Rh1AG106600

Argonaute

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0001623
Physical Location & Seq
Forward (+)
18559254 .. 18564164
4911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG106600.1

Sequence Viewer

Length: 2130 bp
ATGGGTTCTTCAAATCCCGAAGGAGCCGAACTCCCCCCTCCTCCGCCCGTTCCGCCAAACGTTGTCCCAATTGTAGCAGGAGAAAAACCTCTTGAACTAATTAACAAACCATCTCCTCCAAAACGTGTTCCCATGAAAAGGCCTGGCATTGGATCTAAAGGTCAAAGGATTTCACTTCTTACCAACCATTTCAAAGTGGGATTGAACATATCTAATGCTGAGTATTACCATTATAGTATTGCCATGCAATATGATGATGGAACCGAAGTTGACGGGAAAGGCATTGGACGTAAGGTTCTTGACAAAGTAAAAGACACATATAGTGTGGAGCTGGAAAACAAGGATTTTGCTTATGATGGAGAGAAGAGCTTGTTTACTGTTGGGCAGCTCCCTCATAAAAAACTTGATTTCACAGTAGTACTGGATGACATATCATCAAGCAGGTCTAGGACGAATGGGGGATCTGGAGGCAGTTATTCCCTAGCAGAGAGTCAGGGCGATAGGAAGAGAGTCAAGAAGTCATTTCAATCCAAAACAATAAAGGTACAGGTCAACTTTGCTGCTAAAATCCCAATGCAAGCAATCGCGAATGCCTTGCGAGGTCAGGACTCTGACCATTTTCAGGAAGCAGTTCGAGTTCTTGACATCATTATAAGGCAGAATGCAGCAAAGCAGGGTTGTCTCCTTGTTCGGCAGTCTTTCTTCCATAACAACCCGAGGAACTTCATAGAGTTGGGAGGAGGGGTGTTAGGCTGCAGGGGTTTCCATTCAAGCTTCCGGGCCACGCAAGGCGGCCTATCCCTGAATATGGATGTGTCCACTACAATGATTGTAAAACCTGGTCCTGTTTTGAATTTCCTCATGGAGAACCAGAATGTCAAAACTCCTTACCAGATTGATTGGAATAAGGCTAAGAGGATGCTAAAAAATCTAAAGGTTGAGACCTATGCTTCCAAGATGGAGTACAAAATCACTGGATTGAGTGATAAACCCTGCAAACAGCAGACGTTCTTTTTGAAATCGAAAGGAGGACAGGATGGAGATGGAGAAGAGATCACTGTTTATGAATACTTTGCCCAGCATAAGCACATGCAGTTACGTGATTCAGCAGATTTTCCCTGCATCAATGTTGGAAAACCAAAGAAACCTTCTTACTTTCCCCTAGAGCTTTGTAATTTGGTTTCCTTGCAACGCTATACCAAGGCTTTATCCAATCTCCAAAGGGCTTCACTAGTGGAGAAGTCTCGGCAGAAACCCCAGGAGCGAATGTCAACTTTGCGTGATGCACTGAAGAGTAGTAAATATGAGGCTGACATGATGCTTCAGTCTTCTGGAATATCGATTGGTACAGAATTTATGCAGGTTGAAGGCCGTGTTTTGTCAGCCCCAAGGTTGAAAGTGGGAAATGGAGAGGATTTTTCTCCTCGGAATGGGAGATGGAATTTCAACAATAAGAAATTAGTAGAACCTGTAAAACTAAAGCGCTGGGCTGTTGTAAATTTCTCTGCTCGCTGTGACGTTCGCTTCCTGGTCAACACTATGATAAAGTGTGGAGACATGAAAGGAATTTCTATCAACCCTCCGTTTGATGTGTTTGAAGAGAGCATTCAGAATAGACGTGAGTCAGCTCTGAGTAGAGTAGAAAAGATGTTTGAATACATTAAGTCCAAACTTCCGGGGCCACCTCACTTTTTGTTGTGCATTCTTCCAGAGAGGAAGAATTCTGACATATATGGTCCATGGAAAAGGAAAAACCTTTCAGACGTTGGGATTGTAACACAGTGTATTGCACCAACTAAAGTGAATGATCAATACATCACAAATGTGCTCCTGAAAATTAATACAAAGCTTGGTGGAATCAACTCCTTGCTAATGGTGGAGCATTCTCCTTCTCTGCCCTTGGTTTCCAAGTCCCCCACTCTGATTTTAGGGATGGATGTGTCACATGGCTCACCTGGACGTTCTGATGTGCCTTCTATTGCAGCGGTGGTCAGTTCCAGGAAATGGCCTTTGATTTCTCGTTACCGAGCTGCAGTTCGTACTCAATCACCAAAAGTAGAAATGATTGCTAATCTGTTCAAGCCTGTGTCTGATAAAGAGGACCAAGGCATAATCAAGGACTATTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

