Rroxscaffold_4G00319970

Argonaute

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001623
Physical Location & Seq
Reverse (-)
48168831 .. 48176537
7707 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00319970.1

Sequence Viewer

Length: 2334 bp
ATGAGAAACGTGACGGTTCAAGGAAATGGGTTCTTCAAATCCCGAAGGAGCCGAACTCCCCCTCCTCCGCCCATTCCGCCAAATGTTGTCCCAATTGTAGCAGGAGAAAAACCTCTTGGACTAATTAACAAACCATCTCATCCAAAACGTGTTCCCATGAAGAGGCCTGGCATTGGATCTAAAGGTCAAAGGATTTCACTTCTTACCAACCATTTCAAAGTGGGATTGAACAAATCTAATGCTGACTTTTACCATTATAGTATTGCCATGCAATATGATGATGGAACCGAAGTTGACGGGAAAGGCATTGGACGTAAGTTTAGTGGTTATTTTGCACACAGGTCTAGGACGAATGGGGGATCTGGAGGCAGTTACTCCCTAGAAGAGAGTCAGGGCGATAGGAAGAGAGTCAAGCAGTCATTTCAATCCAAAACAATAAAGGTGCAGGTCAACTTTGCTGCTAAAATCCCAATGCAAGCAATCGCGAATGCCTTGCGAGGTCAGGACTCTGACCATTTTCAGGAAGCAATTAGAGTTCTTGACATCATTATAAGGCAGAATGCAGCAAAGCAGGGTTGTCTCCTTGTTCGGCAGTCTTTCTTCCATAACAACCCAAGGAACTTCATTGAATTGGGAGGAGGGGTGTTAGGCTGCAGGGGTTTCCATTCAAGCTTCCGGGCCACGCAAGGCGGCCTATCCCTGAATATGGATGTGTCCACTACAATGATTGTAAAACCTGGTCCTGTTTTGAATTTCCTCATGGAGAACCAGAATGTCAAAACTCCTTACCAGATTGATTGGAATAAGGCTAAGAGGATGCTGAAAAATCTGAAGGTTGAGACCTATGCTTCCAAGATGGAGTACAAAATCACTGGATTGACTGATAAACCCTGCAAACAGCAGACGTTCTTTTTGAAATCAAAAGGAGGACAGGATGGAGAAGAGATCACTGTTTATGAGTACTTTGCCCAGCATAAGCACATGCAGTTACGCGATTCAGCAGATTTTCCCTGCATCAATGTTGGAAAACCAAAGAAACCTTCTTACTTTCCTCTTGAGCTTTGTAATTTGGTTTCCTTGCAACGATATACCAAGGCTTTATCCAATCTCCAAAGGGCTTCACTAGTGGAGAAGTCTCGGCAAAAACCCCAGGAGCGAATGTCAACTTTGCGTGATGCACTGAAGAGTAGTAAATATGAGGCTGACATGATGCTTCACTCTTCTGGAATATCGATTGGTACAGAATTTATGCAGGTTGAAGGCCGTGTTTTGTCAGCCCCAAGGTTGAAAGTGGGAAATGGAGAGGATTTTTCTCCTCGGAATGGGAGATGGAATTTCAACAACAAGAAATTAGTAGAACCTGTAAAACTAGAGCGCTGGGCTGTTGTAAATTTCTCTGCCCGCTGTGACGTTCGCTTCCTGGTCAACACTATGATAAATTGTGGAGACATGAAAGGAATTCTTGGTGGAATCAACTCCTTGCTAATGGTGGAGCATTCTCCTTCTCTGCCCTTGGTTTCCAAGTCCCCCACTCTGATTTTAGGGATGGATGTGTCACATGGCTCACCTGGACGTTCCGATGTGCCTTCTATTGCAGCGATTGTTGCTGTATTATGTTACGAATTACATATTAAAAGGGGGAATTTTGTAGGTGGTCAGTTCCAGGAAATGGCCTTTGATTTCTCGTTACCGAGCGGCAGTTCGGAACTTTTGTTAGACTTTTATACTACTTCAAACAACAGGAAGCCAGAACAGATAATTATTTTCAGGGATGGAGTGAGTGAGTCACAGTTCAACCAAGTCTTGAATGTAGAATTGGATCAGATTATTGAGGCCTGCAAGTTTCTTGATGAGAGCTGGTGTCCAAAGTTCATGGTTATTATTGCACAAAAGAATCATCATACAAAATTTTTTCAGGCTGGTGGTTCTCCTGATAATGTTCCACCTGGGACTATTATTGACAACAAAGTCTGTCATCCAAAGAACAATGATTTCTACTTATGTTCTCATGCTGGGATGATTGGAACAACTCGCCCTACTCATTATCATGTTCTATATGATGAACTTGGCTTCTCAGCTGATGACTTGCAAGAACTTGTTCATTCTTTATCATATGTTTACCAAAGGAGCACAACGGCCATATCTGTAGTTGCTCCGGTATGCTATGCCCATCTAGCAGCAGCACAGATGAGTCAGTTTATTAAGTTCGATGAAATATCAGAGACTTCTTCAAGCCAAGGTGGTTCTGGTGGTGTTACTGTTGCTGGAGCTGTGCCAGTGCAGGAGTTACCAAGGCTACATAAAAGTGTCGTCAACTCCATGTTCTTCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

777

Amino Acids

86.4

Weight (kDa)

9.37

Isoelectric Point (pI)

42.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 63 - 184 1.9e-11 N-terminal domain of argonaute
ArgoL1 PF08699 196 - 245 1.9e-18 Argonaute linker 1 domain
PAZ PF02170 250 - 375 7.4e-29 PAZ domain
ArgoL2 PF16488 385 - 430 5.5e-09 Argonaute linker 2 domain
Piwi PF02171 488 - 735 4.8e-83 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 551
AasI GACNNNNNNGTC 1 cut(s) 1967
Acc36I ACCTGC 2 cut(s) 436, 1243
AccB7I CCANNNNNTGG 1 cut(s) 1669
AccBSI CCGCTC 1 cut(s) 1695
AccII CGCG 2 cut(s) 485, 993
AciI CCGC 5 cut(s) 68, 77, 690, 1402, 1695
AclWI GGATC 3 cut(s) 184, 367, 1827
AcoI YGGCCR 1 cut(s) 2136
AcsI RAATTY 7 cut(s) 751, 1244, 1333, 1390, 1458, 1642, 1907
AcuI CTGAAG 2 cut(s) 851, 1202
AfaI GTAC 3 cut(s) 863, 962, 1240
AfeI AGCGCT 1 cut(s) 1376
AfiI CCNNNNNNNGG 6 cut(s) 162, 173, 520, 706, 1322, 1669
AflIII ACRYGT 1 cut(s) 148
AhlI ACTAGT 1 cut(s) 1123
AjnI CCWGG 7 cut(s) 166, 736, 1149, 1419, 1567, 1662, 1945
AjuI GAANNNNNNNTTGG 6 cut(s) 99, 131, 1024, 1056, 1799, 1831
AloI GAACNNNNNNTCC 2 cut(s) 46, 78
AluBI AGCT 5 cut(s) 672, 1060, 1857, 2078, 2270
AluI AGCT 5 cut(s) 672, 1060, 1857, 2078, 2270
Alw21I GWGCWC 1 cut(s) 2132
Alw26I GTCTC 5 cut(s) 584, 833, 1140, 1440, 2216
AlwI GGATC 3 cut(s) 184, 367, 1827
Aor51HI AGCGCT 1 cut(s) 1376
AoxI GGCC 7 cut(s) 164, 678, 691, 1261, 1671, 1833, 2136
ApeKI GCWGC 6 cut(s) 458, 563, 651, 1595, 2177, 2180
ApoI RAATTY 7 cut(s) 751, 1244, 1333, 1390, 1458, 1642, 1907
ArsI GACNNNNNNTTYG 2 cut(s) 895, 927
Asp700I GAANNNNTTC 1 cut(s) 2097
