Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0001428

Physical Location & Seq

Genomic Coordinates Forward (+)

15378062 .. 15382970

Gene Structure 4909 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1050500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGCGAGTCCAACTCAGGACATGATCGACACGTACATGAGCATCACCGGCGCGTCTCACTCACTCGCGATTCGGAAGCTGGAGGAATACGGAGGAAATCTCAGTGAAGCTGTGAATGCACATTTTGGGGGAGGATATAGAGACTTTACAAATCCGGGGTCGGCTGCTAACCCCCAGTACAATTTCTCTCATATGGACGGTCAGAATCAAGTTGCACCACATGCTTACCCGCAATACAATAATATGAGTGCTCAGAATCAAGTTGCACCGCAAGGACTTGGACCACTTCTCTCTGCTGCTAGGAGTTTCAGGCCCTCGTTACTATTTGATCCTAATTACAGTAGAGATCTCTTTAATCGAATCACCGGTCGTGCACCATTAATTTCACAGCCAGGAGCGGTACCTGGGGTTCCTGTGGAGTTTAACAGAGGGAATGATCAGCCTCATCTCTCAGGACAGAGGCCTCCCATTCAGGACATGACAGGAAATCTACATGGAAGTGATGTGGAGGAGGAAATGATTCGAGCTGCTATTGAGGCTTCAAAACAAGACGCTCAAAAGGCTTATCTTCTGAATATGCAAAGCAGGGCTCAAAATGTGTCTCCTGTTAATGGGCTTCCAGATAATCAAATTCACCTAGATAACAGTGATTTTAATCGTGCAGTTTCACTGTCCCTGAAGACAGCAGAACGAGAGAAAGCGATGCGTGAGCAACAAATGAAAGATAAGAATCAAGTACCAGGAACTTATAGTACATCAAAGTGGGAAACCTCAATGCACCAAGATGGAGATGGAACTGTAGAAAGAAAACAAGCGAGTCAAGAGTTGTGGCATGATTCTGGTAACAATCTTCAGCAGGGTAACATTGCCATTAATTCTGAAGAGTTAGGCGGCATTTCTTCCAAAGAGCTTGACGAAGCTATACTGCTTGAGAATGCACTTTTTGGTGAATCCTCATATGCACCTAATTTTCCAAGTGGTCCAAGTAGAAATTTGGATCCTAATTTGCAGCCTGTTCATGGCCCTTCATCATCCGCTCTAACAAGACAATTGCTTAGAGAACAACAGGATTGTGAGTATCTCGCATCCCTCTTGGCTGATAAAGAAAAGGAAATGAATGGTGTTAATGAAGTTGGAACTTGTGACATAAAGGATGTCGGCTCTGACAACAAAAAGATTGATCCATTGGAACTCGAGAGTAGGCTTGCTGCGAAAGGGGCTTCGCTTCCTTGTGAACCAGCAATAGATGATCAGAATGCTGTGACTCTTCTTGTTAGGATGCCAAATGGAACTCGCCTTAGTCGCCGCTTTAACAAGTCCGACAAGCTTCAGGTTCTGTTCGACTTCATAGATGTTGGTAGAGAGGTGAAGCCTGGAACTTACAGAGTGGTGAGGTCATATCCTCGGCGTGCTTTTACTGTTGGTGACAGCATACTATCATTGAGTGAACTTGGCTTGACAAATAAACAAGAAGCTCTGTTTCTGGAATTGATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UBA_4 UBX UIM

Protein Analysis

499

Amino Acids

54.74

Weight (kDa)

5.23

Isoelectric Point (pI)

45.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UBA_4	PF14555	6 - 43	3.4e-08	UBA-like domain
UBX	PF00789	417 - 496	1.6e-18	UBX domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00752
