MD10G1111600.v1.1

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000549
Physical Location & Seq
Forward (+)
18308705 .. 18311067
2363 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1111600.v1.1.491

Sequence Viewer

Length: 1311 bp
ATGAGGGAGTGCATTTCGATCCACATCGGTCAGGCTGGGATCCAGGTCGGCAATGCCTGCTGGGAGCTTTACTGTCTTGAGCATGGCATTCAGCCTGATGGCCAAATGCCTAGTGACAAGACCATCGGTGGAGGTGATGATGCCTTCAACACCTTCTTCAGTGAAACTGGAGCTGGCAAGCATGTGCCTCGCGCTATTTTTGTTGATCTTGAGCCCACTGTTATTGATGAAGTGAGGACTGGAACTTACCGCCAGCTCTTCCACCCTGAGCAACTTATTAGTGGCAAGGAAGATGCTGCCAACAACTTTGCCCGTGGTCATTACACCATTGGCAAGGAGATTGTTGATCTCTGCTTGGACCGCATCCGTAAACTTGCTGACAACTGCACTGGGCTTCAAGGGTTCCTTGTTTTCAATGCTGTTGGTGGAGGAACCGGCTCTGGAAAGAAGTCAAAGCTTGGTTTCACTGTGTATCCATCTCCACAGGTTTCTACATCTGTGGTTGAGCCCTACAACAGTGTCCTCTCAACCCACTCCCTCCTGGAACACACCGATGTTGCTGTTCTCCTTGACAACGAGGCTATCTATGATATCTGCAGGCGCTCTCTTGACATTGAGCGACCCACCTACACCAACCTCAACCGCCTTGTGTCTCAGGTCATTTCCTCTTTGACTGCTTCTCTGAGGTTTGATGGTGCCCTTAATGTGGACGTGACTGAATTCCAGACCAACTTGGTCCCATACCCCAGAATCCACTTTATGCTTTCCTCATATGCACCAGTCATCTCTGCGGAGAAGGCGTACCATGAACAACTCTCTGTGGCTGAAATCACCAACAGTGCCTTCGAGCCCTCATCCATGATGGCAAAGTGTGACCCCCGCCACGGCAAATATATGGCCTGCTGTCTGATGTACCGTGGTGACGTTGTACCCAAGGATGTGAATGCCGCTGTTGCCACCATCAAGACCAAGCGCACCATTCAGTTTGTGGACTGGTGTCCTACTGGATTCAAGTGCGGCATCAACTACCAGCCACCAACTGTTGTCCCAGGAGGCGACCTTGCCAAGGTGCAGAGGGCTGTGTGCATGATCTCTAACTCGACCAGTGTTGCTGAGGTGTTCTCTAGAATTGACCACAAGTTTGATCTCATGTATGCCAAGCGTGCCTTTGTGCACTGGTATGTGGGTGAGGGTATGGAGGAAGGAGAGTTCTCTGAAGCCCGTGAGGATCTTGCTGCCCTTGAGAAGGATTATGAAGAAGTTGGTGCCGAGTCCGCTGAAGGTGAGGATGATGGAGAAGACGAGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04145 ko04210 ko04530 ko04540 ko05130 map04145 map04210 map04530 map04540 map05130
Pfam Domains
Protein Families
Tubulin Tubulin_C

Protein Analysis

437

Amino Acids

48.08

Weight (kDa)

4.95

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tubulin PF00091 3 - 199 2.3e-51 Tubulin/FtsZ family, GTPase domain
Tubulin_C PF03953 249 - 378 4.3e-52 Tubulin C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000549)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04820 AT1G50010 AT4G14960 AT4G14960