AspLEI GCGC 1 cut(s) 1377
AspS9I GGNCC 2 cut(s) 678, 740
AsuC2I CCSGG 1 cut(s) 677
AsuHPI GGTGA 1 cut(s) 1557
AvaII GGWCC 1 cut(s) 740
Bbv12I GWGCWC 1 cut(s) 2132
BbvI GCAGC 6 cut(s) 445, 575, 638, 1607, 2189, 2192
BccI CCATC 8 cut(s) 142, 275, 850, 929, 1323, 1540, 1766, 2178
BceAI ACGGC 2 cut(s) 1248, 2151
BcgI CGANNNNNNTGC 2 cut(s) 475, 509
BciT130I CCWGG 7 cut(s) 168, 738, 1151, 1421, 1569, 1664, 1947
BcnI CCSGG 1 cut(s) 677
BcoDI GTCTC 5 cut(s) 584, 833, 1140, 1440, 2216
BcuI ACTAGT 1 cut(s) 1123
BfaI CTAG 5 cut(s) 345, 380, 1124, 1370, 2174
BfmI CTRYAG 2 cut(s) 652, 2145
BfoI RGCGCY 1 cut(s) 1378
BfuAI ACCTGC 2 cut(s) 436, 1243
BisI GCNGC 8 cut(s) 459, 564, 652, 691, 1596, 1696, 2178, 2181
BlsI GCNGC 8 cut(s) 460, 565, 653, 692, 1597, 1697, 2179, 2182
BmcAI AGTACT 1 cut(s) 962
Bme1390I CCNGG 8 cut(s) 168, 677, 738, 1151, 1421, 1569, 1664, 1947
Bme18I GGWCC 1 cut(s) 740
BmgT120I GGNCC 2 cut(s) 678, 740
BmiI GGNNCC 2 cut(s) 50, 286
BmrFI CCNGG 8 cut(s) 168, 677, 738, 1151, 1421, 1569, 1664, 1947
BmsI GCATC 4 cut(s) 807, 1023, 1165, 1200
BplI GAGNNNNNCTC 2 cut(s) 40, 72
BpmI CTGGAG 2 cut(s) 384, 2286
BpuEI CTTGAG 1 cut(s) 1076
BpuMI CCSGG 1 cut(s) 677
Bsa29I ATCGAT 1 cut(s) 1232
BsaI GGTCTC 1 cut(s) 833
BsaJI CCNNGG 9 cut(s) 614, 1092, 1149, 1280, 1316, 1512, 1946, 2236, 2291
BsaWI WCCGGW 1 cut(s) 2155
BsaXI ACNNNNNCTCC 6 cut(s) 46, 76, 627, 657, 1145, 1175
Bsc4I CCNNNNNNNGG 6 cut(s) 162, 173, 520, 706, 1322, 1669
Bse1I ACTGG 2 cut(s) 877, 2276
BseBI CCWGG 7 cut(s) 168, 738, 1151, 1421, 1569, 1664, 1947
BseCI ATCGAT 1 cut(s) 1232
BseDI CCNNGG 9 cut(s) 614, 1092, 1149, 1280, 1316, 1512, 1946, 2236, 2291
BseGI GGATG 9 cut(s) 139, 715, 822, 940, 1551, 1555, 1777, 1975, 2022
BseLI CCNNNNNNNGG 6 cut(s) 162, 173, 520, 706, 1322, 1669
BseMII CTCAG 1 cut(s) 2088
BseNI ACTGG 2 cut(s) 877, 2276
BseRI GAGGAG 3 cut(s) 54, 651, 1305
BseXI GCAGC 6 cut(s) 445, 575, 638, 1607, 2189, 2192
BseYI CCCAGC 3 cut(s) 969, 1377, 2012
BsgI GTGCAG 2 cut(s) 464, 2300
Bsh1236I CGCG 2 cut(s) 485, 993
BshFI GGCC 7 cut(s) 166, 680, 693, 1263, 1673, 1835, 2138
BshVI ATCGAT 1 cut(s) 1232
