Rw1G008420

Argonaute

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0001623
Physical Location & Seq
Forward (+)
18225030 .. 18230919
5890 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G008420.1

Sequence Viewer

Length: 2766 bp
ATGGGTTCTTCAAATCCCGAAGGAGCCAAACTCCCCCCTCCTCCGCCCATTCCTCCAAATGTTGTCCCAATTGTAGCAGGAGAAAAACCTCTTGAACTAATTAACAAACCATCTCCTCCAAAACGTGTTCCTATGAAAAGGCCTGGCATTGGATCTAAAGGTCAAAGGATTTCACTTCTTACCAACCATTTCAAAGTGGGATTGAACATATCTAATGCTGAGTTTTACCATTATAGTATTGCCATGCAATATGATGATGGAACCGAAGTTGACGGGAAAGGCATTGGACGTAAGGTTCTTGACAAAGTAAAAGACACATATAGTGTGGAGCTGGAAAACAAGGATTTTGCTTATGATGGAGAGAAGAGCTTGTTTACTGTTGGGCAGCTCCCTCATAAAAAACTTGATTTCACAGTAGTACTGGATGACATATCATCAAGCAGGTCTAGGACGAATGGGGGATCTGGAGTCAGTTATTCCCTAGAAGGGAGTCAGGGCGATAGGAAGAGAGTCAAGCAGTCATTTCAATCCAAAACAATAAAGGTACAGGTCAACTTTGCTGCTAAAATCCCAATGCAAGCAATCGCGAATGCCTTGCGAGGTCAGGACTCTGACCATTTTCAGGAAGCAGTTAGAGTTCTTGACATCATTATAAGGCAGAATGCAGCAAAGCAGGGTTGTCTCCTTGTTCGGCAGTCTTTCTTCCATAACAACCTGAGGAACTTCATAGAGTTGGAAGGAGGGGTGTTAGGCTGCAGGGGTTTCCATTCAAGCTTCCGGGCCACACAAGGCGGCCTATCCCTGAATATGGATGTGTCCACTACAATGATTGTAAAACCTGGTCCTGTTTTGAATTTCCTCATGGAGAACCAGAATGTCAAAACTCCTTACCAGATTGATTGGAATAAGGCTAAAAGGATGCTAAAAAATCTAAAGGTTGAGACCTATGCTTCCAAGATGGAGTACAAAATCACTGGATTGAGTGATAAACCCTGCAAACAGCAGACGTTCTTTTTTAAATCAAAAGGAGGACAGGATGGAGATGGAGAAGAGATCACTGTTTATGAATACTTTGCCCAGCATAAGCACATGCAGTTACGTGATTCAGCAGATTTTCCCTGCATCAATGTTGGAAAACCAAAGAAACCTGCTTACTTTCCCCTAGAGCTTTGTAATTTGGTTTCCTTGCAACGCTATACCAAGGCTTTATCCAATCTCCAAAGGGCTTCACTAGTGGAGAAGTCTCGGCAGAAACCCCAGGAGCGAATGTCAACTTTGCGTGATGCACTGAAGAGTAGTAAATATGAGGCTGACATGATGCTTCAGTCTTCTGGAATATCGATGGGTACAGAATTTATGCAGGTTGAAGGCCGTGTTTTGTCAGCCCCAAGGTTGAAAGTGGGAAATGGAGAGGATTTTTCTCCTCGGAATGGGAGATGGAATTTCAACAATAAGAAATTAGTAGAACCTGTAAAACTAGAGCGCTGGGCTGTTGTAAATTTCTCTGCTCGCTGTAACGTTCGCTTCCTGATCAACACTATGATAAAGTGTGGAGACATGAAAGGAATTTCCATCAACCCTCCGTTTAATGTGTTTGAAGAGAGCATTCAGAATAGACGTGAGTCAGCTCTGAGTAGAGTAGAAAAGATGTTTGAATACATTAAGTCCAAACTTCCGGGACCACCTCAGTTTTTGTTGTGCATTCTTCCAGAGAGGAAGAATTCTGACATATATGGTCCATGGAAAAGGAAAAACCTTTCAGACGTTGGGATTGTAACACAGTGTATTGCACCAACTAAAGTGAATGATCAATACATCACAAATGTGCTTCTGAAAATTAATACAAAGCTTGGTGGAATCAACTCCTTGCTAATGGTGGAGCATTCTCCTTCTCTGCCCTTGGTTTCCAAGTCCCCCACTCTGATTTTAGGGATGGATGTGTCACATGGCTCACCTGGACGTTCTGATGTGCCTTCTATTGCAGCGGTGGTCAGTTCCAGGAAATGGCCTTTGATTTCTCGTTACCGAGCTGCAGTTCGTACTCAATCACCAAAAGTAGAAATGATTGCTAATCTGTTCAAGCCTGTGTCTGATAAAGAGGACCAAGGCATAATCAAGGAACTTTTGTTAGACTTTTATACTACTTCAAACAACAGGAAGCCAGAACAGATAATTATTTTCAGGGATGGAGTGAGTGAGTCACAGTTCAACCAAGTCTTGAATGTAGAATTGGAGCAGATTATTGAGGCCTGCAAGTTTCTTGATGAGAGCTGGTGTCCAAAGTTCATGGTTATTATTGCACAAAAGAATCATCATACAAAATTTTTTCAGGCTGGTGGTTCTCCCACAATGTTCCACCTGGTTAGTCACCTTACCATTGGGACTATTATTGACAACAAAGTCTGTCATCCAAAGAACAATGATTTCTACTTATGTTCTCATGCTGGGATGATTGGAACAACTCGTCCTACTCATTATCATGTTCTATATGATGAACTTGGCTTCTCAGCGGATGACTTGCAAGAACTTGTTCATTCTTTATCATATGTTTACCAAAGGAGCACAACGGCCATATCTGTAGTTGCTCCGGTATGCTATGCCCATCTAGCAGCAGCACAGATGAGTCAGTTTATTAAGTTCGACGAAACATCAGAGACTGCTTCAAGCCAAGGTGGTTCTGGTGGTGTTACTGTTGCTGGAGCTGTGCCAGTGCAGGAGTTACCAAGGCTACATGAAAGTGTCGTTGACTCCATGTTCTTCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

921

Amino Acids

102.89

Weight (kDa)

9.22

Isoelectric Point (pI)

39.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 55 - 218 2.6e-26 N-terminal domain of argonaute
ArgoL1 PF08699 230 - 279 4.2e-17 Argonaute linker 1 domain
PAZ PF02170 284 - 411 5.1e-28 PAZ domain
ArgoL2 PF16488 421 - 466 2.8e-08 Argonaute linker 2 domain
ArgoMid PF16487 474 - 555 1.4e-06 Mid domain of argonaute
Piwi PF02171 565 - 879 8.8e-105 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 653
AasI GACNNNNNNGTC 1 cut(s) 2399
Acc36I ACCTGC 3 cut(s) 432, 1156, 1351
AccB7I CCANNNNNTGG 1 cut(s) 2004
AccII CGCG 1 cut(s) 587
AciI CCGC 4 cut(s) 44, 792, 1985, 2510
AclI AACGTT 1 cut(s) 1518
AclWI GGATC 2 cut(s) 160, 469
AcoI YGGCCR 1 cut(s) 2568
AcsI RAATTY 7 cut(s) 853, 1352, 1441, 1498, 1566, 1720, 2321
AcuI CTGAAG 2 cut(s) 1307, 1310
AfaI GTAC 5 cut(s) 420, 546, 965, 1348, 2041
AfeI AGCGCT 1 cut(s) 1484
AfiI CCNNNNNNNGG 6 cut(s) 149, 486, 622, 808, 1430, 2004
AflIII ACRYGT 1 cut(s) 124
AhlI ACTAGT 1 cut(s) 1231
AjiI CACGTC 1 cut(s) 1619
AjnI CCWGG 6 cut(s) 142, 838, 1257, 1954, 1997, 2358
