RLG00000029812

Argonaute

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0001623
Physical Location & Seq
Reverse (-)
49563967 .. 49569250
5284 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029812

Sequence Viewer

Length: 2418 bp
ATGGGTTCTTCAAATCCCGAAGGAGACGAACTCCCCCCTCCTCCGCCCATTCCGCCAAATGTTGTCCCAATTGTCGCAGGAGAAAAACCTCTTGAACTAATTAACAAACCATCTCCTCCAAAACGTGTTCCCATGAAGAGGCCTGGCATTGGATCTAAAGGTCAAAGGATTTCACTTCTTACCAACCATTTCAAAGTGGGATTGAACAAATCTAATGCTGACTTTTACCATTATAGTATTGCCATGCAATATGATGATGGAACCGAAGTTGACGGGAAAGGCATTGGACGTAAGGTTCTTGACAAAGTAAAAGACACATATAGTGTGGAGCTGGAAAACAAGGATTTTGCTTATGATGGAGAGAAGAGCTTGTTTACTGTTGGGCAGCTCCCTCATAAAAAACTTGATTTCACGGTTGTACTGGATGACATATCATCAAGCAGGACGAATGGGGGATCTGGAGGCAATTACTCCCTAGAAGAGAGTCAGGGCGATAGGAAGAGAGTCAAGCAGTCATTTCAATCCAAAACAATAAAGGTGCAGGTCAACTTTGCTGCTAAAATCCCAATGCAAGCAATCGGGAATGCCTTGCGAGGTCAGGACTCTGACCATTTTCAGGAAGCAGTTAGAGTTCTTGACATCATTATAAGGCAGAATGCAGCAAAGCAGGGTTGTCTCCTTGTTCGGCAGTCTTTCTTCCATAACAACCCGAGGAACTTCATTGAATTGGGAGGAGGGGTGTTAGGCTGCAGGGGTTTCCATTCAAGCTTCCGGGCCACGCAAGGCGGCCTATCCCTGAATATGGATGTGTCCACTACAATGATTGTAAAACCTGGTCCTGTTTTGAATTTCCTCATGGAGAACCAGAATGTCAAAACTCCTTACCAGATTGATTGGAATAAGGCTAAGAGGATGCTGAAAAATCTGAAGGTTGAGACCTATGCTTCCAAGATGGAGTACAAAATCACTGGATTGAGTGATAAACCCTGCAAACAGCAGACGTTCTTTTTGAAATCAAAAGGAGGACAGGATGGAGAAGAGATCACTGTTTATGAGTACTTTGCCCAGCATAAGCACATGCAGTTACACGATTCAGCAGATTTTCCCTGCATCAATGTTGGAAAACCAAAGAAACCTTCTTACTTTCCTCTTGAGCTTTGTAATTTGATTTCCTTGCAACGCTATACCAAGGCTTTATCCAATCTCCAGAGGGCTTCACTAGTGGAGAAGTCTCGGCAAAAACCCCAGGAGCGAATGTCAACTTTGCGTGATGCACTGAAGAGTAGTAAATATGAGGCTGACATGATGCTTCACTCTTCTGGAATATCGATTGGTACACAATTTATGCAGGTTGAAGGCCGTGTTTTGTCAGCCCCAAGGTTGAAAGTGGGAAATGGAGAGGATTTTTCTCCTCGGAATGGGAGATGGAATTTCAACAATAAGAAATTAGTAGAACCTGTAAAACTAGAGCACTGGGCTGTTGTAAATTTCTCTGCTCGCTGTGACGTTCGCTTCCTGGTCAACACTATGATAAAGTGTGGAGACATGAAAGGAATTTCCATCAACCATCCGTTTGTGTTTGAAGAGAGCATTCAGAATAGACGTGAGTCAGCTCTGAGTCCATGGAAAAGGAAAAACCTTTCAGACGTTGGGATTGTAACACAGTGTATTGCACCAACTAAAGTAAATGATCAATACATCACAAATGTGCTCCTGAAAATTAATGCAAAGCTTGGTGGAATCAACTCCTTGCTAATGGTGGAGCATTCTCCTTCTCTTCCCTTGGTTTCCAAGTCCCCCACTCTGATTTTAGGGATGGATGTGTCACATGGCTCACCTGGACGTTCCGATGTGCCTTCTATTGCAGCGGTGGTCAGTTCCAGGAAATGGCCTTTGATTTCTCGTTACCGAGCTGCAGTTCGTACTCAATCACCAAAAGTAGAAATGATTGCTAATCTGTTCAAGCCTGTGTCTGATAAAGAGGACCAAGGCATAATCAAGGAACTTTTGTTAGACTTTTATACTACTTCAAACAACCGGAAGCCGGAACAGATAATTATTTTCAGGGATGGAGTGAGTGAATCACAGTTCAACCAAGTCTTGAATGTAGAATTGGATCAGATTATTGAGGCCTGCAAGTTTCTTGATGAGAGCTGGTGTCCAAAGTTCATGGTTATTATTGCACAAAAGAATCATCATACAAAATTTTTTCAGGCTGGTGGTTCTCCTGACAATGTTCCACCTGGGACTATTATTGACAACAAAGTCTGTCATCCAAAGAACAATGATTTCTACTTATGTTCTCATGCTGGGATGATTGGAACAACTCGTCCTACTCATTATCATGTTCTATATGATGAACTTGGCTTCTCAGCGGATGATTTGCAAGAACTTGTTCATTCTTTATCATATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

806

Amino Acids

90.09

Weight (kDa)

9.19

Isoelectric Point (pI)

36.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArgoN PF16486 55 - 216 1.3e-26 N-terminal domain of argonaute
ArgoL1 PF08699 228 - 277 2e-18 Argonaute linker 1 domain
PAZ PF02170 282 - 407 4.7e-28 PAZ domain
ArgoL2 PF16488 417 - 462 3.3e-09 Argonaute linker 2 domain
ArgoMid PF16487 470 - 522 3.6e-06 Mid domain of argonaute
Piwi PF02171 531 - 805 5.7e-91 Piwi domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 647
AasI GACNNNNNNGTC 1 cut(s) 2264
Acc36I ACCTGC 2 cut(s) 532, 1339
AccB7I CCANNNNNTGG 1 cut(s) 1887
AciI CCGC 5 cut(s) 44, 53, 786, 1868, 2375
AclWI GGATC 3 cut(s) 160, 463, 2124
AcsI RAATTY 5 cut(s) 847, 1429, 1486, 1554, 2204
AcuI CTGAAG 2 cut(s) 947, 1298
AfaI GTAC 5 cut(s) 420, 959, 1058, 1336, 1924
AfiI CCNNNNNNNGG 7 cut(s) 138, 149, 616, 802, 1418, 1887, 2044
AflIII ACRYGT 1 cut(s) 124
AhlI ACTAGT 1 cut(s) 1219
AjiI CACGTC 1 cut(s) 1604
AjnI CCWGG 7 cut(s) 142, 832, 1245, 1515, 1837, 1880, 2242
AjuI GAANNNNNNNTTGG 4 cut(s) 1120, 1152, 2096, 2128
AleI CACNNNNGTG 1 cut(s) 1706
AloI GAACNNNNNNTCC 4 cut(s) 279, 311, 2314, 2346
AluBI AGCT 9 cut(s) 331, 369, 388, 768, 1156, 1613, 1732, 1913, 2154
AluI AGCT 9 cut(s) 331, 369, 388, 768, 1156, 1613, 1732, 1913, 2154
Alw21I GWGCWC 2 cut(s) 1473, 1713
Alw26I GTCTC 5 cut(s) 18, 680, 929, 1236, 1536
AlwI GGATC 3 cut(s) 160, 463, 2124
Ama87I CYCGRG 1 cut(s) 709
AoxI GGCC 6 cut(s) 140, 774, 787, 1357, 1889, 2130
