MD14G1165400.v1.1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000602
Physical Location & Seq
Reverse (-)
25910380 .. 25914768
4389 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1165400.v1.1.491

Sequence Viewer

Length: 1707 bp
ATGCCTCTGAAAAAAGCAGACTTTGACTTGGCCAGTCAAAATATATTTTTATCATATGAGAGAGTTTGTTTCCTCCATAATGTAGTTGCTAGTTGCAAATTCACAGCAAAACCTAGCAACCCAGTTTCAGCTACCGTCGCCGCCGCATCCGCCGCCGCCATCAGCACAAAAACTATGTTGTCAGCGGCGCGTTTCCTCCTACCGTTGTCACTGTCAGTGCTGGTCGCAATTTATAATTACTATAAATCCAGACAGAAATCGGAATTTTCTGAAGGCGTCGGAGTTCCGCTAAATCCGACGTCTGTTCCGTCTCCTGCGCCATCCGATCGCTACCATGAAATCCTTCATTGGATTCGGACACTCGACACACTCGACCCCGCCTTGCTCAATAGGATTAGGAATCGCGACCCTGCCCTCCTCCATGAGATTCAGCAATTCGACCCCGCCGTTGAGATTCGCAACTTCGATCCTTCCATCGTTGATGAGATTCGGAACTTGGACCCTGCTATCCCTTCGGAATTTTCTGAAAGCGTAGGCGTTGCTCAAAATCCCCCGTCTGTTCCGTCTCCTGAGCCGTCCGTTGTTGAAATCCTTGATTGGATTGGGACACTCGGCCCCGCCGTGCTCGATGAGATTCAGCAATTCGACCCCGCCTTCCTCGATGAGGATCGGAGCTTCGATCCTTCCATCGTTGATGGGATTCGGAAATTGAGTTTGAAGGAAAAGGAGGATAAAGCAGAAGAGGAGGAGAAGGAGAGAGAGACTGAAAAGGAAAAGGAAAATGAGAAGGAGAGAGAGAGGGAAAAGAGCGAAAGCAGCAGCAGCGTCTGCGGCAGCGGAGGAGGGAATGAGAATGGCGGTGGGGTGGAGGAGGAGGTTGTTGGGGAGAGTAGCAGAAGGAATCAGTACCCATTGAGGCCGGAAGGTGGGGACTGTCGGTACGATCTGAAGACTGGCAATTGTAAGTTCGGGTCGAATCGCAAGAATAATCACCCTCGGAGAAGGAAAAACAAGCAGGTGCCCAAGGAAAGCGTCAAGGATATGGACGAGTCGGCAGAGAATCCAAGCCAGACGGAATGCAAGTATTACTTGAGGTCGGGTGGATGTAAGCATGGGGAAAATTGCAGATACAGCCACAGCAAAGGGAAGCTTGAGCTTAACTTTCTGGGCCTGCCAATTCGACCGGGTAAAAGGGAGTGTCCGTACTATATGCAAAATGGCTCCTGCAAGTATGCATCGAACTGCAGGTTTAACCACCCTGATCCGACAGCTACAGGAGGATCTGATCCCCCATCTGGATATGGTAATGGTGGTCCTGCATCTTTACAAGGTGCATCACAATCAACAGTGGCACCATGGTCTGCACCAAGGCCATTGAATGAGGATCCGGTTTACTCGACACTGATGATTCCACCACCTCAAGTAGTTTCTTCTCAAAATTCAGAATGGAATGGTTATCAGGCTTCCGCATATGCACCCGAAAGAAGCATGCCTGCGCGTCCGCCATACATGATGAACAACTCAGTGGCTGAAACCAACGTCTACAGGCAACATCCACACCAGAATCAAGTTGAAGAGTTCCCAGAACGACCTGGCCAACCCTTATGCAGTTATTTCTTAAGAAAGGGTGTTTGCAAGTTTAAATCTAAGTGCAAATATCACCATCCAAAAACTCACCGCAGTAGGCCCCCCAATCGCACTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

569

Amino Acids

63.34

Weight (kDa)

6.7

Isoelectric Point (pI)

