UBA-like domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 400 |
| AccB1I | GGYRCC | 1 cut(s) | 400 |
| AccBSI | CCGCTC | 2 cut(s) | 398, 1037 |
| AccII | CGCG | 2 cut(s) | 53, 68 |
| AciI | CCGC | 6 cut(s) | 230, 269, 398, 891, 1035, 1306 |
| AclWI | GGATC | 4 cut(s) | 323, 992, 1005, 1175 |
| AcoI | YGGCCR | 1 cut(s) | 199 |
| AcsI | RAATTY | 2 cut(s) | 630, 991 |
| AcuI | CTGAAG | 4 cut(s) | 698, 836, 900, 1313 |
| AfaI | GTAC | 3 cut(s) | 35, 402, 754 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 208, 611, 1019 |
| AflIII | ACRYGT | 1 cut(s) | 30 |
| AgsI | TTSAA | 2 cut(s) | 543, 829 |
| AjnI | CCWGG | 3 cut(s) | 391, 403, 1372 |
| AluBI | AGCT | 6 cut(s) | 79, 527, 910, 920, 1327, 1475 |
| AluI | AGCT | 6 cut(s) | 79, 527, 910, 920, 1327, 1475 |
| Alw21I | GWGCWC | 2 cut(s) | 253, 376 |
| Alw26I | GTCTC | 4 cut(s) | 60, 135, 353, 606 |
| Alw44I | GTGCAC | 1 cut(s) | 372 |
| AlwI | GGATC | 4 cut(s) | 323, 992, 1005, 1175 |
| Ama87I | CYCGRG | 1 cut(s) | 1193 |
| AoxI | GGCC | 4 cut(s) | 199, 311, 461, 1021 |
| ApaLI | GTGCAC | 1 cut(s) | 372 |
| ApeKI | GCWGC | 5 cut(s) | 164, 296, 527, 1009, 1208 |
| ApoI | RAATTY | 2 cut(s) | 630, 991 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 143, 175, 352, 384 |
| AseI | ATTAAT | 1 cut(s) | 380 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 519 |
| Asp718I | GGTACC | 1 cut(s) | 400 |
| AspLEI | GCGC | 2 cut(s) | 53, 70 |
| AspS9I | GGNCC | 4 cut(s) | 281, 312, 980, 1022 |
| AsuHPI | GGTGA | 5 cut(s) | 37, 626, 959, 1402, 1436 |
| AsuII | TTCGAA | 1 cut(s) | 73 |
| AvaI | CYCGRG | 1 cut(s) | 1193 |
| AvaII | GGWCC | 2 cut(s) | 281, 980 |
| BaeGI | GKGCMC | 1 cut(s) | 376 |
| BalI | TGGCCA | 1 cut(s) | 201 |
| BamHI | GGATCC | 1 cut(s) | 997 |
| BanI | GGYRCC | 1 cut(s) | 400 |
| BanII | GRGCYC | 1 cut(s) | 592 |
| BbsI | GAAGAC | 1 cut(s) | 686 |
| Bbv12I | GWGCWC | 2 cut(s) | 253, 376 |
| BbvI | GCAGC | 5 cut(s) | 151, 283, 514, 1021, 1195 |
| BccI | CCATC | 3 cut(s) | 191, 779, 785 |
| BceAI | ACGGC | 1 cut(s) | 95 |
| BciT130I | CCWGG | 3 cut(s) | 393, 405, 1374 |
| BclI | TGATCA | 2 cut(s) | 436, 1249 |
| BcoDI | GTCTC | 4 cut(s) | 60, 135, 353, 606 |
| BfaI | CTAG | 2 cut(s) | 300, 638 |
| BfmI | CTRYAG | 1 cut(s) | 798 |
| BisI | GCNGC | 7 cut(s) | 165, 297, 528, 892, 1010, 1209, 1306 |
| BlsI | GCNGC | 7 cut(s) | 166, 298, 529, 893, 1011, 1210, 1307 |
| Bme1390I | CCNGG | 3 cut(s) | 393, 405, 1374 |
| Bme18I | GGWCC | 2 cut(s) | 281, 980 |
