FvH4_7g04840

Argonaute

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0001623
Physical Location & Seq
Forward (+)
5262836 .. 5272803
9968 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g04840.t2

Sequence Viewer

Length: 2748 bp
ATGGGTTCTTCAAATCCCGAAGGATCTGAACTCCCCCCTCCTCCACCCATTCCGCCAAATGTTGTCCCAATTGTAGGAGGAGAAAAACCTCTTGAATTAATTAACAAACCAGCTCCTCCAAAACGAGTTCCCATGAAAAGGCCTGGCATTGGATCTCAAGGTCAAAAGATTTCACTTGTTACCAACCACTTCAAAGTGGGATTGAACAAATCTAATACTGAGTTTTACCATTATAGTATTGCCATGCAATATGATGATGGAACTGAAGTTGACGGGAAAGGCATTGGACGCAAGGTTCTTGACAAAGTTAAAGAGACATATATCTTGGAGCTGGAAAACAAGGAATTTGCTTATGATGGAGAGAAGAGCTTGTTCACTGTTGGCCAACTCCCTCGTAAACAACTTGAATTCACGGTTGTACTGAATGACATATCATCAAGCAGGTCTGGGACGAATGGGGTATCCGGAGGCAGTTACTCCCTCGAAGAGAGTCAGGGCGATAGGAAGAGAGTCAAGCAGTCATTTCAATCTAAAACAATACAAGTGCAGGTCAACTTTGCTGCCAAAATTTCAATGCAAGCAATTGCGAATGCCTTGCGAGGTCAGGACTCTGATCATTTTCAGGAAGTAGTTAGAGTTCTTGACATCATTATACGGCAGAATGCAGCAAAGCAGGGATGTCTCCTTGTTCTGCAGTCTTTCTTCCACAACAACCCAAGGAACTTCATAGAGTTGGGAGGAGGGGTGTTAGGCTGCAGGGGTTTCCATTCAAGCTTCCGGGCCACCCAAAGCGGCCTATCCCTGAATATGGATGTATCTACAACAATGATTGTAAAACCTGGTCCTGTTCTGAATTTCCTCATGGATAACCAAAATGTCAAAACTCCTTACCAGATTGATTGGATTAAGGCGAAGAGGATGCTAAAAAATCTAAAGGTTGAAACCTATGCCTCCAAGATGGAGTACAAAATCACTGGATTGAGTGACAAACCCTGCAAACAACTGACGTTCTTTCTGAAATCAAATCGAGGACAGGATGGAGATGGAGAAGAGATCACTGTTTATGAATACTTTGCCCAGCATAAGAACATGAGGTTACGCGATTCAGCAGATTTTCCCTGCATCAATGTTGGAAAACCAAAGAAACCGTCTTACTTTCCTATTGAGCTTTGTAATTTGGTTTCCTTGCAACGCTATACCAAGGCTTTATCCAATCTCCAAAGGGCTTCACTAGTGGAGAAGTCTCGGCAGAAGCCCCAAGAGCGAATGTCAACTTTGCGTGATGCAGTGAAGAGCAGTAAATATGAAGCTGACATGATGCTTCAGTCTTCTGGAATATCGATTGGTACAGAATTTATGCAGGTTGAAGGCCGTGTTTTGCCAGCCCCAAGGTTGGTAGTGGGAAATGGAGAGGATTTTTCTCCTCGGAATGGGAGATGGAACTTCAACAATAAGAAATTAGTAAAACCTGTAAAACTAGAGCGCTGGGCTGTTGTAAATTTCTCTGCTCGCTGTGACGTTCGCAACCTGGTCAACACTATGATAAAGTGTGGAAACATGAAAGGAATTTCCATCGACTCTCCATTTGATGTGTTTGAAGAAAGTAATCAGAATAGGCGTGAGTCAGCTCTGACTAGAGTAGAAAAGATGTTTGAATACATTAAGTCCAAACTTCCAGGACCTCCAAAGTTTCTGTTGTGCATTCTTTCAGAGAGGAAGAATTCAGACATATATGGTCCATGGAAAAGGAAATGCCTTTCAGAAGTTGGGACTGTAACACAGTGTATTGCACCTACTAAAGTGAATGATCAGTACATCACAAATGTGCTCCTGAAAATTAATGCAAAGCTTGATGGAATCAACTCCTTGCTAATGGTGGAGCATTCTCCTTCTCTGCCGTTGGTTTCCAAGTCACCCACTCTGATTTTAGGCATGGATGTGTCACATGGCTCACCCGGGCGTTCTGATGTGCCTTCTATTGCAGCGGTGGTCAGTTCCAGGAAATGGCCTTTGATTTCTTGTTACCGAGCTGCAGTTCGTACCCAATCACCGAAAGTAGAAATGATCGCTAATCTGTTCAAACCTGTGTCTGATAAAGAGGACCAAGGCATAATCAGGGAACTTTTGCTAGACTTTTATACTACTTCAAACAACAGGAAGCCGGAACAGATAATTATTTTCAGGGATGGAGTGAGTGAGTCTCAGTTCAACCAAGTTTTGAATGTAGAATTGGATCAGATTATTGAGGCCTGCAAGTTTCTTGATGAGAGCTGGTGTCCAAGGTTCATGGTTATTATTGCACAAAAGAATCATCACACAAAATTCTTCCAGGCTAGTGGTTCTCCTGACAATGTTCCACCTGGTACTATTATTGACAACAAAGTCTGTCATCCAAAGAACAATGATTTCTACTTATGTTCTCATGCTGGGATGATTGGTACAACTCGTCCTACTCATTATCATGTTCTCTATGATGAAGTTGGCTTCTCAGCGGATGACTTGCAAGAACTTGTTCATTCTTTATCATATGTTTACCAGAGGAGCACAACGGCCATATCTGTAGTTGCTCCAGTATGCTATGCTCATCTAGCTGCAGCTCAGATGAGTCAGTTTGTCAAGTTCAACGATATGTCAGAGACTGCTTCAAGCCAAGGTGGTTCTGGTGGTGTTACTGTTGCTGGAGCTGTGCCAGTGCAGGAATTACCAAGGCTGCATATAAAAGTTGCTAACTCCATGTTCTTCTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

916

Amino Acids

102.07

Weight (kDa)

9.13

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 55 - 218 8.9e-26 N-terminal domain of argonaute
ArgoL1 PF08699 231 - 279 2.5e-17 Argonaute linker 1 domain
PAZ PF02170 284 - 411 5.3e-28 PAZ domain
ArgoL2 PF16488 421 - 466 7.3e-10 Argonaute linker 2 domain
ArgoMid PF16487 474 - 555 1.1e-07 Mid domain of argonaute
Piwi PF02171 565 - 873 1.8e-105 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2381
Acc36I ACCTGC 3 cut(s) 432, 538, 1351
AccB7I CCANNNNNTGG 1 cut(s) 2004
AccII CGCG 1 cut(s) 1101
AccIII TCCGGA 1 cut(s) 464
AciI CCGC 4 cut(s) 53, 792, 1985, 2492
AclWI GGATC 3 cut(s) 31, 160, 2241
AcoI YGGCCR 2 cut(s) 382, 2550
AcsI RAATTY 9 cut(s) 344, 407, 567, 853, 1352, 1498, 1566, 1720, 2321
AcuI CTGAAG 2 cut(s) 285, 1307
AfaI GTAC 7 cut(s) 420, 965, 1348, 1814, 2041, 2365, 2440
AfeI AGCGCT 1 cut(s) 1484
AfiI CCNNNNNNNGG 7 cut(s) 74, 138, 149, 808, 1393, 1430, 2004
AhlI ACTAGT 1 cut(s) 1231
AjnI CCWGG 7 cut(s) 142, 838, 1527, 1675, 1997, 2328, 2359
AjuI GAANNNNNNNTTGG 2 cut(s) 2213, 2245
AleI CACNNNNGTG 1 cut(s) 1823
AloI GAACNNNNNNTCC 2 cut(s) 279, 311
