Argonaute
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G21030 AT5G21030 AT5G21150 |
| fragaria_vesca | FvH4_4g13080 FvH4_7g04840 FvH4_7g04840 |
| malus_domestica | MD07G1052200.v1.1 MD07G1052400.v1.1 |
| prunus_persica | Prupe.2G056600_v2.0.a1 Prupe.2G056700_v2.0.a1 |
| pyrus_communis | pycom07g04070 pycom07g04080 |
| rosa_chinensis | RchiOBHm_Chr1g0322921 RchiOBHm_Chr1g0330301 RchiOBHm_Chr4g0412801 RchiOBHm_Chr7g0206231 |
| rosa_laevigata | RLG00000008257 RLG00000029812 |
| rosa_multiflora | Rmu_sc0002224.1_g000009 Rmu_sc0011701.1_g000026 |
| rosa_roxburghii | Rroxscaffold_4G00319970 Rroxscaffold_5G00347500 Rroxscaffold_5G00357050 Rroxscaffold_7G00201260 Rroxscaffold_7G00201270 |
| rosa_rugosa | Rorug01G0088700 Rorug01G0088800 Rorug02G0651800 Rorug04G0117000 Rorug06G0108000 Rorug07G0164100 |
| rosa_samantha | Rh1AG106600 Rh1BG084900 Rh1BG159000 Rh1CG102600 Rh1DG110500 Rh1DG112200 Rh1DG189800 Rh3CG350500 Rh4AG175600 Rh4BG175500 Rh4CG186800 Rh4DG172500 Rh7DG234200 |
| rosa_wichuraiana | Rw0G011280 Rw1G008420 Rw1G008560 Rw4G014740 Rw7G030700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 728 |
| Acc36I | ACCTGC | 3 cut(s) | 535, 728, 1348 |
| Acc65I | GGTACC | 2 cut(s) | 1521, 2019 |
| AccB1I | GGYRCC | 2 cut(s) | 1521, 2019 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 275, 2001 |
| AccBSI | CCGCTC | 1 cut(s) | 1261 |
| AccI | GTMKAC | 1 cut(s) | 1638 |
| AccII | CGCG | 1 cut(s) | 1098 |
| AciI | CCGC | 6 cut(s) | 491, 1261, 1380, 1982, 2102, 2589 |
| AclWI | GGATC | 3 cut(s) | 163, 1571, 2238 |
| AcoI | YGGCCR | 1 cut(s) | 2676 |
| AcsI | RAATTY | 7 cut(s) | 347, 1438, 1717, 1858, 2218, 2252, 2318 |
| AcuI | CTGAAG | 1 cut(s) | 1307 |
| AfaI | GTAC | 7 cut(s) | 962, 1523, 1811, 1968, 2021, 2038, 2528 |
| AfeI | AGCGCT | 1 cut(s) | 1481 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 141, 152, 275, 1260, 1427, 2001 |
| AhlI | ACTAGT | 2 cut(s) | 1292, 2330 |
| AjiI | CACGTC | 1 cut(s) | 1616 |
| AjnI | CCWGG | 9 cut(s) | 145, 443, 460, 478, 835, 1524, 1672, 1951, 1994 |
| AleI | CACNNNNGTG | 1 cut(s) | 1820 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 989, 1021 |
| Alw21I | GWGCWC | 3 cut(s) | 1167, 1827, 2540 |
| Alw26I | GTCTC | 5 cut(s) | 683, 801, 1245, 2277, 2624 |
| AlwI | GGATC | 3 cut(s) | 163, 1571, 2238 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1628, 1690, 2001 |
| Ama87I | CYCGRG | 1 cut(s) | 2684 |
| Aor51HI | AGCGCT | 1 cut(s) | 1481 |
| AoxI | GGCC | 6 cut(s) | 143, 385, 1366, 2003, 2244, 2676 |
| ApeKI | GCWGC | 5 cut(s) | 662, 750, 1979, 2027, 2585 |