| BmeT110I | CYCGRG | 1 cut(s) | 1193 |
| BmgT120I | GGNCC | 4 cut(s) | 281, 312, 980, 1022 |
| BmiI | GGNNCC | 3 cut(s) | 402, 411, 999 |
| BmrFI | CCNGG | 3 cut(s) | 393, 405, 1374 |
| BmrI | ACTGGG | 1 cut(s) | 169 |
| BmsI | GCATC | 4 cut(s) | 51, 541, 1097, 1269 |
| BmuI | ACTGGG | 1 cut(s) | 169 |
| BpiI | GAAGAC | 1 cut(s) | 686 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 30, 84, 116 |
| BpmI | CTGGAG | 1 cut(s) | 101 |
| Bpu14I | TTCGAA | 1 cut(s) | 73 |
| BpuEI | CTTGAG | 1 cut(s) | 950 |
| BsaAI | YACGTR | 1 cut(s) | 33 |
| BsaBI | GATNNNNATC | 2 cut(s) | 654, 729 |
| BsaI | GGTCTC | 1 cut(s) | 353 |
| BsaJI | CCNNGG | 2 cut(s) | 404, 1403 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 208, 611, 1019 |
| Bse118I | RCCGGY | 1 cut(s) | 47 |
| Bse1I | ACTGG | 2 cut(s) | 175, 370 |
| Bse3DI | GCAATG | 1 cut(s) | 708 |
| Bse8I | GATNNNNATC | 2 cut(s) | 654, 729 |
| BseBI | CCWGG | 3 cut(s) | 393, 405, 1374 |
| BseDI | CCNNGG | 2 cut(s) | 404, 1403 |
| BseGI | GGATG | 5 cut(s) | 202, 1031, 1088, 1162, 1284 |
| BseJI | GATNNNNATC | 2 cut(s) | 654, 729 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 208, 611, 1019 |
| BseMI | GCAATG | 1 cut(s) | 708 |
| BseMII | CTCAG | 4 cut(s) | 29, 115, 266, 465 |
| BseNI | ACTGG | 2 cut(s) | 175, 370 |
| BseRI | GAGGAG | 1 cut(s) | 524 |
| BseSI | GKGCMC | 1 cut(s) | 376 |
| BseXI | GCAGC | 5 cut(s) | 151, 283, 514, 1021, 1195 |
| BsgI | GTGCAG | 1 cut(s) | 681 |
| Bsh1236I | CGCG | 2 cut(s) | 53, 68 |
| BshFI | GGCC | 4 cut(s) | 201, 313, 463, 1023 |
| BshNI | GGYRCC | 1 cut(s) | 400 |
| BsiHKAI | GWGCWC | 2 cut(s) | 253, 376 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1193 |
| BsiSI | CCGG | 1 cut(s) | 48 |
| BslFI | GGGAC | 1 cut(s) | 658 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 208, 611, 1019 |
| BsmAI | GTCTC | 4 cut(s) | 60, 135, 353, 606 |
| BsmBI | CGTCTC | 1 cut(s) | 60 |
| BsmFI | GGGAC | 1 cut(s) | 658 |
| BsmI | GAATGC | 3 cut(s) | 121, 940, 1261 |
| BsnI | GGCC | 4 cut(s) | 201, 313, 463, 1023 |
| Bso31I | GGTCTC | 1 cut(s) | 353 |
| BsoBI | CYCGRG | 1 cut(s) | 1193 |
| Bsp119I | TTCGAA | 1 cut(s) | 73 |
| Bsp1286I | GDGCHC | 3 cut(s) | 253, 376, 592 |
| Bsp143I | GATC | 7 cut(s) | 24, 328, 436, 655, 997, 1180, 1249 |
| BspACI | CCGC | 6 cut(s) | 230, 269, 398, 891, 1035, 1306 |
| BspANI | GGCC | 4 cut(s) | 201, 313, 463, 1023 |
| BspCNI | CTCAG | 4 cut(s) | 28, 114, 265, 464 |
| BspFNI | CGCG | 2 cut(s) | 53, 68 |