BsiHKAI GWGCWC 1 cut(s) 2132
BsiSI CCGG 2 cut(s) 676, 2156
BslFI GGGAC 3 cut(s) 74, 1510, 1963
BslI CCNNNNNNNGG 6 cut(s) 162, 173, 520, 706, 1322, 1669
BsmAI GTCTC 5 cut(s) 584, 833, 1140, 1440, 2216
BsmFI GGGAC 3 cut(s) 74, 1510, 1963
BsmI GAATGC 3 cut(s) 493, 565, 1495
BsnI GGCC 7 cut(s) 166, 680, 693, 1263, 1673, 1835, 2138
Bso31I GGTCTC 1 cut(s) 833
Bsp1286I GDGCHC 1 cut(s) 2132
Bsp143I GATC 4 cut(s) 176, 359, 945, 1819
Bsp68I TCGCGA 1 cut(s) 485
BspACI CCGC 5 cut(s) 68, 77, 690, 1402, 1695
BspANI GGCC 7 cut(s) 166, 680, 693, 1263, 1673, 1835, 2138
BspCNI CTCAG 1 cut(s) 2087
BspDI ATCGAT 1 cut(s) 1232
BspFNI CGCG 2 cut(s) 485, 993
BspLI GGNNCC 2 cut(s) 50, 286
BspMAI CTGCAG 1 cut(s) 656
BspMI ACCTGC 2 cut(s) 436, 1243
BspPI GGATC 3 cut(s) 184, 367, 1827
BspTNI GGTCTC 1 cut(s) 833
BsrBI CCGCTC 1 cut(s) 1695
BsrI ACTGG 2 cut(s) 877, 2276
BssECI CCNNGG 9 cut(s) 614, 1092, 1149, 1280, 1316, 1512, 1946, 2236, 2291
BssMI GATC 4 cut(s) 176, 359, 945, 1819
BssT1I CCWWGG 6 cut(s) 614, 1092, 1280, 1512, 2236, 2291
Bst2UI CCWGG 7 cut(s) 168, 738, 1151, 1421, 1569, 1664, 1947
Bst4CI ACNGT 4 cut(s) 16, 952, 1791, 2260
Bst6I CTCTTC 6 cut(s) 155, 378, 398, 936, 1178, 1225
BstC8I GCNNGC 3 cut(s) 477, 1402, 1837
BstDEI CTNAG 2 cut(s) 810, 2074
BstF5I GGATG 9 cut(s) 139, 715, 822, 940, 1551, 1555, 1777, 1975, 2022
BstFNI CGCG 2 cut(s) 485, 993
BstH2I RGCGCY 1 cut(s) 1378
BstHHI GCGC 1 cut(s) 1377
BstKTI GATC 4 cut(s) 179, 362, 948, 1822
BstMAI GTCTC 5 cut(s) 584, 833, 1140, 1440, 2216
BstMBI GATC 4 cut(s) 176, 359, 945, 1819
BstMWI GCNNNNNNNGC 3 cut(s) 76, 1604, 2174
BstNI CCWGG 7 cut(s) 168, 738, 1151, 1421, 1569, 1664, 1947
BstNSI RCATGY 1 cut(s) 985
BstSCI CCNGG 8 cut(s) 166, 675, 736, 1149, 1419, 1567, 1662, 1945
BstSFI CTRYAG 2 cut(s) 652, 2145
BstUI CGCG 2 cut(s) 485, 993
BstV1I GCAGC 6 cut(s) 445, 575, 638, 1607, 2189, 2192
BstX2I RGATCY 2 cut(s) 176, 359
BstYI RGATCY 2 cut(s) 176, 359
Bsu15I ATCGAT 1 cut(s) 1232
BsuRI GGCC 7 cut(s) 166, 680, 693, 1263, 1673, 1835, 2138
BsuTUI ATCGAT 1 cut(s) 1232
BtsCI GGATG 9 cut(s) 139, 715, 822, 940, 1551, 1555, 1777, 1975, 2022