| ApoI | RAATTY | 7 cut(s) | 347, 1438, 1717, 1858, 2218, 2252, 2318 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1753, 1858, 2505 |
| Asp718I | GGTACC | 2 cut(s) | 1521, 2019 |
| AspLEI | GCGC | 2 cut(s) | 1098, 1482 |
| AspS9I | GGNCC | 5 cut(s) | 386, 839, 1676, 1733, 2004 |
| AsuC2I | CCSGG | 1 cut(s) | 2695 |
| AsuHPI | GGTGA | 5 cut(s) | 494, 1049, 1941, 1999, 2037 |
| AvaI | CYCGRG | 1 cut(s) | 2684 |
| AvaII | GGWCC | 3 cut(s) | 839, 1676, 1733 |
| BaeGI | GKGCMC | 2 cut(s) | 1913, 2685 |
| BanI | GGYRCC | 2 cut(s) | 1521, 2019 |
| BanII | GRGCYC | 2 cut(s) | 461, 1167 |
| BbsI | GAAGAC | 1 cut(s) | 1295 |
| Bbv12I | GWGCWC | 3 cut(s) | 1167, 1827, 2540 |
| BbvI | GCAGC | 5 cut(s) | 674, 737, 1991, 2014, 2572 |
| BceAI | ACGGC | 3 cut(s) | 1353, 1960, 2663 |
| BciT130I | CCWGG | 9 cut(s) | 147, 445, 462, 480, 837, 1526, 1674, 1953, 1996 |
| BciVI | GTATCC | 1 cut(s) | 215 |
| BclI | TGATCA | 3 cut(s) | 1804, 2161, 2712 |
| BcnI | CCSGG | 1 cut(s) | 2695 |
| BcoDI | GTCTC | 5 cut(s) | 683, 801, 1245, 2277, 2624 |
| BcuI | ACTAGT | 2 cut(s) | 1292, 2330 |
| BfaI | CTAG | 5 cut(s) | 1229, 1293, 2126, 2331, 2582 |
| BfmI | CTRYAG | 3 cut(s) | 751, 2028, 2541 |
| BfoI | RGCGCY | 1 cut(s) | 1483 |
| BfuAI | ACCTGC | 3 cut(s) | 535, 728, 1348 |
| BfuI | GTATCC | 1 cut(s) | 215 |
| BisI | GCNGC | 6 cut(s) | 663, 751, 1980, 2028, 2586, 2589 |
| BlsI | GCNGC | 6 cut(s) | 664, 752, 1981, 2029, 2587, 2590 |
| Bme18I | GGWCC | 3 cut(s) | 839, 1676, 1733 |
| BmeT110I | CYCGRG | 1 cut(s) | 2684 |
| BmgBI | CACGTC | 1 cut(s) | 1616 |
| BmgT120I | GGNCC | 5 cut(s) | 386, 839, 1676, 1733, 2004 |
| BmiI | GGNNCC | 4 cut(s) | 265, 458, 1523, 2021 |
| BmrI | ACTGGG | 2 cut(s) | 263, 462 |
| BmsI | GCATC | 6 cut(s) | 906, 1128, 1270, 1294, 1305, 2089 |
| BmuI | ACTGGG | 2 cut(s) | 263, 462 |
| BpiI | GAAGAC | 1 cut(s) | 1295 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2257, 2289, 2621, 2653 |
| BpmI | CTGGAG | 1 cut(s) | 483 |
| BpuEI | CTTGAG | 2 cut(s) | 1181, 2623 |
| BpuMI | CCSGG | 1 cut(s) | 2695 |
| BsaI | GGTCTC | 1 cut(s) | 2277 |
| BsaJI | CCNNGG | 8 cut(s) | 460, 478, 713, 784, 1736, 1952, 2644, 2693 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 726, 756, 989, 1019 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 141, 152, 275, 1260, 1427, 2001 |
| Bse1I | ACTGG | 7 cut(s) | 269, 457, 976, 1091, 1209, 2006, 2232 |
| Bse3DI | GCAATG | 2 cut(s) | 1181, 1782 |
| BseBI | CCWGG | 9 cut(s) | 147, 445, 462, 480, 837, 1526, 1674, 1953, 1996 |
