MD08G1210600.v1.1

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Forward (+)
27415820 .. 27417419
1600 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1210600.v1.1.491

Sequence Viewer

Length: 1356 bp
ATGAGAGAGTGCATTTCTATCCACATCGGGCAAGCCGGAATCCAAGTCGGCAACGCCTGCTGGGAGCTCTACTGCCTCGAGCACGGCATTGGCCCCGATGGCCAGATGCCCAGCGACAAGACCGTCGGCCGCGGCGATGACGCCTTCAACACCTTCTTCTCCGAGACCGGTGCCGGAAAGCACGTCCCCCGCGCCATCTTCGTCGATCTGGAGCCCACCGTCATCGACGAGGTCCGCACCGGCACCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATTTCCGGCAAGGAAGACGCTGCCAACAACTTCGCCCGTGGTCACTACACCATCGGCAAAGAGATCGTGGATCTCTGCCTGGACCGCATCAGGAAGCTCGCTGACAACTGCACTGGGCTTCAAGGGTTCTTGGTCTTCAATGCCGTCGGTGGCGGTACCGGATCGGGTCTTGGATCATTGCTTCTGGAGCGGCTTTCGGTTGATTACGGAAAGAAATCCAAGCTGGGATTCACTGTGTACCCTTCTCCTCAGGTTTCTACATCTGTTGTGGAGCCTTACAACAGTGTTCTCTCCACCCATTCTCTGCTGGAGCACACCGACGTGTCTGTGTTGCTCGACAATGAGGCCATCTACGACATCTGCCGCAGGTCCCTCGACATCGAGCGTCCCACCTACACCAATCTGAATCGCCTCGTCTCTCAGGTCATTTCTTCGCTGACAGCGTCGTTGAGGTTCGACGGAGCTCTGAATGTGGATGTGACCGAGTTCCAGACTAACTTGGTTCCATACCCCAGGATCCATTTTATGCTTTCCTCGTATGCTCCTGTGATCTCCGCTGAGAAGGCGTACCACGAGCAGCTCTCTGTGGCTGAGATCACCAACAGTGCGTTTGAGCCTGCCTCCATGATGGCCAAGTGCGATCCCCGCCATGGCAAGTACATGGCCTGCTGCTTGATGTACCGTGGTGATGTCGTTCCCAAGGATGTGAATGCCGCTGTGGCCACCATCAAGACCAAGAGGACAATCCAGTTTGTGGATTGGTGCCCTACCGGGTTCAAGTGCGGTATCAATTACCAGCCACCAACTGTTGTTCCCGGCGGTGACCTTGCCAAGGTGCAGAGGGCTGTTTGCATGATCTCCAACTCCACCAGTGTTGCTGAGGTGTTCTCTCGCATTGATCACAAGTTTGATCTGATGTACGCCAAGCGTGCTTTCGTGCATTGGTACGTGGGTGAGGGCATGGAGGAAGGAGAGTTCTCAGAGGCTCGTGAGGATCTTGCTGCTCTGGAGAAGGATTATGAGGAGGTTGGTGCCGAGTCTGCCGAGGGAGATGACGGTGACGAGGGTGATGACTACTGA

Protein Analysis

452

Amino Acids

49.64

Weight (kDa)

4.96

Isoelectric Point (pI)

34.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tubulin PF00091 3 - 213 8.3e-63 Tubulin/FtsZ family, GTPase domain
Tubulin_C PF03953 263 - 392 8e-52 Tubulin C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000549)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04820 AT1G50010 AT4G14960 AT4G14960
fragaria_vesca FvH4_1g18660 FvH4_2g03140 FvH4_5g33560 FvH4_6g48940 FvH4_6g48940
malus_domestica MD02G1204800.v1.1 MD05G1106800.v1.1 MD08G1210600.v1.1 MD09G1049500.v1.1 MD10G1111600.v1.1 MD15G1398700.v1.1 MD17G1049700.v1.1
