Rw6G003920

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
6386400 .. 6388763
2364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G003920.1

Sequence Viewer

Length: 1320 bp
ATGAGAGAGTGCATTTCGATCCACATCGGTCAGGCCGGTATTCAGGTCGGCAATGCCTGCTGGGAGCTTTATTGCCTTGAGCATGGTATCCAGCCTGATGGCCAAATGCCAAGTGACAAGACTGTAGGCGGAGGAGACGATGCCTTCAACACCTTTTTCAGTGAAACTGGTGCCGGGAAGCATGTCCCTCGCGCAATCTTTGTTGATCTCGAGCCCACAGTTATTGATGAAGTGAGGACTGGAACCTACCGCCAGCTCTTCCACCCTGAGCAGCTCATCAGCGGCAAGGAAGATGCTGCCAACAACTTTGCCAGAGGTCACTATACCATTGGCAAGGAGATTGTTGATCTCTGCTTGGACCGCATCAGGAAACTCGCTGACAACTGCACTGGTCTGCAAGGGTTCCTGGTCTTCAATGCTGTAGGTGGAGGCACTGGCTCCGGGCTTGGATCCCTTCTGTTGGAGCGTTTGTCTGTTGACTATGGAAAGAAGTCAAAGCTTGGGTTTACTGTGTACCCCTCTCCACAGGTTTCTACCTCTGTGGTTGAGCCCTACAACAGTGTACTCTCAACCCACTCCCTCCTGGAGCACACAGATGTTGCTGTTCTCCTTGACAATGAGGCAATCTATGATATCTGCAGGCGCTCTCTTGACATTGAGCGACCCACCTACACAAACCTCAACCGACTTGTATCTCAGGTCATTTCCTCTTTGACTGCCTCCTTGAGGTTTGACGGTGCTCTCAATGTGGATGTTACTGAGTTCCAGACCAACTTGGTTCCCTACCCCAGAATCCACTTTATGCTTTCTTCCTATGCACCTGTCATCTCTGCTGAGAAGGCTTACCATGAACAGCTCTCTGTGGCTGAGATCACCAACAGTGCTTTTGAGCCCTCATCTATGATGGCCAAGTGCGATCCTCGCCATGGAAATACATGGCTTGCTGACGTGAATGCTGCTGTTGCCACCATCAAGACAAAGCGCACAATTCAATTTGTTGACTGGTGCCCTACCGGATTCAAGTGCGGTATCAACTACCAGCCACCCACTGTTGTCCCTGGAGGTGACCTTGCCAAGGTGCAGAGGGCTGTCTGCATGATCTCCAACTCAACCAGTGTTGCTGAGGTCTTCTCAAGAATTGACCACAAGTTTGATCTCATGTATGCCAAGCGTGCTTTCGTGCACTGGTACGTGGGTGAGGGTATGGAGGAAGGTGAGTTCTCTGAGGCCCGTGAGGATCTTGCCGCCCTCGAGAAGGATTATGAAGAGGTTGGTGCCGAGTCTGCTGAGGGCGATGATGATGAAGGGGATGAGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

439

Amino Acids

48.3

Weight (kDa)

4.83

Isoelectric Point (pI)

33.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tubulin PF00091 3 - 213 8.9e-63 Tubulin/FtsZ family, GTPase domain
Tubulin_C PF03953 263 - 381 3.6e-36 Tubulin C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000549)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04820 AT1G50010 AT4G14960 AT4G14960
fragaria_vesca FvH4_1g18660 FvH4_2g03140 FvH4_5g33560 FvH4_6g48940 FvH4_6g48940
malus_domestica MD02G1204800.v1.1 MD05G1106800.v1.1 MD08G1210600.v1.1 MD09G1049500.v1.1 MD10G1111600.v1.1 MD15G1398700.v1.1 MD17G1049700.v1.1
prunus_persica Prupe.1G542600_v2.0.a1 Prupe.3G269300_v2.0.a1 Prupe.6G212700_v2.0.a1 Prupe.8G150900_v2.0.a1