AjuI GAANNNNNNNTTGG 2 cut(s) 2213, 2245
AleI CACNNNNGTG 1 cut(s) 1823
AloI GAACNNNNNNTCC 4 cut(s) 279, 311, 2449, 2481
Alw21I GWGCWC 1 cut(s) 2564
Alw26I GTCTC 5 cut(s) 686, 935, 1248, 1548, 2648
AlwI GGATC 2 cut(s) 160, 469
AlwNI CAGNNNCTG 1 cut(s) 2657
Aor51HI AGCGCT 1 cut(s) 1484
AoxI GGCC 7 cut(s) 140, 780, 793, 1369, 2006, 2247, 2568
ApeKI GCWGC 8 cut(s) 385, 560, 665, 753, 1982, 2030, 2609, 2612
ApoI RAATTY 7 cut(s) 853, 1352, 1441, 1498, 1566, 1720, 2321
AseI ATTAAT 1 cut(s) 1839
Asp700I GAANNNNTTC 1 cut(s) 2529
AspLEI GCGC 1 cut(s) 1485
AspS9I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
AsuC2I CCSGG 2 cut(s) 779, 1677
AsuHPI GGTGA 3 cut(s) 1944, 2040, 2360
AvaII GGWCC 4 cut(s) 842, 1679, 1736, 2101
AxyI CCTNAGG 1 cut(s) 716
BbsI GAAGAC 1 cut(s) 1320
Bbv12I GWGCWC 1 cut(s) 2564
BbvI GCAGC 8 cut(s) 397, 547, 677, 740, 1994, 2017, 2621, 2624
BceAI ACGGC 2 cut(s) 1356, 2583
BcgI CGANNNNNNTGC 2 cut(s) 577, 611
BciT130I CCWGG 6 cut(s) 144, 840, 1259, 1956, 1999, 2360
BclI TGATCA 2 cut(s) 1530, 1807
BcnI CCSGG 2 cut(s) 779, 1677
BcoDI GTCTC 5 cut(s) 686, 935, 1248, 1548, 2648
BcuI ACTAGT 1 cut(s) 1231
BfaI CTAG 6 cut(s) 447, 482, 1163, 1232, 1478, 2606
BfmI CTRYAG 3 cut(s) 754, 2031, 2577
BfoI RGCGCY 1 cut(s) 1486
BfuAI ACCTGC 3 cut(s) 432, 1156, 1351
BisI GCNGC 9 cut(s) 386, 561, 666, 754, 793, 1983, 2031, 2610, 2613
BlsI GCNGC 9 cut(s) 387, 562, 667, 755, 794, 1984, 2032, 2611, 2614
BmcAI AGTACT 1 cut(s) 420
Bme1390I CCNGG 8 cut(s) 144, 779, 840, 1259, 1677, 1956, 1999, 2360
Bme18I GGWCC 4 cut(s) 842, 1679, 1736, 2101
BmgBI CACGTC 1 cut(s) 1619
BmgT120I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
BmiI GGNNCC 3 cut(s) 25, 262, 1680
BmrFI CCNGG 8 cut(s) 144, 779, 840, 1259, 1677, 1956, 1999, 2360
BmsI GCATC 4 cut(s) 909, 1131, 1273, 1308
BoxI GACNNNNGTC 1 cut(s) 1621
BpiI GAAGAC 1 cut(s) 1320
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BpmI CTGGAG 2 cut(s) 486, 2718
BpuMI CCSGG 2 cut(s) 779, 1677
Bsa29I ATCGAT 1 cut(s) 1340
BsaAI YACGTR 1 cut(s) 1100
BsaI GGTCTC 1 cut(s) 935