| BseDI | CCNNGG | 8 cut(s) | 460, 478, 713, 784, 1736, 1952, 2644, 2693 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 141, 152, 275, 1260, 1427, 2001 |
| BseMI | GCAATG | 2 cut(s) | 1181, 1782 |
| BseMII | CTCAG | 4 cut(s) | 621, 1749, 2312, 2619 |
| BseNI | ACTGG | 7 cut(s) | 269, 457, 976, 1091, 1209, 2006, 2232 |
| BseRI | GAGGAG | 1 cut(s) | 27 |
| BseSI | GKGCMC | 2 cut(s) | 1913, 2685 |
| BseXI | GCAGC | 5 cut(s) | 674, 737, 1991, 2014, 2572 |
| BseYI | CCCAGC | 4 cut(s) | 1482, 1621, 1846, 2420 |
| BsgI | GTGCAG | 2 cut(s) | 563, 1376 |
| Bsh1236I | CGCG | 1 cut(s) | 1098 |
| BshFI | GGCC | 6 cut(s) | 145, 387, 1368, 2005, 2246, 2678 |
| BshNI | GGYRCC | 2 cut(s) | 1521, 2019 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1167, 1827, 2540 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2684 |
| BsiSI | CCGG | 1 cut(s) | 2695 |
| BslFI | GGGAC | 2 cut(s) | 53, 2446 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 141, 152, 275, 1260, 1427, 2001 |
| BsmAI | GTCTC | 5 cut(s) | 683, 801, 1245, 2277, 2624 |
| BsmFI | GGGAC | 2 cut(s) | 53, 2446 |
| BsmI | GAATGC | 2 cut(s) | 664, 1879 |
| BsnI | GGCC | 6 cut(s) | 145, 387, 1368, 2005, 2246, 2678 |
| Bso31I | GGTCTC | 1 cut(s) | 2277 |
| BsoBI | CYCGRG | 1 cut(s) | 2684 |
| Bsp1286I | GDGCHC | 6 cut(s) | 461, 1167, 1827, 1913, 2540, 2685 |
| Bsp143I | GATC | 7 cut(s) | 155, 825, 1576, 1804, 2161, 2230, 2712 |
| Bsp19I | CCATGG | 2 cut(s) | 1736, 2644 |
| BspACI | CCGC | 6 cut(s) | 491, 1261, 1380, 1982, 2102, 2589 |
| BspANI | GGCC | 6 cut(s) | 145, 387, 1368, 2005, 2246, 2678 |
| BspCNI | CTCAG | 4 cut(s) | 620, 1750, 2311, 2620 |
| BspFNI | CGCG | 1 cut(s) | 1098 |
| BspLI | GGNNCC | 4 cut(s) | 265, 458, 1523, 2021 |
| BspMAI | CTGCAG | 2 cut(s) | 755, 2032 |
| BspMI | ACCTGC | 3 cut(s) | 535, 728, 1348 |
| BspPI | GGATC | 3 cut(s) | 163, 1571, 2238 |
| BspT107I | GGYRCC | 2 cut(s) | 1521, 2019 |
| BspTNI | GGTCTC | 1 cut(s) | 2277 |
| BsrBI | CCGCTC | 1 cut(s) | 1261 |
| BsrDI | GCAATG | 2 cut(s) | 1181, 1782 |
| BsrI | ACTGG | 7 cut(s) | 269, 457, 976, 1091, 1209, 2006, 2232 |
| BssECI | CCNNGG | 8 cut(s) | 460, 478, 713, 784, 1736, 1952, 2644, 2693 |
| BssMI | GATC | 7 cut(s) | 155, 825, 1576, 1804, 2161, 2230, 2712 |
| BssT1I | CCWWGG | 3 cut(s) | 784, 1736, 2644 |
| Bst2UI | CCWGG | 9 cut(s) | 147, 445, 462, 480, 837, 1526, 1674, 1953, 1996 |
| Bst4CI | ACNGT | 7 cut(s) | 382, 693, 1057, 1779, 2202, 2604, 2662 |
| Bst6I | CTCTTC | 3 cut(s) | 396, 497, 1590 |
| BstC8I | GCNNGC | 6 cut(s) | 576, 1507, 2104, 2248, 2352, 2356 |