pyrus_communis pycom05g10370 pycom08g18150 pycom10g09640 pycom10g09660 pycom111g04050 pycom15g35470 pycom17g04460
rosa_chinensis RchiOBHm_Chr2g0109481 RchiOBHm_Chr2g0168751 RchiOBHm_Chr3g0453071 RchiOBHm_Chr3g0460741 RchiOBHm_Chr3g0467971 RchiOBHm_Chr4g0400901 RchiOBHm_Chr6g0248011 RchiOBHm_Chr7g0232381 RchiOBHm_Chr7g0238121
rosa_laevigata RLG00000001350 RLG00000009167 RLG00000015163 RLG00000017708 RLG00000017741 RLG00000021807 RLG00000023849 RLG00000026518
rosa_multiflora Rmu_sc0000332.1_g000021 Rmu_sc0000332.1_g000029 Rmu_sc0002416.1_g000007 Rmu_sc0002611.1_g000001 Rmu_sc0003113.1_g000016 Rmu_sc0004780.1_g000001 Rmu_sc0004805.1_g000035 Rmu_sc0010633.1_g000010 Rmu_sc0011069.1_g000003 Rmu_sc0016170.1_g000002 Rmu_sc0025757.1_g000003 Rmu_ssc0000484.1_g000003
rosa_roxburghii Rroxscaffold_2G00134200 Rroxscaffold_4G00321030 Rroxscaffold_7G00213500
rosa_rugosa Rorug01G0283100 Rorug02G0160500 Rorug02G0535300 Rorug04G0027000 Rorug04G0328100 Rorug05G0388700 Rorug05G0530200 Rorug06G0489200 Rorug07G0104900 Rorug07G0209400 Rorug07G0274500
rosa_samantha Rh2BG222800 Rh2BG618900 Rh2CG214400 Rh2CG587200 Rh6BG040200 Rh6CG206500 Rh6DG035600 Rh7BG401600 Rh7BG401700 Rh7DG418400
rosa_wichuraiana Rw2G050240 Rw6G003920 Rw7G035430

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 170, 1005, 1274
AccII CGCG 1 cut(s) 192
AciI CCGC 6 cut(s) 129, 250, 282, 361, 1026, 1245
AclWI GGATC 5 cut(s) 13, 444, 457, 911, 1245
AcoI YGGCCR 2 cut(s) 100, 906
AfaI GTAC 4 cut(s) 515, 564, 1190, 1316
AfiI CCNNNNNNNGG 5 cut(s) 460, 726, 926, 1075, 1255
AgsI TTSAA 4 cut(s) 148, 415, 992, 1021
AjiI CACGTC 1 cut(s) 949
AjnI CCWGG 3 cut(s) 405, 582, 1057
AjuI GAANNNNNNNTTGG 2 cut(s) 1160, 1192
AloI GAACNNNNNNTCC 2 cut(s) 1202, 1234
AluBI AGCT 5 cut(s) 67, 256, 274, 499, 856
AluI AGCT 5 cut(s) 67, 256, 274, 499, 856
Alw21I GWGCWC 3 cut(s) 591, 742, 1185
Alw26I GTCTC 1 cut(s) 129
Alw44I GTGCAC 1 cut(s) 1181
AlwI GGATC 5 cut(s) 13, 444, 457, 911, 1245
Ama87I CYCGRG 2 cut(s) 209, 1250
AoxI GGCC 4 cut(s) 33, 100, 906, 1227
ApaLI GTGCAC 1 cut(s) 1181
ApeKI GCWGC 3 cut(s) 271, 296, 956
ArsI GACNNNNNNTTYG 2 cut(s) 1133, 1165
AspLEI GCGC 3 cut(s) 194, 645, 984
AspS9I GGNCC 2 cut(s) 358, 1228