BsaJI CCNNGG 9 cut(s) 1200, 1257, 1388, 1424, 1739, 1899, 2104, 2668, 2723
BsaWI WCCGGW 1 cut(s) 2587
BsaXI ACNNNNNCTCC 2 cut(s) 1253, 1283
Bsc4I CCNNNNNNNGG 6 cut(s) 149, 486, 622, 808, 1430, 2004
Bse1I ACTGG 3 cut(s) 426, 979, 2708
Bse21I CCTNAGG 1 cut(s) 716
BseBI CCWGG 6 cut(s) 144, 840, 1259, 1956, 1999, 2360
BseCI ATCGAT 1 cut(s) 1340
BseDI CCNNGG 9 cut(s) 1200, 1257, 1388, 1424, 1739, 1899, 2104, 2668, 2723
BseLI CCNNNNNNNGG 6 cut(s) 149, 486, 622, 808, 1430, 2004
BseMII CTCAG 5 cut(s) 210, 707, 1622, 1700, 2520
BseNI ACTGG 3 cut(s) 426, 979, 2708
BseRI GAGGAG 3 cut(s) 30, 105, 1413
BseXI GCAGC 8 cut(s) 397, 547, 677, 740, 1994, 2017, 2621, 2624
BseYI CCCAGC 3 cut(s) 1077, 1485, 2444
BsgI GTGCAG 1 cut(s) 2732
Bsh1236I CGCG 1 cut(s) 587
BshFI GGCC 7 cut(s) 142, 782, 795, 1371, 2008, 2249, 2570
BshVI ATCGAT 1 cut(s) 1340
BsiHKAI GWGCWC 1 cut(s) 2564
BsiSI CCGG 3 cut(s) 778, 1676, 2588
BslFI GGGAC 4 cut(s) 50, 1692, 1897, 2395
BslI CCNNNNNNNGG 6 cut(s) 149, 486, 622, 808, 1430, 2004
BsmAI GTCTC 5 cut(s) 686, 935, 1248, 1548, 2648
BsmFI GGGAC 4 cut(s) 50, 1692, 1897, 2395
BsmI GAATGC 5 cut(s) 595, 667, 1605, 1701, 1882
BsnI GGCC 7 cut(s) 142, 782, 795, 1371, 2008, 2249, 2570
Bso31I GGTCTC 1 cut(s) 935
Bsp1286I GDGCHC 1 cut(s) 2564
Bsp143I GATC 5 cut(s) 152, 461, 1053, 1530, 1807
Bsp19I CCATGG 1 cut(s) 1739
Bsp68I TCGCGA 1 cut(s) 587
BspACI CCGC 4 cut(s) 44, 792, 1985, 2510
BspANI GGCC 7 cut(s) 142, 782, 795, 1371, 2008, 2249, 2570
BspCNI CTCAG 5 cut(s) 211, 708, 1623, 1699, 2519
BspDI ATCGAT 1 cut(s) 1340
BspFNI CGCG 1 cut(s) 587
BspLI GGNNCC 3 cut(s) 25, 262, 1680
BspMAI CTGCAG 2 cut(s) 758, 2035
BspMI ACCTGC 3 cut(s) 432, 1156, 1351
BspPI GGATC 2 cut(s) 160, 469
BspQI GCTCTTC 1 cut(s) 359
BspTNI GGTCTC 1 cut(s) 935
BsrI ACTGG 3 cut(s) 426, 979, 2708
BssECI CCNNGG 9 cut(s) 1200, 1257, 1388, 1424, 1739, 1899, 2104, 2668, 2723
BssMI GATC 5 cut(s) 152, 461, 1053, 1530, 1807
BssT1I CCWWGG 7 cut(s) 1200, 1388, 1739, 1899, 2104, 2668, 2723
Bst2UI CCWGG 6 cut(s) 144, 840, 1259, 1956, 1999, 2360
Bst4CI ACNGT 6 cut(s) 379, 415, 1060, 1782, 2205, 2692
