Rh1AG243600

UBA-like domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0001428
Physical Location & Seq
Reverse (-)
45599072 .. 45658914
59843 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG243600.1

Sequence Viewer

Length: 2088 bp
ATGGAGTTCACCAACCAGAGCAAATGCATCTGCAGTTTGGCATTGGTCCTCATGTTGGCGGCTTGGTCTTCGGAAGCCACTTCTCGTAGTCTCCAAGATGCATTAGCTTATGGGAGGTACGAGCAATGGATAGCTCGTTATGGTCGTGTATACAATGACATCAACGAGAAGGAGGAGCGCTTCAAGATATTCAAGGACAATGAGGCATTTGTAGAATCTTCCAACAAAGATGGAAACAAACTTTACAAATTGAGTCTGAATCAATTTGCAGACCTTACAAATGAAGAGTTCACTGCCTCAAGAAATGGATTCAAGGGCCACGAATGTTCCACGAAAACCACTACTTTCAAGTATGAAAATTCAACTGTGCCGGCTACAATGGACTGGAGAAAGAAGGGAGCTGTAACTCCCGTCAAGGATCAAGGCCAATGTGGAAGTTGTTGGGCATTCTCCGCAGTGGGAGCTATGGAAGGAATCACTCAACTTACAACTGGTAAACTAATCTCTTTGTCTGAGCAAGAGCTTGTTGACTGTGATGTCAAAGGTGTAGACCAAGGCTGTGCAGGTGGCCTTATGGATGATGCATTTCAGTTTGTTATTCAAAATCATGGTATTAATACCGAGGCTAATTATCCCTACACGGCTGTCGATGCGATGCCGAGGCCAACTGAGGACATGATCCAGACCTACGTCAGCCTCACCGGCGCGTCTCACTCACTTGCGCTGCTAAAGCTCGAGGAACATGGAGGCGATCTCAATGAAGCTGTGAATGCACATTTTAGGGAAGGAGATGTACACAGTACAAGTCCTTCGTCTACTGCTCCCCCACAGTACAATTTCCCTCAAATGAGTAATCAGAATCAAGTAGCACCACAACAAGGACTTCTGCCACTTCTCTCTGTTGCCAGGAGTTTCAAGCCTTCATTACTACTTGACCGTAGTTACAGTAGAGATCTCTACAATCGGATTGGTTCTGCATTAACTGGTCGGGCACCATCACCTTCACACCCAGGAGAGGTAACTGGGGTTCCTGTAGGTTTCAATGCCGGGAATGAGCAGCCTTATCTCTCAGGACAGAGGCCTACAATTCCGGATGTGGCAAGAACTGACTTGGATGCCTCAAGATATGGCAATGATGTGGAGGAAGAAATGATTCAAGCTGCTATTGAAGCTTCAAAACGAGAAGCTGAAATGGGTTCTCCGAATGTGCGAAACAGTACTCCCAATGTATCTCCTGGTAATGGGCTTCCGGTTGAGAAAATTCCTGAAGAAAATTCAGATTTTGATCGTGCAGTTTCGTTGTCCTTGAAGACAGCAGAACAAGAGAAAGCAATACGTGAGATGCAGCTGAACGACAGGAATCAAGATCCAGGAGTTTATAGTACATGGAAGCAAGGAAGGTCATCACAGCAAAATGGAGCTGAAGTTGTAGAGCAGCAATTAGTTAGTGAAGAGCCTAAGTGTGATGGTGGTAGTCATCTTCAGCAGGGAAAACTGGCAACTCACAGTGATGAGTTGGGAAGCTTATCTCCAAAAGAGCTTGACGAAGCAATTATGCTTGAGACTGCACTTTTTGGTAAATCTCCATACACTCCTAATAATCAGCCTATACATGGCTCTTCCTCATCCTCTCTATCAGCAAGGCAATTGCTCAGAGAACAACAGGATGATGAGTATCTTGCATCCCTCTTAGCTGATAAAGAGAAAGAAATGAATGCTGTCCATGAAGCTGCAACTTGTCAGTTGAAGGGAGATGTCAACAAAAGAATCGAGCCAATGGAATTTGAGAGAAGGCTAGATGCAAAAAGTGCTTCACTTCCTTGTGAACCAGCACCAGATGATGAGAATGCTGTGACTCTTCTTGTTCGGATGCCAAATGGCAGCCGCCTTAGCCGTCGCTTTCGCAAATCTGACAGGCTTCAGCTTCTTTTTGACTTCATAGATGTTGGTAGAGTGGTGGGGCCTGGAACTTACAGAGTGGTGAGGTCATATCCTCGGCATGCTTTCACCGCCAATAACAGCTTATTAACATTGAGTGAACTTGGCCTGACCAACAAGCAAGAAGCATTATTTTTGGAACTGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UBA_4 UBX UIM

