
BmeT110I CYCGRG 1 cut(s) 2639
BmgT120I GGNCC 1 cut(s) 1646
BmiI GGNNCC 4 cut(s) 1692, 1788, 2032, 2887
BmrFI CCNGG 3 cut(s) 894, 2286, 2359
BmsI GCATC 6 cut(s) 181, 229, 292, 569, 670, 1843
BpiI GAAGAC 2 cut(s) 192, 1236
BpmI CTGGAG 1 cut(s) 2243
Bpu10I CCTNAGC 4 cut(s) 603, 960, 1953, 2537
Bpu14I TTCGAA 1 cut(s) 1405
BpuEI CTTGAG 5 cut(s) 151, 852, 1895, 2286, 2843
BpuMI CCSGG 1 cut(s) 2359
Bsa29I ATCGAT 2 cut(s) 481, 1848
BsaAI YACGTR 1 cut(s) 188
BsaBI GATNNNNATC 2 cut(s) 583, 1933
BsaI GGTCTC 2 cut(s) 799, 1421
BsaJI CCNNGG 5 cut(s) 309, 1790, 2034, 2058, 2793
BsaWI WCCGGW 3 cut(s) 45, 2690, 2771
BsaXI ACNNNNNCTCC 6 cut(s) 80, 110, 2235, 2265, 2685, 2715
Bsc4I CCNNNNNNNGG 4 cut(s) 744, 2133, 2541, 2668
Bse1I ACTGG 2 cut(s) 2407, 2517
Bse21I CCTNAGG 1 cut(s) 227
Bse3DI GCAATG 2 cut(s) 735, 2088
Bse8I GATNNNNATC 2 cut(s) 583, 1933
BseAI TCCGGA 1 cut(s) 2690
BseBI CCWGG 2 cut(s) 894, 2286
BseCI ATCGAT 2 cut(s) 481, 1848
BseDI CCNNGG 5 cut(s) 309, 1790, 2034, 2058, 2793
BseGI GGATG 3 cut(s) 1663, 1939, 2068
BseJI GATNNNNATC 2 cut(s) 583, 1933
BseLI CCNNNNNNNGG 4 cut(s) 744, 2133, 2541, 2668
BseMI GCAATG 2 cut(s) 735, 2088
BseMII CTCAG 6 cut(s) 467, 566, 951, 999, 1980, 2528
BseNI ACTGG 2 cut(s) 2407, 2517
BseRI GAGGAG 1 cut(s) 2006
BseSI GKGCMC 1 cut(s) 226
BseXI GCAGC 5 cut(s) 1184, 1622, 1888, 2149, 2230
BseYI CCCAGC 1 cut(s) 1643
BsgI GTGCAG 1 cut(s) 1191
Bsh1285I CGRYCG 1 cut(s) 270
BshFI GGCC 7 cut(s) 824, 949, 1013, 1648, 2299, 2516, 2903
BshNI GGYRCC 1 cut(s) 1786
BshVI ATCGAT 2 cut(s) 481, 1848
BsiEI CGRYCG 1 cut(s) 270
BsiHKAI GWGCWC 2 cut(s) 612, 2698
BsiHKCI CYCGRG 1 cut(s) 2639
BsiSI CCGG 4 cut(s) 46, 2359, 2691, 2772
BslFI GGGAC 6 cut(s) 57, 245, 761, 794, 1112, 2723
BslI CCNNNNNNNGG 4 cut(s) 744, 2133, 2541, 2668
BsmAI GTCTC 6 cut(s) 420, 799, 1010, 1421, 2433, 2708
BsmBI CGTCTC 3 cut(s) 420, 2433, 2708
BsmFI GGGAC 6 cut(s) 57, 245, 761, 794, 1112, 2723
BsmI GAATGC 1 cut(s) 2593
BsnI GGCC 7 cut(s) 824, 949, 1013, 1648, 2299, 2516, 2903
Bso31I GGTCTC 2 cut(s) 799, 1421
BsoBI CYCGRG 1 cut(s) 2639
Bsp119I TTCGAA 1 cut(s) 1405
Bsp1286I GDGCHC 3 cut(s) 226, 612, 2698
Bsp13I TCCGGA 1 cut(s) 2690
Bsp19I CCATGG 2 cut(s) 2034, 2058
BspACI CCGC 8 cut(s) 289, 950, 1457, 1641, 1904, 1912, 2513, 2889