Bst6I CTCTTC 5 cut(s) 359, 500, 1044, 1286, 1593
BstBAI YACGTR 1 cut(s) 1100
BstC8I GCNNGC 3 cut(s) 579, 1510, 2251
BstDEI CTNAG 5 cut(s) 219, 716, 1631, 1686, 2506
BstDSI CCRYGG 1 cut(s) 1739
BstFNI CGCG 1 cut(s) 587
BstH2I RGCGCY 1 cut(s) 1486
BstHHI GCGC 1 cut(s) 1485
BstKTI GATC 5 cut(s) 155, 464, 1056, 1533, 1810
BstMAI GTCTC 5 cut(s) 686, 935, 1248, 1548, 2648
BstMBI GATC 5 cut(s) 152, 461, 1053, 1530, 1807
BstMWI GCNNNNNNNGC 1 cut(s) 2606
BstNI CCWGG 6 cut(s) 144, 840, 1259, 1956, 1999, 2360
BstNSI RCATGY 1 cut(s) 1093
BstPAI GACNNNNGTC 1 cut(s) 1621
BstSCI CCNGG 8 cut(s) 142, 777, 838, 1257, 1675, 1954, 1997, 2358
BstSFI CTRYAG 3 cut(s) 754, 2031, 2577
BstUI CGCG 1 cut(s) 587
BstV1I GCAGC 8 cut(s) 397, 547, 677, 740, 1994, 2017, 2621, 2624
BstV2I GAAGAC 1 cut(s) 1320
BstX2I RGATCY 2 cut(s) 152, 461
BstYI RGATCY 2 cut(s) 152, 461
Bsu15I ATCGAT 1 cut(s) 1340
Bsu36I CCTNAGG 1 cut(s) 716
BsuRI GGCC 7 cut(s) 142, 782, 795, 1371, 2008, 2249, 2570
BsuTUI ATCGAT 1 cut(s) 1340
BtgI CCRYGG 1 cut(s) 1739
BtrI CACGTC 1 cut(s) 1619
BtsIMutI CAGTG 5 cut(s) 972, 1056, 1286, 1787, 2715
BtuMI TCGCGA 1 cut(s) 587
BveI ACCTGC 3 cut(s) 432, 1156, 1351
Cac8I GCNNGC 3 cut(s) 579, 1510, 2251
CaiI CAGNNNCTG 1 cut(s) 2657
CfoI GCGC 1 cut(s) 1485
Cfr13I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
ClaI ATCGAT 1 cut(s) 1340
CsiI ACCWGGT 2 cut(s) 838, 2358
Csp6I GTAC 5 cut(s) 419, 545, 964, 1347, 2040
CviQI GTAC 5 cut(s) 419, 545, 964, 1347, 2040
DdeI CTNAG 5 cut(s) 219, 716, 1631, 1686, 2506
DpnI GATC 5 cut(s) 154, 463, 1055, 1532, 1809
DpnII GATC 5 cut(s) 152, 461, 1053, 1530, 1807
DraI TTTAAA 1 cut(s) 1018
DrdI GACNNNNNNGTC 1 cut(s) 2399
DseDI GACNNNNNNGTC 1 cut(s) 2399
EaeI YGGCCR 1 cut(s) 2568
Eam1104I CTCTTC 5 cut(s) 359, 500, 1044, 1286, 1593
EarI CTCTTC 5 cut(s) 359, 500, 1044, 1286, 1593
EciI GGCGGA 1 cut(s) 33
Eco130I CCWWGG 7 cut(s) 1200, 1388, 1739, 1899, 2104, 2668, 2723
Eco147I AGGCCT 2 cut(s) 142, 2249
Eco31I GGTCTC 1 cut(s) 935
Eco47I GGWCC 4 cut(s) 842, 1679, 1736, 2101
Eco47III AGCGCT 1 cut(s) 1484
Eco57I CTGAAG 2 cut(s) 1307, 1310
Eco81I CCTNAGG 1 cut(s) 716