fragaria_vesca FvH4_1g18660 FvH4_2g03140 FvH4_5g33560 FvH4_6g48940 FvH4_6g48940
malus_domestica MD02G1204800.v1.1 MD05G1106800.v1.1 MD08G1210600.v1.1 MD09G1049500.v1.1 MD10G1111600.v1.1 MD15G1398700.v1.1 MD17G1049700.v1.1
prunus_persica Prupe.1G542600_v2.0.a1 Prupe.3G269300_v2.0.a1 Prupe.6G212700_v2.0.a1 Prupe.8G150900_v2.0.a1
pyrus_communis pycom05g10370 pycom08g18150 pycom10g09640 pycom10g09660 pycom111g04050 pycom15g35470 pycom17g04460
rosa_chinensis RchiOBHm_Chr2g0109481 RchiOBHm_Chr2g0168751 RchiOBHm_Chr3g0453071 RchiOBHm_Chr3g0460741 RchiOBHm_Chr3g0467971 RchiOBHm_Chr4g0400901 RchiOBHm_Chr6g0248011 RchiOBHm_Chr7g0232381 RchiOBHm_Chr7g0238121
rosa_laevigata RLG00000001350 RLG00000009167 RLG00000015163 RLG00000017708 RLG00000017741 RLG00000021807 RLG00000023849 RLG00000026518
rosa_multiflora Rmu_sc0000332.1_g000021 Rmu_sc0000332.1_g000029 Rmu_sc0002416.1_g000007 Rmu_sc0002611.1_g000001 Rmu_sc0003113.1_g000016 Rmu_sc0004780.1_g000001 Rmu_sc0004805.1_g000035 Rmu_sc0010633.1_g000010 Rmu_sc0011069.1_g000003 Rmu_sc0016170.1_g000002 Rmu_sc0025757.1_g000003 Rmu_ssc0000484.1_g000003
rosa_roxburghii Rroxscaffold_2G00134200 Rroxscaffold_4G00321030 Rroxscaffold_7G00213500
rosa_rugosa Rorug01G0283100 Rorug02G0160500 Rorug02G0535300 Rorug04G0027000 Rorug04G0328100 Rorug05G0388700 Rorug05G0530200 Rorug06G0489200 Rorug07G0104900 Rorug07G0209400 Rorug07G0274500
rosa_samantha Rh2BG222800 Rh2BG618900 Rh2CG214400 Rh2CG587200 Rh6BG040200 Rh6CG206500 Rh6DG035600 Rh7BG401600 Rh7BG401700 Rh7DG418400
rosa_wichuraiana Rw2G050240 Rw6G003920 Rw7G035430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 695, 1265
AccII CGCG 1 cut(s) 192
AciI CCGC 8 cut(s) 250, 361, 643, 791, 880, 948, 1017, 1275
AclWI GGATC 4 cut(s) 13, 34, 47, 1236
AcoI YGGCCR 1 cut(s) 100
AcsI RAATTY 1 cut(s) 719
AcuI CTGAAG 3 cut(s) 142, 1236, 1299
AfaI GTAC 4 cut(s) 803, 914, 930, 1307
AfiI CCNNNNNNNGG 4 cut(s) 706, 884, 1066, 1246
AgsI TTSAA 4 cut(s) 148, 398, 415, 1012
AjiI CACGTC 1 cut(s) 712
AjnI CCWGG 3 cut(s) 42, 540, 1048
AjuI GAANNNNNNNTTGG 2 cut(s) 827, 859
AloI GAACNNNNNNTCC 2 cut(s) 1193, 1225
AluBI AGCT 4 cut(s) 67, 173, 256, 457