BtsIMutI CAGTG 4 cut(s) 870, 948, 1178, 2283
BtuMI TCGCGA 1 cut(s) 485
BveI ACCTGC 2 cut(s) 436, 1243
Cac8I GCNNGC 3 cut(s) 477, 1402, 1837
CfoI GCGC 1 cut(s) 1377
Cfr13I GGNCC 2 cut(s) 678, 740
ClaI ATCGAT 1 cut(s) 1232
CsiI ACCWGGT 1 cut(s) 736
Csp6I GTAC 3 cut(s) 862, 961, 1239
CviQI GTAC 3 cut(s) 862, 961, 1239
DdeI CTNAG 2 cut(s) 810, 2074
DpnI GATC 4 cut(s) 178, 361, 947, 1821
DpnII GATC 4 cut(s) 176, 359, 945, 1819
DrdI GACNNNNNNGTC 1 cut(s) 1967
DseDI GACNNNNNNGTC 1 cut(s) 1967
EaeI YGGCCR 1 cut(s) 2136
Eam1104I CTCTTC 6 cut(s) 155, 378, 398, 936, 1178, 1225
EarI CTCTTC 6 cut(s) 155, 378, 398, 936, 1178, 1225
EciI GGCGGA 2 cut(s) 57, 66
Eco130I CCWWGG 6 cut(s) 614, 1092, 1280, 1512, 2236, 2291
Eco147I AGGCCT 2 cut(s) 166, 1835
Eco31I GGTCTC 1 cut(s) 833
Eco47I GGWCC 1 cut(s) 740
Eco47III AGCGCT 1 cut(s) 1376
Eco57I CTGAAG 2 cut(s) 851, 1202
EcoRI GAATTC 1 cut(s) 1458
EcoRII CCWGG 7 cut(s) 166, 736, 1149, 1419, 1567, 1662, 1945
EcoT14I CCWWGG 6 cut(s) 614, 1092, 1280, 1512, 2236, 2291
ErhI CCWWGG 6 cut(s) 614, 1092, 1280, 1512, 2236, 2291
FalI AAGNNNNNCTT 2 cut(s) 1446, 1478
FaqI GGGAC 3 cut(s) 74, 1510, 1963
FauI CCCGC 1 cut(s) 1409
FauNDI CATATG 1 cut(s) 2113
Fnu4HI GCNGC 8 cut(s) 459, 564, 652, 691, 1596, 1696, 2178, 2181
FokI GGATG 9 cut(s) 126, 722, 829, 947, 1558, 1562, 1784, 1962, 2029
Fsp4HI GCNGC 8 cut(s) 459, 564, 652, 691, 1596, 1696, 2178, 2181
FspBI CTAG 5 cut(s) 345, 380, 1124, 1370, 2174
GlaI GCGC 1 cut(s) 1376
GluI GCNGC 8 cut(s) 459, 564, 652, 691, 1596, 1696, 2178, 2181
GsaI CCCAGC 3 cut(s) 973, 1381, 2016
GsuI CTGGAG 2 cut(s) 384, 2286
HaeII RGCGCY 1 cut(s) 1378
HaeIII GGCC 7 cut(s) 166, 680, 693, 1263, 1673, 1835, 2138
HapII CCGG 2 cut(s) 676, 2156
HhaI GCGC 1 cut(s) 1377
Hin6I GCGC 1 cut(s) 1375
HinP1I GCGC 1 cut(s) 1375
HincII GTYRAC 5 cut(s) 295, 451, 1164, 1426, 2314
HindII GTYRAC 5 cut(s) 295, 451, 1164, 1426, 2314
HindIII AAGCTT 1 cut(s) 670
HinfI GANTC 8 cut(s) 388, 408, 506, 995, 1470, 1784, 1894, 2191
HpaII CCGG 2 cut(s) 676, 2156
HphI GGTGA 1 cut(s) 1557
Hpy166II GTNNAC 7 cut(s) 295, 451, 717, 1164, 1426, 2119, 2314