709

Amino Acids

79.21

Weight (kDa)

9.61

Isoelectric Point (pI)

38.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 55 - 218 4.2e-26 N-terminal domain of argonaute
ArgoL1 PF08699 230 - 279 1.7e-18 Argonaute linker 1 domain
PAZ PF02170 284 - 411 1.5e-28 PAZ domain
ArgoL2 PF16488 421 - 466 1.8e-09 Argonaute linker 2 domain
ArgoMid PF16487 474 - 555 6.9e-07 Mid domain of argonaute
Piwi PF02171 565 - 693 7.8e-32 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 653
Acc36I ACCTGC 2 cut(s) 432, 1351
AccB7I CCANNNNNTGG 1 cut(s) 2004
AccII CGCG 1 cut(s) 587
AciI CCGC 4 cut(s) 44, 53, 792, 1985
AclI AACGTT 1 cut(s) 60
AclWI GGATC 2 cut(s) 160, 469
AcsI RAATTY 6 cut(s) 853, 1352, 1441, 1498, 1566, 1720
AcuI CTGAAG 2 cut(s) 1307, 1310
AfaI GTAC 5 cut(s) 420, 546, 965, 1348, 2041
AfeI AGCGCT 1 cut(s) 1484
AfiI CCNNNNNNNGG 6 cut(s) 138, 149, 622, 808, 1430, 2004
AflIII ACRYGT 1 cut(s) 124
AhlI ACTAGT 1 cut(s) 1231
AjiI CACGTC 1 cut(s) 1619
AjnI CCWGG 6 cut(s) 142, 838, 1257, 1527, 1954, 1997
AjuI GAANNNNNNNTTGG 2 cut(s) 1132, 1164
AleI CACNNNNGTG 1 cut(s) 1823
AloI GAACNNNNNNTCC 2 cut(s) 279, 311
AluBI AGCT 8 cut(s) 331, 369, 388, 774, 1168, 1628, 1849, 2030
AluI AGCT 8 cut(s) 331, 369, 388, 774, 1168, 1628, 1849, 2030
Alw21I GWGCWC 1 cut(s) 1830
Alw26I GTCTC 4 cut(s) 686, 935, 1248, 1548
AlwI GGATC 2 cut(s) 160, 469
Ama87I CYCGRG 1 cut(s) 715
Aor51HI AGCGCT 1 cut(s) 1484
AoxI GGCC 6 cut(s) 140, 780, 793, 1369, 1679, 2006
ApeKI GCWGC 6 cut(s) 385, 560, 665, 753, 1982, 2030
ApoI RAATTY 6 cut(s) 853, 1352, 1441, 1498, 1566, 1720
ArsI GACNNNNNNTTYG 2 cut(s) 997, 1029
AseI ATTAAT 1 cut(s) 1839
Asp700I GAANNNNTTC 1 cut(s) 630
AspLEI GCGC 1 cut(s) 1485
AspS9I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
AsuC2I CCSGG 2 cut(s) 779, 1677
AsuHPI GGTGA 2 cut(s) 1944, 2040
AvaI CYCGRG 1 cut(s) 715
AvaII GGWCC 3 cut(s) 842, 1736, 2101
BbsI GAAGAC 1 cut(s) 1320
Bbv12I GWGCWC 1 cut(s) 1830
BbvI GCAGC 6 cut(s) 397, 547, 677, 740, 1994, 2017