57.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 357 - 381 8.2e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 396 - 420 1.2e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 531 - 557 9e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 234
AarI CACCTGC 1 cut(s) 1006
AatII GACGTC 1 cut(s) 302
Acc36I ACCTGC 2 cut(s) 1006, 1236
AccB1I GGYRCC 2 cut(s) 1018, 1351
AccI GTMKAC 1 cut(s) 1542
AccII CGCG 3 cut(s) 190, 405, 1498
AclWI GGATC 8 cut(s) 461, 674, 675, 1256, 1280, 1288, 1379, 1392
AcoI YGGCCR 2 cut(s) 30, 1594
AcsI RAATTY 4 cut(s) 98, 263, 518, 1438
AcuI CTGAAG 2 cut(s) 291, 968
AcyI GRCGYC 2 cut(s) 276, 299
AdeI CACNNNGTG 1 cut(s) 1704
AfaI GTAC 3 cut(s) 908, 941, 1205
AfiI CCNNNNNNNGG 3 cut(s) 664, 926, 1295
AflII CTTAAG 1 cut(s) 1618
AgsI TTSAA 4 cut(s) 587, 718, 1378, 1574
AjnI CCWGG 1 cut(s) 1591
AluBI AGCT 5 cut(s) 131, 675, 1150, 1156, 1271
AluI AGCT 5 cut(s) 131, 675, 1150, 1156, 1271
Alw21I GWGCWC 1 cut(s) 627
Alw26I GTCTC 3 cut(s) 315, 570, 755
AlwI GGATC 8 cut(s) 461, 674, 675, 1256, 1280, 1288, 1379, 1392
AlwNI CAGNNNCTG 2 cut(s) 828, 1529
AoxI GGCC 7 cut(s) 30, 613, 917, 1168, 1370, 1594, 1685
ApeKI GCWGC 4 cut(s) 816, 819, 822, 834
ApoI RAATTY 4 cut(s) 98, 263, 518, 1438
Asp700I GAANNNNTTC 1 cut(s) 342
AspLEI GCGC 3 cut(s) 190, 319, 1498
AspS9I GGNCC 5 cut(s) 499, 614, 1168, 1313, 1686
AsuC2I CCSGG 1 cut(s) 1185
AsuHPI GGTGA 3 cut(s) 983, 1652, 1667
AvaII GGWCC 2 cut(s) 499, 1313
BaeGI GKGCMC 1 cut(s) 1023
BalI TGGCCA 2 cut(s) 32, 1596
BamHI GGATCC 1 cut(s) 1384
BanI GGYRCC 2 cut(s) 1018, 1351
BbsI GAAGAC 1 cut(s) 956
Bbv12I GWGCWC 1 cut(s) 627
BbvI GCAGC 4 cut(s) 828, 831, 834, 846
BccI CCATC 7 cut(s) 167, 328, 482, 689, 695, 1300, 1671
BceAI ACGGC 3 cut(s) 431, 559, 605
BciT130I CCWGG 1 cut(s) 1593
BcnI CCSGG 1 cut(s) 1185
BcoDI GTCTC 3 cut(s) 315, 570, 755
BfaI CTAG 2 cut(s) 90, 114
BfmI CTRYAG 3 cut(s) 1243, 1272, 1543
BfrI CTTAAG 1 cut(s) 1618
BfuAI ACCTGC 2 cut(s) 1006, 1236
Bme1390I CCNGG 2 cut(s) 1185, 1593
Bme18I GGWCC 2 cut(s) 499, 1313
BmgT120I GGNCC 5 cut(s) 499, 614, 1168, 1313, 1686
BmiI GGNNCC 7 cut(s) 501, 616, 1020, 1222, 1353, 1386, 1688
BmrFI CCNGG 2 cut(s) 1185, 1593
BmrI ACTGGG 1 cut(s) 116
BmsI GCATC 4 cut(s) 155, 1244, 1328, 1343
BmuI ACTGGG 1 cut(s) 116
BpiI GAAGAC 1 cut(s) 956
Bpu10I CCTNAGC 1 cut(s) 570
BpuEI CTTGAG 3 cut(s) 1111, 1172, 1404
BpuMI CCSGG 1 cut(s) 1185
BsaBI GATNNNNATC 1 cut(s) 666
BsaHI GRCGYC 2 cut(s) 276, 299
BsaJI CCNNGG 4 cut(s) 995, 1023, 1355, 1367
BsaWI WCCGGW 1 cut(s) 1387
BsaXI ACNNNNNCTCC 2 cut(s) 1187, 1217
Bsc4I CCNNNNNNNGG 3 cut(s) 664, 926, 1295
Bse1I ACTGG 3 cut(s) 33, 122, 958