BspANI GGCC 7 cut(s) 824, 949, 1013, 1648, 2299, 2516, 2903
BspCNI CTCAG 6 cut(s) 466, 567, 952, 1000, 1981, 2529
BspDI ATCGAT 2 cut(s) 481, 1848
BspEI TCCGGA 1 cut(s) 2690
BspHI TCATGA 2 cut(s) 315, 1917
BspLI GGNNCC 4 cut(s) 1692, 1788, 2032, 2887
BspMAI CTGCAG 1 cut(s) 1426
BspPI GGATC 3 cut(s) 130, 406, 2369
BspT104I TTCGAA 1 cut(s) 1405
BspT107I GGYRCC 1 cut(s) 1786
BspTI CTTAAG 1 cut(s) 1307
BspTNI GGTCTC 2 cut(s) 799, 1421
BsrBI CCGCTC 1 cut(s) 1912
BsrDI GCAATG 2 cut(s) 735, 2088
BsrI ACTGG 2 cut(s) 2407, 2517
BssECI CCNNGG 5 cut(s) 309, 1790, 2034, 2058, 2793
BssSI CACGAG 1 cut(s) 1343
BssT1I CCWWGG 5 cut(s) 309, 1790, 2034, 2058, 2793
Bst2BI CACGAG 1 cut(s) 1343
Bst2UI CCWGG 2 cut(s) 894, 2286
Bst4CI ACNGT 6 cut(s) 653, 793, 1895, 2316, 2719, 2911
Bst6I CTCTTC 2 cut(s) 1347, 2128
BstAFI CTTAAG 1 cut(s) 1307
BstAPI GCANNNNNTGC 2 cut(s) 305, 2180
BstBAI YACGTR 1 cut(s) 188
BstBI TTCGAA 1 cut(s) 1405
BstC8I GCNNGC 4 cut(s) 6, 450, 631, 1981
BstDSI CCRYGG 2 cut(s) 2034, 2058
BstEII GGTNACC 1 cut(s) 1468
BstF5I GGATG 3 cut(s) 1663, 1939, 2068
BstH2I RGCGCY 1 cut(s) 2268
BstHHI GCGC 2 cut(s) 661, 2267
BstMAI GTCTC 6 cut(s) 420, 799, 1010, 1421, 2433, 2708
BstMCI CGRYCG 1 cut(s) 270
BstMWI GCNNNNNNNGC 6 cut(s) 305, 830, 1181, 1394, 2180, 2224
BstNI CCWGG 2 cut(s) 894, 2286
BstNSI RCATGY 3 cut(s) 452, 1033, 2458
BstPI GGTNACC 1 cut(s) 1468
BstSCI CCNGG 3 cut(s) 892, 2284, 2357
BstSFI CTRYAG 3 cut(s) 367, 900, 1422
BstSLI GKGCMC 1 cut(s) 226
BstV1I GCAGC 5 cut(s) 1184, 1622, 1888, 2149, 2230
BstV2I GAAGAC 2 cut(s) 192, 1236
BstX2I RGATCY 2 cut(s) 411, 1214
BstXI CCANNNNNNTGG 1 cut(s) 808
BstYI RGATCY 2 cut(s) 411, 1214
Bsu15I ATCGAT 2 cut(s) 481, 1848
Bsu36I CCTNAGG 1 cut(s) 227
BsuI GTATCC 1 cut(s) 30
BsuRI GGCC 7 cut(s) 824, 949, 1013, 1648, 2299, 2516, 2903
BsuTUI ATCGAT 2 cut(s) 481, 1848
BtgI CCRYGG 2 cut(s) 2034, 2058
BtgZI GCGATG 2 cut(s) 371, 2902
BtsCI GGATG 3 cut(s) 1663, 1939, 2068
BtsI GCAGTG 1 cut(s) 561
BtsIMutI CAGTG 6 cut(s) 234, 448, 461, 561, 1639, 2524
Cac8I GCNNGC 4 cut(s) 6, 450, 631, 1981
CciI TCATGA 2 cut(s) 315, 1917
CfoI GCGC 2 cut(s) 661, 2267
Cfr13I GGNCC 1 cut(s) 1646
ClaI ATCGAT 2 cut(s) 481, 1848
CseI GACGC 1 cut(s) 305