Protein Analysis

695

Amino Acids

76.65

Weight (kDa)

5.1

Isoelectric Point (pI)

39.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 40 - 97 4.9e-17 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 123 - 224 1.5e-39 Papain family cysteine protease
UBA_4 PF14555 224 - 264 1.7e-08 UBA-like domain
UBX PF00789 614 - 693 6.7e-17 UBX domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 554
AasI GACNNNNNNGTC 1 cut(s) 536
Acc36I ACCTGC 1 cut(s) 554
AccB1I GGYRCC 1 cut(s) 991
AccI GTMKAC 3 cut(s) 150, 549, 815
AccII CGCG 1 cut(s) 707
AccIII TCCGGA 1 cut(s) 1090
AciI CCGC 4 cut(s) 59, 453, 1885, 2010
AclWI GGATC 3 cut(s) 426, 673, 1361
AcsI RAATTY 4 cut(s) 358, 1260, 1273, 1781
AcuI CTGAAG 4 cut(s) 1287, 1443, 1466, 1904
AfaI GTAC 6 cut(s) 119, 795, 802, 833, 1219, 1384
AfeI AGCGCT 1 cut(s) 179
AfiI CCNNNNNNNGG 5 cut(s) 55, 878, 1015, 1241, 1613
AjnI CCWGG 5 cut(s) 905, 1009, 1234, 1369, 1963
Alw26I GTCTC 3 cut(s) 95, 714, 1556
AlwI GGATC 3 cut(s) 426, 673, 1361
Ama87I CYCGRG 1 cut(s) 734
Aor13HI TCCGGA 1 cut(s) 1090
Aor51HI AGCGCT 1 cut(s) 179
AoxI GGCC 7 cut(s) 316, 424, 568, 662, 1079, 1961, 2044
ApeKI GCWGC 7 cut(s) 724, 1057, 1160, 1345, 1435, 1730, 1881
ApoI RAATTY 4 cut(s) 358, 1260, 1273, 1781
AseI ATTAAT 1 cut(s) 615
Asp700I GAANNNNTTC 1 cut(s) 1152
AspLEI GCGC 3 cut(s) 180, 707, 724
AspS9I GGNCC 3 cut(s) 46, 316, 1961
AsuC2I CCSGG 1 cut(s) 1048
AsuHPI GGTGA 4 cut(s) 691, 990, 1993, 1999
AvaI CYCGRG 1 cut(s) 734
AvaII GGWCC 1 cut(s) 46
BaeGI GKGCMC 1 cut(s) 994
BanI GGYRCC 1 cut(s) 991
BarI GAAGNNNNNNTAC 4 cut(s) 777, 793, 809, 825
BbsI GAAGAC 2 cut(s) 60, 1316
BbvI GCAGC 7 cut(s) 711, 1069, 1147, 1357, 1447, 1717, 1893
BccI CCATC 3 cut(s) 224, 1003, 1460
BceAI ACGGC 2 cut(s) 657, 1878
BciT130I CCWGG 5 cut(s) 907, 1011, 1236, 1371, 1965
BcnI CCSGG 1 cut(s) 1048
BcoDI GTCTC 3 cut(s) 95, 714, 1556
BfaI CTAG 1 cut(s) 1796
BfmI CTRYAG 2 cut(s) 31, 1032
BfoI RGCGCY 1 cut(s) 181
BfuAI ACCTGC 1 cut(s) 554