EcoRI GAATTC 1 cut(s) 1720
EcoRII CCWGG 6 cut(s) 142, 838, 1257, 1954, 1997, 2358
EcoT14I CCWWGG 7 cut(s) 1200, 1388, 1739, 1899, 2104, 2668, 2723
ErhI CCWWGG 7 cut(s) 1200, 1388, 1739, 1899, 2104, 2668, 2723
FaqI GGGAC 4 cut(s) 50, 1692, 1897, 2395
FauNDI CATATG 1 cut(s) 2545
FbaI TGATCA 2 cut(s) 1530, 1807
Fnu4HI GCNGC 9 cut(s) 386, 561, 666, 754, 793, 1983, 2031, 2610, 2613
Fsp4HI GCNGC 9 cut(s) 386, 561, 666, 754, 793, 1983, 2031, 2610, 2613
FspBI CTAG 6 cut(s) 447, 482, 1163, 1232, 1478, 2606
GlaI GCGC 1 cut(s) 1484
GluI GCNGC 9 cut(s) 386, 561, 666, 754, 793, 1983, 2031, 2610, 2613
GsaI CCCAGC 3 cut(s) 1081, 1489, 2448
GsuI CTGGAG 2 cut(s) 486, 2718
HaeII RGCGCY 1 cut(s) 1486
HaeIII GGCC 7 cut(s) 142, 782, 795, 1371, 2008, 2249, 2570
HapII CCGG 3 cut(s) 778, 1676, 2588
HhaI GCGC 1 cut(s) 1485
Hin6I GCGC 1 cut(s) 1483
HinP1I GCGC 1 cut(s) 1483
HincII GTYRAC 4 cut(s) 271, 553, 1272, 2746
HindII GTYRAC 4 cut(s) 271, 553, 1272, 2746
HindIII AAGCTT 2 cut(s) 772, 1847
HpaII CCGG 3 cut(s) 778, 1676, 2588
HphI GGTGA 3 cut(s) 1944, 2040, 2360
Hpy166II GTNNAC 7 cut(s) 271, 375, 553, 819, 1272, 2551, 2746
Hpy8I GTNNAC 7 cut(s) 271, 375, 553, 819, 1272, 2551, 2746
Hpy99I CGWCG 1 cut(s) 2645
HpyAV CCTTC 6 cut(s) 14, 479, 731, 1361, 1899, 1983
HpyCH4III ACNGT 6 cut(s) 379, 415, 1060, 1782, 2205, 2692
HpyCH4IV ACGT 8 cut(s) 124, 289, 1007, 1099, 1518, 1618, 1764, 1960
HpyF10VI GCNNNNNNNGC 1 cut(s) 2606
HpyF3I CTNAG 5 cut(s) 219, 716, 1631, 1686, 2506
HpySE526I ACGT 8 cut(s) 124, 289, 1007, 1099, 1518, 1618, 1764, 1960
HspAI GCGC 1 cut(s) 1483
Ksp22I TGATCA 2 cut(s) 1530, 1807
Kzo9I GATC 5 cut(s) 152, 461, 1053, 1530, 1807
LguI GCTCTTC 1 cut(s) 359
LmnI GCTCC 9 cut(s) 23, 328, 393, 1261, 1879, 2233, 2559, 2590, 2699
Lsp1109I GCAGC 8 cut(s) 397, 547, 677, 740, 1994, 2017, 2621, 2624
LweI GCATC 4 cut(s) 909, 1131, 1273, 1308
MabI ACCWGGT 2 cut(s) 838, 2358
MaeI CTAG 6 cut(s) 447, 482, 1163, 1232, 1478, 2606
MaeII ACGT 8 cut(s) 124, 289, 1007, 1099, 1518, 1618, 1764, 1960
MaeIII GTNAC 9 cut(s) 1095, 1514, 1774, 1941, 2021, 2199, 2366, 2686, 2718