fragaria_vesca	FvH4_7g13300 FvH4_7g13300 FvH4_7g13300 FvH4_7g13300 FvH4_7g13300
malus_domestica	MD01G1050500.v1.1
prunus_persica	Prupe.2G156600_v2.0.a1
pyrus_communis	pycom01g07530
rosa_chinensis	RchiOBHm_Chr1g0329331 RchiOBHm_Chr1g0352561 RchiOBHm_Chr3g0481331 RchiOBHm_Chr4g0427171
rosa_laevigata	RLG00000028330
rosa_multiflora	Rmu_sc0000147.1_g000024 Rmu_sc0000911.1_g000033 Rmu_sc0008564.1_g000023 Rmu_sc0008823.1_g000008 Rmu_sc0019045.1_g000001
rosa_roxburghii	Rroxscaffold_4G00302630 Rroxscaffold_7G00169710 Rroxscaffold_7G00203150 Rroxscaffold_7G00213050
rosa_rugosa	Rorug01G0230100 Rorug04G0062700 Rorug04G0062800 Rorug04G0062900
rosa_samantha	Rh1AG202000 Rh1AG243600 Rh1BG214200 Rh1CG186900 Rh1CG226800 Rh1CG227100 Rh1DG240200 Rh2AG182200 Rh2DG188600 Rh3AG242000 Rh3DG289800 Rh4DG117700 Rh4DG164500 Rh6CG130000 Rh6CG255900 Rh7DG285300 Rh7DG364500
rosa_wichuraiana	Rw0G009430 Rw1G017790 Rw1G021300 Rw3G029580 Rw4G002460 Rw4G019570 Rw6G016170 Rw7G038890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	400
AccB1I	GGYRCC	1 cut(s)	400
AccBSI	CCGCTC	2 cut(s)	398, 1037
AccII	CGCG	2 cut(s)	53, 68
AciI	CCGC	6 cut(s)	230, 269, 398, 891, 1035, 1306
AclWI	GGATC	4 cut(s)	323, 992, 1005, 1175
AcsI	RAATTY	2 cut(s)	630, 991
AcuI	CTGAAG	4 cut(s)	698, 836, 900, 1313
AfaI	GTAC	5 cut(s)	35, 179, 402, 738, 754
AfiI	CCNNNNNNNGG	2 cut(s)	611, 1019
AflIII	ACRYGT	1 cut(s)	30
AgeI	ACCGGT	1 cut(s)	365
AgsI	TTSAA	1 cut(s)	543
AjnI	CCWGG	4 cut(s)	391, 403, 739, 1372
AluBI	AGCT	7 cut(s)	79, 110, 527, 910, 920, 1327, 1475
AluI	AGCT	7 cut(s)	79, 110, 527, 910, 920, 1327, 1475
Alw21I	GWGCWC	2 cut(s)	253, 376
Alw26I	GTCTC	3 cut(s)	60, 135, 606
Alw44I	GTGCAC	1 cut(s)	372
AlwI	GGATC	4 cut(s)	323, 992, 1005, 1175
AlwNI	CAGNNNCTG	1 cut(s)	1336
Ama87I	CYCGRG	1 cut(s)	1193
AoxI	GGCC	3 cut(s)	311, 461, 1021
ApaLI	GTGCAC	1 cut(s)	372
ApeKI	GCWGC	5 cut(s)	164, 296, 527, 1009, 1208
ApoI	RAATTY	2 cut(s)	630, 991
ArsI	GACNNNNNNTTYG	4 cut(s)	143, 175, 352, 384
AseI	ATTAAT	2 cut(s)	380, 873
AsiGI	ACCGGT	1 cut(s)	365
Asp700I	GAANNNNTTC	1 cut(s)	519