| BspLI | GGNNCC | 3 cut(s) | 402, 411, 999 |
| BspPI | GGATC | 4 cut(s) | 323, 992, 1005, 1175 |
| BspT104I | TTCGAA | 1 cut(s) | 73 |
| BspT107I | GGYRCC | 1 cut(s) | 400 |
| BspTNI | GGTCTC | 1 cut(s) | 353 |
| BsrBI | CCGCTC | 2 cut(s) | 398, 1037 |
| BsrDI | GCAATG | 1 cut(s) | 708 |
| BsrFI | RCCGGY | 1 cut(s) | 47 |
| BsrI | ACTGG | 2 cut(s) | 175, 370 |
| BssAI | RCCGGY | 1 cut(s) | 47 |
| BssECI | CCNNGG | 2 cut(s) | 404, 1403 |
| BssMI | GATC | 7 cut(s) | 24, 328, 436, 655, 997, 1180, 1249 |
| Bst2UI | CCWGG | 3 cut(s) | 393, 405, 1374 |
| Bst4CI | ACNGT | 4 cut(s) | 341, 672, 799, 1420 |
| Bst6I | CTCTTC | 2 cut(s) | 876, 1272 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 221 |
| BstBAI | YACGTR | 1 cut(s) | 33 |
| BstBI | TTCGAA | 1 cut(s) | 73 |
| BstC8I | GCNNGC | 2 cut(s) | 1206, 1410 |
| BstDEI | CTNAG | 6 cut(s) | 15, 101, 252, 451, 1058, 1298 |
| BstEII | GGTNACC | 1 cut(s) | 860 |
| BstF5I | GGATG | 5 cut(s) | 202, 1031, 1088, 1162, 1284 |
| BstFNI | CGCG | 2 cut(s) | 53, 68 |
| BstHHI | GCGC | 2 cut(s) | 53, 70 |
| BstKTI | GATC | 7 cut(s) | 27, 331, 439, 658, 1000, 1183, 1252 |
| BstMAI | GTCTC | 4 cut(s) | 60, 135, 353, 606 |
| BstMBI | GATC | 7 cut(s) | 24, 328, 436, 655, 997, 1180, 1249 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 48, 76, 116, 221, 536, 560, 1217, 1302 |
| BstNI | CCWGG | 3 cut(s) | 393, 405, 1374 |
| BstNSI | RCATGY | 1 cut(s) | 224 |
| BstPI | GGTNACC | 1 cut(s) | 860 |
| BstSCI | CCNGG | 3 cut(s) | 391, 403, 1372 |
| BstSFI | CTRYAG | 1 cut(s) | 798 |
| BstSLI | GKGCMC | 1 cut(s) | 376 |
| BstUI | CGCG | 2 cut(s) | 53, 68 |
| BstV1I | GCAGC | 5 cut(s) | 151, 283, 514, 1021, 1195 |
| BstV2I | GAAGAC | 1 cut(s) | 686 |
| BstX2I | RGATCY | 1 cut(s) | 997 |
| BstYI | RGATCY | 1 cut(s) | 997 |
| BsuRI | GGCC | 4 cut(s) | 201, 313, 463, 1023 |
| BtsCI | GGATG | 5 cut(s) | 202, 1031, 1088, 1162, 1284 |
| BtsIMutI | CAGTG | 1 cut(s) | 668 |
| Cac8I | GCNNGC | 2 cut(s) | 1206, 1410 |
| CfoI | GCGC | 2 cut(s) | 53, 70 |
| Cfr10I | RCCGGY | 1 cut(s) | 47 |
| Cfr13I | GGNCC | 4 cut(s) | 281, 312, 980, 1022 |
| CseI | GACGC | 1 cut(s) | 42 |
| Csp6I | GTAC | 3 cut(s) | 34, 401, 753 |
| CviAII | CATG | 7 cut(s) | 22, 37, 221, 478, 494, 833, 1019 |
| CviQI | GTAC | 3 cut(s) | 34, 401, 753 |
| DdeI | CTNAG | 6 cut(s) | 15, 101, 252, 451, 1058, 1298 |
| DpnI | GATC | 7 cut(s) | 26, 330, 438, 657, 999, 1182, 1251 |
| DpnII | GATC | 7 cut(s) | 24, 328, 436, 655, 997, 1180, 1249 |