ApeKI GCWGC 6 cut(s) 385, 554, 659, 747, 1865, 1913
ApoI RAATTY 5 cut(s) 847, 1429, 1486, 1554, 2204
ArsI GACNNNNNNTTYG 2 cut(s) 991, 1023
AseI ATTAAT 1 cut(s) 1722
Asp700I GAANNNNTTC 1 cut(s) 2394
AspS9I GGNCC 3 cut(s) 774, 836, 1984
AsuC2I CCSGG 1 cut(s) 773
AsuHPI GGTGA 2 cut(s) 1827, 1923
AvaI CYCGRG 1 cut(s) 709
AvaII GGWCC 2 cut(s) 836, 1984
Bbv12I GWGCWC 2 cut(s) 1473, 1713
BbvI GCAGC 6 cut(s) 397, 541, 671, 734, 1877, 1900
BceAI ACGGC 1 cut(s) 1344
BciT130I CCWGG 7 cut(s) 144, 834, 1247, 1517, 1839, 1882, 2244
BclI TGATCA 1 cut(s) 1690
BcnI CCSGG 1 cut(s) 773
BcoDI GTCTC 5 cut(s) 18, 680, 929, 1236, 1536
BcuI ACTAGT 1 cut(s) 1219
BfaI CTAG 3 cut(s) 476, 1220, 1466
BfmI CTRYAG 2 cut(s) 748, 1914
BfuAI ACCTGC 2 cut(s) 532, 1339
BisI GCNGC 7 cut(s) 386, 555, 660, 748, 787, 1866, 1914
BlsI GCNGC 7 cut(s) 387, 556, 661, 749, 788, 1867, 1915
BmcAI AGTACT 1 cut(s) 1058
Bme1390I CCNGG 8 cut(s) 144, 773, 834, 1247, 1517, 1839, 1882, 2244
Bme18I GGWCC 2 cut(s) 836, 1984
BmeT110I CYCGRG 1 cut(s) 709
BmgBI CACGTC 1 cut(s) 1604
BmgT120I GGNCC 3 cut(s) 774, 836, 1984
BmiI GGNNCC 1 cut(s) 262
BmrFI CCNGG 8 cut(s) 144, 773, 834, 1247, 1517, 1839, 1882, 2244
BmrI ACTGGG 1 cut(s) 1483
BmsI GCATC 4 cut(s) 903, 1119, 1261, 1296
BmuI ACTGGG 1 cut(s) 1483
BoxI GACNNNNGTC 1 cut(s) 1606
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BpmI CTGGAG 2 cut(s) 480, 1190
BpuEI CTTGAG 1 cut(s) 1172
BpuMI CCSGG 1 cut(s) 773
Bsa29I ATCGAT 1 cut(s) 1328
BsaI GGTCTC 1 cut(s) 929
BsaJI CCNNGG 9 cut(s) 710, 1188, 1245, 1376, 1412, 1622, 1782, 1987, 2243
BsaWI WCCGGW 1 cut(s) 2037
BsaXI ACNNNNNCTCC 4 cut(s) 723, 753, 1241, 1271
Bsc4I CCNNNNNNNGG 7 cut(s) 138, 149, 616, 802, 1418, 1887, 2044
Bse1I ACTGG 3 cut(s) 426, 973, 1478
BseBI CCWGG 7 cut(s) 144, 834, 1247, 1517, 1839, 1882, 2244
BseCI ATCGAT 1 cut(s) 1328
BseDI CCNNGG 9 cut(s) 710, 1188, 1245, 1376, 1412, 1622, 1782, 1987, 2243
BseLI CCNNNNNNNGG 7 cut(s) 138, 149, 616, 802, 1418, 1887, 2044
BseMII CTCAG 2 cut(s) 1607, 2385
BseNI ACTGG 3 cut(s) 426, 973, 1478
BseRI GAGGAG 4 cut(s) 30, 105, 747, 1401
BseXI GCAGC 6 cut(s) 397, 541, 671, 734, 1877, 1900