Asp718I	GGTACC	1 cut(s)	400
AspLEI	GCGC	1 cut(s)	53
AspS9I	GGNCC	4 cut(s)	281, 312, 980, 1022
AsuC2I	CCSGG	1 cut(s)	156
AsuHPI	GGTGA	7 cut(s)	37, 355, 626, 959, 1378, 1402, 1436
AvaI	CYCGRG	1 cut(s)	1193
AvaII	GGWCC	2 cut(s)	281, 980
BaeGI	GKGCMC	1 cut(s)	376
BamHI	GGATCC	1 cut(s)	997
BanI	GGYRCC	1 cut(s)	400
BanII	GRGCYC	1 cut(s)	592
BbsI	GAAGAC	1 cut(s)	686
Bbv12I	GWGCWC	2 cut(s)	253, 376
BbvI	GCAGC	5 cut(s)	151, 283, 514, 1021, 1195
BccI	CCATC	2 cut(s)	779, 785
BciT130I	CCWGG	4 cut(s)	393, 405, 741, 1374
BclI	TGATCA	2 cut(s)	436, 1249
BcnI	CCSGG	1 cut(s)	156
BcoDI	GTCTC	3 cut(s)	60, 135, 606
BfaI	CTAG	2 cut(s)	300, 638
BfmI	CTRYAG	1 cut(s)	798
BglII	AGATCT	1 cut(s)	346
BisI	GCNGC	7 cut(s)	165, 297, 528, 892, 1010, 1209, 1306
BlsI	GCNGC	7 cut(s)	166, 298, 529, 893, 1011, 1210, 1307
Bme1390I	CCNGG	5 cut(s)	156, 393, 405, 741, 1374
Bme18I	GGWCC	2 cut(s)	281, 980
BmeT110I	CYCGRG	1 cut(s)	1193
BmgT120I	GGNCC	4 cut(s)	281, 312, 980, 1022
BmiI	GGNNCC	3 cut(s)	402, 411, 999
BmrFI	CCNGG	5 cut(s)	156, 393, 405, 741, 1374
BmrI	ACTGGG	1 cut(s)	169
BmsI	GCATC	4 cut(s)	51, 693, 1094, 1269
BmuI	ACTGGG	1 cut(s)	169
BpiI	GAAGAC	1 cut(s)	686
BplI	GAGNNNNNCTC	3 cut(s)	30, 84, 116
BpmI	CTGGAG	1 cut(s)	101
BpuEI	CTTGAG	1 cut(s)	950
BpuMI	CCSGG	1 cut(s)	156
BsaAI	YACGTR	1 cut(s)	33
BsaBI	GATNNNNATC	2 cut(s)	654, 729
BsaJI	CCNNGG	3 cut(s)	155, 404, 1403
BsaWI	WCCGGW	1 cut(s)	365
Bsc4I	CCNNNNNNNGG	2 cut(s)	611, 1019
Bse118I	RCCGGY	2 cut(s)	47, 365
Bse1I	ACTGG	1 cut(s)	175
Bse3DI	GCAATG	1 cut(s)	864
Bse8I	GATNNNNATC	2 cut(s)	654, 729
BseBI	CCWGG	4 cut(s)	393, 405, 741, 1374
BseDI	CCNNGG	3 cut(s)	155, 404, 1403
BseGI	GGATG	4 cut(s)	1031, 1085, 1159, 1284
BseJI	GATNNNNATC	2 cut(s)	654, 729
BseLI	CCNNNNNNNGG	2 cut(s)	611, 1019
BseMI	GCAATG	1 cut(s)	864
BseMII	CTCAG	4 cut(s)	29, 115, 266, 465
BseNI	ACTGG	1 cut(s)	175
BseRI	GAGGAG	1 cut(s)	524
BseSI	GKGCMC	1 cut(s)	376
BseXI	GCAGC	5 cut(s)	151, 283, 514, 1021, 1195
BsgI	GTGCAG	1 cut(s)	681
Bsh1236I	CGCG	2 cut(s)	53, 68
Bsh1285I	CGRYCG	1 cut(s)	370
BshFI	GGCC	3 cut(s)	313, 463, 1023
BshNI	GGYRCC	1 cut(s)	400
BshTI	ACCGGT	1 cut(s)	365