| EaeI | YGGCCR | 1 cut(s) | 199 |
| Eam1104I | CTCTTC | 2 cut(s) | 876, 1272 |
| EarI | CTCTTC | 2 cut(s) | 876, 1272 |
| Eco147I | AGGCCT | 1 cut(s) | 463 |
| Eco24I | GRGCYC | 1 cut(s) | 592 |
| Eco31I | GGTCTC | 1 cut(s) | 353 |
| Eco47I | GGWCC | 2 cut(s) | 281, 980 |
| Eco57I | CTGAAG | 4 cut(s) | 698, 836, 900, 1313 |
| Eco88I | CYCGRG | 1 cut(s) | 1193 |
| Eco91I | GGTNACC | 1 cut(s) | 860 |
| EcoO109I | RGGNCCY | 1 cut(s) | 312 |
| EcoO65I | GGTNACC | 1 cut(s) | 860 |
| EcoRII | CCWGG | 3 cut(s) | 391, 403, 1372 |
| EcoT38I | GRGCYC | 1 cut(s) | 592 |
| Esp3I | CGTCTC | 1 cut(s) | 60 |
| FaeI | CATG | 7 cut(s) | 25, 40, 224, 481, 497, 836, 1022 |
| FaqI | GGGAC | 1 cut(s) | 658 |
| FatI | CATG | 7 cut(s) | 21, 36, 220, 477, 493, 832, 1018 |
| FauI | CCCGC | 1 cut(s) | 237 |
| FauNDI | CATATG | 2 cut(s) | 192, 958 |
| FbaI | TGATCA | 2 cut(s) | 436, 1249 |
| Fnu4HI | GCNGC | 7 cut(s) | 165, 297, 528, 892, 1010, 1209, 1306 |
| FokI | GGATG | 5 cut(s) | 209, 1018, 1075, 1169, 1291 |
| FriOI | GRGCYC | 1 cut(s) | 592 |
| Fsp4HI | GCNGC | 7 cut(s) | 165, 297, 528, 892, 1010, 1209, 1306 |
| FspBI | CTAG | 2 cut(s) | 300, 638 |
| GlaI | GCGC | 2 cut(s) | 52, 69 |
| GluI | GCNGC | 7 cut(s) | 165, 297, 528, 892, 1010, 1209, 1306 |
| GsuI | CTGGAG | 1 cut(s) | 101 |
| HaeIII | GGCC | 4 cut(s) | 201, 313, 463, 1023 |
| HapII | CCGG | 1 cut(s) | 48 |
| HgaI | GACGC | 1 cut(s) | 42 |
| HhaI | GCGC | 2 cut(s) | 53, 70 |
| Hin1II | CATG | 7 cut(s) | 25, 40, 224, 481, 497, 836, 1022 |
| Hin6I | GCGC | 2 cut(s) | 51, 68 |
| HinP1I | GCGC | 2 cut(s) | 51, 68 |
| HindIII | AAGCTT | 1 cut(s) | 1325 |
| HinfI | GANTC | 9 cut(s) | 7, 205, 256, 520, 730, 817, 836, 950, 1264 |
| HpaII | CCGG | 1 cut(s) | 48 |
| HphI | GGTGA | 5 cut(s) | 37, 626, 959, 1402, 1436 |
| Hpy166II | GTNNAC | 3 cut(s) | 374, 1235, 1448 |
| Hpy188I | TCNGA | 6 cut(s) | 255, 573, 880, 1168, 1254, 1321 |
| Hpy188III | TCNNGA | 7 cut(s) | 17, 453, 473, 620, 821, 1195, 1484 |
| Hpy8I | GTNNAC | 3 cut(s) | 374, 1235, 1448 |
| HpyAV | CCTTC | 1 cut(s) | 1035 |
| HpyCH4III | ACNGT | 4 cut(s) | 341, 672, 799, 1420 |
| HpyCH4IV | ACGT | 1 cut(s) | 32 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 48, 76, 116, 221, 536, 560, 1217, 1302 |
| HpyF3I | CTNAG | 6 cut(s) | 15, 101, 252, 451, 1058, 1298 |
| HpySE526I | ACGT | 1 cut(s) | 32 |
| Hsp92II | CATG | 7 cut(s) | 25, 40, 224, 481, 497, 836, 1022 |
| HspAI | GCGC | 2 cut(s) | 51, 68 |
| KpnI | GGTACC | 1 cut(s) | 404 |