MalI GATC 5 cut(s) 154, 463, 1055, 1532, 1809
MboI GATC 5 cut(s) 152, 461, 1053, 1530, 1807
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 2 cut(s) 152, 461
MhlI GDGCHC 1 cut(s) 2564
MlyI GAGTC 8 cut(s) 477, 499, 519, 602, 1631, 2207, 2632, 2741
MmeI TCCRAC 2 cut(s) 714, 1111
MroXI GAANNNNTTC 1 cut(s) 2529
MseI TTAA 6 cut(s) 102, 1017, 1587, 1662, 1839, 2634
MslI CAYNNNNRTG 4 cut(s) 824, 1823, 2478, 2736
MspA1I CMGCKG 2 cut(s) 1985, 2510
MspI CCGG 3 cut(s) 778, 1676, 2588
MspR9I CCNGG 8 cut(s) 144, 779, 840, 1259, 1677, 1956, 1999, 2360
MunI CAATTG 1 cut(s) 69
Mva1269I GAATGC 5 cut(s) 595, 667, 1605, 1701, 1882
MvaI CCWGG 6 cut(s) 144, 840, 1259, 1956, 1999, 2360
MvnI CGCG 1 cut(s) 587
MwoI GCNNNNNNNGC 1 cut(s) 2606
NciI CCSGG 2 cut(s) 779, 1677
NcoI CCATGG 1 cut(s) 1739
NdeI CATATG 1 cut(s) 2545
NdeII GATC 5 cut(s) 152, 461, 1053, 1530, 1807
NlaIV GGNNCC 3 cut(s) 25, 262, 1680
NmeAIII GCCGAG 1 cut(s) 1225
NmuCI GTSAC 3 cut(s) 1941, 2199, 2366
NruI TCGCGA 1 cut(s) 587
NspI RCATGY 1 cut(s) 1093
OliI CACNNNNGTG 1 cut(s) 1823
PceI AGGCCT 2 cut(s) 142, 2249
PciSI GCTCTTC 1 cut(s) 359
PctI GAATGC 5 cut(s) 595, 667, 1605, 1701, 1882
PdmI GAANNNNTTC 1 cut(s) 2529
PfeI GAWTC 3 cut(s) 1103, 1857, 2308
PflMI CCANNNNNTGG 1 cut(s) 2004
PfoI TCCNGGA 2 cut(s) 1675, 1997
PkrI GCNGC 9 cut(s) 387, 562, 667, 755, 794, 1984, 2032, 2611, 2614
PleI GAGTC 8 cut(s) 476, 498, 518, 602, 1630, 2206, 2631, 2741
PpsI GAGTC 8 cut(s) 476, 498, 518, 602, 1630, 2206, 2631, 2741
Ppu21I YACGTR 1 cut(s) 1100
PshAI GACNNNNGTC 1 cut(s) 1621
PshBI ATTAAT 1 cut(s) 1839
PsiI TTATAA 1 cut(s) 653
Psp1406I AACGTT 1 cut(s) 1518
Psp6I CCWGG 6 cut(s) 142, 838, 1257, 1954, 1997, 2358
PspFI CCCAGC 3 cut(s) 1077, 1485, 2444
PspGI CCWGG 6 cut(s) 142, 838, 1257, 1954, 1997, 2358
PspN4I GGNNCC 3 cut(s) 25, 262, 1680
PspPI GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
PstI CTGCAG 2 cut(s) 758, 2035
PstNI CAGNNNCTG 1 cut(s) 2657
PsuI RGATCY 2 cut(s) 152, 461
RruI TCGCGA 1 cut(s) 587
RsaI GTAC 5 cut(s) 420, 546, 965, 1348, 2041
RsaNI GTAC 5 cut(s) 419, 545, 964, 1347, 2040