prunus_persica Prupe.1G542600_v2.0.a1 Prupe.3G269300_v2.0.a1 Prupe.6G212700_v2.0.a1 Prupe.8G150900_v2.0.a1
pyrus_communis pycom05g10370 pycom08g18150 pycom10g09640 pycom10g09660 pycom111g04050 pycom15g35470 pycom17g04460
rosa_chinensis RchiOBHm_Chr2g0109481 RchiOBHm_Chr2g0168751 RchiOBHm_Chr3g0453071 RchiOBHm_Chr3g0460741 RchiOBHm_Chr3g0467971 RchiOBHm_Chr4g0400901 RchiOBHm_Chr6g0248011 RchiOBHm_Chr7g0232381 RchiOBHm_Chr7g0238121
rosa_laevigata RLG00000001350 RLG00000009167 RLG00000015163 RLG00000017708 RLG00000017741 RLG00000021807 RLG00000023849 RLG00000026518
rosa_multiflora Rmu_sc0000332.1_g000021 Rmu_sc0000332.1_g000029 Rmu_sc0002416.1_g000007 Rmu_sc0002611.1_g000001 Rmu_sc0003113.1_g000016 Rmu_sc0004780.1_g000001 Rmu_sc0004805.1_g000035 Rmu_sc0010633.1_g000010 Rmu_sc0011069.1_g000003 Rmu_sc0016170.1_g000002 Rmu_sc0025757.1_g000003 Rmu_ssc0000484.1_g000003
rosa_roxburghii Rroxscaffold_2G00134200 Rroxscaffold_4G00321030 Rroxscaffold_7G00213500
rosa_rugosa Rorug01G0283100 Rorug02G0160500 Rorug02G0535300 Rorug04G0027000 Rorug04G0328100 Rorug05G0388700 Rorug05G0530200 Rorug06G0489200 Rorug07G0104900 Rorug07G0209400 Rorug07G0274500
rosa_samantha Rh2BG222800 Rh2BG618900 Rh2CG214400 Rh2CG587200 Rh6BG040200 Rh6CG206500 Rh6DG035600 Rh7BG401600 Rh7BG401700 Rh7DG418400
rosa_wichuraiana Rw2G050240 Rw6G003920 Rw7G035430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 122
Acc36I ACCTGC 1 cut(s) 633
Acc65I GGTACC 1 cut(s) 431
AccB1I GGYRCC 5 cut(s) 170, 242, 431, 1038, 1307
AccB7I CCANNNNNTGG 1 cut(s) 1030
AccBSI CCGCTC 1 cut(s) 466
AccII CGCG 2 cut(s) 132, 192
AclWI GGATC 7 cut(s) 354, 445, 457, 787, 800, 911, 1278
AcoI YGGCCR 4 cut(s) 100, 127, 906, 996
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 7 cut(s) 433, 515, 845, 935, 956, 1196, 1223
AfiI CCNNNNNNNGG 3 cut(s) 926, 1030, 1108
AflIII ACRYGT 1 cut(s) 597
AgeI ACCGGT 1 cut(s) 167
AgsI TTSAA 4 cut(s) 148, 398, 415, 1054
AjiI CACGTC 2 cut(s) 184, 598
AjnI CCWGG 2 cut(s) 354, 788
AjuI GAANNNNNNNTTGG 4 cut(s) 488, 520, 1193, 1225
AleI CACNNNNGTG 1 cut(s) 596
AloI GAACNNNNNNTCC 2 cut(s) 1235, 1267
AluBI AGCT 7 cut(s) 67, 256, 274, 373, 499, 740, 856
AluI AGCT 7 cut(s) 67, 256, 274, 373, 499, 740, 856
Alw21I GWGCWC 4 cut(s) 69, 84, 591, 742
Alw26I GTCTC 2 cut(s) 158, 697
AlwI GGATC 7 cut(s) 354, 445, 457, 787, 800, 911, 1278