| BstDEI | CTNAG | 9 cut(s) | 607, 650, 929, 951, 1758, 1905, 2277, 2298, 2628 |
| BstDSI | CCRYGG | 2 cut(s) | 1736, 2644 |
| BstFNI | CGCG | 1 cut(s) | 1098 |
| BstH2I | RGCGCY | 1 cut(s) | 1483 |
| BstHHI | GCGC | 2 cut(s) | 1098, 1482 |
| BstKTI | GATC | 7 cut(s) | 158, 828, 1579, 1807, 2164, 2233, 2715 |
| BstMAI | GTCTC | 5 cut(s) | 683, 801, 1245, 2277, 2624 |
| BstMBI | GATC | 7 cut(s) | 155, 825, 1576, 1804, 2161, 2230, 2712 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1258, 2582 |
| BstNI | CCWGG | 9 cut(s) | 147, 445, 462, 480, 837, 1526, 1674, 1953, 1996 |
| BstSFI | CTRYAG | 3 cut(s) | 751, 2028, 2541 |
| BstSLI | GKGCMC | 2 cut(s) | 1913, 2685 |
| BstUI | CGCG | 1 cut(s) | 1098 |
| BstV1I | GCAGC | 5 cut(s) | 674, 737, 1991, 2014, 2572 |
| BstV2I | GAAGAC | 1 cut(s) | 1295 |
| BstX2I | RGATCY | 1 cut(s) | 155 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2554, 2651 |
| BstYI | RGATCY | 1 cut(s) | 155 |
| BsuI | GTATCC | 1 cut(s) | 215 |
| BsuRI | GGCC | 6 cut(s) | 145, 387, 1368, 2005, 2246, 2678 |
| BtgI | CCRYGG | 2 cut(s) | 1736, 2644 |
| BtgZI | GCGATG | 2 cut(s) | 39, 1416 |
| BtrI | CACGTC | 1 cut(s) | 1616 |
| BtsI | GCAGTG | 2 cut(s) | 210, 633 |
| BtsIMutI | CAGTG | 6 cut(s) | 210, 633, 969, 1098, 1283, 1784 |
| BveI | ACCTGC | 3 cut(s) | 535, 728, 1348 |
| Cac8I | GCNNGC | 6 cut(s) | 576, 1507, 2104, 2248, 2352, 2356 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1628, 1690, 2001 |
| CfoI | GCGC | 2 cut(s) | 1098, 1482 |
| Cfr13I | GGNCC | 5 cut(s) | 386, 839, 1676, 1733, 2004 |
| CsiI | ACCWGGT | 2 cut(s) | 835, 1524 |
| Csp6I | GTAC | 7 cut(s) | 961, 1522, 1810, 1967, 2020, 2037, 2527 |
| CviQI | GTAC | 7 cut(s) | 961, 1522, 1810, 1967, 2020, 2037, 2527 |
| DdeI | CTNAG | 9 cut(s) | 607, 650, 929, 951, 1758, 1905, 2277, 2298, 2628 |
| DpnI | GATC | 7 cut(s) | 157, 827, 1578, 1806, 2163, 2232, 2714 |
| DpnII | GATC | 7 cut(s) | 155, 825, 1576, 1804, 2161, 2230, 2712 |
| DraI | TTTAAA | 1 cut(s) | 537 |
| EaeI | YGGCCR | 1 cut(s) | 2676 |
| Eam1104I | CTCTTC | 3 cut(s) | 396, 497, 1590 |
| EarI | CTCTTC | 3 cut(s) | 396, 497, 1590 |
| EciI | GGCGGA | 1 cut(s) | 1369 |
| Ecl136II | GAGCTC | 1 cut(s) | 1165 |
| Eco130I | CCWWGG | 3 cut(s) | 784, 1736, 2644 |
| Eco147I | AGGCCT | 2 cut(s) | 145, 2246 |
| Eco24I | GRGCYC | 2 cut(s) | 461, 1167 |
| Eco31I | GGTCTC | 1 cut(s) | 2277 |
| Eco32I | GATATC | 1 cut(s) | 643 |
| Eco47I | GGWCC | 3 cut(s) | 839, 1676, 1733 |
| Eco47III | AGCGCT | 1 cut(s) | 1481 |
| Eco53kI | GAGCTC | 1 cut(s) | 1165 |