AsuC2I CCSGG 2 cut(s) 175, 442
AsuHPI GGTGA 4 cut(s) 865, 1076, 1208, 1226
AvaI CYCGRG 2 cut(s) 209, 1250
AvaII GGWCC 1 cut(s) 358
BaeGI GKGCMC 2 cut(s) 1010, 1185
BaeI ACNNNNGTAYC 2 cut(s) 1180, 1213
BalI TGGCCA 2 cut(s) 102, 908
BamHI GGATCC 1 cut(s) 449
BanI GGYRCC 3 cut(s) 170, 1005, 1274
BanII GRGCYC 3 cut(s) 216, 552, 894
BbsI GAAGAC 2 cut(s) 403, 1120
Bbv12I GWGCWC 3 cut(s) 591, 742, 1185
BbvCI CCTCAGC 2 cut(s) 1122, 1287
BbvI GCAGC 3 cut(s) 283, 283, 943
BccI CCATC 3 cut(s) 92, 898, 977
BcgI CGANNNNNNTGC 2 cut(s) 170, 204
BciT130I CCWGG 3 cut(s) 407, 584, 1059
BciVI GTATCC 1 cut(s) 98
BcnI CCSGG 2 cut(s) 175, 442
BcoDI GTCTC 1 cut(s) 129
BfmI CTRYAG 3 cut(s) 123, 420, 637
BfoI RGCGCY 1 cut(s) 646
BfuI GTATCC 1 cut(s) 98
BisI GCNGC 5 cut(s) 272, 283, 297, 957, 1245
BlsI GCNGC 5 cut(s) 273, 284, 298, 958, 1246
BmcAI AGTACT 1 cut(s) 1316
Bme1390I CCNGG 5 cut(s) 175, 407, 442, 584, 1059
Bme18I GGWCC 1 cut(s) 358
BmeT110I CYCGRG 2 cut(s) 209, 1250
BmgBI CACGTC 1 cut(s) 949
BmgT120I GGNCC 2 cut(s) 358, 1228
BmiI GGNNCC 8 cut(s) 172, 244, 404, 439, 451, 780, 1007, 1276
BmrFI CCNGG 5 cut(s) 175, 407, 442, 584, 1059
BmsI GCATC 3 cut(s) 130, 283, 372
BpiI GAAGAC 2 cut(s) 403, 1120
BplI GAGNNNNNCTC 2 cut(s) 1115, 1147
BpmI CTGGAG 2 cut(s) 605, 1080
Bpu10I CCTNAGC 3 cut(s) 267, 1122, 1287
BpuEI CTTGAG 3 cut(s) 98, 745, 1117
BpuMI CCSGG 2 cut(s) 175, 442
BsaAI YACGTR 1 cut(s) 1192
BsaBI GATNNNNATC 1 cut(s) 23
BsaJI CCNNGG 3 cut(s) 925, 1057, 1074
BsaWI WCCGGW 1 cut(s) 1013
BsaXI ACNNNNNCTCC 2 cut(s) 455, 485
Bsc4I CCNNNNNNNGG 5 cut(s) 460, 726, 926, 1075, 1255
Bse118I RCCGGY 1 cut(s) 35
Bse1I ACTGG 7 cut(s) 172, 244, 394, 439, 1007, 1113, 1190
Bse3DI GCAATG 1 cut(s) 58
Bse8I GATNNNNATC 1 cut(s) 23
BseBI CCWGG 3 cut(s) 407, 584, 1059
BseDI CCNNGG 3 cut(s) 925, 1057, 1074
BseGI GGATG 2 cut(s) 757, 1315
BseJI GATNNNNATC 1 cut(s) 23
BseLI CCNNNNNNNGG 5 cut(s) 460, 726, 926, 1075, 1255
BseMI GCAATG 1 cut(s) 58
BseMII CTCAG 8 cut(s) 258, 710, 750, 825, 858, 1113, 1215, 1278
BseNI ACTGG 7 cut(s) 172, 244, 394, 439, 1007, 1113, 1190
BseRI GAGGAG 1 cut(s) 147
BseSI GKGCMC 2 cut(s) 1010, 1185
BseXI GCAGC 3 cut(s) 283, 283, 943
BseYI CCCAGC 1 cut(s) 60
BsgI GTGCAG 2 cut(s) 370, 1100
Bsh1236I CGCG 1 cut(s) 192