Alw21I GWGCWC 2 cut(s) 1830, 2546
Alw26I GTCTC 5 cut(s) 308, 686, 1248, 2205, 2630
AlwI GGATC 3 cut(s) 31, 160, 2241
AlwNI CAGNNNCTG 1 cut(s) 2639
Ama87I CYCGRG 1 cut(s) 1955
Aor13HI TCCGGA 1 cut(s) 464
Aor51HI AGCGCT 1 cut(s) 1484
AoxI GGCC 8 cut(s) 140, 382, 780, 793, 1369, 2006, 2247, 2550
ApeKI GCWGC 8 cut(s) 560, 665, 753, 1982, 2030, 2591, 2594, 2710
ApoI RAATTY 9 cut(s) 344, 407, 567, 853, 1352, 1498, 1566, 1720, 2321
ArsI GACNNNNNNTTYG 4 cut(s) 1133, 1165, 1568, 1600
AseI ATTAAT 2 cut(s) 98, 1839
Asp700I GAANNNNTTC 1 cut(s) 2511
AspLEI GCGC 1 cut(s) 1485
AspS9I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
AsuC2I CCSGG 3 cut(s) 779, 1956, 1957
AsuHPI GGTGA 3 cut(s) 1905, 1944, 2040
AvaI CYCGRG 1 cut(s) 1955
AvaII GGWCC 4 cut(s) 842, 1679, 1736, 2101
BalI TGGCCA 1 cut(s) 384
BbsI GAAGAC 1 cut(s) 1320
Bbv12I GWGCWC 2 cut(s) 1830, 2546
BbvI GCAGC 8 cut(s) 547, 677, 740, 1994, 2017, 2578, 2606, 2697
BccI CCATC 9 cut(s) 251, 350, 952, 1031, 1037, 1431, 1580, 1847, 2180
BceAI ACGGC 4 cut(s) 671, 1356, 1882, 2565
BcgI CGANNNNNNTGC 4 cut(s) 577, 611, 901, 935
BciT130I CCWGG 7 cut(s) 144, 840, 1529, 1677, 1999, 2330, 2361
BciVI GTATCC 1 cut(s) 472
BclI TGATCA 2 cut(s) 613, 1807
BcnI CCSGG 3 cut(s) 779, 1956, 1957
BcoDI GTCTC 5 cut(s) 308, 686, 1248, 2205, 2630
BcuI ACTAGT 1 cut(s) 1231
BfaI CTAG 6 cut(s) 1232, 1478, 1635, 2129, 2334, 2588
BfmI CTRYAG 5 cut(s) 692, 754, 2031, 2559, 2592
BfoI RGCGCY 1 cut(s) 1486
BfuAI ACCTGC 3 cut(s) 432, 538, 1351
BfuI GTATCC 1 cut(s) 472
BisI GCNGC 9 cut(s) 561, 666, 754, 793, 1983, 2031, 2592, 2595, 2711
BlsI GCNGC 9 cut(s) 562, 667, 755, 794, 1984, 2032, 2593, 2596, 2712
Bme18I GGWCC 4 cut(s) 842, 1679, 1736, 2101
BmeT110I CYCGRG 1 cut(s) 1955
BmgT120I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
BmsI GCATC 4 cut(s) 909, 1131, 1273, 1308
BpiI GAAGAC 1 cut(s) 1320
BplI GAGNNNNNCTC 2 cut(s) 2185, 2217
BpmI CTGGAG 2 cut(s) 2553, 2700
BpuEI CTTGAG 1 cut(s) 141
BpuMI CCSGG 3 cut(s) 779, 1956, 1957
Bsa29I ATCGAT 1 cut(s) 1340
BsaWI WCCGGW 1 cut(s) 464
BsaXI ACNNNNNCTCC 2 cut(s) 729, 759