BseYI CCCAGC 2 cut(s) 1065, 2309
BsgI GTGCAG 1 cut(s) 560
BshFI GGCC 6 cut(s) 142, 776, 789, 1359, 1891, 2132
BshVI ATCGAT 1 cut(s) 1328
BsiHKAI GWGCWC 2 cut(s) 1473, 1713
BsiHKCI CYCGRG 1 cut(s) 709
BsiSI CCGG 3 cut(s) 772, 2038, 2045
BslFI GGGAC 3 cut(s) 50, 1780, 2260
BslI CCNNNNNNNGG 7 cut(s) 138, 149, 616, 802, 1418, 1887, 2044
BsmAI GTCTC 5 cut(s) 18, 680, 929, 1236, 1536
BsmBI CGTCTC 1 cut(s) 18
BsmFI GGGAC 3 cut(s) 50, 1780, 2260
BsmI GAATGC 4 cut(s) 589, 661, 1590, 1765
BsnI GGCC 6 cut(s) 142, 776, 789, 1359, 1891, 2132
Bso31I GGTCTC 1 cut(s) 929
BsoBI CYCGRG 1 cut(s) 709
Bsp1286I GDGCHC 2 cut(s) 1473, 1713
Bsp143I GATC 5 cut(s) 152, 455, 1041, 1690, 2116
Bsp19I CCATGG 1 cut(s) 1622
BspACI CCGC 5 cut(s) 44, 53, 786, 1868, 2375
BspANI GGCC 6 cut(s) 142, 776, 789, 1359, 1891, 2132
BspCNI CTCAG 2 cut(s) 1608, 2384
BspDI ATCGAT 1 cut(s) 1328
BspLI GGNNCC 1 cut(s) 262
BspMAI CTGCAG 2 cut(s) 752, 1918
BspMI ACCTGC 2 cut(s) 532, 1339
BspPI GGATC 3 cut(s) 160, 463, 2124
BspQI GCTCTTC 1 cut(s) 359
BspTNI GGTCTC 1 cut(s) 929
BsrI ACTGG 3 cut(s) 426, 973, 1478
BssECI CCNNGG 9 cut(s) 710, 1188, 1245, 1376, 1412, 1622, 1782, 1987, 2243
BssMI GATC 5 cut(s) 152, 455, 1041, 1690, 2116
BssT1I CCWWGG 5 cut(s) 1188, 1376, 1622, 1782, 1987
Bst2UI CCWGG 7 cut(s) 144, 834, 1247, 1517, 1839, 1882, 2244
Bst4CI ACNGT 5 cut(s) 379, 415, 1048, 1665, 2088
Bst6I CTCTTC 9 cut(s) 131, 359, 474, 494, 1032, 1274, 1321, 1578, 1782
BstC8I GCNNGC 3 cut(s) 573, 1498, 2134
BstDEI CTNAG 3 cut(s) 906, 1616, 2371
BstDSI CCRYGG 1 cut(s) 1622
BstKTI GATC 5 cut(s) 155, 458, 1044, 1693, 2119
BstMAI GTCTC 5 cut(s) 18, 680, 929, 1236, 1536
BstMBI GATC 5 cut(s) 152, 455, 1041, 1690, 2116
BstMWI GCNNNNNNNGC 1 cut(s) 52
BstNI CCWGG 7 cut(s) 144, 834, 1247, 1517, 1839, 1882, 2244
BstNSI RCATGY 1 cut(s) 1081
BstPAI GACNNNNGTC 1 cut(s) 1606
BstSCI CCNGG 8 cut(s) 142, 771, 832, 1245, 1515, 1837, 1880, 2242
BstSFI CTRYAG 2 cut(s) 748, 1914
BstV1I GCAGC 6 cut(s) 397, 541, 671, 734, 1877, 1900
BstX2I RGATCY 2 cut(s) 152, 455
BstYI RGATCY 2 cut(s) 152, 455
Bsu15I ATCGAT 1 cut(s) 1328