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 1 cut(s) 1593
BseDI CCNNGG 4 cut(s) 995, 1023, 1355, 1367
BseGI GGATG 5 cut(s) 146, 320, 1109, 1552, 1663
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 3 cut(s) 664, 926, 1295
BseMII CTCAG 2 cut(s) 561, 1536
BseNI ACTGG 3 cut(s) 33, 122, 958
BseRI GAGGAG 6 cut(s) 407, 758, 761, 855, 884, 887
BseSI GKGCMC 1 cut(s) 1023
BseXI GCAGC 4 cut(s) 828, 831, 834, 846
BsgI GTGCAG 1 cut(s) 1347
Bsh1236I CGCG 3 cut(s) 190, 405, 1498
Bsh1285I CGRYCG 2 cut(s) 328, 1184
BshFI GGCC 7 cut(s) 32, 615, 919, 1170, 1372, 1596, 1687
BshNI GGYRCC 2 cut(s) 1018, 1351
BsiEI CGRYCG 2 cut(s) 328, 1184
BsiHKAI GWGCWC 1 cut(s) 627
BsiSI CCGG 3 cut(s) 920, 1184, 1388
BslFI GGGAC 2 cut(s) 619, 944
BslI CCNNNNNNNGG 3 cut(s) 664, 926, 1295
BsmAI GTCTC 3 cut(s) 315, 570, 755
BsmBI CGTCTC 2 cut(s) 315, 570
BsmFI GGGAC 2 cut(s) 619, 944
BsmI GAATGC 1 cut(s) 1082
BsnI GGCC 7 cut(s) 32, 615, 919, 1170, 1372, 1596, 1687
Bsp1286I GDGCHC 2 cut(s) 627, 1023
Bsp143I GATC 9 cut(s) 325, 466, 667, 679, 943, 1261, 1280, 1285, 1384
Bsp19I CCATGG 1 cut(s) 1355
Bsp68I TCGCGA 1 cut(s) 405
BspANI GGCC 7 cut(s) 32, 615, 919, 1170, 1372, 1596, 1687
BspCNI CTCAG 2 cut(s) 562, 1535
BspFNI CGCG 3 cut(s) 190, 405, 1498
BspLI GGNNCC 7 cut(s) 501, 616, 1020, 1222, 1353, 1386, 1688
BspMAI CTGCAG 1 cut(s) 1247
BspMI ACCTGC 2 cut(s) 1006, 1236
BspPI GGATC 8 cut(s) 461, 674, 675, 1256, 1280, 1288, 1379, 1392
BspT107I GGYRCC 2 cut(s) 1018, 1351
BspTI CTTAAG 1 cut(s) 1618
BsrI ACTGG 3 cut(s) 33, 122, 958
BssECI CCNNGG 4 cut(s) 995, 1023, 1355, 1367
BssMI GATC 9 cut(s) 325, 466, 667, 679, 943, 1261, 1280, 1285, 1384
BssNI GRCGYC 2 cut(s) 276, 299
BssT1I CCWWGG 3 cut(s) 1023, 1355, 1367
Bst2UI CCWGG 1 cut(s) 1593
Bst4CI ACNGT 5 cut(s) 136, 204, 213, 935, 1348
Bst6I CTCTTC 2 cut(s) 735, 1569
BstACI GRCGYC 2 cut(s) 276, 299
BstAFI CTTAAG 1 cut(s) 1618
BstAPI GCANNNNNTGC 1 cut(s) 828
BstC8I GCNNGC 3 cut(s) 1172, 1490, 1494
BstDEI CTNAG 4 cut(s) 570, 1522, 1647, 1701
BstDSI CCRYGG 1 cut(s) 1355
BstENI CCTNNNNNAGG 1 cut(s) 662
BstF5I GGATG 5 cut(s) 146, 320, 1109, 1552, 1663
BstFNI CGCG 3 cut(s) 190, 405, 1498
BstHHI GCGC 3 cut(s) 190, 319, 1498
BstKTI GATC 9 cut(s) 328, 469, 670, 682, 946, 1264, 1283, 1288, 1387
BstMAI GTCTC 3 cut(s) 315, 570, 755
BstMBI GATC 9 cut(s) 325, 466, 667, 679, 943, 1261, 1280, 1285, 1384
BstMCI CGRYCG 2 cut(s) 328, 1184
BstMWI GCNNNNNNNGC 8 cut(s) 137, 149, 152, 816, 822, 828, 831, 1131
BstNI CCWGG 1 cut(s) 1593
BstNSI RCATGY 1 cut(s) 1492
BstSCI CCNGG 2 cut(s) 1183, 1591
BstSFI CTRYAG 3 cut(s) 1243, 1272, 1543
BstSLI GKGCMC 1 cut(s) 1023
BstUI CGCG 3 cut(s) 190, 405, 1498