Bsc4I CCNNNNNNNGG 7 cut(s) 74, 138, 149, 808, 1393, 1430, 2004
Bse1I ACTGG 3 cut(s) 979, 2570, 2690
BseAI TCCGGA 1 cut(s) 464
BseBI CCWGG 7 cut(s) 144, 840, 1529, 1677, 1999, 2330, 2361
BseCI ATCGAT 1 cut(s) 1340
BseGI GGATG 9 cut(s) 683, 817, 924, 1042, 1942, 2191, 2389, 2436, 2500
BseLI CCNNNNNNNGG 7 cut(s) 74, 138, 149, 808, 1393, 1430, 2004
BseMII CTCAG 4 cut(s) 210, 2216, 2502, 2612
BseNI ACTGG 3 cut(s) 979, 2570, 2690
BseRI GAGGAG 6 cut(s) 30, 93, 105, 753, 1413, 2554
BseXI GCAGC 8 cut(s) 547, 677, 740, 1994, 2017, 2578, 2606, 2697
BseYI CCCAGC 3 cut(s) 1077, 1485, 2426
BsgI GTGCAG 2 cut(s) 566, 2714
Bsh1236I CGCG 1 cut(s) 1101
BshFI GGCC 8 cut(s) 142, 384, 782, 795, 1371, 2008, 2249, 2552
BshVI ATCGAT 1 cut(s) 1340
BsiHKAI GWGCWC 2 cut(s) 1830, 2546
BsiHKCI CYCGRG 1 cut(s) 1955
BsiSI CCGG 4 cut(s) 465, 778, 1956, 2162
BslFI GGGAC 3 cut(s) 50, 463, 1783
BslI CCNNNNNNNGG 7 cut(s) 74, 138, 149, 808, 1393, 1430, 2004
BsmAI GTCTC 5 cut(s) 308, 686, 1248, 2205, 2630
BsmFI GGGAC 3 cut(s) 50, 463, 1783
BsmI GAATGC 4 cut(s) 595, 667, 1701, 1882
BsnI GGCC 8 cut(s) 142, 384, 782, 795, 1371, 2008, 2249, 2552
BsoBI CYCGRG 1 cut(s) 1955
Bsp1286I GDGCHC 2 cut(s) 1830, 2546
Bsp13I TCCGGA 1 cut(s) 464
Bsp143I GATC 7 cut(s) 23, 152, 613, 1053, 1807, 2064, 2233
Bsp19I CCATGG 1 cut(s) 1739
BspACI CCGC 4 cut(s) 53, 792, 1985, 2492
BspANI GGCC 8 cut(s) 142, 384, 782, 795, 1371, 2008, 2249, 2552
BspCNI CTCAG 4 cut(s) 211, 2215, 2501, 2611
BspDI ATCGAT 1 cut(s) 1340
BspEI TCCGGA 1 cut(s) 464
BspFNI CGCG 1 cut(s) 1101
BspMAI CTGCAG 4 cut(s) 696, 758, 2035, 2596
BspMI ACCTGC 3 cut(s) 432, 538, 1351
BspPI GGATC 3 cut(s) 31, 160, 2241
BspQI GCTCTTC 2 cut(s) 359, 1286
BsrI ACTGG 3 cut(s) 979, 2570, 2690
BssMI GATC 7 cut(s) 23, 152, 613, 1053, 1807, 2064, 2233
BssT1I CCWWGG 8 cut(s) 716, 1200, 1388, 1739, 2104, 2279, 2650, 2705
Bst2UI CCWGG 7 cut(s) 144, 840, 1529, 1677, 1999, 2330, 2361
Bst4CI ACNGT 7 cut(s) 379, 415, 1060, 1149, 1774, 1782, 2674
Bst6I CTCTTC 6 cut(s) 359, 480, 500, 908, 1044, 1286
BstC8I GCNNGC 4 cut(s) 579, 1383, 1510, 2251