| Eco57I | CTGAAG | 1 cut(s) | 1307 |
| Eco88I | CYCGRG | 1 cut(s) | 2684 |
| EcoICRI | GAGCTC | 1 cut(s) | 1165 |
| EcoRI | GAATTC | 2 cut(s) | 1717, 1858 |
| EcoRII | CCWGG | 9 cut(s) | 145, 443, 460, 478, 835, 1524, 1672, 1951, 1994 |
| EcoRV | GATATC | 1 cut(s) | 643 |
| EcoT14I | CCWWGG | 3 cut(s) | 784, 1736, 2644 |
| EcoT22I | ATGCAT | 2 cut(s) | 592, 1121 |
| EcoT38I | GRGCYC | 2 cut(s) | 461, 1167 |
| ErhI | CCWWGG | 3 cut(s) | 784, 1736, 2644 |
| FaqI | GGGAC | 2 cut(s) | 53, 2446 |
| FauI | CCCGC | 2 cut(s) | 484, 2095 |
| FauNDI | CATATG | 2 cut(s) | 322, 2521 |
| FbaI | TGATCA | 3 cut(s) | 1804, 2161, 2712 |
| FblI | GTMKAC | 1 cut(s) | 1638 |
| Fnu4HI | GCNGC | 6 cut(s) | 663, 751, 1980, 2028, 2586, 2589 |
| FriOI | GRGCYC | 2 cut(s) | 461, 1167 |
| Fsp4HI | GCNGC | 6 cut(s) | 663, 751, 1980, 2028, 2586, 2589 |
| FspBI | CTAG | 5 cut(s) | 1229, 1293, 2126, 2331, 2582 |
| GlaI | GCGC | 2 cut(s) | 1097, 1481 |
| GluI | GCNGC | 6 cut(s) | 663, 751, 1980, 2028, 2586, 2589 |
| GsaI | CCCAGC | 4 cut(s) | 1486, 1625, 1850, 2424 |
| GsuI | CTGGAG | 1 cut(s) | 483 |
| HaeII | RGCGCY | 1 cut(s) | 1483 |
| HaeIII | GGCC | 6 cut(s) | 145, 387, 1368, 2005, 2246, 2678 |
| HapII | CCGG | 1 cut(s) | 2695 |
| HhaI | GCGC | 2 cut(s) | 1098, 1482 |
| Hin6I | GCGC | 2 cut(s) | 1096, 1480 |
| HinP1I | GCGC | 2 cut(s) | 1096, 1480 |
| HindIII | AAGCTT | 3 cut(s) | 370, 769, 1200 |
| HpaII | CCGG | 1 cut(s) | 2695 |
| HphI | GGTGA | 5 cut(s) | 494, 1049, 1941, 1999, 2037 |
| Hpy166II | GTNNAC | 4 cut(s) | 208, 378, 1639, 2527 |
| Hpy8I | GTNNAC | 4 cut(s) | 208, 378, 1639, 2527 |
| HpyAV | CCTTC | 4 cut(s) | 14, 1358, 1896, 1980 |
| HpyCH4III | ACNGT | 7 cut(s) | 382, 693, 1057, 1779, 2202, 2604, 2662 |
| HpyCH4IV | ACGT | 1 cut(s) | 1615 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1258, 2582 |
| HpyF3I | CTNAG | 9 cut(s) | 607, 650, 929, 951, 1758, 1905, 2277, 2298, 2628 |
| HpySE526I | ACGT | 1 cut(s) | 1615 |
| HspAI | GCGC | 2 cut(s) | 1096, 1480 |
| KpnI | GGTACC | 2 cut(s) | 1525, 2023 |
| Ksp22I | TGATCA | 3 cut(s) | 1804, 2161, 2712 |
| Kzo9I | GATC | 7 cut(s) | 155, 825, 1576, 1804, 2161, 2230, 2712 |
| Lsp1109I | GCAGC | 5 cut(s) | 674, 737, 1991, 2014, 2572 |
| LweI | GCATC | 6 cut(s) | 906, 1128, 1270, 1294, 1305, 2089 |
| MabI | ACCWGGT | 2 cut(s) | 835, 1524 |
| MaeI | CTAG | 5 cut(s) | 1229, 1293, 2126, 2331, 2582 |
| MaeII | ACGT | 1 cut(s) | 1615 |
| MaeIII | GTNAC | 9 cut(s) | 398, 980, 1424, 1511, 1616, 1771, 1938, 2656, 2688 |
| MalI | GATC | 7 cut(s) | 157, 827, 1578, 1806, 2163, 2232, 2714 |