Csp6I GTAC 9 cut(s) 431, 1266, 1302, 1376, 1391, 1668, 1787, 2765, 2831
CviQI GTAC 9 cut(s) 431, 1266, 1302, 1376, 1391, 1668, 1787, 2765, 2831
DriI GACNNNNNGTC 1 cut(s) 2783
EaeI YGGCCR 4 cut(s) 822, 947, 2514, 2901
Eam1104I CTCTTC 2 cut(s) 1347, 2128
Eam1105I GACNNNNNGTC 1 cut(s) 2783
EarI CTCTTC 2 cut(s) 1347, 2128
Ecl136II GAGCTC 1 cut(s) 2696
Eco130I CCWWGG 5 cut(s) 309, 1790, 2034, 2058, 2793
Eco24I GRGCYC 1 cut(s) 2698
Eco31I GGTCTC 2 cut(s) 799, 1421
Eco47III AGCGCT 1 cut(s) 2266
Eco53kI GAGCTC 1 cut(s) 2696
Eco57I CTGAAG 3 cut(s) 264, 1404, 1794
Eco72I CACGTG 1 cut(s) 188
Eco81I CCTNAGG 1 cut(s) 227
Eco88I CYCGRG 1 cut(s) 2639
Eco91I GGTNACC 1 cut(s) 1468
EcoICRI GAGCTC 1 cut(s) 2696
EcoO65I GGTNACC 1 cut(s) 1468
EcoRI GAATTC 4 cut(s) 372, 419, 965, 2926
EcoRII CCWGG 2 cut(s) 892, 2284
EcoT14I CCWWGG 5 cut(s) 309, 1790, 2034, 2058, 2793
EcoT22I ATGCAT 2 cut(s) 285, 1858
EcoT38I GRGCYC 1 cut(s) 2698
ErhI CCWWGG 5 cut(s) 309, 1790, 2034, 2058, 2793
Esp3I CGTCTC 3 cut(s) 420, 2433, 2708
FalI AAGNNNNNCTT 2 cut(s) 1149, 1181
FaqI GGGAC 6 cut(s) 57, 245, 761, 794, 1112, 2723
FauI CCCGC 1 cut(s) 1450
FbaI TGATCA 2 cut(s) 541, 720
FblI GTMKAC 4 cut(s) 87, 734, 1593, 2913
Fnu4HI GCNGC 8 cut(s) 950, 1173, 1611, 1902, 2138, 2219, 2514, 2889
FokI GGATG 3 cut(s) 1670, 1926, 2075
FriOI GRGCYC 1 cut(s) 2698
Fsp4HI GCNGC 8 cut(s) 950, 1173, 1611, 1902, 2138, 2219, 2514, 2889
FspI TGCGCA 1 cut(s) 660
GlaI GCGC 2 cut(s) 660, 2266
GluI GCNGC 8 cut(s) 950, 1173, 1611, 1902, 2138, 2219, 2514, 2889
GsaI CCCAGC 1 cut(s) 1647
GsuI CTGGAG 1 cut(s) 2243
HaeII RGCGCY 1 cut(s) 2268
HaeIII GGCC 7 cut(s) 824, 949, 1013, 1648, 2299, 2516, 2903
HapII CCGG 4 cut(s) 46, 2359, 2691, 2772
HgaI GACGC 1 cut(s) 305
HhaI GCGC 2 cut(s) 661, 2267
Hin6I GCGC 2 cut(s) 659, 2265
HinP1I GCGC 2 cut(s) 659, 2265
HincII GTYRAC 4 cut(s) 88, 1999, 2404, 2865
HindII GTYRAC 4 cut(s) 88, 1999, 2404, 2865
HindIII AAGCTT 2 cut(s) 169, 1439
HinfI GANTC 8 cut(s) 1059, 1241, 1324, 1360, 1934, 2071, 2236, 2637
HpaI GTTAAC 2 cut(s) 2404, 2865
HpaII CCGG 4 cut(s) 46, 2359, 2691, 2772
HphI GGTGA 6 cut(s) 338, 359, 789, 2258, 2596, 2761
Hpy99I CGWCG 2 cut(s) 1895, 2885
HpyAV CCTTC 5 cut(s) 808, 1458, 1493, 2441, 2489
HpyCH4III ACNGT 6 cut(s) 653, 793, 1895, 2316, 2719, 2911