BstDEI CTNAG 4 cut(s) 219, 2202, 2488, 2598
BstDSI CCRYGG 1 cut(s) 1739
BstF5I GGATG 9 cut(s) 683, 817, 924, 1042, 1942, 2191, 2389, 2436, 2500
BstFNI CGCG 1 cut(s) 1101
BstH2I RGCGCY 1 cut(s) 1486
BstHHI GCGC 1 cut(s) 1485
BstKTI GATC 7 cut(s) 26, 155, 616, 1056, 1810, 2067, 2236
BstMAI GTCTC 5 cut(s) 308, 686, 1248, 2205, 2630
BstMBI GATC 7 cut(s) 23, 152, 613, 1053, 1807, 2064, 2233
BstMWI GCNNNNNNNGC 3 cut(s) 288, 1261, 2588
BstNI CCWGG 7 cut(s) 144, 840, 1529, 1677, 1999, 2330, 2361
BstSFI CTRYAG 5 cut(s) 692, 754, 2031, 2559, 2592
BstUI CGCG 1 cut(s) 1101
BstV1I GCAGC 8 cut(s) 547, 677, 740, 1994, 2017, 2578, 2606, 2697
BstV2I GAAGAC 1 cut(s) 1320
BstX2I RGATCY 2 cut(s) 23, 152
BstXI CCANNNNNNTGG 1 cut(s) 2336
BstYI RGATCY 2 cut(s) 23, 152
Bsu15I ATCGAT 1 cut(s) 1340
BsuI GTATCC 1 cut(s) 472
BsuRI GGCC 8 cut(s) 142, 384, 782, 795, 1371, 2008, 2249, 2552
BsuTUI ATCGAT 1 cut(s) 1340
BtgI CCRYGG 1 cut(s) 1739
BtsCI GGATG 9 cut(s) 683, 817, 924, 1042, 1942, 2191, 2389, 2436, 2500
BtsI GCAGTG 1 cut(s) 1293
BtsIMutI CAGTG 6 cut(s) 375, 972, 1056, 1293, 1787, 2697
BveI ACCTGC 3 cut(s) 432, 538, 1351
Cac8I GCNNGC 4 cut(s) 579, 1383, 1510, 2251
CaiI CAGNNNCTG 1 cut(s) 2639
CfoI GCGC 1 cut(s) 1485
Cfr13I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
Cfr9I CCCGGG 1 cut(s) 1955
ClaI ATCGAT 1 cut(s) 1340
CseI GACGC 1 cut(s) 297
CsiI ACCWGGT 3 cut(s) 838, 1527, 2359
Csp6I GTAC 7 cut(s) 419, 964, 1347, 1813, 2040, 2364, 2439
CviQI GTAC 7 cut(s) 419, 964, 1347, 1813, 2040, 2364, 2439
DdeI CTNAG 4 cut(s) 219, 2202, 2488, 2598
DpnI GATC 7 cut(s) 25, 154, 615, 1055, 1809, 2066, 2235
DpnII GATC 7 cut(s) 23, 152, 613, 1053, 1807, 2064, 2233
DrdI GACNNNNNNGTC 1 cut(s) 2381
DseDI GACNNNNNNGTC 1 cut(s) 2381
EaeI YGGCCR 2 cut(s) 382, 2550
Eam1104I CTCTTC 6 cut(s) 359, 480, 500, 908, 1044, 1286
EarI CTCTTC 6 cut(s) 359, 480, 500, 908, 1044, 1286
EciI GGCGGA 1 cut(s) 42
Eco130I CCWWGG 8 cut(s) 716, 1200, 1388, 1739, 2104, 2279, 2650, 2705
Eco147I AGGCCT 2 cut(s) 142, 2249
Eco47I GGWCC 4 cut(s) 842, 1679, 1736, 2101
Eco47III AGCGCT 1 cut(s) 1484
Eco57I CTGAAG 2 cut(s) 285, 1307