AluI AGCT 4 cut(s) 67, 173, 256, 457
Alw21I GWGCWC 1 cut(s) 1176
Alw26I GTCTC 1 cut(s) 657
Alw44I GTGCAC 1 cut(s) 1172
AlwI GGATC 4 cut(s) 13, 34, 47, 1236
AoxI GGCC 2 cut(s) 100, 897
ApaLI GTGCAC 1 cut(s) 1172
ApeKI GCWGC 2 cut(s) 296, 1235
ApoI RAATTY 1 cut(s) 719
ArsI GACNNNNNNTTYG 2 cut(s) 1124, 1156
AspLEI GCGC 3 cut(s) 194, 603, 975
AspS9I GGNCC 2 cut(s) 358, 736
AsuHPI GGTGA 5 cut(s) 146, 823, 932, 1199, 1295
AvaII GGWCC 2 cut(s) 358, 736
BaeGI GKGCMC 2 cut(s) 700, 1176
BalI TGGCCA 1 cut(s) 102
BamHI GGATCC 1 cut(s) 39
BanI GGYRCC 2 cut(s) 695, 1265
BanII GRGCYC 3 cut(s) 216, 510, 852
BbsI GAAGAC 1 cut(s) 1305
Bbv12I GWGCWC 1 cut(s) 1176
BbvCI CCTCAGC 1 cut(s) 1113
BbvI GCAGC 2 cut(s) 283, 1222
BccI CCATC 7 cut(s) 92, 131, 484, 686, 856, 968, 1286
BceAI ACGGC 1 cut(s) 901
BcgI CGANNNNNNTGC 2 cut(s) 170, 204
BciT130I CCWGG 3 cut(s) 44, 542, 1050
BciVI GTATCC 1 cut(s) 483
BcoDI GTCTC 1 cut(s) 657
BfaI CTAG 2 cut(s) 111, 1125
BfmI CTRYAG 1 cut(s) 595
BfoI RGCGCY 1 cut(s) 604
BfuI GTATCC 1 cut(s) 483
BisI GCNGC 4 cut(s) 297, 948, 1018, 1236
BlsI GCNGC 4 cut(s) 298, 949, 1019, 1237
BmcAI AGTACT 1 cut(s) 1307
Bme1390I CCNGG 3 cut(s) 44, 542, 1050
Bme18I GGWCC 2 cut(s) 358, 736
BmgBI CACGTC 1 cut(s) 712
BmgT120I GGNCC 2 cut(s) 358, 736
BmiI GGNNCC 6 cut(s) 41, 404, 433, 697, 738, 1267
BmrFI CCNGG 3 cut(s) 44, 542, 1050
BmrI ACTGGG 1 cut(s) 399
BmsI GCATC 4 cut(s) 130, 283, 372, 1029
BmuI ACTGGG 1 cut(s) 399
BoxI GACNNNNGTC 1 cut(s) 996
BpiI GAAGAC 1 cut(s) 1305
BplI GAGNNNNNCTC 2 cut(s) 1106, 1138
BpmI CTGGAG 1 cut(s) 189
Bpu10I CCTNAGC 2 cut(s) 267, 1113
BpuEI CTTGAG 3 cut(s) 98, 230, 1262
BsaBI GATNNNNATC 1 cut(s) 23
BsaJI CCNNGG 6 cut(s) 313, 883, 916, 933, 1048, 1065
BsaXI ACNNNNNCTCC 2 cut(s) 785, 815
Bsc4I CCNNNNNNNGG 4 cut(s) 706, 884, 1066, 1246
Bse118I RCCGGY 1 cut(s) 434
Bse1I ACTGG 8 cut(s) 172, 244, 394, 779, 998, 1009, 1104, 1181
Bse3DI GCAATG 1 cut(s) 58
Bse8I GATNNNNATC 1 cut(s) 23
BseBI CCWGG 3 cut(s) 44, 542, 1050
BseDI CCNNGG 6 cut(s) 313, 883, 916, 933, 1048, 1065
BseGI GGATG 4 cut(s) 363, 854, 943, 1294
BseJI GATNNNNATC 1 cut(s) 23
BseLI CCNNNNNNNGG 4 cut(s) 706, 884, 1066, 1246