Ama87I CYCGRG 1 cut(s) 77
AoxI GGCC 7 cut(s) 91, 100, 127, 621, 906, 939, 996
ApeKI GCWGC 5 cut(s) 271, 296, 853, 945, 1277
AsiGI ACCGGT 1 cut(s) 167
Asp718I GGTACC 1 cut(s) 431
AspLEI GCGC 1 cut(s) 194
AspS9I GGNCC 4 cut(s) 92, 232, 358, 645
AsuC2I CCSGG 2 cut(s) 1048, 1092
AsuHPI GGTGA 6 cut(s) 865, 974, 1109, 1241, 1346, 1355
AvaI CYCGRG 1 cut(s) 77
AvaII GGWCC 3 cut(s) 232, 358, 645
AxyI CCTNAGG 1 cut(s) 525
BaeGI GKGCMC 1 cut(s) 1043
BaeI ACNNNNGTAYC 2 cut(s) 1213, 1246
BalI TGGCCA 3 cut(s) 102, 908, 998
BamHI GGATCC 1 cut(s) 792
BanI GGYRCC 5 cut(s) 170, 242, 431, 1038, 1307
BanII GRGCYC 3 cut(s) 69, 216, 742
BauI CACGAG 2 cut(s) 848, 1263
BbsI GAAGAC 2 cut(s) 297, 403
Bbv12I GWGCWC 4 cut(s) 69, 84, 591, 742
BbvCI CCTCAGC 1 cut(s) 1155
BbvI GCAGC 5 cut(s) 283, 283, 865, 932, 1264
BccI CCATC 6 cut(s) 92, 203, 335, 632, 898, 1010
BceAI ACGGC 2 cut(s) 100, 404
BcgI CGANNNNNNTGC 6 cut(s) 152, 186, 322, 356, 631, 665
BciT130I CCWGG 2 cut(s) 356, 790
BclI TGATCA 1 cut(s) 1174
BcnI CCSGG 2 cut(s) 1048, 1092
BcoDI GTCTC 2 cut(s) 158, 697
BfuAI ACCTGC 1 cut(s) 633
BglI GCCNNNNNGGC 2 cut(s) 99, 995
Bme1390I CCNGG 4 cut(s) 356, 790, 1048, 1092
Bme18I GGWCC 3 cut(s) 232, 358, 645
BmeT110I CYCGRG 1 cut(s) 77
BmgBI CACGTC 2 cut(s) 184, 598
BmgT120I GGNCC 4 cut(s) 92, 232, 358, 645
BmrFI CCNGG 4 cut(s) 356, 790, 1048, 1092
BmrI ACTGGG 1 cut(s) 399
BmsI GCATC 2 cut(s) 96, 372
BmuI ACTGGG 1 cut(s) 399
BpiI GAAGAC 2 cut(s) 297, 403
BplI GAGNNNNNCTC 6 cut(s) 842, 874, 881, 913, 1148, 1180
BpmI CTGGAG 4 cut(s) 230, 482, 605, 1304
Bpu10I CCTNAGC 2 cut(s) 267, 1155
BpuMI CCSGG 2 cut(s) 1048, 1092
BsaAI YACGTR 1 cut(s) 1225
BsaHI GRCGYC 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 158
BsaJI CCNNGG 8 cut(s) 130, 313, 788, 925, 958, 975, 1107, 1320
BsaWI WCCGGW 2 cut(s) 167, 434
Bsc4I CCNNNNNNNGG 3 cut(s) 926, 1030, 1108
Bse118I RCCGGY 2 cut(s) 167, 239
Bse1I ACTGG 3 cut(s) 394, 1024, 1146
Bse21I CCTNAGG 1 cut(s) 525
Bse3DI GCAATG 1 cut(s) 452
BseBI CCWGG 2 cut(s) 356, 790
BseDI CCNNGG 8 cut(s) 130, 313, 788, 925, 958, 975, 1107, 1320
BseGI GGATG 2 cut(s) 757, 985
BseLI CCNNNNNNNGG 3 cut(s) 926, 1030, 1108
BseMI GCAATG 1 cut(s) 452
BseMII CTCAG 7 cut(s) 258, 539, 710, 825, 858, 1146, 1269
BseNI ACTGG 3 cut(s) 394, 1024, 1146