Hpy188I TCNGA 8 cut(s) 511, 831, 1320, 1536, 1579, 1705, 1824, 2221
Hpy8I GTNNAC 7 cut(s) 295, 451, 717, 1164, 1426, 2119, 2314
HpyAV CCTTC 6 cut(s) 39, 826, 1050, 1253, 1512, 1596
HpyCH4III ACNGT 4 cut(s) 16, 952, 1791, 2260
HpyCH4IV ACGT 6 cut(s) 9, 148, 313, 905, 1410, 1573
HpyF10VI GCNNNNNNNGC 3 cut(s) 76, 1604, 2174
HpyF3I CTNAG 2 cut(s) 810, 2074
HpySE526I ACGT 6 cut(s) 9, 148, 313, 905, 1410, 1573
HspAI GCGC 1 cut(s) 1375
Kzo9I GATC 4 cut(s) 176, 359, 945, 1819
LmnI GCTCC 6 cut(s) 48, 1153, 1492, 2127, 2158, 2267
Lsp1109I GCAGC 6 cut(s) 445, 575, 638, 1607, 2189, 2192
LweI GCATC 4 cut(s) 807, 1023, 1165, 1200
MabI ACCWGGT 1 cut(s) 736
MaeI CTAG 5 cut(s) 345, 380, 1124, 1370, 2174
MaeII ACGT 6 cut(s) 9, 148, 313, 905, 1410, 1573
MalI GATC 4 cut(s) 178, 361, 947, 1821
MbiI CCGCTC 1 cut(s) 1695
MboI GATC 4 cut(s) 176, 359, 945, 1819
MfeI CAATTG 1 cut(s) 93
MflI RGATCY 2 cut(s) 176, 359
MhlI GDGCHC 1 cut(s) 2132
MlyI GAGTC 5 cut(s) 397, 417, 500, 1793, 2200
MmeI TCCRAC 1 cut(s) 1003
MroXI GAANNNNTTC 1 cut(s) 2097
MseI TTAA 3 cut(s) 126, 1632, 2202
MslI CAYNNNNRTG 3 cut(s) 722, 2046, 2304
MspA1I CMGCKG 2 cut(s) 1404, 2078
MspI CCGG 2 cut(s) 676, 2156
MspR9I CCNGG 8 cut(s) 168, 677, 738, 1151, 1421, 1569, 1664, 1947
MunI CAATTG 1 cut(s) 93
Mva1269I GAATGC 3 cut(s) 493, 565, 1495
MvaI CCWGG 7 cut(s) 168, 738, 1151, 1421, 1569, 1664, 1947
MvnI CGCG 2 cut(s) 485, 993
MwoI GCNNNNNNNGC 3 cut(s) 76, 1604, 2174
NciI CCSGG 1 cut(s) 677
NdeI CATATG 1 cut(s) 2113
NdeII GATC 4 cut(s) 176, 359, 945, 1819
NlaIV GGNNCC 2 cut(s) 50, 286
NmeAIII GCCGAG 1 cut(s) 1117
NmuCI GTSAC 4 cut(s) 10, 1406, 1554, 1785
NruI TCGCGA 1 cut(s) 485
NspI RCATGY 1 cut(s) 985
PceI AGGCCT 2 cut(s) 166, 1835
PctI GAATGC 3 cut(s) 493, 565, 1495
PdmI GAANNNNTTC 1 cut(s) 2097
PfeI GAWTC 3 cut(s) 995, 1470, 1894
PflMI CCANNNNNTGG 1 cut(s) 1669
PfoI TCCNGGA 1 cut(s) 1662
PkrI GCNGC 8 cut(s) 460, 565, 653, 692, 1597, 1697, 2179, 2182
PleI GAGTC 5 cut(s) 396, 416, 500, 1792, 2199
PpsI GAGTC 5 cut(s) 396, 416, 500, 1792, 2199
PsiI TTATAA 1 cut(s) 551
Psp6I CCWGG 7 cut(s) 166, 736, 1149, 1419, 1567, 1662, 1945
PspFI CCCAGC 3 cut(s) 969, 1377, 2012