BsuRI GGCC 6 cut(s) 142, 776, 789, 1359, 1891, 2132
BsuTUI ATCGAT 1 cut(s) 1328
BtgI CCRYGG 1 cut(s) 1622
BtrI CACGTC 1 cut(s) 1604
BtsIMutI CAGTG 5 cut(s) 966, 1044, 1274, 1471, 1670
BveI ACCTGC 2 cut(s) 532, 1339
Cac8I GCNNGC 3 cut(s) 573, 1498, 2134
Cfr13I GGNCC 3 cut(s) 774, 836, 1984
ClaI ATCGAT 1 cut(s) 1328
CsiI ACCWGGT 1 cut(s) 832
Csp6I GTAC 5 cut(s) 419, 958, 1057, 1335, 1923
CviQI GTAC 5 cut(s) 419, 958, 1057, 1335, 1923
DdeI CTNAG 3 cut(s) 906, 1616, 2371
DpnI GATC 5 cut(s) 154, 457, 1043, 1692, 2118
DpnII GATC 5 cut(s) 152, 455, 1041, 1690, 2116
DrdI GACNNNNNNGTC 1 cut(s) 2264
DseDI GACNNNNNNGTC 1 cut(s) 2264
Eam1104I CTCTTC 9 cut(s) 131, 359, 474, 494, 1032, 1274, 1321, 1578, 1782
EarI CTCTTC 9 cut(s) 131, 359, 474, 494, 1032, 1274, 1321, 1578, 1782
EciI GGCGGA 2 cut(s) 33, 42
Eco130I CCWWGG 5 cut(s) 1188, 1376, 1622, 1782, 1987
Eco147I AGGCCT 2 cut(s) 142, 2132
Eco31I GGTCTC 1 cut(s) 929
Eco47I GGWCC 2 cut(s) 836, 1984
Eco57I CTGAAG 2 cut(s) 947, 1298
Eco88I CYCGRG 1 cut(s) 709
EcoRII CCWGG 7 cut(s) 142, 832, 1245, 1515, 1837, 1880, 2242
EcoT14I CCWWGG 5 cut(s) 1188, 1376, 1622, 1782, 1987
ErhI CCWWGG 5 cut(s) 1188, 1376, 1622, 1782, 1987
Esp3I CGTCTC 1 cut(s) 18
FaqI GGGAC 3 cut(s) 50, 1780, 2260
FauNDI CATATG 1 cut(s) 2410
FbaI TGATCA 1 cut(s) 1690
Fnu4HI GCNGC 7 cut(s) 386, 555, 660, 748, 787, 1866, 1914
Fsp4HI GCNGC 7 cut(s) 386, 555, 660, 748, 787, 1866, 1914
FspBI CTAG 3 cut(s) 476, 1220, 1466
GluI GCNGC 7 cut(s) 386, 555, 660, 748, 787, 1866, 1914
GsaI CCCAGC 2 cut(s) 1069, 2313
GsuI CTGGAG 2 cut(s) 480, 1190
HaeIII GGCC 6 cut(s) 142, 776, 789, 1359, 1891, 2132
HapII CCGG 3 cut(s) 772, 2038, 2045
HincII GTYRAC 4 cut(s) 271, 547, 1260, 1522
HindII GTYRAC 4 cut(s) 271, 547, 1260, 1522
HindIII AAGCTT 2 cut(s) 766, 1730
HinfI GANTC 9 cut(s) 484, 504, 602, 1091, 1607, 1618, 1740, 2081, 2191
HpaII CCGG 3 cut(s) 772, 2038, 2045
HphI GGTGA 2 cut(s) 1827, 1923
Hpy166II GTNNAC 7 cut(s) 271, 375, 547, 813, 1260, 1337, 1522
Hpy8I GTNNAC 7 cut(s) 271, 375, 547, 813, 1260, 1337, 1522
HpyAV CCTTC 6 cut(s) 14, 922, 1146, 1349, 1782, 1866
HpyCH4III ACNGT 5 cut(s) 379, 415, 1048, 1665, 2088