BsiEI	CGRYCG	1 cut(s)	370
BsiHKAI	GWGCWC	2 cut(s)	253, 376
BsiHKCI	CYCGRG	1 cut(s)	1193
BsiSI	CCGG	3 cut(s)	48, 155, 366
BslFI	GGGAC	1 cut(s)	658
BslI	CCNNNNNNNGG	2 cut(s)	611, 1019
BsmAI	GTCTC	3 cut(s)	60, 135, 606
BsmBI	CGTCTC	1 cut(s)	60
BsmFI	GGGAC	1 cut(s)	658
BsmI	GAATGC	3 cut(s)	121, 940, 1261
BsnI	GGCC	3 cut(s)	313, 463, 1023
BsoBI	CYCGRG	1 cut(s)	1193
Bsp1286I	GDGCHC	3 cut(s)	253, 376, 592
Bsp143I	GATC	7 cut(s)	24, 328, 346, 436, 997, 1180, 1249
Bsp68I	TCGCGA	1 cut(s)	68
BspACI	CCGC	6 cut(s)	230, 269, 398, 891, 1035, 1306
BspANI	GGCC	3 cut(s)	313, 463, 1023
BspCNI	CTCAG	4 cut(s)	28, 114, 265, 464
BspFNI	CGCG	2 cut(s)	53, 68
BspLI	GGNNCC	3 cut(s)	402, 411, 999
BspPI	GGATC	4 cut(s)	323, 992, 1005, 1175
BspT107I	GGYRCC	1 cut(s)	400
BsrBI	CCGCTC	2 cut(s)	398, 1037
BsrDI	GCAATG	1 cut(s)	864
BsrFI	RCCGGY	2 cut(s)	47, 365
BsrI	ACTGG	1 cut(s)	175
BssAI	RCCGGY	2 cut(s)	47, 365
BssECI	CCNNGG	3 cut(s)	155, 404, 1403
BssMI	GATC	7 cut(s)	24, 328, 346, 436, 997, 1180, 1249
Bst2UI	CCWGG	4 cut(s)	393, 405, 741, 1374
Bst4CI	ACNGT	6 cut(s)	200, 341, 647, 672, 799, 1420
Bst6I	CTCTTC	2 cut(s)	876, 1272
BstAPI	GCANNNNNTGC	1 cut(s)	221
BstBAI	YACGTR	1 cut(s)	33
BstC8I	GCNNGC	2 cut(s)	1206, 1410
BstDEI	CTNAG	6 cut(s)	15, 101, 252, 451, 1055, 1298
BstF5I	GGATG	4 cut(s)	1031, 1085, 1159, 1284
BstFNI	CGCG	2 cut(s)	53, 68
BstHHI	GCGC	1 cut(s)	53
BstKTI	GATC	7 cut(s)	27, 331, 349, 439, 1000, 1183, 1252
BstMAI	GTCTC	3 cut(s)	60, 135, 606
BstMBI	GATC	7 cut(s)	24, 328, 346, 436, 997, 1180, 1249
BstMCI	CGRYCG	1 cut(s)	370
BstMWI	GCNNNNNNNGC	7 cut(s)	48, 116, 221, 536, 560, 1217, 1302
BstNI	CCWGG	4 cut(s)	393, 405, 741, 1374
BstNSI	RCATGY	1 cut(s)	224
BstSCI	CCNGG	5 cut(s)	154, 391, 403, 739, 1372
BstSFI	CTRYAG	1 cut(s)	798
BstSLI	GKGCMC	1 cut(s)	376
BstUI	CGCG	2 cut(s)	53, 68
BstV1I	GCAGC	5 cut(s)	151, 283, 514, 1021, 1195
BstV2I	GAAGAC	1 cut(s)	686
BstX2I	RGATCY	2 cut(s)	346, 997
BstYI	RGATCY	2 cut(s)	346, 997
BsuRI	GGCC	3 cut(s)	313, 463, 1023
BtgZI	GCGATG	1 cut(s)	716
BtsCI	GGATG	4 cut(s)	1031, 1085, 1159, 1284
BtsIMutI	CAGTG	3 cut(s)	109, 652, 668
BtuMI	TCGCGA	1 cut(s)	68