Eco88I CYCGRG 1 cut(s) 1955
EcoO109I RGGNCCY 1 cut(s) 1679
EcoRI GAATTC 2 cut(s) 407, 1720
EcoRII CCWGG 7 cut(s) 142, 838, 1527, 1675, 1997, 2328, 2359
EcoT14I CCWWGG 8 cut(s) 716, 1200, 1388, 1739, 2104, 2279, 2650, 2705
ErhI CCWWGG 8 cut(s) 716, 1200, 1388, 1739, 2104, 2279, 2650, 2705
FaqI GGGAC 3 cut(s) 50, 463, 1783
FauNDI CATATG 1 cut(s) 2527
FbaI TGATCA 2 cut(s) 613, 1807
Fnu4HI GCNGC 9 cut(s) 561, 666, 754, 793, 1983, 2031, 2592, 2595, 2711
FokI GGATG 9 cut(s) 690, 824, 931, 1049, 1949, 2198, 2376, 2443, 2507
Fsp4HI GCNGC 9 cut(s) 561, 666, 754, 793, 1983, 2031, 2592, 2595, 2711
FspBI CTAG 6 cut(s) 1232, 1478, 1635, 2129, 2334, 2588
GlaI GCGC 1 cut(s) 1484
GluI GCNGC 9 cut(s) 561, 666, 754, 793, 1983, 2031, 2592, 2595, 2711
GsaI CCCAGC 3 cut(s) 1081, 1489, 2430
GsuI CTGGAG 2 cut(s) 2553, 2700
HaeII RGCGCY 1 cut(s) 1486
HaeIII GGCC 8 cut(s) 142, 384, 782, 795, 1371, 2008, 2249, 2552
HapII CCGG 4 cut(s) 465, 778, 1956, 2162
HgaI GACGC 1 cut(s) 297
HhaI GCGC 1 cut(s) 1485
Hin6I GCGC 1 cut(s) 1483
HinP1I GCGC 1 cut(s) 1483
HincII GTYRAC 4 cut(s) 271, 553, 1272, 1534
HindII GTYRAC 4 cut(s) 271, 553, 1272, 1534
HindIII AAGCTT 2 cut(s) 772, 1847
HpaII CCGG 4 cut(s) 465, 778, 1956, 2162
HphI GGTGA 3 cut(s) 1905, 1944, 2040
Hpy166II GTNNAC 7 cut(s) 271, 375, 398, 553, 1272, 1534, 2533
Hpy8I GTNNAC 7 cut(s) 271, 375, 398, 553, 1272, 1534, 2533
HpyAV CCTTC 4 cut(s) 14, 1361, 1899, 1983
HpyCH4III ACNGT 7 cut(s) 379, 415, 1060, 1149, 1774, 1782, 2674
HpyCH4IV ACGT 2 cut(s) 1007, 1518
HpyF10VI GCNNNNNNNGC 3 cut(s) 288, 1261, 2588
HpyF3I CTNAG 4 cut(s) 219, 2202, 2488, 2598
HpySE526I ACGT 2 cut(s) 1007, 1518
HspAI GCGC 1 cut(s) 1483
Kpn2I TCCGGA 1 cut(s) 464
Ksp22I TGATCA 2 cut(s) 613, 1807
Kzo9I GATC 7 cut(s) 23, 152, 613, 1053, 1807, 2064, 2233
LguI GCTCTTC 2 cut(s) 359, 1286
LmnI GCTCC 7 cut(s) 118, 328, 1833, 1879, 2541, 2572, 2681
Lsp1109I GCAGC 8 cut(s) 547, 677, 740, 1994, 2017, 2578, 2606, 2697
LweI GCATC 4 cut(s) 909, 1131, 1273, 1308
MabI ACCWGGT 3 cut(s) 838, 1527, 2359
MaeI CTAG 6 cut(s) 1232, 1478, 1635, 2129, 2334, 2588