HpyCH4IV ACGT 5 cut(s) 187, 429, 665, 2442, 2880
HpyF10VI GCNNNNNNNGC 6 cut(s) 305, 830, 1181, 1394, 2180, 2224
HpySE526I ACGT 5 cut(s) 187, 429, 665, 2442, 2880
HspAI GCGC 2 cut(s) 659, 2265
Kpn2I TCCGGA 1 cut(s) 2690
KpnI GGTACC 1 cut(s) 1790
Ksp22I TGATCA 2 cut(s) 541, 720
KspAI GTTAAC 2 cut(s) 2404, 2865
LmnI GCTCC 5 cut(s) 1696, 1909, 2224, 2693, 2885
Lsp1109I GCAGC 5 cut(s) 1184, 1622, 1888, 2149, 2230
LweI GCATC 6 cut(s) 181, 229, 292, 569, 670, 1843
MaeII ACGT 5 cut(s) 187, 429, 665, 2442, 2880
MbiI CCGCTC 1 cut(s) 1912
MfeI CAATTG 1 cut(s) 1652
MflI RGATCY 2 cut(s) 411, 1214
MhlI GDGCHC 3 cut(s) 226, 612, 2698
MlsI TGGCCA 2 cut(s) 824, 2903
MluNI TGGCCA 2 cut(s) 824, 2903
MlyI GAGTC 1 cut(s) 2631
MmeI TCCRAC 4 cut(s) 501, 1942, 2233, 2863
Mox20I TGGCCA 2 cut(s) 824, 2903
Mph1103I ATGCAT 2 cut(s) 285, 1858
MroI TCCGGA 1 cut(s) 2690
MroXI GAANNNNTTC 1 cut(s) 2391
MscI TGGCCA 2 cut(s) 824, 2903
MslI CAYNNNNRTG 8 cut(s) 116, 186, 506, 543, 1152, 1557, 2459, 2921
Msp20I TGGCCA 2 cut(s) 824, 2903
MspA1I CMGCKG 3 cut(s) 1457, 1643, 2221
MspCI CTTAAG 1 cut(s) 1307
MspI CCGG 4 cut(s) 46, 2359, 2691, 2772
MspR9I CCNGG 3 cut(s) 894, 2286, 2359
MunI CAATTG 1 cut(s) 1652
Mva1269I GAATGC 1 cut(s) 2593
MvaI CCWGG 2 cut(s) 894, 2286
MwoI GCNNNNNNNGC 6 cut(s) 305, 830, 1181, 1394, 2180, 2224
NciI CCSGG 1 cut(s) 2359
NcoI CCATGG 2 cut(s) 2034, 2058
NlaIV GGNNCC 4 cut(s) 1692, 1788, 2032, 2887
NmeAIII GCCGAG 1 cut(s) 1039
NmuCI GTSAC 3 cut(s) 970, 1777, 2602
NsbI TGCGCA 1 cut(s) 660
NsiI ATGCAT 2 cut(s) 285, 1858
NspI RCATGY 3 cut(s) 452, 1033, 2458
NspV TTCGAA 1 cut(s) 1405
PaeI GCATGC 1 cut(s) 452
PaeR7I CTCGAG 1 cut(s) 2639
PagI TCATGA 2 cut(s) 315, 1917
PciI ACATGT 1 cut(s) 2454
PcsI WCGNNNNNNNCGW 1 cut(s) 2646
PctI GAATGC 1 cut(s) 2593
PdmI GAANNNNTTC 1 cut(s) 2391
PfeI GAWTC 7 cut(s) 1059, 1241, 1324, 1360, 1934, 2071, 2236
PflFI GACNNNGTC 1 cut(s) 2042
PkrI GCNGC 8 cut(s) 951, 1174, 1612, 1903, 2139, 2220, 2515, 2890
Ple19I CGATCG 1 cut(s) 270
PleI GAGTC 1 cut(s) 2631
PmaCI CACGTG 1 cut(s) 188
PmlI CACGTG 1 cut(s) 188
PpsI GAGTC 1 cut(s) 2631
Ppu21I YACGTR 1 cut(s) 188
PscI ACATGT 1 cut(s) 2454
PshBI ATTAAT 2 cut(s) 942, 2292
Psp124BI GAGCTC 1 cut(s) 2698
Psp6I CCWGG 2 cut(s) 892, 2284