PspGI CCWGG 7 cut(s) 166, 736, 1149, 1419, 1567, 1662, 1945
PspN4I GGNNCC 2 cut(s) 50, 286
PspPI GGNCC 2 cut(s) 678, 740
PstI CTGCAG 1 cut(s) 656
PsuI RGATCY 2 cut(s) 176, 359
PvuII CAGCTG 1 cut(s) 2078
RruI TCGCGA 1 cut(s) 485
RsaI GTAC 3 cut(s) 863, 962, 1240
RsaNI GTAC 3 cut(s) 862, 961, 1239
RseI CAYNNNNRTG 3 cut(s) 722, 2046, 2304
SaqAI TTAA 3 cut(s) 126, 1632, 2202
SatI GCNGC 8 cut(s) 459, 564, 652, 691, 1596, 1696, 2178, 2181
Sau3AI GATC 4 cut(s) 176, 359, 945, 1819
Sau96I GGNCC 2 cut(s) 678, 740
ScaI AGTACT 1 cut(s) 962
SchI GAGTC 5 cut(s) 397, 417, 500, 1793, 2200
ScrFI CCNGG 8 cut(s) 168, 677, 738, 1151, 1421, 1569, 1664, 1947
SduI GDGCHC 1 cut(s) 2132
SexAI ACCWGGT 1 cut(s) 736
SfaNI GCATC 4 cut(s) 807, 1023, 1165, 1200
SfcI CTRYAG 2 cut(s) 652, 2145
SinI GGWCC 1 cut(s) 740
SmiMI CAYNNNNRTG 3 cut(s) 722, 2046, 2304
SmlI CTYRAG 1 cut(s) 1055
SmoI CTYRAG 1 cut(s) 1055
SpeI ACTAGT 1 cut(s) 1123
SseBI AGGCCT 2 cut(s) 166, 1835
SsiI CCGC 5 cut(s) 68, 77, 690, 1402, 1695
SspMI CTAG 5 cut(s) 345, 380, 1124, 1370, 2174
StuI AGGCCT 2 cut(s) 166, 1835
StyD4I CCNGG 8 cut(s) 166, 675, 736, 1149, 1419, 1567, 1662, 1945
StyI CCWWGG 6 cut(s) 614, 1092, 1280, 1512, 2236, 2291
TaaI ACNGT 4 cut(s) 16, 952, 1791, 2260
TaiI ACGT 6 cut(s) 12, 151, 316, 908, 1413, 1576
TaqI TCGA 2 cut(s) 1232, 2208
TatI WGTACW 2 cut(s) 861, 960
TauI GCSGC 2 cut(s) 693, 1698
TfiI GAWTC 3 cut(s) 995, 1470, 1894
Tru1I TTAA 3 cut(s) 126, 1632, 2202
Tru9I TTAA 3 cut(s) 126, 1632, 2202
TscAI CASTG 4 cut(s) 877, 955, 1185, 2283
TseFI GTSAC 4 cut(s) 10, 1406, 1554, 1785
TseI GCWGC 6 cut(s) 458, 563, 651, 1595, 2177, 2180
Tsp45I GTSAC 4 cut(s) 10, 1406, 1554, 1785
TspDTI ATGAA 7 cut(s) 173, 613, 1466, 1861, 2076, 2090, 2226
TspRI CASTG 4 cut(s) 877, 955, 1185, 2283
Van91I CCANNNNNTGG 1 cut(s) 1669
VpaK11BI GGWCC 1 cut(s) 740
XapI RAATTY 7 cut(s) 751, 1244, 1333, 1390, 1458, 1642, 1907
XceI RCATGY 1 cut(s) 985
XcmI CCANNNNNNNNNTGG 1 cut(s) 2243
XmnI GAANNNNTTC 1 cut(s) 2097
XspI CTAG 5 cut(s) 345, 380, 1124, 1370, 2174
ZrmI AGTACT 1 cut(s) 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.