BglI GCCNNNNNGGC 1 cut(s) 702
BglII AGATCT 1 cut(s) 952
BisI GCNGC 9 cut(s) 60, 725, 1058, 1161, 1346, 1436, 1731, 1882, 1885
BlsI GCNGC 9 cut(s) 61, 726, 1059, 1162, 1347, 1437, 1732, 1883, 1886
BmcAI AGTACT 1 cut(s) 1219
Bme1390I CCNGG 6 cut(s) 907, 1011, 1048, 1236, 1371, 1965
Bme18I GGWCC 1 cut(s) 46
BmeT110I CYCGRG 1 cut(s) 734
BmgT120I GGNCC 3 cut(s) 46, 316, 1961
BmiI GGNNCC 3 cut(s) 993, 1029, 1962
BmrFI CCNGG 6 cut(s) 907, 1011, 1048, 1236, 1371, 1965
BmrI ACTGGG 1 cut(s) 1032
BmuI ACTGGG 1 cut(s) 1032
BoxI GACNNNNGTC 1 cut(s) 689
BpiI GAAGAC 2 cut(s) 60, 1316
BplI GAGNNNNNCTC 2 cut(s) 738, 770
BpmI CTGGAG 1 cut(s) 406
Bpu10I CCTNAGC 1 cut(s) 1889
BpuEI CTTGAG 3 cut(s) 283, 1105, 1580
BpuMI CCSGG 1 cut(s) 1048
BsaAI YACGTR 1 cut(s) 1337
BsaBI GATNNNNATC 2 cut(s) 1284, 1674
BsaJI CCNNGG 5 cut(s) 553, 621, 659, 1009, 1994
BsaWI WCCGGW 2 cut(s) 1090, 1249
BsaXI ACNNNNNCTCC 2 cut(s) 1410, 1440
Bsc4I CCNNNNNNNGG 5 cut(s) 55, 878, 1015, 1241, 1613
Bse118I RCCGGY 2 cut(s) 370, 701
Bse1I ACTGG 5 cut(s) 389, 496, 988, 1027, 1500
Bse3DI GCAATG 2 cut(s) 131, 1138
Bse8I GATNNNNATC 2 cut(s) 1284, 1674
BseAI TCCGGA 1 cut(s) 1090
BseBI CCWGG 5 cut(s) 907, 1011, 1236, 1371, 1965
BseDI CCNNGG 5 cut(s) 553, 621, 659, 1009, 1994
BseGI GGATG 7 cut(s) 583, 1099, 1120, 1625, 1672, 1682, 1875
BseJI GATNNNNATC 2 cut(s) 1284, 1674
BseLI CCNNNNNNNGG 5 cut(s) 55, 878, 1015, 1241, 1613
BseMI GCAATG 2 cut(s) 131, 1138
BseMII CTCAG 4 cut(s) 504, 660, 1083, 1666
BseNI ACTGG 5 cut(s) 389, 496, 988, 1027, 1500
BseRI GAGGAG 1 cut(s) 188
BseSI GKGCMC 1 cut(s) 994
BseXI GCAGC 7 cut(s) 711, 1069, 1147, 1357, 1447, 1717, 1893
BsgI GTGCAG 3 cut(s) 582, 1311, 1551
Bsh1236I CGCG 1 cut(s) 707
BshFI GGCC 7 cut(s) 318, 426, 570, 664, 1081, 1963, 2046
BshNI GGYRCC 1 cut(s) 991
BsiHKCI CYCGRG 1 cut(s) 734
BsiSI CCGG 5 cut(s) 371, 702, 1047, 1091, 1250
BslI CCNNNNNNNGG 5 cut(s) 55, 878, 1015, 1241, 1613
BsmAI GTCTC 3 cut(s) 95, 714, 1556
BsmBI CGTCTC 1 cut(s) 714
BsmI GAATGC 4 cut(s) 446, 775, 1720, 1852
BsnI GGCC 7 cut(s) 318, 426, 570, 664, 1081, 1963, 2046
BsoBI CYCGRG 1 cut(s) 734
Bsp1286I GDGCHC 1 cut(s) 994
Bsp13I TCCGGA 1 cut(s) 1090
Bsp1407I TGTACA 1 cut(s) 793