Cac8I	GCNNGC	2 cut(s)	1206, 1410
CaiI	CAGNNNCTG	1 cut(s)	1336
CfoI	GCGC	1 cut(s)	53
Cfr10I	RCCGGY	2 cut(s)	47, 365
Cfr13I	GGNCC	4 cut(s)	281, 312, 980, 1022
CseI	GACGC	2 cut(s)	42, 560
Csp6I	GTAC	5 cut(s)	34, 178, 401, 737, 753
CspAI	ACCGGT	1 cut(s)	365
CspCI	CAANNNNNGTGG	2 cut(s)	809, 844
CviAII	CATG	7 cut(s)	22, 37, 221, 478, 494, 833, 1019
CviQI	GTAC	5 cut(s)	34, 178, 401, 737, 753
DdeI	CTNAG	6 cut(s)	15, 101, 252, 451, 1055, 1298
DpnI	GATC	7 cut(s)	26, 330, 348, 438, 999, 1182, 1251
DpnII	GATC	7 cut(s)	24, 328, 346, 436, 997, 1180, 1249
Eam1104I	CTCTTC	2 cut(s)	876, 1272
EarI	CTCTTC	2 cut(s)	876, 1272
Eco147I	AGGCCT	1 cut(s)	463
Eco24I	GRGCYC	1 cut(s)	592
Eco47I	GGWCC	2 cut(s)	281, 980
Eco57I	CTGAAG	4 cut(s)	698, 836, 900, 1313
Eco88I	CYCGRG	1 cut(s)	1193
EcoO109I	RGGNCCY	1 cut(s)	312
EcoRII	CCWGG	4 cut(s)	391, 403, 739, 1372
EcoT38I	GRGCYC	1 cut(s)	592
Esp3I	CGTCTC	1 cut(s)	60
FaeI	CATG	7 cut(s)	25, 40, 224, 481, 497, 836, 1022
FaqI	GGGAC	1 cut(s)	658
FatI	CATG	7 cut(s)	21, 36, 220, 477, 493, 832, 1018
FauI	CCCGC	1 cut(s)	237
FauNDI	CATATG	2 cut(s)	192, 958
FbaI	TGATCA	2 cut(s)	436, 1249
Fnu4HI	GCNGC	7 cut(s)	165, 297, 528, 892, 1010, 1209, 1306
FokI	GGATG	4 cut(s)	1018, 1072, 1166, 1291
FriOI	GRGCYC	1 cut(s)	592
Fsp4HI	GCNGC	7 cut(s)	165, 297, 528, 892, 1010, 1209, 1306
FspBI	CTAG	2 cut(s)	300, 638
GlaI	GCGC	1 cut(s)	52
GluI	GCNGC	7 cut(s)	165, 297, 528, 892, 1010, 1209, 1306
GsuI	CTGGAG	1 cut(s)	101
HaeIII	GGCC	3 cut(s)	313, 463, 1023
HapII	CCGG	3 cut(s)	48, 155, 366
HgaI	GACGC	2 cut(s)	42, 560
HhaI	GCGC	1 cut(s)	53
Hin1II	CATG	7 cut(s)	25, 40, 224, 481, 497, 836, 1022
Hin6I	GCGC	1 cut(s)	51
HinP1I	GCGC	1 cut(s)	51
HindIII	AAGCTT	1 cut(s)	1325
HpaII	CCGG	3 cut(s)	48, 155, 366
HphI	GGTGA	7 cut(s)	37, 355, 626, 959, 1378, 1402, 1436
Hpy166II	GTNNAC	3 cut(s)	374, 1235, 1448
Hpy188I	TCNGA	8 cut(s)	75, 204, 255, 573, 880, 1165, 1254, 1321
Hpy188III	TCNNGA	8 cut(s)	17, 67, 453, 473, 620, 821, 1195, 1484
Hpy8I	GTNNAC	3 cut(s)	374, 1235, 1448
HpyAV	CCTTC	1 cut(s)	1035
HpyCH4III	ACNGT	6 cut(s)	200, 341, 647, 672, 799, 1420
HpyCH4IV	ACGT	1 cut(s)	32