BshFI GGCC 4 cut(s) 35, 102, 908, 1229
BshNI GGYRCC 3 cut(s) 170, 1005, 1274
BsiHKAI GWGCWC 3 cut(s) 591, 742, 1185
BsiHKCI CYCGRG 2 cut(s) 209, 1250
BsiSI CCGG 4 cut(s) 36, 174, 441, 1014
BslFI GGGAC 2 cut(s) 170, 1040
BslI CCNNNNNNNGG 5 cut(s) 460, 726, 926, 1075, 1255
BsmAI GTCTC 1 cut(s) 129
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 2 cut(s) 170, 1040
BsmI GAATGC 1 cut(s) 958
BsnI GGCC 4 cut(s) 35, 102, 908, 1229
BsoBI CYCGRG 2 cut(s) 209, 1250
Bsp1286I GDGCHC 7 cut(s) 216, 552, 591, 742, 894, 1010, 1185
Bsp143I GATC 9 cut(s) 18, 205, 346, 449, 870, 916, 1098, 1153, 1237
Bsp19I CCATGG 1 cut(s) 925
BspACI CCGC 6 cut(s) 129, 250, 282, 361, 1026, 1245
BspANI GGCC 4 cut(s) 35, 102, 908, 1229
BspCNI CTCAG 8 cut(s) 259, 709, 751, 826, 859, 1114, 1216, 1279
BspFNI CGCG 1 cut(s) 192
BspLI GGNNCC 8 cut(s) 172, 244, 404, 439, 451, 780, 1007, 1276
BspMAI CTGCAG 1 cut(s) 641
BspPI GGATC 5 cut(s) 13, 444, 457, 911, 1245
BspQI GCTCTTC 1 cut(s) 263
BspT107I GGYRCC 3 cut(s) 170, 1005, 1274
BsrDI GCAATG 1 cut(s) 58
BsrFI RCCGGY 1 cut(s) 35
BsrI ACTGG 7 cut(s) 172, 244, 394, 439, 1007, 1113, 1190
BssAI RCCGGY 1 cut(s) 35
BssECI CCNNGG 3 cut(s) 925, 1057, 1074
BssMI GATC 9 cut(s) 18, 205, 346, 449, 870, 916, 1098, 1153, 1237
BssT1I CCWWGG 2 cut(s) 925, 1074
Bst2UI CCWGG 3 cut(s) 407, 584, 1059
Bst4CI ACNGT 7 cut(s) 124, 220, 511, 560, 737, 881, 1051
Bst6I CTCTTC 2 cut(s) 263, 1260
BstAPI GCANNNNNTGC 1 cut(s) 57
BstBAI YACGTR 1 cut(s) 1192
BstC8I GCNNGC 5 cut(s) 58, 254, 641, 942, 1173
BstDEI CTNAG 8 cut(s) 267, 696, 759, 834, 867, 1122, 1224, 1287
BstDSI CCRYGG 1 cut(s) 925
BstEII GGTNACC 1 cut(s) 1064
BstENI CCTNNNNNAGG 3 cut(s) 724, 1073, 1253
BstF5I GGATG 2 cut(s) 757, 1315
BstFNI CGCG 1 cut(s) 192
BstH2I RGCGCY 1 cut(s) 646
BstHHI GCGC 3 cut(s) 194, 645, 984
BstKTI GATC 9 cut(s) 21, 208, 349, 452, 873, 919, 1101, 1156, 1240
BstMAI GTCTC 1 cut(s) 129
BstMBI GATC 9 cut(s) 18, 205, 346, 449, 870, 916, 1098, 1153, 1237
BstMWI GCNNNNNNNGC 7 cut(s) 57, 360, 839, 921, 962, 1172, 1283
BstNI CCWGG 3 cut(s) 407, 584, 1059
BstNSI RCATGY 1 cut(s) 185
BstPI GGTNACC 1 cut(s) 1064
BstSCI CCNGG 5 cut(s) 173, 405, 440, 582, 1057
BstSFI CTRYAG 3 cut(s) 123, 420, 637
BstSLI GKGCMC 2 cut(s) 1010, 1185