BccI CCATC 8 cut(s) 118, 251, 350, 952, 1031, 1037, 1431, 1927
BceAI ACGGC 1 cut(s) 1356
BcgI CGANNNNNNTGC 2 cut(s) 577, 611
BciT130I CCWGG 6 cut(s) 144, 840, 1259, 1529, 1956, 1999
BclI TGATCA 1 cut(s) 1807
BcnI CCSGG 2 cut(s) 779, 1677
BcoDI GTCTC 4 cut(s) 686, 935, 1248, 1548
BcuI ACTAGT 1 cut(s) 1231
BfaI CTAG 4 cut(s) 447, 482, 1163, 1232
BfmI CTRYAG 2 cut(s) 754, 2031
BfoI RGCGCY 1 cut(s) 1486
BfuAI ACCTGC 2 cut(s) 432, 1351
BisI GCNGC 7 cut(s) 386, 561, 666, 754, 793, 1983, 2031
BlsI GCNGC 7 cut(s) 387, 562, 667, 755, 794, 1984, 2032
BmcAI AGTACT 1 cut(s) 420
Bme1390I CCNGG 8 cut(s) 144, 779, 840, 1259, 1529, 1677, 1956, 1999
Bme18I GGWCC 3 cut(s) 842, 1736, 2101
BmeT110I CYCGRG 1 cut(s) 715
BmgBI CACGTC 1 cut(s) 1619
BmgT120I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
BmiI GGNNCC 3 cut(s) 25, 262, 1680
BmrFI CCNGG 8 cut(s) 144, 779, 840, 1259, 1529, 1677, 1956, 1999
BmsI GCATC 4 cut(s) 909, 1131, 1273, 1308
BoxI GACNNNNGTC 1 cut(s) 1621
BpiI GAAGAC 1 cut(s) 1320
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BpmI CTGGAG 1 cut(s) 486
BpuMI CCSGG 2 cut(s) 779, 1677
Bsa29I ATCGAT 1 cut(s) 1340
BsaAI YACGTR 1 cut(s) 1100
BsaI GGTCTC 1 cut(s) 935
BsaJI CCNNGG 9 cut(s) 716, 1200, 1257, 1388, 1424, 1676, 1739, 1899, 2104
BsaXI ACNNNNNCTCC 4 cut(s) 729, 759, 1253, 1283
Bsc4I CCNNNNNNNGG 6 cut(s) 138, 149, 622, 808, 1430, 2004
Bse1I ACTGG 2 cut(s) 426, 979
BseBI CCWGG 6 cut(s) 144, 840, 1259, 1529, 1956, 1999
BseCI ATCGAT 1 cut(s) 1340
BseDI CCNNGG 9 cut(s) 716, 1200, 1257, 1388, 1424, 1676, 1739, 1899, 2104
BseGI GGATG 6 cut(s) 430, 817, 924, 1042, 1938, 1942
BseLI CCNNNNNNNGG 6 cut(s) 138, 149, 622, 808, 1430, 2004
BseMII CTCAG 2 cut(s) 210, 1622
BseNI ACTGG 2 cut(s) 426, 979
BseRI GAGGAG 4 cut(s) 30, 105, 753, 1413
BseXI GCAGC 6 cut(s) 397, 547, 677, 740, 1994, 2017
BseYI CCCAGC 2 cut(s) 1077, 1485
Bsh1236I CGCG 1 cut(s) 587
BshFI GGCC 6 cut(s) 142, 782, 795, 1371, 1681, 2008
BshVI ATCGAT 1 cut(s) 1340
BsiHKAI GWGCWC 1 cut(s) 1830
BsiHKCI CYCGRG 1 cut(s) 715
BsiSI CCGG 2 cut(s) 778, 1676
BslFI GGGAC 2 cut(s) 50, 1897
BslI CCNNNNNNNGG 6 cut(s) 138, 149, 622, 808, 1430, 2004
BsmAI GTCTC 4 cut(s) 686, 935, 1248, 1548
BsmFI GGGAC 2 cut(s) 50, 1897