RseI CAYNNNNRTG 4 cut(s) 824, 1823, 2478, 2736
SapI GCTCTTC 1 cut(s) 359
SaqAI TTAA 6 cut(s) 102, 1017, 1587, 1662, 1839, 2634
SatI GCNGC 9 cut(s) 386, 561, 666, 754, 793, 1983, 2031, 2610, 2613
Sau3AI GATC 5 cut(s) 152, 461, 1053, 1530, 1807
Sau96I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
ScaI AGTACT 1 cut(s) 420
SchI GAGTC 8 cut(s) 477, 499, 519, 602, 1631, 2207, 2632, 2741
ScrFI CCNGG 8 cut(s) 144, 779, 840, 1259, 1677, 1956, 1999, 2360
SduI GDGCHC 1 cut(s) 2564
SexAI ACCWGGT 2 cut(s) 838, 2358
SfaNI GCATC 4 cut(s) 909, 1131, 1273, 1308
SfcI CTRYAG 3 cut(s) 754, 2031, 2577
SinI GGWCC 4 cut(s) 842, 1679, 1736, 2101
SmiMI CAYNNNNRTG 4 cut(s) 824, 1823, 2478, 2736
SpeI ACTAGT 1 cut(s) 1231
SseBI AGGCCT 2 cut(s) 142, 2249
SsiI CCGC 4 cut(s) 44, 792, 1985, 2510
SspMI CTAG 6 cut(s) 447, 482, 1163, 1232, 1478, 2606
StuI AGGCCT 2 cut(s) 142, 2249
StyD4I CCNGG 8 cut(s) 142, 777, 838, 1257, 1675, 1954, 1997, 2358
StyI CCWWGG 7 cut(s) 1200, 1388, 1739, 1899, 2104, 2668, 2723
TaaI ACNGT 6 cut(s) 379, 415, 1060, 1782, 2205, 2692
TaiI ACGT 8 cut(s) 127, 292, 1010, 1102, 1521, 1621, 1767, 1963
TaqI TCGA 2 cut(s) 1340, 2640
TatI WGTACW 2 cut(s) 418, 963
TauI GCSGC 1 cut(s) 795
TfiI GAWTC 3 cut(s) 1103, 1857, 2308
Tru1I TTAA 6 cut(s) 102, 1017, 1587, 1662, 1839, 2634
Tru9I TTAA 6 cut(s) 102, 1017, 1587, 1662, 1839, 2634
TscAI CASTG 5 cut(s) 979, 1063, 1293, 1787, 2715
TseFI GTSAC 3 cut(s) 1941, 2199, 2366
TseI GCWGC 8 cut(s) 385, 560, 665, 753, 1982, 2030, 2609, 2612
Tsp45I GTSAC 3 cut(s) 1941, 2199, 2366
TspDTI ATGAA 8 cut(s) 149, 715, 1080, 1574, 2275, 2508, 2522, 2748
TspGWI ACGGA 1 cut(s) 1572
TspRI CASTG 5 cut(s) 979, 1063, 1293, 1787, 2715
Van91I CCANNNNNTGG 1 cut(s) 2004
VpaK11BI GGWCC 4 cut(s) 842, 1679, 1736, 2101
VspI ATTAAT 1 cut(s) 1839
XapI RAATTY 7 cut(s) 853, 1352, 1441, 1498, 1566, 1720, 2321
XceI RCATGY 1 cut(s) 1093
XcmI CCANNNNNNNNNTGG 1 cut(s) 2675
XmnI GAANNNNTTC 1 cut(s) 2529
XspI CTAG 6 cut(s) 447, 482, 1163, 1232, 1478, 2606
ZrmI AGTACT 1 cut(s) 420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.