| MbiI | CCGCTC | 1 cut(s) | 1261 |
| MboI | GATC | 7 cut(s) | 155, 825, 1576, 1804, 2161, 2230, 2712 |
| MfeI | CAATTG | 1 cut(s) | 579 |
| MflI | RGATCY | 1 cut(s) | 155 |
| MhlI | GDGCHC | 6 cut(s) | 461, 1167, 1827, 1913, 2540, 2685 |
| MlyI | GAGTC | 5 cut(s) | 14, 399, 599, 874, 1150 |
| MmeI | TCCRAC | 2 cut(s) | 712, 1415 |
| Mph1103I | ATGCAT | 2 cut(s) | 592, 1121 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1753, 1858, 2505 |
| MseI | TTAA | 9 cut(s) | 101, 105, 312, 510, 536, 876, 903, 1443, 1800 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1820, 2454, 2552, 2649, 2706 |
| MspA1I | CMGCKG | 2 cut(s) | 1982, 2354 |
| MspI | CCGG | 1 cut(s) | 2695 |
| MunI | CAATTG | 1 cut(s) | 579 |
| Mva1269I | GAATGC | 2 cut(s) | 664, 1879 |
| MvaI | CCWGG | 9 cut(s) | 147, 445, 462, 480, 837, 1526, 1674, 1953, 1996 |
| MvnI | CGCG | 1 cut(s) | 1098 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1258, 2582 |
| NciI | CCSGG | 1 cut(s) | 2695 |
| NcoI | CCATGG | 2 cut(s) | 1736, 2644 |
| NdeI | CATATG | 2 cut(s) | 322, 2521 |
| NdeII | GATC | 7 cut(s) | 155, 825, 1576, 1804, 2161, 2230, 2712 |
| NlaIV | GGNNCC | 4 cut(s) | 265, 458, 1523, 2021 |
| NmeAIII | GCCGAG | 1 cut(s) | 1222 |
| NmuCI | GTSAC | 5 cut(s) | 980, 1511, 1616, 1938, 2656 |
| NsiI | ATGCAT | 2 cut(s) | 592, 1121 |
| OliI | CACNNNNGTG | 1 cut(s) | 1820 |
| PacI | TTAATTAA | 1 cut(s) | 105 |
| PaqCI | CACCTGC | 1 cut(s) | 728 |
| PceI | AGGCCT | 2 cut(s) | 145, 2246 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1429 |
| PctI | GAATGC | 2 cut(s) | 664, 1879 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1753, 1858, 2505 |
| PfeI | GAWTC | 5 cut(s) | 172, 925, 1100, 2195, 2305 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 275, 2001 |
| PfoI | TCCNGGA | 2 cut(s) | 1672, 1994 |
| PkrI | GCNGC | 6 cut(s) | 664, 752, 1981, 2029, 2587, 2590 |
| PleI | GAGTC | 5 cut(s) | 13, 399, 599, 874, 1149 |
| PpsI | GAGTC | 5 cut(s) | 13, 399, 599, 874, 1149 |
| Psp124BI | GAGCTC | 1 cut(s) | 1167 |
| Psp6I | CCWGG | 9 cut(s) | 145, 443, 460, 478, 835, 1524, 1672, 1951, 1994 |
| PspFI | CCCAGC | 4 cut(s) | 1482, 1621, 1846, 2420 |
| PspGI | CCWGG | 9 cut(s) | 145, 443, 460, 478, 835, 1524, 1672, 1951, 1994 |
| PspN4I | GGNNCC | 4 cut(s) | 265, 458, 1523, 2021 |
| PspPI | GGNCC | 5 cut(s) | 386, 839, 1676, 1733, 2004 |
| PstI | CTGCAG | 2 cut(s) | 755, 2032 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1628, 1690, 2001 |
| PsuI | RGATCY | 1 cut(s) | 155 |
| PvuII | CAGCTG | 1 cut(s) | 2354 |