HpyF10VI	GCNNNNNNNGC	7 cut(s)	48, 116, 221, 536, 560, 1217, 1302
HpyF3I	CTNAG	6 cut(s)	15, 101, 252, 451, 1055, 1298
HpySE526I	ACGT	1 cut(s)	32
Hsp92II	CATG	7 cut(s)	25, 40, 224, 481, 497, 836, 1022
HspAI	GCGC	1 cut(s)	51
KpnI	GGTACC	1 cut(s)	404
Ksp22I	TGATCA	2 cut(s)	436, 1249
Kzo9I	GATC	7 cut(s)	24, 328, 346, 436, 997, 1180, 1249
LmnI	GCTCC	1 cut(s)	395
Lsp1109I	GCAGC	5 cut(s)	151, 283, 514, 1021, 1195
LweI	GCATC	4 cut(s)	51, 693, 1094, 1269
MaeI	CTAG	2 cut(s)	300, 638
MaeII	ACGT	1 cut(s)	32
MaeIII	GTNAC	6 cut(s)	318, 842, 860, 1142, 1261, 1424
MalI	GATC	7 cut(s)	26, 330, 348, 438, 999, 1182, 1251
MbiI	CCGCTC	2 cut(s)	398, 1037
MboI	GATC	7 cut(s)	24, 328, 346, 436, 997, 1180, 1249
MboII	GAAGA	6 cut(s)	560, 691, 842, 891, 893, 1259
MfeI	CAATTG	1 cut(s)	1049
MflI	RGATCY	2 cut(s)	346, 997
MhlI	GDGCHC	3 cut(s)	253, 376, 592
MlyI	GAGTC	3 cut(s)	16, 826, 1258
MmeI	TCCRAC	3 cut(s)	35, 1114, 1344
MroXI	GAANNNNTTC	1 cut(s)	519
MseI	TTAA	8 cut(s)	354, 380, 423, 609, 654, 873, 1125, 1311
MslI	CAYNNNNRTG	4 cut(s)	35, 498, 760, 783
MspI	CCGG	3 cut(s)	48, 155, 366
MspR9I	CCNGG	5 cut(s)	156, 393, 405, 741, 1374
MunI	CAATTG	1 cut(s)	1049
Mva1269I	GAATGC	3 cut(s)	121, 940, 1261
MvaI	CCWGG	4 cut(s)	393, 405, 741, 1374
MvnI	CGCG	2 cut(s)	53, 68
MwoI	GCNNNNNNNGC	7 cut(s)	48, 116, 221, 536, 560, 1217, 1302
NciI	CCSGG	1 cut(s)	156
NdeI	CATATG	2 cut(s)	192, 958
NdeII	GATC	7 cut(s)	24, 328, 346, 436, 997, 1180, 1249
NlaIII	CATG	7 cut(s)	25, 40, 224, 481, 497, 836, 1022
NlaIV	GGNNCC	3 cut(s)	402, 411, 999
NmeAIII	GCCGAG	1 cut(s)	1384
NmuCI	GTSAC	3 cut(s)	1142, 1261, 1424
NruI	TCGCGA	1 cut(s)	68
NspI	RCATGY	1 cut(s)	224
PaeR7I	CTCGAG	1 cut(s)	1193
PceI	AGGCCT	1 cut(s)	463
PctI	GAATGC	3 cut(s)	121, 940, 1261
PdmI	GAANNNNTTC	1 cut(s)	519
PfeI	GAWTC	8 cut(s)	70, 205, 256, 360, 520, 730, 836, 950
PinAI	ACCGGT	1 cut(s)	365
PkrI	GCNGC	7 cut(s)	166, 298, 529, 893, 1011, 1210, 1307
PleI	GAGTC	3 cut(s)	15, 825, 1258
PpsI	GAGTC	3 cut(s)	15, 825, 1258
Ppu21I	YACGTR	1 cut(s)	33
PshBI	ATTAAT	2 cut(s)	380, 873
Psp6I	CCWGG	4 cut(s)	391, 403, 739, 1372
PspGI	CCWGG	4 cut(s)	391, 403, 739, 1372