BseMI GCAATG 1 cut(s) 58
BseMII CTCAG 4 cut(s) 258, 668, 674, 1104
BseNI ACTGG 8 cut(s) 172, 244, 394, 779, 998, 1009, 1104, 1181
BseSI GKGCMC 2 cut(s) 700, 1176
BseXI GCAGC 2 cut(s) 283, 1222
BseYI CCCAGC 2 cut(s) 35, 60
BsgI GTGCAG 2 cut(s) 370, 1091
Bsh1236I CGCG 1 cut(s) 192
BshFI GGCC 2 cut(s) 102, 899
BshNI GGYRCC 2 cut(s) 695, 1265
BsiHKAI GWGCWC 1 cut(s) 1176
BsiSI CCGG 1 cut(s) 435
BslFI GGGAC 2 cut(s) 722, 1031
BslI CCNNNNNNNGG 4 cut(s) 706, 884, 1066, 1246
BsmAI GTCTC 1 cut(s) 657
BsmFI GGGAC 2 cut(s) 722, 1031
BsmI GAATGC 2 cut(s) 87, 949
BsnI GGCC 2 cut(s) 102, 899
Bsp1286I GDGCHC 5 cut(s) 216, 510, 700, 852, 1176
Bsp143I GATC 7 cut(s) 18, 39, 205, 346, 1089, 1144, 1228
BspACI CCGC 8 cut(s) 250, 361, 643, 791, 880, 948, 1017, 1275
BspANI GGCC 2 cut(s) 102, 899
BspCNI CTCAG 4 cut(s) 259, 667, 675, 1105
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 6 cut(s) 41, 404, 433, 697, 738, 1267
BspMAI CTGCAG 1 cut(s) 599
BspPI GGATC 4 cut(s) 13, 34, 47, 1236
BspQI GCTCTTC 1 cut(s) 263
BspT107I GGYRCC 2 cut(s) 695, 1265
BsrDI GCAATG 1 cut(s) 58
BsrFI RCCGGY 1 cut(s) 434
BsrI ACTGG 8 cut(s) 172, 244, 394, 779, 998, 1009, 1104, 1181
BssAI RCCGGY 1 cut(s) 434
BssECI CCNNGG 6 cut(s) 313, 883, 916, 933, 1048, 1065
BssMI GATC 7 cut(s) 18, 39, 205, 346, 1089, 1144, 1228
BssT1I CCWWGG 2 cut(s) 933, 1065
Bst2UI CCWGG 3 cut(s) 44, 542, 1050
Bst4CI ACNGT 7 cut(s) 74, 220, 469, 518, 839, 917, 1042
Bst6I CTCTTC 1 cut(s) 263
BstAPI GCANNNNNTGC 1 cut(s) 57
BstC8I GCNNGC 7 cut(s) 58, 175, 179, 254, 599, 901, 1164
BstDEI CTNAG 4 cut(s) 267, 654, 683, 1113
BstDSI CCRYGG 3 cut(s) 313, 883, 916
BstENI CCTNNNNNAGG 2 cut(s) 1064, 1244
BstF5I GGATG 4 cut(s) 363, 854, 943, 1294
BstFNI CGCG 1 cut(s) 192
BstH2I RGCGCY 1 cut(s) 604
BstHHI GCGC 3 cut(s) 194, 603, 975
BstKTI GATC 7 cut(s) 21, 42, 208, 349, 1092, 1147, 1231
BstMAI GTCTC 1 cut(s) 657
BstMBI GATC 7 cut(s) 18, 39, 205, 346, 1089, 1144, 1228
BstMWI GCNNNNNNNGC 6 cut(s) 57, 360, 797, 953, 1163, 1274
BstNI CCWGG 3 cut(s) 44, 542, 1050
BstNSI RCATGY 1 cut(s) 185
BstPAI GACNNNNGTC 1 cut(s) 996
BstSCI CCNGG 3 cut(s) 42, 540, 1048