BsmI GAATGC 5 cut(s) 595, 667, 1605, 1701, 1882
BsnI GGCC 6 cut(s) 142, 782, 795, 1371, 1681, 2008
Bso31I GGTCTC 1 cut(s) 935
BsoBI CYCGRG 1 cut(s) 715
Bsp1286I GDGCHC 1 cut(s) 1830
Bsp143I GATC 4 cut(s) 152, 461, 1053, 1807
Bsp19I CCATGG 1 cut(s) 1739
Bsp68I TCGCGA 1 cut(s) 587
BspACI CCGC 4 cut(s) 44, 53, 792, 1985
BspANI GGCC 6 cut(s) 142, 782, 795, 1371, 1681, 2008
BspCNI CTCAG 2 cut(s) 211, 1623
BspDI ATCGAT 1 cut(s) 1340
BspFNI CGCG 1 cut(s) 587
BspLI GGNNCC 3 cut(s) 25, 262, 1680
BspMAI CTGCAG 2 cut(s) 758, 2035
BspMI ACCTGC 2 cut(s) 432, 1351
BspPI GGATC 2 cut(s) 160, 469
BspQI GCTCTTC 1 cut(s) 359
BspTNI GGTCTC 1 cut(s) 935
BsrI ACTGG 2 cut(s) 426, 979
BssECI CCNNGG 9 cut(s) 716, 1200, 1257, 1388, 1424, 1676, 1739, 1899, 2104
BssMI GATC 4 cut(s) 152, 461, 1053, 1807
BssT1I CCWWGG 5 cut(s) 1200, 1388, 1739, 1899, 2104
Bst2UI CCWGG 6 cut(s) 144, 840, 1259, 1529, 1956, 1999
Bst4CI ACNGT 4 cut(s) 379, 415, 1060, 1782
Bst6I CTCTTC 5 cut(s) 359, 500, 1044, 1286, 1593
BstBAI YACGTR 1 cut(s) 1100
BstC8I GCNNGC 2 cut(s) 579, 1510
BstDEI CTNAG 3 cut(s) 219, 912, 1631
BstDSI CCRYGG 1 cut(s) 1739
BstF5I GGATG 6 cut(s) 430, 817, 924, 1042, 1938, 1942
BstFNI CGCG 1 cut(s) 587
BstH2I RGCGCY 1 cut(s) 1486
BstHHI GCGC 1 cut(s) 1485
BstKTI GATC 4 cut(s) 155, 464, 1056, 1810
BstMAI GTCTC 4 cut(s) 686, 935, 1248, 1548
BstMBI GATC 4 cut(s) 152, 461, 1053, 1807
BstMWI GCNNNNNNNGC 1 cut(s) 52
BstNI CCWGG 6 cut(s) 144, 840, 1259, 1529, 1956, 1999
BstNSI RCATGY 1 cut(s) 1093
BstPAI GACNNNNGTC 1 cut(s) 1621
BstSCI CCNGG 8 cut(s) 142, 777, 838, 1257, 1527, 1675, 1954, 1997
BstSFI CTRYAG 2 cut(s) 754, 2031
BstUI CGCG 1 cut(s) 587
BstV1I GCAGC 6 cut(s) 397, 547, 677, 740, 1994, 2017
BstV2I GAAGAC 1 cut(s) 1320
BstX2I RGATCY 2 cut(s) 152, 461
BstYI RGATCY 2 cut(s) 152, 461
Bsu15I ATCGAT 1 cut(s) 1340
BsuRI GGCC 6 cut(s) 142, 782, 795, 1371, 1681, 2008
BsuTUI ATCGAT 1 cut(s) 1340
BtgI CCRYGG 1 cut(s) 1739
BtrI CACGTC 1 cut(s) 1619
BtsCI GGATG 6 cut(s) 430, 817, 924, 1042, 1938, 1942
BtsIMutI CAGTG 4 cut(s) 972, 1056, 1286, 1787
BtuMI TCGCGA 1 cut(s) 587
BveI ACCTGC 2 cut(s) 432, 1351
Cac8I GCNNGC 2 cut(s) 579, 1510
CfoI GCGC 1 cut(s) 1485
Cfr13I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