BseRI GAGGAG 2 cut(s) 513, 1313
BseSI GKGCMC 1 cut(s) 1043
BseX3I CGGCCG 1 cut(s) 127
BseXI GCAGC 5 cut(s) 283, 283, 865, 932, 1264
BseYI CCCAGC 3 cut(s) 60, 110, 499
BsgI GTGCAG 2 cut(s) 370, 1133
Bsh1236I CGCG 2 cut(s) 132, 192
Bsh1285I CGRYCG 1 cut(s) 130
BshFI GGCC 7 cut(s) 93, 102, 129, 623, 908, 941, 998
BshNI GGYRCC 5 cut(s) 170, 242, 431, 1038, 1307
BshTI ACCGGT 1 cut(s) 167
BsiEI CGRYCG 1 cut(s) 130
BsiHKAI GWGCWC 4 cut(s) 69, 84, 591, 742
BsiHKCI CYCGRG 1 cut(s) 77
BsiSI CCGG 8 cut(s) 36, 168, 174, 240, 282, 435, 1047, 1092
BslFI GGGAC 3 cut(s) 170, 631, 648
BslI CCNNNNNNNGG 3 cut(s) 926, 1030, 1108
BsmAI GTCTC 2 cut(s) 158, 697
BsmBI CGTCTC 1 cut(s) 697
BsmFI GGGAC 3 cut(s) 170, 631, 648
BsmI GAATGC 1 cut(s) 991
BsnI GGCC 7 cut(s) 93, 102, 129, 623, 908, 941, 998
Bso31I GGTCTC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 77
Bsp1286I GDGCHC 6 cut(s) 69, 84, 216, 591, 742, 1043
Bsp19I CCATGG 1 cut(s) 925
BspANI GGCC 7 cut(s) 93, 102, 129, 623, 908, 941, 998
BspCNI CTCAG 7 cut(s) 259, 538, 709, 826, 859, 1147, 1268
BspFNI CGCG 2 cut(s) 132, 192
BspMI ACCTGC 1 cut(s) 633
BspPI GGATC 7 cut(s) 354, 445, 457, 787, 800, 911, 1278
BspQI GCTCTTC 1 cut(s) 263
BspT107I GGYRCC 5 cut(s) 170, 242, 431, 1038, 1307
BspTNI GGTCTC 1 cut(s) 158
BsrBI CCGCTC 1 cut(s) 466
BsrDI GCAATG 1 cut(s) 452
BsrFI RCCGGY 2 cut(s) 167, 239
BsrI ACTGG 3 cut(s) 394, 1024, 1146
BssAI RCCGGY 2 cut(s) 167, 239
BssECI CCNNGG 8 cut(s) 130, 313, 788, 925, 958, 975, 1107, 1320
BssNI GRCGYC 1 cut(s) 141
BssSI CACGAG 2 cut(s) 848, 1263
BssT1I CCWWGG 3 cut(s) 925, 975, 1107
Bst2BI CACGAG 2 cut(s) 848, 1263
Bst2UI CCWGG 2 cut(s) 356, 790
Bst4CI ACNGT 8 cut(s) 124, 220, 511, 560, 881, 959, 1084, 1334
Bst6I CTCTTC 1 cut(s) 263
BstACI GRCGYC 1 cut(s) 141
BstAPI GCANNNNNTGC 1 cut(s) 57
BstBAI YACGTR 1 cut(s) 1225
BstC8I GCNNGC 7 cut(s) 33, 58, 254, 375, 894, 943, 1206
BstDEI CTNAG 7 cut(s) 267, 525, 696, 834, 867, 1155, 1255
BstDSI CCRYGG 4 cut(s) 130, 313, 925, 958
BstEII GGTNACC 1 cut(s) 1097
BstENI CCTNNNNNAGG 1 cut(s) 1106
BstF5I GGATG 2 cut(s) 757, 985
BstFNI CGCG 2 cut(s) 132, 192
BstHHI GCGC 1 cut(s) 194
BstMAI GTCTC 2 cut(s) 158, 697
BstMCI CGRYCG 1 cut(s) 130
BstNI CCWGG 2 cut(s) 356, 790
BstPI GGTNACC 1 cut(s) 1097
BstSCI CCNGG 4 cut(s) 354, 788, 1046, 1090