Bsp143I GATC 6 cut(s) 418, 678, 751, 952, 1285, 1366
BspACI CCGC 4 cut(s) 59, 453, 1885, 2010
BspANI GGCC 7 cut(s) 318, 426, 570, 664, 1081, 1963, 2046
BspCNI CTCAG 4 cut(s) 505, 661, 1082, 1665
BspEI TCCGGA 1 cut(s) 1090
BspFNI CGCG 1 cut(s) 707
BspLI GGNNCC 3 cut(s) 993, 1029, 1962
BspMAI CTGCAG 1 cut(s) 35
BspMI ACCTGC 1 cut(s) 554
BspPI GGATC 3 cut(s) 426, 673, 1361
BspQI GCTCTTC 2 cut(s) 1446, 1624
BspT107I GGYRCC 1 cut(s) 991
BsrDI GCAATG 2 cut(s) 131, 1138
BsrFI RCCGGY 2 cut(s) 370, 701
BsrGI TGTACA 1 cut(s) 793
BsrI ACTGG 5 cut(s) 389, 496, 988, 1027, 1500
BssAI RCCGGY 2 cut(s) 370, 701
BssECI CCNNGG 5 cut(s) 553, 621, 659, 1009, 1994
BssMI GATC 6 cut(s) 418, 678, 751, 952, 1285, 1366
BssNAI GTATAC 1 cut(s) 151
BssT1I CCWWGG 1 cut(s) 553
Bst1107I GTATAC 1 cut(s) 151
Bst2UI CCWGG 5 cut(s) 907, 1011, 1236, 1371, 1965
Bst4CI ACNGT 8 cut(s) 367, 533, 800, 831, 938, 947, 1217, 1508
Bst6I CTCTTC 4 cut(s) 279, 1446, 1624, 1863
BstAPI GCANNNNNTGC 1 cut(s) 1808
BstAUI TGTACA 1 cut(s) 793
BstBAI YACGTR 1 cut(s) 1337
BstC8I GCNNGC 2 cut(s) 372, 2001
BstDEI CTNAG 7 cut(s) 513, 669, 1069, 1458, 1652, 1690, 1889
BstF5I GGATG 7 cut(s) 583, 1099, 1120, 1625, 1672, 1682, 1875
BstFNI CGCG 1 cut(s) 707
BstH2I RGCGCY 1 cut(s) 181
BstHHI GCGC 3 cut(s) 180, 707, 724
BstKTI GATC 6 cut(s) 421, 681, 754, 955, 1288, 1369
BstMAI GTCTC 3 cut(s) 95, 714, 1556
BstMBI GATC 6 cut(s) 418, 678, 751, 952, 1285, 1366
BstNI CCWGG 5 cut(s) 907, 1011, 1236, 1371, 1965
BstNSI RCATGY 1 cut(s) 2003
BstPAI GACNNNNGTC 1 cut(s) 689
BstSCI CCNGG 6 cut(s) 905, 1009, 1046, 1234, 1369, 1963
BstSFI CTRYAG 2 cut(s) 31, 1032
BstSLI GKGCMC 1 cut(s) 994
BstUI CGCG 1 cut(s) 707
BstV1I GCAGC 7 cut(s) 711, 1069, 1147, 1357, 1447, 1717, 1893
BstV2I GAAGAC 2 cut(s) 60, 1316
BstX2I RGATCY 2 cut(s) 952, 1366
BstYI RGATCY 2 cut(s) 952, 1366
BstZ17I GTATAC 1 cut(s) 151
BsuRI GGCC 7 cut(s) 318, 426, 570, 664, 1081, 1963, 2046
BtgZI GCGATG 1 cut(s) 668
BtsCI GGATG 7 cut(s) 583, 1099, 1120, 1625, 1672, 1682, 1875
BtsI GCAGTG 2 cut(s) 291, 462
BtsIMutI CAGTG 3 cut(s) 291, 462, 1513
BveI ACCTGC 1 cut(s) 554
Cac8I GCNNGC 2 cut(s) 372, 2001
CfoI GCGC 3 cut(s) 180, 707, 724
Cfr10I RCCGGY 2 cut(s) 370, 701