| RsaI | GTAC | 7 cut(s) | 962, 1523, 1811, 1968, 2021, 2038, 2528 |
| RsaNI | GTAC | 7 cut(s) | 961, 1522, 1810, 1967, 2020, 2037, 2527 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1820, 2454, 2552, 2649, 2706 |
| SacI | GAGCTC | 1 cut(s) | 1167 |
| SaqAI | TTAA | 9 cut(s) | 101, 105, 312, 510, 536, 876, 903, 1443, 1800 |
| SatI | GCNGC | 6 cut(s) | 663, 751, 1980, 2028, 2586, 2589 |
| Sau3AI | GATC | 7 cut(s) | 155, 825, 1576, 1804, 2161, 2230, 2712 |
| Sau96I | GGNCC | 5 cut(s) | 386, 839, 1676, 1733, 2004 |
| SchI | GAGTC | 5 cut(s) | 14, 399, 599, 874, 1150 |
| SduI | GDGCHC | 6 cut(s) | 461, 1167, 1827, 1913, 2540, 2685 |
| SexAI | ACCWGGT | 2 cut(s) | 835, 1524 |
| SfaNI | GCATC | 6 cut(s) | 906, 1128, 1270, 1294, 1305, 2089 |
| SfcI | CTRYAG | 3 cut(s) | 751, 2028, 2541 |
| SinI | GGWCC | 3 cut(s) | 839, 1676, 1733 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1820, 2454, 2552, 2649, 2706 |
| SmlI | CTYRAG | 2 cut(s) | 1160, 2638 |
| SmoI | CTYRAG | 2 cut(s) | 1160, 2638 |
| SpeI | ACTAGT | 2 cut(s) | 1292, 2330 |
| SseBI | AGGCCT | 2 cut(s) | 145, 2246 |
| SsiI | CCGC | 6 cut(s) | 491, 1261, 1380, 1982, 2102, 2589 |
| SspMI | CTAG | 5 cut(s) | 1229, 1293, 2126, 2331, 2582 |
| SstI | GAGCTC | 1 cut(s) | 1167 |
| StuI | AGGCCT | 2 cut(s) | 145, 2246 |
| StyI | CCWWGG | 3 cut(s) | 784, 1736, 2644 |
| TaaI | ACNGT | 7 cut(s) | 382, 693, 1057, 1779, 2202, 2604, 2662 |
| TaiI | ACGT | 1 cut(s) | 1618 |
| TaqI | TCGA | 4 cut(s) | 96, 408, 775, 2440 |
| TatI | WGTACW | 2 cut(s) | 960, 1809 |
| TauI | GCSGC | 1 cut(s) | 2591 |
| TfiI | GAWTC | 5 cut(s) | 172, 925, 1100, 2195, 2305 |
| Tru1I | TTAA | 9 cut(s) | 101, 105, 312, 510, 536, 876, 903, 1443, 1800 |
| Tru9I | TTAA | 9 cut(s) | 101, 105, 312, 510, 536, 876, 903, 1443, 1800 |
| TscAI | CASTG | 6 cut(s) | 210, 633, 976, 1098, 1290, 1784 |
| TseFI | GTSAC | 5 cut(s) | 980, 1511, 1616, 1938, 2656 |
| TseI | GCWGC | 5 cut(s) | 662, 750, 1979, 2027, 2585 |
| Tsp45I | GTSAC | 5 cut(s) | 980, 1511, 1616, 1938, 2656 |
| TspRI | CASTG | 6 cut(s) | 210, 633, 976, 1098, 1290, 1784 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 275, 2001 |
| VpaK11BI | GGWCC | 3 cut(s) | 839, 1676, 1733 |
| XapI | RAATTY | 7 cut(s) | 347, 1438, 1717, 1858, 2218, 2252, 2318 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1921 |
| XmiI | GTMKAC | 1 cut(s) | 1638 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1753, 1858, 2505 |
| XspI | CTAG | 5 cut(s) | 1229, 1293, 2126, 2331, 2582 |
| Zsp2I | ATGCAT | 2 cut(s) | 592, 1121 |