| Ksp22I | TGATCA | 2 cut(s) | 436, 1249 |
| Kzo9I | GATC | 7 cut(s) | 24, 328, 436, 655, 997, 1180, 1249 |
| LmnI | GCTCC | 1 cut(s) | 395 |
| Lsp1109I | GCAGC | 5 cut(s) | 151, 283, 514, 1021, 1195 |
| LweI | GCATC | 4 cut(s) | 51, 541, 1097, 1269 |
| MaeI | CTAG | 2 cut(s) | 300, 638 |
| MaeII | ACGT | 1 cut(s) | 32 |
| MaeIII | GTNAC | 6 cut(s) | 318, 842, 860, 1145, 1261, 1424 |
| MalI | GATC | 7 cut(s) | 26, 330, 438, 657, 999, 1182, 1251 |
| MbiI | CCGCTC | 2 cut(s) | 398, 1037 |
| MboI | GATC | 7 cut(s) | 24, 328, 436, 655, 997, 1180, 1249 |
| MboII | GAAGA | 6 cut(s) | 560, 691, 842, 891, 893, 1259 |
| MfeI | CAATTG | 1 cut(s) | 1052 |
| MflI | RGATCY | 1 cut(s) | 997 |
| MhlI | GDGCHC | 3 cut(s) | 253, 376, 592 |
| MlsI | TGGCCA | 1 cut(s) | 201 |
| MluNI | TGGCCA | 1 cut(s) | 201 |
| MlyI | GAGTC | 3 cut(s) | 16, 826, 1258 |
| MmeI | TCCRAC | 2 cut(s) | 35, 1117 |
| Mox20I | TGGCCA | 1 cut(s) | 201 |
| MroXI | GAANNNNTTC | 1 cut(s) | 519 |
| MscI | TGGCCA | 1 cut(s) | 201 |
| MseI | TTAA | 8 cut(s) | 354, 380, 423, 609, 1128, 1311, 1368, 1442 |
| MslI | CAYNNNNRTG | 5 cut(s) | 35, 195, 498, 760, 783 |
| Msp20I | TGGCCA | 1 cut(s) | 201 |
| MspI | CCGG | 1 cut(s) | 48 |
| MspR9I | CCNGG | 3 cut(s) | 393, 405, 1374 |
| MunI | CAATTG | 1 cut(s) | 1052 |
| Mva1269I | GAATGC | 3 cut(s) | 121, 940, 1261 |
| MvaI | CCWGG | 3 cut(s) | 393, 405, 1374 |
| MvnI | CGCG | 2 cut(s) | 53, 68 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 48, 76, 116, 221, 536, 560, 1217, 1302 |
| NdeI | CATATG | 2 cut(s) | 192, 958 |
| NdeII | GATC | 7 cut(s) | 24, 328, 436, 655, 997, 1180, 1249 |
| NlaIII | CATG | 7 cut(s) | 25, 40, 224, 481, 497, 836, 1022 |
| NlaIV | GGNNCC | 3 cut(s) | 402, 411, 999 |
| NmeAIII | GCCGAG | 1 cut(s) | 1384 |
| NmuCI | GTSAC | 3 cut(s) | 1145, 1261, 1424 |
| NspI | RCATGY | 1 cut(s) | 224 |
| NspV | TTCGAA | 1 cut(s) | 73 |
| PaeR7I | CTCGAG | 1 cut(s) | 1193 |
| PceI | AGGCCT | 1 cut(s) | 463 |
| PctI | GAATGC | 3 cut(s) | 121, 940, 1261 |
| PdmI | GAANNNNTTC | 1 cut(s) | 519 |
| PfeI | GAWTC | 6 cut(s) | 205, 256, 520, 730, 836, 950 |
| PkrI | GCNGC | 7 cut(s) | 166, 298, 529, 893, 1011, 1210, 1307 |
| PleI | GAGTC | 3 cut(s) | 15, 825, 1258 |
| PpsI | GAGTC | 3 cut(s) | 15, 825, 1258 |
| Ppu21I | YACGTR | 1 cut(s) | 33 |
| PshBI | ATTAAT | 1 cut(s) | 380 |
| Psp6I | CCWGG | 3 cut(s) | 391, 403, 1372 |
| PspEI | GGTNACC | 1 cut(s) | 860 |
| PspGI | CCWGG | 3 cut(s) | 391, 403, 1372 |
| PspN4I | GGNNCC | 3 cut(s) | 402, 411, 999 |