HpyCH4IV ACGT 7 cut(s) 124, 289, 1001, 1506, 1603, 1647, 1843
HpyF10VI GCNNNNNNNGC 1 cut(s) 52
HpyF3I CTNAG 3 cut(s) 906, 1616, 2371
HpySE526I ACGT 7 cut(s) 124, 289, 1001, 1506, 1603, 1647, 1843
Ksp22I TGATCA 1 cut(s) 1690
Kzo9I GATC 5 cut(s) 152, 455, 1041, 1690, 2116
LguI GCTCTTC 1 cut(s) 359
LmnI GCTCC 5 cut(s) 328, 393, 1249, 1716, 1762
Lsp1109I GCAGC 6 cut(s) 397, 541, 671, 734, 1877, 1900
LweI GCATC 4 cut(s) 903, 1119, 1261, 1296
MabI ACCWGGT 1 cut(s) 832
MaeI CTAG 3 cut(s) 476, 1220, 1466
MaeII ACGT 7 cut(s) 124, 289, 1001, 1506, 1603, 1647, 1843
MaeIII GTNAC 5 cut(s) 1083, 1502, 1657, 1824, 1904
MalI GATC 5 cut(s) 154, 457, 1043, 1692, 2118
MboI GATC 5 cut(s) 152, 455, 1041, 1690, 2116
MfeI CAATTG 1 cut(s) 69
MflI RGATCY 2 cut(s) 152, 455
MhlI GDGCHC 2 cut(s) 1473, 1713
MlyI GAGTC 5 cut(s) 493, 513, 596, 1616, 1627
MmeI TCCRAC 1 cut(s) 1099
MroXI GAANNNNTTC 1 cut(s) 2394
MseI TTAA 2 cut(s) 102, 1722
MslI CAYNNNNRTG 3 cut(s) 818, 1706, 2343
MspA1I CMGCKG 2 cut(s) 1868, 2375
MspI CCGG 3 cut(s) 772, 2038, 2045
MspR9I CCNGG 8 cut(s) 144, 773, 834, 1247, 1517, 1839, 1882, 2244
MunI CAATTG 1 cut(s) 69
Mva1269I GAATGC 4 cut(s) 589, 661, 1590, 1765
MvaI CCWGG 7 cut(s) 144, 834, 1247, 1517, 1839, 1882, 2244
MwoI GCNNNNNNNGC 1 cut(s) 52
NciI CCSGG 1 cut(s) 773
NcoI CCATGG 1 cut(s) 1622
NdeI CATATG 1 cut(s) 2410
NdeII GATC 5 cut(s) 152, 455, 1041, 1690, 2116
NlaIV GGNNCC 1 cut(s) 262
NmeAIII GCCGAG 1 cut(s) 1213
NmuCI GTSAC 2 cut(s) 1502, 1824
NspI RCATGY 1 cut(s) 1081
OliI CACNNNNGTG 1 cut(s) 1706
PceI AGGCCT 2 cut(s) 142, 2132
PciSI GCTCTTC 1 cut(s) 359
PctI GAATGC 4 cut(s) 589, 661, 1590, 1765
PdmI GAANNNNTTC 1 cut(s) 2394
PfeI GAWTC 4 cut(s) 1091, 1740, 2081, 2191
PflMI CCANNNNNTGG 1 cut(s) 1887
PfoI TCCNGGA 1 cut(s) 1880
PkrI GCNGC 7 cut(s) 387, 556, 661, 749, 788, 1867, 1915
PleI GAGTC 5 cut(s) 492, 512, 596, 1615, 1626
PpsI GAGTC 5 cut(s) 492, 512, 596, 1615, 1626
PshAI GACNNNNGTC 1 cut(s) 1606
PshBI ATTAAT 1 cut(s) 1722
PsiI TTATAA 1 cut(s) 647
Psp6I CCWGG 7 cut(s) 142, 832, 1245, 1515, 1837, 1880, 2242
PspFI CCCAGC 2 cut(s) 1065, 2309