Cfr13I GGNCC 3 cut(s) 46, 316, 1961
CseI GACGC 1 cut(s) 696
Csp6I GTAC 6 cut(s) 118, 794, 801, 832, 1218, 1383
CviAII CATG 8 cut(s) 52, 608, 676, 743, 1386, 1613, 1724, 2000
CviQI GTAC 6 cut(s) 118, 794, 801, 832, 1218, 1383
DdeI CTNAG 7 cut(s) 513, 669, 1069, 1458, 1652, 1690, 1889
DpnI GATC 6 cut(s) 420, 680, 753, 954, 1287, 1368
DpnII GATC 6 cut(s) 418, 678, 751, 952, 1285, 1366
DrdI GACNNNNNNGTC 1 cut(s) 536
DseDI GACNNNNNNGTC 1 cut(s) 536
Eam1104I CTCTTC 4 cut(s) 279, 1446, 1624, 1863
EarI CTCTTC 4 cut(s) 279, 1446, 1624, 1863
Eco130I CCWWGG 1 cut(s) 553
Eco147I AGGCCT 1 cut(s) 1081
Eco47I GGWCC 1 cut(s) 46
Eco47III AGCGCT 1 cut(s) 179
Eco57I CTGAAG 4 cut(s) 1287, 1443, 1466, 1904
Eco88I CYCGRG 1 cut(s) 734
EcoO109I RGGNCCY 1 cut(s) 1961
EcoRII CCWGG 5 cut(s) 905, 1009, 1234, 1369, 1963
EcoT14I CCWWGG 1 cut(s) 553
EcoT22I ATGCAT 3 cut(s) 29, 103, 586
ErhI CCWWGG 1 cut(s) 553
Esp3I CGTCTC 1 cut(s) 714
FaeI CATG 8 cut(s) 55, 611, 679, 746, 1389, 1616, 1727, 2003
FatI CATG 8 cut(s) 51, 607, 675, 742, 1385, 1612, 1723, 1999
FblI GTMKAC 3 cut(s) 150, 549, 815
Fnu4HI GCNGC 9 cut(s) 60, 725, 1058, 1161, 1346, 1436, 1731, 1882, 1885
FokI GGATG 7 cut(s) 590, 1106, 1127, 1612, 1669, 1679, 1882
Fsp4HI GCNGC 9 cut(s) 60, 725, 1058, 1161, 1346, 1436, 1731, 1882, 1885
FspBI CTAG 1 cut(s) 1796
GlaI GCGC 3 cut(s) 179, 706, 723
GluI GCNGC 9 cut(s) 60, 725, 1058, 1161, 1346, 1436, 1731, 1882, 1885
GsuI CTGGAG 1 cut(s) 406
HaeII RGCGCY 1 cut(s) 181
HaeIII GGCC 7 cut(s) 318, 426, 570, 664, 1081, 1963, 2046
HapII CCGG 5 cut(s) 371, 702, 1047, 1091, 1250
HgaI GACGC 1 cut(s) 696
HhaI GCGC 3 cut(s) 180, 707, 724
Hin1II CATG 8 cut(s) 55, 611, 679, 746, 1389, 1616, 1727, 2003
Hin6I GCGC 3 cut(s) 178, 705, 722
HinP1I GCGC 3 cut(s) 178, 705, 722
HincII GTYRAC 2 cut(s) 529, 1759
HindII GTYRAC 2 cut(s) 529, 1759
HindIII AAGCTT 2 cut(s) 1170, 1522
HpaII CCGG 5 cut(s) 371, 702, 1047, 1091, 1250
HphI GGTGA 4 cut(s) 691, 990, 1993, 1999
Hpy188III TCNNGA 8 cut(s) 184, 300, 682, 1071, 1091, 1122, 1265, 1364
Hpy99I CGWCG 1 cut(s) 1899
HpyCH4III ACNGT 8 cut(s) 367, 533, 800, 831, 938, 947, 1217, 1508
HpyCH4IV ACGT 2 cut(s) 690, 1336
HpyF3I CTNAG 7 cut(s) 513, 669, 1069, 1458, 1652, 1690, 1889