BstSLI GKGCMC 1 cut(s) 1043
BstUI CGCG 2 cut(s) 132, 192
BstV1I GCAGC 5 cut(s) 283, 283, 865, 932, 1264
BstV2I GAAGAC 2 cut(s) 297, 403
BstX2I RGATCY 3 cut(s) 346, 792, 1270
BstYI RGATCY 3 cut(s) 346, 792, 1270
BstZI CGGCCG 1 cut(s) 127
Bsu36I CCTNAGG 1 cut(s) 525
BsuRI GGCC 7 cut(s) 93, 102, 129, 623, 908, 941, 998
BtgI CCRYGG 4 cut(s) 130, 313, 925, 958
BtgZI GCGATG 1 cut(s) 150
BtrI CACGTC 2 cut(s) 184, 598
BtsCI GGATG 2 cut(s) 757, 985
BtsIMutI CAGTG 5 cut(s) 387, 507, 565, 886, 1153
BveI ACCTGC 1 cut(s) 633
Cac8I GCNNGC 7 cut(s) 33, 58, 254, 375, 894, 943, 1206
CfoI GCGC 1 cut(s) 194
Cfr10I RCCGGY 2 cut(s) 167, 239
Cfr13I GGNCC 4 cut(s) 92, 232, 358, 645
Cfr42I CCGCGG 1 cut(s) 133
CseI GACGC 4 cut(s) 149, 302, 650, 708
Csp6I GTAC 7 cut(s) 432, 514, 844, 934, 955, 1195, 1222
CspAI ACCGGT 1 cut(s) 167
CspCI CAANNNNNGTGG 2 cut(s) 1132, 1167
CviAII CATG 5 cut(s) 901, 926, 937, 1129, 1237
CviQI GTAC 7 cut(s) 432, 514, 844, 934, 955, 1195, 1222
DdeI CTNAG 7 cut(s) 267, 525, 696, 834, 867, 1155, 1255
DrdI GACNNNNNNGTC 1 cut(s) 122
DseDI GACNNNNNNGTC 1 cut(s) 122
EaeI YGGCCR 4 cut(s) 100, 127, 906, 996
EagI CGGCCG 1 cut(s) 127
Eam1104I CTCTTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 263
Ecl136II GAGCTC 2 cut(s) 67, 740
EclXI CGGCCG 1 cut(s) 127
Eco130I CCWWGG 3 cut(s) 925, 975, 1107
Eco24I GRGCYC 3 cut(s) 69, 216, 742
Eco31I GGTCTC 1 cut(s) 158
Eco47I GGWCC 3 cut(s) 232, 358, 645
Eco52I CGGCCG 1 cut(s) 127
Eco53kI GAGCTC 2 cut(s) 67, 740
Eco81I CCTNAGG 1 cut(s) 525
Eco88I CYCGRG 1 cut(s) 77
Eco91I GGTNACC 1 cut(s) 1097
EcoICRI GAGCTC 2 cut(s) 67, 740
EcoNI CCTNNNNNAGG 1 cut(s) 1106
EcoO109I RGGNCCY 1 cut(s) 645
EcoO65I GGTNACC 1 cut(s) 1097
EcoRII CCWGG 2 cut(s) 354, 788
EcoT14I CCWWGG 3 cut(s) 925, 975, 1107
EcoT38I GRGCYC 3 cut(s) 69, 216, 742
ErhI CCWWGG 3 cut(s) 925, 975, 1107
Esp3I CGTCTC 1 cut(s) 697
FaeI CATG 5 cut(s) 904, 929, 940, 1132, 1240
FaiI YATR 9 cut(s) 784, 803, 816, 902, 927, 938, 1130, 1238, 1296
FaqI GGGAC 3 cut(s) 170, 631, 648
FatI CATG 5 cut(s) 900, 925, 936, 1128, 1236
FauI CCCGC 2 cut(s) 197, 929
FbaI TGATCA 1 cut(s) 1174
FokI GGATG 2 cut(s) 764, 992
FriOI GRGCYC 3 cut(s) 69, 216, 742
GlaI GCGC 1 cut(s) 193
GsaI CCCAGC 3 cut(s) 64, 114, 503
GsuI CTGGAG 4 cut(s) 230, 482, 605, 1304