BstUI CGCG 1 cut(s) 192
BstV1I GCAGC 3 cut(s) 283, 283, 943
BstV2I GAAGAC 2 cut(s) 403, 1120
BstX2I RGATCY 2 cut(s) 449, 1237
BstXI CCANNNNNNTGG 1 cut(s) 98
BstYI RGATCY 2 cut(s) 449, 1237
BsuI GTATCC 1 cut(s) 98
BsuRI GGCC 4 cut(s) 35, 102, 908, 1229
BtgI CCRYGG 1 cut(s) 925
BtgZI GCGATG 1 cut(s) 1308
BtrI CACGTC 1 cut(s) 949
BtsCI GGATG 2 cut(s) 757, 1315
BtsIMutI CAGTG 8 cut(s) 166, 387, 432, 565, 886, 1047, 1120, 1183
Cac8I GCNNGC 5 cut(s) 58, 254, 641, 942, 1173
CfoI GCGC 3 cut(s) 194, 645, 984
Cfr10I RCCGGY 1 cut(s) 35
Cfr13I GGNCC 2 cut(s) 358, 1228
Csp6I GTAC 4 cut(s) 514, 563, 1189, 1315
CspCI CAANNNNNGTGG 2 cut(s) 205, 240
CviAII CATG 7 cut(s) 83, 182, 848, 926, 936, 1096, 1159
CviQI GTAC 4 cut(s) 514, 563, 1189, 1315
DdeI CTNAG 8 cut(s) 267, 696, 759, 834, 867, 1122, 1224, 1287
DpnI GATC 9 cut(s) 20, 207, 348, 451, 872, 918, 1100, 1155, 1239
DpnII GATC 9 cut(s) 18, 205, 346, 449, 870, 916, 1098, 1153, 1237
EaeI YGGCCR 2 cut(s) 100, 906
Eam1104I CTCTTC 2 cut(s) 263, 1260
EarI CTCTTC 2 cut(s) 263, 1260
EciI GGCGGA 1 cut(s) 144
Eco130I CCWWGG 2 cut(s) 925, 1074
Eco24I GRGCYC 3 cut(s) 216, 552, 894
Eco32I GATATC 1 cut(s) 634
Eco47I GGWCC 1 cut(s) 358
Eco88I CYCGRG 2 cut(s) 209, 1250
Eco91I GGTNACC 1 cut(s) 1064
EcoNI CCTNNNNNAGG 3 cut(s) 724, 1073, 1253
EcoO65I GGTNACC 1 cut(s) 1064
EcoRII CCWGG 3 cut(s) 405, 582, 1057
EcoRV GATATC 1 cut(s) 634
EcoT14I CCWWGG 2 cut(s) 925, 1074
EcoT38I GRGCYC 3 cut(s) 216, 552, 894
ErhI CCWWGG 2 cut(s) 925, 1074
Esp3I CGTCTC 1 cut(s) 129
FaeI CATG 7 cut(s) 86, 185, 851, 929, 939, 1099, 1162
FaqI GGGAC 2 cut(s) 170, 1040
FatI CATG 7 cut(s) 82, 181, 847, 925, 935, 1095, 1158
Fnu4HI GCNGC 5 cut(s) 272, 283, 297, 957, 1245
FokI GGATG 1 cut(s) 764
FriOI GRGCYC 3 cut(s) 216, 552, 894
Fsp4HI GCNGC 5 cut(s) 272, 283, 297, 957, 1245
GlaI GCGC 3 cut(s) 193, 644, 983
GluI GCNGC 5 cut(s) 272, 283, 297, 957, 1245
GsaI CCCAGC 1 cut(s) 64
GsuI CTGGAG 2 cut(s) 605, 1080
HaeII RGCGCY 1 cut(s) 646
HaeIII GGCC 4 cut(s) 35, 102, 908, 1229
HapII CCGG 4 cut(s) 36, 174, 441, 1014
HhaI GCGC 3 cut(s) 194, 645, 984
Hin1II CATG 7 cut(s) 86, 185, 851, 929, 939, 1099, 1162
Hin6I GCGC 3 cut(s) 192, 643, 982
HinP1I GCGC 3 cut(s) 192, 643, 982
HincII GTYRAC 2 cut(s) 478, 1000