BstSFI CTRYAG 1 cut(s) 595
BstSLI GKGCMC 2 cut(s) 700, 1176
BstUI CGCG 1 cut(s) 192
BstV1I GCAGC 2 cut(s) 283, 1222
BstV2I GAAGAC 1 cut(s) 1305
BstX2I RGATCY 2 cut(s) 39, 1228
BstYI RGATCY 2 cut(s) 39, 1228
BsuI GTATCC 1 cut(s) 483
BsuRI GGCC 2 cut(s) 102, 899
BtgI CCRYGG 3 cut(s) 313, 883, 916
BtrI CACGTC 1 cut(s) 712
BtsCI GGATG 4 cut(s) 363, 854, 943, 1294
BtsIMutI CAGTG 8 cut(s) 166, 216, 387, 465, 523, 844, 1111, 1174
Cac8I GCNNGC 7 cut(s) 58, 175, 179, 254, 599, 901, 1164
CfoI GCGC 3 cut(s) 194, 603, 975
Cfr10I RCCGGY 1 cut(s) 434
Cfr13I GGNCC 2 cut(s) 358, 736
Csp6I GTAC 4 cut(s) 802, 913, 929, 1306
CspCI CAANNNNNGTGG 2 cut(s) 205, 240
CviAII CATG 6 cut(s) 83, 182, 806, 859, 1087, 1150
CviQI GTAC 4 cut(s) 802, 913, 929, 1306
DdeI CTNAG 4 cut(s) 267, 654, 683, 1113
DpnI GATC 7 cut(s) 20, 41, 207, 348, 1091, 1146, 1230
DpnII GATC 7 cut(s) 18, 39, 205, 346, 1089, 1144, 1228
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 1 cut(s) 263
EarI CTCTTC 1 cut(s) 263
Eco130I CCWWGG 2 cut(s) 933, 1065
Eco24I GRGCYC 3 cut(s) 216, 510, 852
Eco32I GATATC 1 cut(s) 592
Eco47I GGWCC 2 cut(s) 358, 736
Eco57I CTGAAG 3 cut(s) 142, 1236, 1299
EcoNI CCTNNNNNAGG 2 cut(s) 1064, 1244
EcoRI GAATTC 1 cut(s) 719
EcoRII CCWGG 3 cut(s) 42, 540, 1048
EcoRV GATATC 1 cut(s) 592
EcoT14I CCWWGG 2 cut(s) 933, 1065
EcoT38I GRGCYC 3 cut(s) 216, 510, 852
ErhI CCWWGG 2 cut(s) 933, 1065
FaeI CATG 6 cut(s) 86, 185, 809, 862, 1090, 1153
FalI AAGNNNNNCTT 4 cut(s) 390, 422, 1151, 1183
FaqI GGGAC 2 cut(s) 722, 1031
FatI CATG 6 cut(s) 82, 181, 805, 858, 1086, 1149
FauI CCCGC 1 cut(s) 887
FauNDI CATATG 1 cut(s) 772
Fnu4HI GCNGC 4 cut(s) 297, 948, 1018, 1236
FokI GGATG 4 cut(s) 350, 841, 950, 1301
FriOI GRGCYC 3 cut(s) 216, 510, 852
Fsp4HI GCNGC 4 cut(s) 297, 948, 1018, 1236
FspBI CTAG 2 cut(s) 111, 1125
GlaI GCGC 3 cut(s) 193, 602, 974
GluI GCNGC 4 cut(s) 297, 948, 1018, 1236
GsaI CCCAGC 2 cut(s) 39, 64
GsuI CTGGAG 1 cut(s) 189
HaeII RGCGCY 1 cut(s) 604
HaeIII GGCC 2 cut(s) 102, 899
HapII CCGG 1 cut(s) 435
HhaI GCGC 3 cut(s) 194, 603, 975
Hin1II CATG 6 cut(s) 86, 185, 809, 862, 1090, 1153
Hin6I GCGC 3 cut(s) 192, 601, 973