PspGI CCWGG 7 cut(s) 142, 832, 1245, 1515, 1837, 1880, 2242
PspN4I GGNNCC 1 cut(s) 262
PspPI GGNCC 3 cut(s) 774, 836, 1984
PstI CTGCAG 2 cut(s) 752, 1918
PsuI RGATCY 2 cut(s) 152, 455
RsaI GTAC 5 cut(s) 420, 959, 1058, 1336, 1924
RsaNI GTAC 5 cut(s) 419, 958, 1057, 1335, 1923
RseI CAYNNNNRTG 3 cut(s) 818, 1706, 2343
SapI GCTCTTC 1 cut(s) 359
SaqAI TTAA 2 cut(s) 102, 1722
SatI GCNGC 7 cut(s) 386, 555, 660, 748, 787, 1866, 1914
Sau3AI GATC 5 cut(s) 152, 455, 1041, 1690, 2116
Sau96I GGNCC 3 cut(s) 774, 836, 1984
ScaI AGTACT 1 cut(s) 1058
SchI GAGTC 5 cut(s) 493, 513, 596, 1616, 1627
ScrFI CCNGG 8 cut(s) 144, 773, 834, 1247, 1517, 1839, 1882, 2244
SduI GDGCHC 2 cut(s) 1473, 1713
SexAI ACCWGGT 1 cut(s) 832
SfaNI GCATC 4 cut(s) 903, 1119, 1261, 1296
SfcI CTRYAG 2 cut(s) 748, 1914
SinI GGWCC 2 cut(s) 836, 1984
SmiMI CAYNNNNRTG 3 cut(s) 818, 1706, 2343
SmlI CTYRAG 1 cut(s) 1151
SmoI CTYRAG 1 cut(s) 1151
SpeI ACTAGT 1 cut(s) 1219
SseBI AGGCCT 2 cut(s) 142, 2132
SsiI CCGC 5 cut(s) 44, 53, 786, 1868, 2375
SspMI CTAG 3 cut(s) 476, 1220, 1466
StuI AGGCCT 2 cut(s) 142, 2132
StyD4I CCNGG 8 cut(s) 142, 771, 832, 1245, 1515, 1837, 1880, 2242
StyI CCWWGG 5 cut(s) 1188, 1376, 1622, 1782, 1987
TaaI ACNGT 5 cut(s) 379, 415, 1048, 1665, 2088
TaiI ACGT 7 cut(s) 127, 292, 1004, 1509, 1606, 1650, 1846
TaqI TCGA 1 cut(s) 1328
TatI WGTACW 3 cut(s) 418, 957, 1056
TauI GCSGC 1 cut(s) 789
TfiI GAWTC 4 cut(s) 1091, 1740, 2081, 2191
Tru1I TTAA 2 cut(s) 102, 1722
Tru9I TTAA 2 cut(s) 102, 1722
TscAI CASTG 5 cut(s) 973, 1051, 1281, 1478, 1670
TseFI GTSAC 2 cut(s) 1502, 1824
TseI GCWGC 6 cut(s) 385, 554, 659, 747, 1865, 1913
Tsp45I GTSAC 2 cut(s) 1502, 1824
TspDTI ATGAA 6 cut(s) 149, 709, 1562, 2158, 2373, 2387
TspGWI ACGGA 1 cut(s) 1560
TspRI CASTG 5 cut(s) 973, 1051, 1281, 1478, 1670
Van91I CCANNNNNTGG 1 cut(s) 1887
VpaK11BI GGWCC 2 cut(s) 836, 1984
VspI ATTAAT 1 cut(s) 1722
XapI RAATTY 5 cut(s) 847, 1429, 1486, 1554, 2204
XceI RCATGY 1 cut(s) 1081
XmnI GAANNNNTTC 1 cut(s) 2394
XspI CTAG 3 cut(s) 476, 1220, 1466
ZrmI AGTACT 1 cut(s) 1058
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.