PspCI CACGTG 1 cut(s) 188
PspEI GGTNACC 1 cut(s) 1468
PspFI CCCAGC 1 cut(s) 1643
PspGI CCWGG 2 cut(s) 892, 2284
PspN4I GGNNCC 4 cut(s) 1692, 1788, 2032, 2887
PspPI GGNCC 1 cut(s) 1646
PspXI VCTCGAGB 1 cut(s) 2639
PstI CTGCAG 1 cut(s) 1426
PsuI RGATCY 2 cut(s) 411, 1214
PsyI GACNNNGTC 1 cut(s) 2042
PvuI CGATCG 1 cut(s) 270
PvuII CAGCTG 1 cut(s) 2221
RsaI GTAC 9 cut(s) 432, 1267, 1303, 1377, 1392, 1669, 1788, 2766, 2832
RsaNI GTAC 9 cut(s) 431, 1266, 1302, 1376, 1391, 1668, 1787, 2765, 2831
RseI CAYNNNNRTG 8 cut(s) 116, 186, 506, 543, 1152, 1557, 2459, 2921
SacI GAGCTC 1 cut(s) 2698
SalI GTCGAC 1 cut(s) 86
SatI GCNGC 8 cut(s) 950, 1173, 1611, 1902, 2138, 2219, 2514, 2889
Sau96I GGNCC 1 cut(s) 1646
SchI GAGTC 1 cut(s) 2631
ScrFI CCNGG 3 cut(s) 894, 2286, 2359
SduI GDGCHC 3 cut(s) 226, 612, 2698
SfaNI GCATC 6 cut(s) 181, 229, 292, 569, 670, 1843
SfcI CTRYAG 3 cut(s) 367, 900, 1422
Sfr274I CTCGAG 1 cut(s) 2639
SfuI TTCGAA 1 cut(s) 1405
SlaI CTCGAG 1 cut(s) 2639
SmiMI CAYNNNNRTG 8 cut(s) 116, 186, 506, 543, 1152, 1557, 2459, 2921
SmlI CTYRAG 7 cut(s) 166, 867, 1307, 1874, 2301, 2639, 2858
SmoI CTYRAG 7 cut(s) 166, 867, 1307, 1874, 2301, 2639, 2858
SpeI ACTAGT 1 cut(s) 2489
SphI GCATGC 1 cut(s) 452
SsiI CCGC 8 cut(s) 289, 950, 1457, 1641, 1904, 1912, 2513, 2889
SstI GAGCTC 1 cut(s) 2698
StyD4I CCNGG 3 cut(s) 892, 2284, 2357
StyI CCWWGG 5 cut(s) 309, 1790, 2034, 2058, 2793
TaaI ACNGT 6 cut(s) 653, 793, 1895, 2316, 2719, 2911
TaiI ACGT 5 cut(s) 190, 432, 668, 2445, 2883
TatI WGTACW 3 cut(s) 1265, 1301, 1390
TauI GCSGC 3 cut(s) 952, 2516, 2891
TfiI GAWTC 7 cut(s) 1059, 1241, 1324, 1360, 1934, 2071, 2236
TscAI CASTG 6 cut(s) 241, 448, 461, 561, 1639, 2524
TseFI GTSAC 3 cut(s) 970, 1777, 2602
TseI GCWGC 5 cut(s) 1172, 1610, 1901, 2137, 2218
Tsp45I GTSAC 3 cut(s) 970, 1777, 2602
TspGWI ACGGA 4 cut(s) 798, 1715, 2218, 2441
TspRI CASTG 6 cut(s) 241, 448, 461, 561, 1639, 2524
Tth111I GACNNNGTC 1 cut(s) 2042
Vha464I CTTAAG 1 cut(s) 1307
VspI ATTAAT 2 cut(s) 942, 2292
XceI RCATGY 3 cut(s) 452, 1033, 2458
XhoI CTCGAG 1 cut(s) 2639
XmaJI CCTAGG 1 cut(s) 1790
XmiI GTMKAC 4 cut(s) 87, 734, 1593, 2913
XmnI GAANNNNTTC 1 cut(s) 2391
Zsp2I ATGCAT 2 cut(s) 285, 1858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.