MaeII ACGT 2 cut(s) 1007, 1518
MalI GATC 7 cut(s) 25, 154, 615, 1055, 1809, 2066, 2235
MboI GATC 7 cut(s) 23, 152, 613, 1053, 1807, 2064, 2233
MfeI CAATTG 2 cut(s) 69, 582
MflI RGATCY 2 cut(s) 23, 152
MhlI GDGCHC 2 cut(s) 1830, 2546
MlsI TGGCCA 1 cut(s) 384
MluNI TGGCCA 1 cut(s) 384
MlyI GAGTC 7 cut(s) 499, 519, 602, 1571, 1631, 2207, 2614
MmeI TCCRAC 1 cut(s) 1111
Mox20I TGGCCA 1 cut(s) 384
MroI TCCGGA 1 cut(s) 464
MroXI GAANNNNTTC 1 cut(s) 2511
MscI TGGCCA 1 cut(s) 384
MseI TTAA 6 cut(s) 98, 102, 309, 906, 1662, 1839
MslI CAYNNNNRTG 3 cut(s) 1823, 1937, 2460
Msp20I TGGCCA 1 cut(s) 384
MspA1I CMGCKG 2 cut(s) 1985, 2492
MspI CCGG 4 cut(s) 465, 778, 1956, 2162
MunI CAATTG 2 cut(s) 69, 582
Mva1269I GAATGC 4 cut(s) 595, 667, 1701, 1882
MvaI CCWGG 7 cut(s) 144, 840, 1529, 1677, 1999, 2330, 2361
MvnI CGCG 1 cut(s) 1101
MwoI GCNNNNNNNGC 3 cut(s) 288, 1261, 2588
NciI CCSGG 3 cut(s) 779, 1956, 1957
NcoI CCATGG 1 cut(s) 1739
NdeI CATATG 1 cut(s) 2527
NdeII GATC 7 cut(s) 23, 152, 613, 1053, 1807, 2064, 2233
NmeAIII GCCGAG 1 cut(s) 1225
NmuCI GTSAC 4 cut(s) 983, 1514, 1911, 1941
OliI CACNNNNGTG 1 cut(s) 1823
PacI TTAATTAA 1 cut(s) 102
PceI AGGCCT 2 cut(s) 142, 2249
PciSI GCTCTTC 2 cut(s) 359, 1286
PctI GAATGC 4 cut(s) 595, 667, 1701, 1882
PdmI GAANNNNTTC 1 cut(s) 2511
PfeI GAWTC 3 cut(s) 1103, 1857, 2308
PflMI CCANNNNNTGG 1 cut(s) 2004
PfoI TCCNGGA 2 cut(s) 1675, 1997
PkrI GCNGC 9 cut(s) 562, 667, 755, 794, 1984, 2032, 2593, 2596, 2712
PleI GAGTC 7 cut(s) 498, 518, 602, 1571, 1630, 2206, 2613
PpsI GAGTC 7 cut(s) 498, 518, 602, 1571, 1630, 2206, 2613
PpuMI RGGWCCY 1 cut(s) 1679
PshBI ATTAAT 2 cut(s) 98, 1839
Psp5II RGGWCCY 1 cut(s) 1679
Psp6I CCWGG 7 cut(s) 142, 838, 1527, 1675, 1997, 2328, 2359
PspFI CCCAGC 3 cut(s) 1077, 1485, 2426
PspGI CCWGG 7 cut(s) 142, 838, 1527, 1675, 1997, 2328, 2359
PspPI GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
PspPPI RGGWCCY 1 cut(s) 1679
PsrI GAACNNNNNNTAC 2 cut(s) 621, 653
PstI CTGCAG 4 cut(s) 696, 758, 2035, 2596
PstNI CAGNNNCTG 1 cut(s) 2639
PsuI RGATCY 2 cut(s) 23, 152
RsaI GTAC 7 cut(s) 420, 965, 1348, 1814, 2041, 2365, 2440