HinP1I GCGC 3 cut(s) 192, 601, 973
HindIII AAGCTT 1 cut(s) 455
HinfI GANTC 3 cut(s) 750, 1008, 1271
HpaII CCGG 1 cut(s) 435
HphI GGTGA 5 cut(s) 146, 823, 932, 1199, 1295
Hpy166II GTNNAC 4 cut(s) 371, 709, 991, 1174
Hpy188I TCNGA 3 cut(s) 684, 909, 1216
Hpy188III TCNNGA 7 cut(s) 77, 209, 441, 608, 724, 964, 1125
Hpy8I GTNNAC 4 cut(s) 371, 709, 991, 1174
HpyAV CCTTC 7 cut(s) 154, 163, 790, 853, 1196, 1240, 1274
HpyCH4III ACNGT 7 cut(s) 74, 220, 469, 518, 839, 917, 1042
HpyCH4IV ACGT 2 cut(s) 711, 924
HpyCH4V TGCA 7 cut(s) 12, 387, 597, 776, 1072, 1086, 1174
HpyF10VI GCNNNNNNNGC 6 cut(s) 57, 360, 797, 953, 1163, 1274
HpyF3I CTNAG 4 cut(s) 267, 654, 683, 1113
HpySE526I ACGT 2 cut(s) 711, 924
Hsp92II CATG 6 cut(s) 86, 185, 809, 862, 1090, 1153
HspAI GCGC 3 cut(s) 192, 601, 973
Kzo9I GATC 7 cut(s) 18, 39, 205, 346, 1089, 1144, 1228
LguI GCTCTTC 1 cut(s) 263
LmnI GCTCC 2 cut(s) 64, 170
Lsp1109I GCAGC 2 cut(s) 283, 1222
LweI GCATC 4 cut(s) 130, 283, 372, 1029
MaeI CTAG 2 cut(s) 111, 1125
MaeII ACGT 2 cut(s) 711, 924
MaeIII GTNAC 4 cut(s) 113, 712, 872, 920
MalI GATC 7 cut(s) 20, 41, 207, 348, 1091, 1146, 1230
MboI GATC 7 cut(s) 18, 39, 205, 346, 1089, 1144, 1228
MboII GAAGA 5 cut(s) 148, 250, 302, 1268, 1310
MflI RGATCY 2 cut(s) 39, 1228
MhlI GDGCHC 5 cut(s) 216, 510, 700, 852, 1176
MlsI TGGCCA 1 cut(s) 102
MluCI AATT 2 cut(s) 719, 1128
MluNI TGGCCA 1 cut(s) 102
MlyI GAGTC 1 cut(s) 1280
Mox20I TGGCCA 1 cut(s) 102
MscI TGGCCA 1 cut(s) 102
MseI TTAA 1 cut(s) 702
MslI CAYNNNNRTG 2 cut(s) 552, 1179
Msp20I TGGCCA 1 cut(s) 102
MspA1I CMGCKG 2 cut(s) 950, 1277
MspI CCGG 1 cut(s) 435
MspR9I CCNGG 3 cut(s) 44, 542, 1050
Mva1269I GAATGC 2 cut(s) 87, 949
MvaI CCWGG 3 cut(s) 44, 542, 1050
MvnI CGCG 1 cut(s) 192
MwoI GCNNNNNNNGC 6 cut(s) 57, 360, 797, 953, 1163, 1274
NdeI CATATG 1 cut(s) 772
NdeII GATC 7 cut(s) 18, 39, 205, 346, 1089, 1144, 1228
NlaIII CATG 6 cut(s) 86, 185, 809, 862, 1090, 1153
NlaIV GGNNCC 6 cut(s) 41, 404, 433, 697, 738, 1267
NmeAIII GCCGAG 1 cut(s) 1294
NmuCI GTSAC 4 cut(s) 113, 712, 872, 920
NspI RCATGY 1 cut(s) 185
PciSI GCTCTTC 1 cut(s) 263
PctI GAATGC 2 cut(s) 87, 949
PfeI GAWTC 2 cut(s) 750, 1008