HindII GTYRAC 2 cut(s) 478, 1000
HindIII AAGCTT 1 cut(s) 497
HinfI GANTC 3 cut(s) 792, 1017, 1280
HpaII CCGG 4 cut(s) 36, 174, 441, 1014
HphI GGTGA 4 cut(s) 865, 1076, 1208, 1226
Hpy166II GTNNAC 6 cut(s) 478, 507, 514, 563, 1000, 1183
Hpy188I TCNGA 1 cut(s) 1225
Hpy188III TCNNGA 7 cut(s) 209, 367, 650, 766, 973, 1134, 1252
Hpy8I GTNNAC 6 cut(s) 478, 507, 514, 563, 1000, 1183
HpyAV CCTTC 6 cut(s) 154, 464, 832, 1205, 1249, 1298
HpyCH4III ACNGT 7 cut(s) 124, 220, 511, 560, 737, 881, 1051
HpyCH4IV ACGT 2 cut(s) 948, 1191
HpyCH4V TGCA 8 cut(s) 12, 387, 397, 639, 818, 1081, 1095, 1183
HpyF10VI GCNNNNNNNGC 7 cut(s) 57, 360, 839, 921, 962, 1172, 1283
HpyF3I CTNAG 8 cut(s) 267, 696, 759, 834, 867, 1122, 1224, 1287
HpySE526I ACGT 2 cut(s) 948, 1191
Hsp92II CATG 7 cut(s) 86, 185, 851, 929, 939, 1099, 1162
HspAI GCGC 3 cut(s) 192, 643, 982
Kzo9I GATC 9 cut(s) 18, 205, 346, 449, 870, 916, 1098, 1153, 1237
LguI GCTCTTC 1 cut(s) 263
LmnI GCTCC 4 cut(s) 64, 443, 463, 586
Lsp1109I GCAGC 3 cut(s) 283, 283, 943
LweI GCATC 3 cut(s) 130, 283, 372
MaeII ACGT 2 cut(s) 948, 1191
MaeIII GTNAC 4 cut(s) 113, 317, 754, 1064
MalI GATC 9 cut(s) 20, 207, 348, 451, 872, 918, 1100, 1155, 1239
MboI GATC 9 cut(s) 18, 205, 346, 449, 870, 916, 1098, 1153, 1237
MboII GAAGA 6 cut(s) 250, 302, 403, 801, 1120, 1277
MflI RGATCY 2 cut(s) 449, 1237
MhlI GDGCHC 7 cut(s) 216, 552, 591, 742, 894, 1010, 1185
MlsI TGGCCA 2 cut(s) 102, 908
MluCI AATT 3 cut(s) 987, 992, 1137
MluNI TGGCCA 2 cut(s) 102, 908
MlyI GAGTC 1 cut(s) 1289
MmeI TCCRAC 2 cut(s) 441, 1128
Mox20I TGGCCA 2 cut(s) 102, 908
MscI TGGCCA 2 cut(s) 102, 908
MslI CAYNNNNRTG 1 cut(s) 594
Msp20I TGGCCA 2 cut(s) 102, 908
MspA1I CMGCKG 1 cut(s) 282
MspI CCGG 4 cut(s) 36, 174, 441, 1014
MspR9I CCNGG 5 cut(s) 175, 407, 442, 584, 1059
Mva1269I GAATGC 1 cut(s) 958
MvaI CCWGG 3 cut(s) 407, 584, 1059
MvnI CGCG 1 cut(s) 192
MwoI GCNNNNNNNGC 7 cut(s) 57, 360, 839, 921, 962, 1172, 1283
NciI CCSGG 2 cut(s) 175, 442
NcoI CCATGG 1 cut(s) 925
NdeII GATC 9 cut(s) 18, 205, 346, 449, 870, 916, 1098, 1153, 1237
NlaIII CATG 7 cut(s) 86, 185, 851, 929, 939, 1099, 1162
NlaIV GGNNCC 8 cut(s) 172, 244, 404, 439, 451, 780, 1007, 1276
NmeAIII GCCGAG 1 cut(s) 1303
NmuCI GTSAC 3 cut(s) 113, 317, 1064