HaeIII GGCC 7 cut(s) 93, 102, 129, 623, 908, 941, 998
HapII CCGG 8 cut(s) 36, 168, 174, 240, 282, 435, 1047, 1092
HgaI GACGC 4 cut(s) 149, 302, 650, 708
HhaI GCGC 1 cut(s) 194
Hin1I GRCGYC 1 cut(s) 141
Hin1II CATG 5 cut(s) 904, 929, 940, 1132, 1240
Hin6I GCGC 1 cut(s) 192
HinP1I GCGC 1 cut(s) 192
HinfI GANTC 4 cut(s) 39, 504, 682, 1313
HpaII CCGG 8 cut(s) 36, 168, 174, 240, 282, 435, 1047, 1092
HphI GGTGA 6 cut(s) 865, 974, 1109, 1241, 1346, 1355
Hpy166II GTNNAC 1 cut(s) 514
Hpy188I TCNGA 5 cut(s) 163, 681, 744, 1191, 1258
Hpy188III TCNNGA 7 cut(s) 209, 367, 461, 766, 1006, 1265, 1283
Hpy8I GTNNAC 1 cut(s) 514
Hpy99I CGWCG 7 cut(s) 128, 206, 230, 425, 599, 724, 737
HpyAV CCTTC 6 cut(s) 154, 163, 528, 832, 1238, 1282
HpyCH4III ACNGT 8 cut(s) 124, 220, 511, 560, 881, 959, 1084, 1334
HpyCH4IV ACGT 3 cut(s) 183, 597, 1224
HpyCH4V TGCA 5 cut(s) 12, 387, 1114, 1128, 1216
HpyF3I CTNAG 7 cut(s) 267, 525, 696, 834, 867, 1155, 1255
HpySE526I ACGT 3 cut(s) 183, 597, 1224
Hsp92I GRCGYC 1 cut(s) 141
Hsp92II CATG 5 cut(s) 904, 929, 940, 1132, 1240
HspAI GCGC 1 cut(s) 192
KpnI GGTACC 1 cut(s) 435
Ksp22I TGATCA 1 cut(s) 1174
KspI CCGCGG 1 cut(s) 133
LguI GCTCTTC 1 cut(s) 263
LmnI GCTCC 7 cut(s) 64, 211, 463, 547, 586, 737, 823
Lsp1109I GCAGC 5 cut(s) 283, 283, 865, 932, 1264
LweI GCATC 2 cut(s) 96, 372
MaeII ACGT 3 cut(s) 183, 597, 1224
MaeIII GTNAC 4 cut(s) 317, 754, 1097, 1334
MbiI CCGCTC 1 cut(s) 466
MboII GAAGA 6 cut(s) 148, 190, 250, 302, 403, 699
MflI RGATCY 3 cut(s) 346, 792, 1270
MhlI GDGCHC 6 cut(s) 69, 84, 216, 591, 742, 1043
MlsI TGGCCA 3 cut(s) 102, 908, 998
MluCI AATT 1 cut(s) 1066
MluNI TGGCCA 3 cut(s) 102, 908, 998
MlyI GAGTC 1 cut(s) 1322
MmeI TCCRAC 1 cut(s) 1161
Mox20I TGGCCA 3 cut(s) 102, 908, 998
MscI TGGCCA 3 cut(s) 102, 908, 998
MslI CAYNNNNRTG 1 cut(s) 596
Msp20I TGGCCA 3 cut(s) 102, 908, 998
MspA1I CMGCKG 3 cut(s) 132, 833, 992
MspI CCGG 8 cut(s) 36, 168, 174, 240, 282, 435, 1047, 1092
MspR9I CCNGG 4 cut(s) 356, 790, 1048, 1092
Mva1269I GAATGC 1 cut(s) 991
MvaI CCWGG 2 cut(s) 356, 790
MvnI CGCG 2 cut(s) 132, 192
NciI CCSGG 2 cut(s) 1048, 1092
NcoI CCATGG 1 cut(s) 925
NlaIII CATG 5 cut(s) 904, 929, 940, 1132, 1240
NmeAIII GCCGAG 2 cut(s) 1336, 1345
NmuCI GTSAC 4 cut(s) 317, 754, 1097, 1334