ClaI ATCGAT 1 cut(s) 1340
CsiI ACCWGGT 1 cut(s) 838
Csp6I GTAC 5 cut(s) 419, 545, 964, 1347, 2040
CviAII CATG 8 cut(s) 133, 244, 862, 1090, 1315, 1558, 1740, 1946
CviQI GTAC 5 cut(s) 419, 545, 964, 1347, 2040
DdeI CTNAG 3 cut(s) 219, 912, 1631
DpnI GATC 4 cut(s) 154, 463, 1055, 1809
DpnII GATC 4 cut(s) 152, 461, 1053, 1807
Eam1104I CTCTTC 5 cut(s) 359, 500, 1044, 1286, 1593
EarI CTCTTC 5 cut(s) 359, 500, 1044, 1286, 1593
EciI GGCGGA 2 cut(s) 33, 42
Eco130I CCWWGG 5 cut(s) 1200, 1388, 1739, 1899, 2104
Eco147I AGGCCT 1 cut(s) 142
Eco31I GGTCTC 1 cut(s) 935
Eco47I GGWCC 3 cut(s) 842, 1736, 2101
Eco47III AGCGCT 1 cut(s) 1484
Eco57I CTGAAG 2 cut(s) 1307, 1310
Eco88I CYCGRG 1 cut(s) 715
EcoRI GAATTC 1 cut(s) 1720
EcoRII CCWGG 6 cut(s) 142, 838, 1257, 1527, 1954, 1997
EcoT14I CCWWGG 5 cut(s) 1200, 1388, 1739, 1899, 2104
ErhI CCWWGG 5 cut(s) 1200, 1388, 1739, 1899, 2104
FaeI CATG 8 cut(s) 136, 247, 865, 1093, 1318, 1561, 1743, 1949
FaqI GGGAC 2 cut(s) 50, 1897
FatI CATG 8 cut(s) 132, 243, 861, 1089, 1314, 1557, 1739, 1945
FbaI TGATCA 1 cut(s) 1807
Fnu4HI GCNGC 7 cut(s) 386, 561, 666, 754, 793, 1983, 2031
FokI GGATG 6 cut(s) 437, 824, 931, 1049, 1945, 1949
Fsp4HI GCNGC 7 cut(s) 386, 561, 666, 754, 793, 1983, 2031
FspBI CTAG 4 cut(s) 447, 482, 1163, 1232
GlaI GCGC 1 cut(s) 1484
GluI GCNGC 7 cut(s) 386, 561, 666, 754, 793, 1983, 2031
GsaI CCCAGC 2 cut(s) 1081, 1489
GsuI CTGGAG 1 cut(s) 486
HaeII RGCGCY 1 cut(s) 1486
HaeIII GGCC 6 cut(s) 142, 782, 795, 1371, 1681, 2008
HapII CCGG 2 cut(s) 778, 1676
HhaI GCGC 1 cut(s) 1485
Hin1II CATG 8 cut(s) 136, 247, 865, 1093, 1318, 1561, 1743, 1949
Hin6I GCGC 1 cut(s) 1483
HinP1I GCGC 1 cut(s) 1483
HincII GTYRAC 4 cut(s) 271, 553, 1272, 1534
HindII GTYRAC 4 cut(s) 271, 553, 1272, 1534
HindIII AAGCTT 2 cut(s) 772, 1847
HinfI GANTC 6 cut(s) 490, 510, 608, 1103, 1622, 1857
HpaII CCGG 2 cut(s) 778, 1676
HphI GGTGA 2 cut(s) 1944, 2040
Hpy166II GTNNAC 6 cut(s) 271, 375, 553, 819, 1272, 1534
Hpy188I TCNGA 9 cut(s) 613, 1428, 1611, 1632, 1726, 1762, 1923, 1966, 2092
Hpy8I GTNNAC 6 cut(s) 271, 375, 553, 819, 1272, 1534
HpyAV CCTTC 5 cut(s) 14, 1158, 1361, 1899, 1983
HpyCH4III ACNGT 4 cut(s) 379, 415, 1060, 1782
HpyCH4IV ACGT 9 cut(s) 60, 124, 289, 1007, 1099, 1518, 1618, 1764, 1960