NspI RCATGY 1 cut(s) 185
PaeR7I CTCGAG 2 cut(s) 209, 1250
PciSI GCTCTTC 1 cut(s) 263
PctI GAATGC 1 cut(s) 958
PfeI GAWTC 2 cut(s) 792, 1017
PfoI TCCNGGA 1 cut(s) 582
PkrI GCNGC 5 cut(s) 273, 284, 298, 958, 1246
PleI GAGTC 1 cut(s) 1288
PpsI GAGTC 1 cut(s) 1288
Ppu21I YACGTR 1 cut(s) 1192
Psp6I CCWGG 3 cut(s) 405, 582, 1057
PspEI GGTNACC 1 cut(s) 1064
PspFI CCCAGC 1 cut(s) 60
PspGI CCWGG 3 cut(s) 405, 582, 1057
PspN4I GGNNCC 8 cut(s) 172, 244, 404, 439, 451, 780, 1007, 1276
PspPI GGNCC 2 cut(s) 358, 1228
PstI CTGCAG 1 cut(s) 641
PsuI RGATCY 2 cut(s) 449, 1237
RsaI GTAC 4 cut(s) 515, 564, 1190, 1316
RsaNI GTAC 4 cut(s) 514, 563, 1189, 1315
RseI CAYNNNNRTG 1 cut(s) 594
SapI GCTCTTC 1 cut(s) 263
SatI GCNGC 5 cut(s) 272, 283, 297, 957, 1245
Sau3AI GATC 9 cut(s) 18, 205, 346, 449, 870, 916, 1098, 1153, 1237
Sau96I GGNCC 2 cut(s) 358, 1228
ScaI AGTACT 1 cut(s) 1316
SchI GAGTC 1 cut(s) 1289
ScrFI CCNGG 5 cut(s) 175, 407, 442, 584, 1059
SduI GDGCHC 7 cut(s) 216, 552, 591, 742, 894, 1010, 1185
SfaNI GCATC 3 cut(s) 130, 283, 372
SfcI CTRYAG 3 cut(s) 123, 420, 637
Sfr274I CTCGAG 2 cut(s) 209, 1250
SinI GGWCC 1 cut(s) 358
SlaI CTCGAG 2 cut(s) 209, 1250
SmiMI CAYNNNNRTG 1 cut(s) 594
SmlI CTYRAG 5 cut(s) 77, 209, 724, 1132, 1250
SmoI CTYRAG 5 cut(s) 77, 209, 724, 1132, 1250
Sse9I AATT 3 cut(s) 987, 992, 1137
SsiI CCGC 6 cut(s) 129, 250, 282, 361, 1026, 1245
StyD4I CCNGG 5 cut(s) 173, 405, 440, 582, 1057
StyI CCWWGG 2 cut(s) 925, 1074
TaaI ACNGT 7 cut(s) 124, 220, 511, 560, 737, 881, 1051
TaiI ACGT 2 cut(s) 951, 1194
TaqI TCGA 3 cut(s) 17, 210, 1251
TaqII GACCGA 1 cut(s) 17
TasI AATT 3 cut(s) 987, 992, 1137
TatI WGTACW 2 cut(s) 562, 1314
TauI GCSGC 2 cut(s) 285, 1247
TfiI GAWTC 2 cut(s) 792, 1017
TscAI CASTG 8 cut(s) 166, 394, 439, 565, 886, 1054, 1120, 1190
TseFI GTSAC 3 cut(s) 113, 317, 1064
TseI GCWGC 3 cut(s) 271, 296, 956
Tsp45I GTSAC 3 cut(s) 113, 317, 1064
TspDTI ATGAA 4 cut(s) 243, 864, 1278, 1317
TspRI CASTG 8 cut(s) 166, 394, 439, 565, 886, 1054, 1120, 1190
VneI GTGCAC 1 cut(s) 1181
VpaK11BI GGWCC 1 cut(s) 358
XagI CCTNNNNNAGG 3 cut(s) 724, 1073, 1253
XceI RCATGY 1 cut(s) 185
XhoI CTCGAG 2 cut(s) 209, 1250
ZrmI AGTACT 1 cut(s) 1316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.