HpySE526I ACGT 2 cut(s) 690, 1336
Hsp92II CATG 8 cut(s) 55, 611, 679, 746, 1389, 1616, 1727, 2003
HspAI GCGC 3 cut(s) 178, 705, 722
Kpn2I TCCGGA 1 cut(s) 1090
KroI GCCGGC 1 cut(s) 370
KroNI GCCGGC 1 cut(s) 372
Kzo9I GATC 6 cut(s) 418, 678, 751, 952, 1285, 1366
LguI GCTCTTC 2 cut(s) 1446, 1624
LmnI GCTCC 5 cut(s) 175, 398, 461, 826, 1418
Lsp1109I GCAGC 7 cut(s) 711, 1069, 1147, 1357, 1447, 1717, 1893
MaeI CTAG 1 cut(s) 1796
MaeII ACGT 2 cut(s) 690, 1336
MaeIII GTNAC 4 cut(s) 403, 941, 1018, 1852
MalI GATC 6 cut(s) 420, 680, 753, 954, 1287, 1368
MboI GATC 6 cut(s) 418, 678, 751, 952, 1285, 1366
MfeI CAATTG 1 cut(s) 1646
MflI RGATCY 2 cut(s) 952, 1366
MhlI GDGCHC 1 cut(s) 994
MlyI GAGTC 2 cut(s) 262, 1849
MmeI TCCRAC 1 cut(s) 246
Mph1103I ATGCAT 3 cut(s) 29, 103, 586
MroI TCCGGA 1 cut(s) 1090
MroNI GCCGGC 1 cut(s) 370
MroXI GAANNNNTTC 1 cut(s) 1152
MseI TTAA 4 cut(s) 615, 980, 2027, 2086
MslI CAYNNNNRTG 1 cut(s) 1509
MspA1I CMGCKG 1 cut(s) 1348
MspI CCGG 5 cut(s) 371, 702, 1047, 1091, 1250
MspR9I CCNGG 6 cut(s) 907, 1011, 1048, 1236, 1371, 1965
MunI CAATTG 1 cut(s) 1646
Mva1269I GAATGC 4 cut(s) 446, 775, 1720, 1852
MvaI CCWGG 5 cut(s) 907, 1011, 1236, 1371, 1965
MvnI CGCG 1 cut(s) 707
NaeI GCCGGC 1 cut(s) 372
NciI CCSGG 1 cut(s) 1048
NdeII GATC 6 cut(s) 418, 678, 751, 952, 1285, 1366
NgoMIV GCCGGC 1 cut(s) 370
NlaIII CATG 8 cut(s) 55, 611, 679, 746, 1389, 1616, 1727, 2003
NlaIV GGNNCC 3 cut(s) 993, 1029, 1962
NmeAIII GCCGAG 2 cut(s) 684, 1975
NmuCI GTSAC 1 cut(s) 1852
NsiI ATGCAT 3 cut(s) 29, 103, 586
NspI RCATGY 1 cut(s) 2003
PaeI GCATGC 1 cut(s) 2003
PaeR7I CTCGAG 1 cut(s) 734
PaqCI CACCTGC 1 cut(s) 554
PceI AGGCCT 1 cut(s) 1081
PciSI GCTCTTC 2 cut(s) 1446, 1624
PcsI WCGNNNNNNNCGW 1 cut(s) 142
PctI GAATGC 4 cut(s) 446, 775, 1720, 1852
PdiI GCCGGC 1 cut(s) 372
PdmI GAANNNNTTC 1 cut(s) 1152
PfeI GAWTC 8 cut(s) 215, 259, 309, 474, 859, 1153, 1360, 1767
PfoI TCCNGGA 1 cut(s) 1369
PkrI GCNGC 9 cut(s) 61, 726, 1059, 1162, 1347, 1437, 1732, 1883, 1886
PleI GAGTC 2 cut(s) 261, 1849
PpsI GAGTC 2 cut(s) 261, 1849
Ppu21I YACGTR 1 cut(s) 1337
PshAI GACNNNNGTC 1 cut(s) 689
PshBI ATTAAT 1 cut(s) 615
Psp6I CCWGG 5 cut(s) 905, 1009, 1234, 1369, 1963