PspN4I	GGNNCC	3 cut(s)	402, 411, 999
PspPI	GGNCC	4 cut(s)	281, 312, 980, 1022
PsrI	GAACNNNNNNTAC	4 cut(s)	393, 425, 736, 768
PstNI	CAGNNNCTG	1 cut(s)	1336
PsuI	RGATCY	2 cut(s)	346, 997
RruI	TCGCGA	1 cut(s)	68
RsaI	GTAC	5 cut(s)	35, 179, 402, 738, 754
RsaNI	GTAC	5 cut(s)	34, 178, 401, 737, 753
RseI	CAYNNNNRTG	4 cut(s)	35, 498, 760, 783
SaqAI	TTAA	8 cut(s)	354, 380, 423, 609, 654, 873, 1125, 1311
SatI	GCNGC	7 cut(s)	165, 297, 528, 892, 1010, 1209, 1306
Sau3AI	GATC	7 cut(s)	24, 328, 346, 436, 997, 1180, 1249
Sau96I	GGNCC	4 cut(s)	281, 312, 980, 1022
SchI	GAGTC	3 cut(s)	16, 826, 1258
ScrFI	CCNGG	5 cut(s)	156, 393, 405, 741, 1374
SduI	GDGCHC	3 cut(s)	253, 376, 592
SfaNI	GCATC	4 cut(s)	51, 693, 1094, 1269
SfcI	CTRYAG	1 cut(s)	798
Sfr274I	CTCGAG	1 cut(s)	1193
SgrAI	CRCCGGYG	1 cut(s)	47
SinI	GGWCC	2 cut(s)	281, 980
SlaI	CTCGAG	1 cut(s)	1193
SmiMI	CAYNNNNRTG	4 cut(s)	35, 498, 760, 783
SmlI	CTYRAG	2 cut(s)	929, 1193
SmoI	CTYRAG	2 cut(s)	929, 1193
SseBI	AGGCCT	1 cut(s)	463
SsiI	CCGC	6 cut(s)	230, 269, 398, 891, 1035, 1306
SspMI	CTAG	2 cut(s)	300, 638
StuI	AGGCCT	1 cut(s)	463
StyD4I	CCNGG	5 cut(s)	154, 391, 403, 739, 1372
TaaI	ACNGT	6 cut(s)	200, 341, 647, 672, 799, 1420
TaiI	ACGT	1 cut(s)	35
TaqI	TCGA	5 cut(s)	27, 358, 523, 1194, 1341
TatI	WGTACW	2 cut(s)	177, 752
TauI	GCSGC	2 cut(s)	894, 1308
TfiI	GAWTC	8 cut(s)	70, 205, 256, 360, 520, 730, 836, 950
Tru1I	TTAA	8 cut(s)	354, 380, 423, 609, 654, 873, 1125, 1311
Tru9I	TTAA	8 cut(s)	354, 380, 423, 609, 654, 873, 1125, 1311
TscAI	CASTG	3 cut(s)	109, 652, 675
TseFI	GTSAC	3 cut(s)	1142, 1261, 1424
TseI	GCWGC	5 cut(s)	164, 296, 527, 1009, 1208
Tsp45I	GTSAC	3 cut(s)	1142, 1261, 1424
TspDTI	ATGAA	6 cut(s)	734, 1007, 1017, 1130, 1143, 1336
TspGWI	ACGGA	1 cut(s)	105
TspRI	CASTG	3 cut(s)	109, 652, 675
VneI	GTGCAC	1 cut(s)	372
VpaK11BI	GGWCC	2 cut(s)	281, 980
VspI	ATTAAT	2 cut(s)	380, 873
XapI	RAATTY	2 cut(s)	630, 991
XceI	RCATGY	1 cut(s)	224
XcmI	CCANNNNNNNNNTGG	1 cut(s)	788
XhoI	CTCGAG	1 cut(s)	1193
XmnI	GAANNNNTTC	1 cut(s)	519
XspI	CTAG	2 cut(s)	300, 638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.