RsaNI GTAC 7 cut(s) 419, 964, 1347, 1813, 2040, 2364, 2439
RseI CAYNNNNRTG 3 cut(s) 1823, 1937, 2460
SapI GCTCTTC 2 cut(s) 359, 1286
SaqAI TTAA 6 cut(s) 98, 102, 309, 906, 1662, 1839
SatI GCNGC 9 cut(s) 561, 666, 754, 793, 1983, 2031, 2592, 2595, 2711
Sau3AI GATC 7 cut(s) 23, 152, 613, 1053, 1807, 2064, 2233
Sau96I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
SchI GAGTC 7 cut(s) 499, 519, 602, 1571, 1631, 2207, 2614
SduI GDGCHC 2 cut(s) 1830, 2546
SexAI ACCWGGT 3 cut(s) 838, 1527, 2359
SfaNI GCATC 4 cut(s) 909, 1131, 1273, 1308
SfcI CTRYAG 5 cut(s) 692, 754, 2031, 2559, 2592
SinI GGWCC 4 cut(s) 842, 1679, 1736, 2101
SmaI CCCGGG 1 cut(s) 1957
SmiMI CAYNNNNRTG 3 cut(s) 1823, 1937, 2460
SmlI CTYRAG 1 cut(s) 156
SmoI CTYRAG 1 cut(s) 156
SpeI ACTAGT 1 cut(s) 1231
SseBI AGGCCT 2 cut(s) 142, 2249
SsiI CCGC 4 cut(s) 53, 792, 1985, 2492
SspMI CTAG 6 cut(s) 1232, 1478, 1635, 2129, 2334, 2588
StuI AGGCCT 2 cut(s) 142, 2249
StyI CCWWGG 8 cut(s) 716, 1200, 1388, 1739, 2104, 2279, 2650, 2705
TaaI ACNGT 7 cut(s) 379, 415, 1060, 1149, 1774, 1782, 2674
TaiI ACGT 2 cut(s) 1010, 1521
TaqI TCGA 4 cut(s) 483, 1027, 1340, 1575
TatI WGTACW 3 cut(s) 418, 963, 1812
TauI GCSGC 1 cut(s) 795
TfiI GAWTC 3 cut(s) 1103, 1857, 2308
Tru1I TTAA 6 cut(s) 98, 102, 309, 906, 1662, 1839
Tru9I TTAA 6 cut(s) 98, 102, 309, 906, 1662, 1839
TscAI CASTG 6 cut(s) 382, 979, 1063, 1293, 1787, 2697
TseFI GTSAC 4 cut(s) 983, 1514, 1911, 1941
TseI GCWGC 8 cut(s) 560, 665, 753, 1982, 2030, 2591, 2594, 2710
Tsp45I GTSAC 4 cut(s) 983, 1514, 1911, 1941
TspDTI ATGAA 8 cut(s) 149, 715, 1080, 1320, 1574, 2275, 2490, 2504
TspMI CCCGGG 1 cut(s) 1955
TspRI CASTG 6 cut(s) 382, 979, 1063, 1293, 1787, 2697
Van91I CCANNNNNTGG 1 cut(s) 2004
VpaK11BI GGWCC 4 cut(s) 842, 1679, 1736, 2101
VspI ATTAAT 2 cut(s) 98, 1839
XapI RAATTY 9 cut(s) 344, 407, 567, 853, 1352, 1498, 1566, 1720, 2321
XcmI CCANNNNNNNNNTGG 1 cut(s) 2657
XmaI CCCGGG 1 cut(s) 1955
XmnI GAANNNNTTC 1 cut(s) 2511
XspI CTAG 6 cut(s) 1232, 1478, 1635, 2129, 2334, 2588
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.