| PspPI | GGNCC | 4 cut(s) | 281, 312, 980, 1022 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 393, 425, 736, 768 |
| PsuI | RGATCY | 1 cut(s) | 997 |
| RsaI | GTAC | 3 cut(s) | 35, 402, 754 |
| RsaNI | GTAC | 3 cut(s) | 34, 401, 753 |
| RseI | CAYNNNNRTG | 5 cut(s) | 35, 195, 498, 760, 783 |
| SaqAI | TTAA | 8 cut(s) | 354, 380, 423, 609, 1128, 1311, 1368, 1442 |
| SatI | GCNGC | 7 cut(s) | 165, 297, 528, 892, 1010, 1209, 1306 |
| Sau3AI | GATC | 7 cut(s) | 24, 328, 436, 655, 997, 1180, 1249 |
| Sau96I | GGNCC | 4 cut(s) | 281, 312, 980, 1022 |
| SchI | GAGTC | 3 cut(s) | 16, 826, 1258 |
| ScrFI | CCNGG | 3 cut(s) | 393, 405, 1374 |
| SduI | GDGCHC | 3 cut(s) | 253, 376, 592 |
| SfaNI | GCATC | 4 cut(s) | 51, 541, 1097, 1269 |
| SfcI | CTRYAG | 1 cut(s) | 798 |
| Sfr274I | CTCGAG | 1 cut(s) | 1193 |
| SfuI | TTCGAA | 1 cut(s) | 73 |
| SgrAI | CRCCGGYG | 1 cut(s) | 47 |
| SinI | GGWCC | 2 cut(s) | 281, 980 |
| SlaI | CTCGAG | 1 cut(s) | 1193 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 35, 195, 498, 760, 783 |
| SmlI | CTYRAG | 2 cut(s) | 929, 1193 |
| SmoI | CTYRAG | 2 cut(s) | 929, 1193 |
| SseBI | AGGCCT | 1 cut(s) | 463 |
| SsiI | CCGC | 6 cut(s) | 230, 269, 398, 891, 1035, 1306 |
| SspMI | CTAG | 2 cut(s) | 300, 638 |
| StuI | AGGCCT | 1 cut(s) | 463 |
| StyD4I | CCNGG | 3 cut(s) | 391, 403, 1372 |
| TaaI | ACNGT | 4 cut(s) | 341, 672, 799, 1420 |
| TaiI | ACGT | 1 cut(s) | 35 |
| TaqI | TCGA | 6 cut(s) | 27, 73, 358, 523, 1194, 1341 |
| TatI | WGTACW | 1 cut(s) | 752 |
| TauI | GCSGC | 2 cut(s) | 894, 1308 |
| TfiI | GAWTC | 6 cut(s) | 205, 256, 520, 730, 836, 950 |
| Tru1I | TTAA | 8 cut(s) | 354, 380, 423, 609, 1128, 1311, 1368, 1442 |
| Tru9I | TTAA | 8 cut(s) | 354, 380, 423, 609, 1128, 1311, 1368, 1442 |
| TscAI | CASTG | 1 cut(s) | 675 |
| TseFI | GTSAC | 3 cut(s) | 1145, 1261, 1424 |
| TseI | GCWGC | 5 cut(s) | 164, 296, 527, 1009, 1208 |
| Tsp45I | GTSAC | 3 cut(s) | 1145, 1261, 1424 |
| TspDTI | ATGAA | 6 cut(s) | 734, 1007, 1017, 1133, 1146, 1336 |
| TspGWI | ACGGA | 1 cut(s) | 105 |
| TspRI | CASTG | 1 cut(s) | 675 |
| VneI | GTGCAC | 1 cut(s) | 372 |
| VpaK11BI | GGWCC | 2 cut(s) | 281, 980 |
| VspI | ATTAAT | 1 cut(s) | 380 |
| XapI | RAATTY | 2 cut(s) | 630, 991 |
| XceI | RCATGY | 1 cut(s) | 224 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 788 |
| XhoI | CTCGAG | 1 cut(s) | 1193 |
| XmnI | GAANNNNTTC | 1 cut(s) | 519 |
| XspI | CTAG | 2 cut(s) | 300, 638 |