OliI CACNNNNGTG 1 cut(s) 596
PaeR7I CTCGAG 1 cut(s) 77
PciSI GCTCTTC 1 cut(s) 263
PcsI WCGNNNNNNNCGW 2 cut(s) 132, 716
PctI GAATGC 1 cut(s) 991
PfeI GAWTC 3 cut(s) 39, 504, 682
PflFI GACNNNGTC 2 cut(s) 230, 718
PflMI CCANNNNNTGG 1 cut(s) 1030
PinAI ACCGGT 1 cut(s) 167
PleI GAGTC 1 cut(s) 1321
PpsI GAGTC 1 cut(s) 1321
Ppu21I YACGTR 1 cut(s) 1225
PpuMI RGGWCCY 1 cut(s) 645
Psp124BI GAGCTC 2 cut(s) 69, 742
Psp5II RGGWCCY 1 cut(s) 645
Psp6I CCWGG 2 cut(s) 354, 788
PspEI GGTNACC 1 cut(s) 1097
PspFI CCCAGC 3 cut(s) 60, 110, 499
PspGI CCWGG 2 cut(s) 354, 788
PspPI GGNCC 4 cut(s) 92, 232, 358, 645
PspPPI RGGWCCY 1 cut(s) 645
PspXI VCTCGAGB 1 cut(s) 77
PsuI RGATCY 3 cut(s) 346, 792, 1270
PsyI GACNNNGTC 2 cut(s) 230, 718
RsaI GTAC 7 cut(s) 433, 515, 845, 935, 956, 1196, 1223
RsaNI GTAC 7 cut(s) 432, 514, 844, 934, 955, 1195, 1222
RseI CAYNNNNRTG 1 cut(s) 596
SacI GAGCTC 2 cut(s) 69, 742
SacII CCGCGG 1 cut(s) 133
SapI GCTCTTC 1 cut(s) 263
Sau96I GGNCC 4 cut(s) 92, 232, 358, 645
SchI GAGTC 1 cut(s) 1322
ScrFI CCNGG 4 cut(s) 356, 790, 1048, 1092
SduI GDGCHC 6 cut(s) 69, 84, 216, 591, 742, 1043
SfaNI GCATC 2 cut(s) 96, 372
SfiI GGCCNNNNNGGCC 1 cut(s) 99
Sfr274I CTCGAG 1 cut(s) 77
Sfr303I CCGCGG 1 cut(s) 133
SgrBI CCGCGG 1 cut(s) 133
SinI GGWCC 3 cut(s) 232, 358, 645
SlaI CTCGAG 1 cut(s) 77
SmiMI CAYNNNNRTG 1 cut(s) 596
SmlI CTYRAG 1 cut(s) 77
SmoI CTYRAG 1 cut(s) 77
Sse9I AATT 1 cut(s) 1066
SstI GAGCTC 2 cut(s) 69, 742
StyD4I CCNGG 4 cut(s) 354, 788, 1046, 1090
StyI CCWWGG 3 cut(s) 925, 975, 1107
TaaI ACNGT 8 cut(s) 124, 220, 511, 560, 881, 959, 1084, 1334
TaiI ACGT 3 cut(s) 186, 600, 1227
TaqI TCGA 7 cut(s) 78, 204, 225, 612, 651, 657, 732
TaqII GACCGA 1 cut(s) 773
TasI AATT 1 cut(s) 1066
TatI WGTACW 1 cut(s) 933
TauI GCSGC 5 cut(s) 132, 135, 469, 642, 992
TfiI GAWTC 3 cut(s) 39, 504, 682
TscAI CASTG 5 cut(s) 394, 514, 565, 886, 1153
TseFI GTSAC 4 cut(s) 317, 754, 1097, 1334
TseI GCWGC 5 cut(s) 271, 296, 853, 945, 1277
Tsp45I GTSAC 4 cut(s) 317, 754, 1097, 1334
TspGWI ACGGA 2 cut(s) 498, 750
TspRI CASTG 5 cut(s) 394, 514, 565, 886, 1153
Tth111I GACNNNGTC 2 cut(s) 230, 718
Van91I CCANNNNNTGG 1 cut(s) 1030
VpaK11BI GGWCC 3 cut(s) 232, 358, 645
XagI CCTNNNNNAGG 1 cut(s) 1106
XhoI CTCGAG 1 cut(s) 77
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.