PspGI CCWGG 5 cut(s) 905, 1009, 1234, 1369, 1963
PspN4I GGNNCC 3 cut(s) 993, 1029, 1962
PspPI GGNCC 3 cut(s) 46, 316, 1961
PspXI VCTCGAGB 1 cut(s) 734
PsrI GAACNNNNNNTAC 2 cut(s) 1011, 1043
PstI CTGCAG 1 cut(s) 35
PsuI RGATCY 2 cut(s) 952, 1366
PvuII CAGCTG 1 cut(s) 1348
RsaI GTAC 6 cut(s) 119, 795, 802, 833, 1219, 1384
RsaNI GTAC 6 cut(s) 118, 794, 801, 832, 1218, 1383
RseI CAYNNNNRTG 1 cut(s) 1509
SapI GCTCTTC 2 cut(s) 1446, 1624
SaqAI TTAA 4 cut(s) 615, 980, 2027, 2086
SatI GCNGC 9 cut(s) 60, 725, 1058, 1161, 1346, 1436, 1731, 1882, 1885
Sau3AI GATC 6 cut(s) 418, 678, 751, 952, 1285, 1366
Sau96I GGNCC 3 cut(s) 46, 316, 1961
ScaI AGTACT 1 cut(s) 1219
SchI GAGTC 2 cut(s) 262, 1849
ScrFI CCNGG 6 cut(s) 907, 1011, 1048, 1236, 1371, 1965
SduI GDGCHC 1 cut(s) 994
SfcI CTRYAG 2 cut(s) 31, 1032
Sfr274I CTCGAG 1 cut(s) 734
SgrAI CRCCGGYG 1 cut(s) 701
SinI GGWCC 1 cut(s) 46
SlaI CTCGAG 1 cut(s) 734
SmiMI CAYNNNNRTG 1 cut(s) 1509
SmlI CTYRAG 4 cut(s) 298, 734, 1120, 1559
SmoI CTYRAG 4 cut(s) 298, 734, 1120, 1559
SphI GCATGC 1 cut(s) 2003
SseBI AGGCCT 1 cut(s) 1081
SsiI CCGC 4 cut(s) 59, 453, 1885, 2010
SspMI CTAG 1 cut(s) 1796
StuI AGGCCT 1 cut(s) 1081
StyD4I CCNGG 6 cut(s) 905, 1009, 1046, 1234, 1369, 1963
StyI CCWWGG 1 cut(s) 553
TaaI ACNGT 8 cut(s) 367, 533, 800, 831, 938, 947, 1217, 1508
TaiI ACGT 2 cut(s) 693, 1339
TaqI TCGA 3 cut(s) 648, 735, 1770
TatI WGTACW 5 cut(s) 793, 800, 831, 1217, 1382
TauI GCSGC 2 cut(s) 62, 1887
TfiI GAWTC 8 cut(s) 215, 259, 309, 474, 859, 1153, 1360, 1767
Tru1I TTAA 4 cut(s) 615, 980, 2027, 2086
Tru9I TTAA 4 cut(s) 615, 980, 2027, 2086
TscAI CASTG 3 cut(s) 298, 462, 1513
TseFI GTSAC 1 cut(s) 1852
TseI GCWGC 7 cut(s) 724, 1057, 1160, 1345, 1435, 1730, 1881
Tsp45I GTSAC 1 cut(s) 1852
TspDTI ATGAA 7 cut(s) 297, 369, 774, 912, 1727, 1740, 1927
TspRI CASTG 3 cut(s) 298, 462, 1513
VpaK11BI GGWCC 1 cut(s) 46
VspI ATTAAT 1 cut(s) 615
XapI RAATTY 4 cut(s) 358, 1260, 1273, 1781
XceI RCATGY 1 cut(s) 2003
XhoI CTCGAG 1 cut(s) 734
XmiI GTMKAC 3 cut(s) 150, 549, 815
XmnI GAANNNNTTC 1 cut(s) 1152
XspI CTAG 1 cut(s) 1796
ZrmI AGTACT 1 cut(s) 1219
Zsp2I ATGCAT 3 cut(s) 29, 103, 586
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.