PfoI TCCNGGA 1 cut(s) 540
PkrI GCNGC 4 cut(s) 298, 949, 1019, 1237
PleI GAGTC 1 cut(s) 1279
PpsI GAGTC 1 cut(s) 1279
PshAI GACNNNNGTC 1 cut(s) 996
Psp6I CCWGG 3 cut(s) 42, 540, 1048
PspFI CCCAGC 2 cut(s) 35, 60
PspGI CCWGG 3 cut(s) 42, 540, 1048
PspN4I GGNNCC 6 cut(s) 41, 404, 433, 697, 738, 1267
PspPI GGNCC 2 cut(s) 358, 736
PstI CTGCAG 1 cut(s) 599
PsuI RGATCY 2 cut(s) 39, 1228
RsaI GTAC 4 cut(s) 803, 914, 930, 1307
RsaNI GTAC 4 cut(s) 802, 913, 929, 1306
RseI CAYNNNNRTG 2 cut(s) 552, 1179
SapI GCTCTTC 1 cut(s) 263
SaqAI TTAA 1 cut(s) 702
SatI GCNGC 4 cut(s) 297, 948, 1018, 1236
Sau3AI GATC 7 cut(s) 18, 39, 205, 346, 1089, 1144, 1228
Sau96I GGNCC 2 cut(s) 358, 736
ScaI AGTACT 1 cut(s) 1307
SchI GAGTC 1 cut(s) 1280
ScrFI CCNGG 3 cut(s) 44, 542, 1050
SduI GDGCHC 5 cut(s) 216, 510, 700, 852, 1176
SfaNI GCATC 4 cut(s) 130, 283, 372, 1029
SfcI CTRYAG 1 cut(s) 595
SinI GGWCC 2 cut(s) 358, 736
SmiMI CAYNNNNRTG 2 cut(s) 552, 1179
SmlI CTYRAG 3 cut(s) 77, 209, 1241
SmoI CTYRAG 3 cut(s) 77, 209, 1241
Sse9I AATT 2 cut(s) 719, 1128
SsiI CCGC 8 cut(s) 250, 361, 643, 791, 880, 948, 1017, 1275
SspMI CTAG 2 cut(s) 111, 1125
StyD4I CCNGG 3 cut(s) 42, 540, 1048
StyI CCWWGG 2 cut(s) 933, 1065
TaaI ACNGT 7 cut(s) 74, 220, 469, 518, 839, 917, 1042
TaiI ACGT 2 cut(s) 714, 927
TaqI TCGA 3 cut(s) 17, 846, 1100
TaqII GACCGA 1 cut(s) 17
TasI AATT 2 cut(s) 719, 1128
TatI WGTACW 1 cut(s) 1305
TauI GCSGC 2 cut(s) 950, 1020
TfiI GAWTC 2 cut(s) 750, 1008
Tru1I TTAA 1 cut(s) 702
Tru9I TTAA 1 cut(s) 702
TscAI CASTG 8 cut(s) 166, 223, 394, 472, 523, 844, 1111, 1181
TseFI GTSAC 4 cut(s) 113, 712, 872, 920
TseI GCWGC 2 cut(s) 296, 1235
Tsp45I GTSAC 4 cut(s) 113, 712, 872, 920
TspDTI ATGAA 3 cut(s) 243, 822, 1269
TspGWI ACGGA 1 cut(s) 356
TspRI CASTG 8 cut(s) 166, 223, 394, 472, 523, 844, 1111, 1181
VneI GTGCAC 1 cut(s) 1172
VpaK11BI GGWCC 2 cut(s) 358, 736
XagI CCTNNNNNAGG 2 cut(s) 1064, 1244
XapI RAATTY 1 cut(s) 719
XbaI TCTAGA 1 cut(s) 1124
XceI RCATGY 1 cut(s) 185
XcmI CCANNNNNNNNNTGG 1 cut(s) 985
XspI CTAG 2 cut(s) 111, 1125
ZrmI AGTACT 1 cut(s) 1307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.