HpyF10VI GCNNNNNNNGC 1 cut(s) 52
HpyF3I CTNAG 3 cut(s) 219, 912, 1631
HpySE526I ACGT 9 cut(s) 60, 124, 289, 1007, 1099, 1518, 1618, 1764, 1960
Hsp92II CATG 8 cut(s) 136, 247, 865, 1093, 1318, 1561, 1743, 1949
HspAI GCGC 1 cut(s) 1483
Ksp22I TGATCA 1 cut(s) 1807
Kzo9I GATC 4 cut(s) 152, 461, 1053, 1807
LguI GCTCTTC 1 cut(s) 359
LmnI GCTCC 6 cut(s) 23, 328, 393, 1261, 1833, 1879
Lsp1109I GCAGC 6 cut(s) 397, 547, 677, 740, 1994, 2017
LweI GCATC 4 cut(s) 909, 1131, 1273, 1308
MabI ACCWGGT 1 cut(s) 838
MaeI CTAG 4 cut(s) 447, 482, 1163, 1232
MaeII ACGT 9 cut(s) 60, 124, 289, 1007, 1099, 1518, 1618, 1764, 1960
MaeIII GTNAC 5 cut(s) 1095, 1514, 1774, 1941, 2021
MalI GATC 4 cut(s) 154, 463, 1055, 1809
MboI GATC 4 cut(s) 152, 461, 1053, 1807
MboII GAAGA 9 cut(s) 376, 517, 694, 1061, 1303, 1320, 1610, 1697, 1729
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 2 cut(s) 152, 461
MhlI GDGCHC 1 cut(s) 1830
MlyI GAGTC 4 cut(s) 499, 519, 602, 1631
MmeI TCCRAC 1 cut(s) 1111
MroXI GAANNNNTTC 1 cut(s) 630
MseI TTAA 3 cut(s) 102, 1662, 1839
MslI CAYNNNNRTG 2 cut(s) 824, 1823
MspA1I CMGCKG 1 cut(s) 1985
MspI CCGG 2 cut(s) 778, 1676
MspR9I CCNGG 8 cut(s) 144, 779, 840, 1259, 1529, 1677, 1956, 1999
MunI CAATTG 1 cut(s) 69
Mva1269I GAATGC 5 cut(s) 595, 667, 1605, 1701, 1882
MvaI CCWGG 6 cut(s) 144, 840, 1259, 1529, 1956, 1999
MvnI CGCG 1 cut(s) 587
MwoI GCNNNNNNNGC 1 cut(s) 52
NciI CCSGG 2 cut(s) 779, 1677
NcoI CCATGG 1 cut(s) 1739
NdeII GATC 4 cut(s) 152, 461, 1053, 1807
NlaIII CATG 8 cut(s) 136, 247, 865, 1093, 1318, 1561, 1743, 1949
NlaIV GGNNCC 3 cut(s) 25, 262, 1680
NmeAIII GCCGAG 1 cut(s) 1225
NmuCI GTSAC 2 cut(s) 1514, 1941
NruI TCGCGA 1 cut(s) 587
NspI RCATGY 1 cut(s) 1093
OliI CACNNNNGTG 1 cut(s) 1823
PceI AGGCCT 1 cut(s) 142
PciSI GCTCTTC 1 cut(s) 359
PctI GAATGC 5 cut(s) 595, 667, 1605, 1701, 1882
PdmI GAANNNNTTC 1 cut(s) 630
PfeI GAWTC 2 cut(s) 1103, 1857
PflMI CCANNNNNTGG 1 cut(s) 2004
PfoI TCCNGGA 1 cut(s) 1997
PkrI GCNGC 7 cut(s) 387, 562, 667, 755, 794, 1984, 2032
PleI GAGTC 4 cut(s) 498, 518, 602, 1630
PpsI GAGTC 4 cut(s) 498, 518, 602, 1630
Ppu21I YACGTR 1 cut(s) 1100
PshAI GACNNNNGTC 1 cut(s) 1621
PshBI ATTAAT 1 cut(s) 1839
PsiI TTATAA 1 cut(s) 653
Psp1406I AACGTT 1 cut(s) 60
Psp6I CCWGG 6 cut(s) 142, 838, 1257, 1527, 1954, 1997
PspFI CCCAGC 2 cut(s) 1077, 1485
PspGI CCWGG 6 cut(s) 142, 838, 1257, 1527, 1954, 1997
PspN4I GGNNCC 3 cut(s) 25, 262, 1680
PspPI GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
PstI CTGCAG 2 cut(s) 758, 2035
PsuI RGATCY 2 cut(s) 152, 461
RruI TCGCGA 1 cut(s) 587
RsaI GTAC 5 cut(s) 420, 546, 965, 1348, 2041
RsaNI GTAC 5 cut(s) 419, 545, 964, 1347, 2040
RseI CAYNNNNRTG 2 cut(s) 824, 1823
SapI GCTCTTC 1 cut(s) 359
SaqAI TTAA 3 cut(s) 102, 1662, 1839
SatI GCNGC 7 cut(s) 386, 561, 666, 754, 793, 1983, 2031
Sau3AI GATC 4 cut(s) 152, 461, 1053, 1807
Sau96I GGNCC 5 cut(s) 780, 842, 1679, 1736, 2101
ScaI AGTACT 1 cut(s) 420
SchI GAGTC 4 cut(s) 499, 519, 602, 1631
ScrFI CCNGG 8 cut(s) 144, 779, 840, 1259, 1529, 1677, 1956, 1999
SduI GDGCHC 1 cut(s) 1830
SexAI ACCWGGT 1 cut(s) 838
SfaNI GCATC 4 cut(s) 909, 1131, 1273, 1308
SfcI CTRYAG 2 cut(s) 754, 2031
SinI GGWCC 3 cut(s) 842, 1736, 2101
SmiMI CAYNNNNRTG 2 cut(s) 824, 1823
SpeI ACTAGT 1 cut(s) 1231
SseBI AGGCCT 1 cut(s) 142
SsiI CCGC 4 cut(s) 44, 53, 792, 1985
SspMI CTAG 4 cut(s) 447, 482, 1163, 1232
StuI AGGCCT 1 cut(s) 142
StyD4I CCNGG 8 cut(s) 142, 777, 838, 1257, 1527, 1675, 1954, 1997
StyI CCWWGG 5 cut(s) 1200, 1388, 1739, 1899, 2104
TaaI ACNGT 4 cut(s) 379, 415, 1060, 1782
TaiI ACGT 9 cut(s) 63, 127, 292, 1010, 1102, 1521, 1621, 1767, 1963
TaqI TCGA 3 cut(s) 634, 1022, 1340
TatI WGTACW 2 cut(s) 418, 963
TauI GCSGC 1 cut(s) 795
TfiI GAWTC 2 cut(s) 1103, 1857
Tru1I TTAA 3 cut(s) 102, 1662, 1839
Tru9I TTAA 3 cut(s) 102, 1662, 1839
TscAI CASTG 4 cut(s) 979, 1063, 1293, 1787
TseFI GTSAC 2 cut(s) 1514, 1941
TseI GCWGC 6 cut(s) 385, 560, 665, 753, 1982, 2030
Tsp45I GTSAC 2 cut(s) 1514, 1941
TspDTI ATGAA 4 cut(s) 149, 715, 1080, 1574
TspGWI ACGGA 1 cut(s) 1572
TspRI CASTG 4 cut(s) 979, 1063, 1293, 1787
Van91I CCANNNNNTGG 1 cut(s) 2004
VpaK11BI GGWCC 3 cut(s) 842, 1736, 2101
VspI ATTAAT 1 cut(s) 1839
XapI RAATTY 6 cut(s) 853, 1352, 1441, 1498, 1566, 1720
XceI RCATGY 1 cut(s) 1093
XmnI GAANNNNTTC 1 cut(s) 630
XspI CTAG 4 cut(s) 447, 482, 1163, 1232
ZrmI AGTACT 1 cut(s) 420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.