BstV1I GCAGC 4 cut(s) 828, 831, 834, 846
BstV2I GAAGAC 1 cut(s) 956
BstX2I RGATCY 2 cut(s) 1280, 1384
BstYI RGATCY 2 cut(s) 1280, 1384
BsuRI GGCC 7 cut(s) 32, 615, 919, 1170, 1372, 1596, 1687
BtgI CCRYGG 1 cut(s) 1355
BtsCI GGATG 5 cut(s) 146, 320, 1109, 1552, 1663
BtsIMutI CAGTG 5 cut(s) 209, 222, 1353, 1400, 1530
BtuMI TCGCGA 1 cut(s) 405
BveI ACCTGC 2 cut(s) 1006, 1236
Cac8I GCNNGC 3 cut(s) 1172, 1490, 1494
CaiI CAGNNNCTG 2 cut(s) 828, 1529
CfoI GCGC 3 cut(s) 190, 319, 1498
Cfr13I GGNCC 5 cut(s) 499, 614, 1168, 1313, 1686
CseI GACGC 4 cut(s) 265, 814, 1021, 1487
Csp6I GTAC 3 cut(s) 907, 940, 1204
CviAII CATG 6 cut(s) 335, 422, 1112, 1356, 1489, 1510
CviQI GTAC 3 cut(s) 907, 940, 1204
DdeI CTNAG 4 cut(s) 570, 1522, 1647, 1701
DpnI GATC 9 cut(s) 327, 468, 669, 681, 945, 1263, 1282, 1287, 1386
DpnII GATC 9 cut(s) 325, 466, 667, 679, 943, 1261, 1280, 1285, 1384
DraI TTTAAA 1 cut(s) 1642
DraIII CACNNNGTG 1 cut(s) 1704
EaeI YGGCCR 2 cut(s) 30, 1594
Eam1104I CTCTTC 2 cut(s) 735, 1569
EarI CTCTTC 2 cut(s) 735, 1569
EciI GGCGGA 2 cut(s) 139, 1491
Eco130I CCWWGG 3 cut(s) 1023, 1355, 1367
Eco47I GGWCC 2 cut(s) 499, 1313
Eco57I CTGAAG 2 cut(s) 291, 968
EcoNI CCTNNNNNAGG 1 cut(s) 662
EcoO109I RGGNCCY 1 cut(s) 1686
EcoRII CCWGG 1 cut(s) 1591
EcoT14I CCWWGG 3 cut(s) 1023, 1355, 1367
EcoT22I ATGCAT 1 cut(s) 1237
ErhI CCWWGG 3 cut(s) 1023, 1355, 1367
Esp3I CGTCTC 2 cut(s) 315, 570
FaeI CATG 6 cut(s) 338, 425, 1115, 1359, 1492, 1513
FalI AAGNNNNNCTT 4 cut(s) 1073, 1105, 1134, 1166
FaqI GGGAC 2 cut(s) 619, 944
FatI CATG 6 cut(s) 334, 421, 1111, 1355, 1488, 1509
FauI CCCGC 4 cut(s) 385, 451, 625, 658
FauNDI CATATG 2 cut(s) 55, 1471
FblI GTMKAC 1 cut(s) 1542
FokI GGATG 5 cut(s) 133, 307, 1116, 1539, 1650
FspBI CTAG 2 cut(s) 90, 114
GlaI GCGC 3 cut(s) 189, 318, 1497
HaeIII GGCC 7 cut(s) 32, 615, 919, 1170, 1372, 1596, 1687
HapII CCGG 3 cut(s) 920, 1184, 1388
HgaI GACGC 4 cut(s) 265, 814, 1021, 1487
HhaI GCGC 3 cut(s) 190, 319, 1498
Hin1I GRCGYC 2 cut(s) 276, 299
Hin1II CATG 6 cut(s) 338, 425, 1115, 1359, 1492, 1513
Hin6I GCGC 3 cut(s) 188, 317, 1496
HinP1I GCGC 3 cut(s) 188, 317, 1496
HindIII AAGCTT 1 cut(s) 1148
HpaII CCGG 3 cut(s) 920, 1184, 1388
HphI GGTGA 3 cut(s) 983, 1652, 1667
Hpy166II GTNNAC 2 cut(s) 1393, 1543
Hpy188III TCNNGA 4 cut(s) 249, 404, 569, 1296
Hpy8I GTNNAC 2 cut(s) 1393, 1543
Hpy99I CGWCG 3 cut(s) 140, 281, 301
HpyCH4III ACNGT 5 cut(s) 136, 204, 213, 935, 1348
HpyCH4IV ACGT 2 cut(s) 299, 1539
HpyF10VI GCNNNNNNNGC 8 cut(s) 137, 149, 152, 816, 822, 828, 831, 1131
HpyF3I CTNAG 4 cut(s) 570, 1522, 1647, 1701
HpySE526I ACGT 2 cut(s) 299, 1539
Hsp92I GRCGYC 2 cut(s) 276, 299
Hsp92II CATG 6 cut(s) 338, 425, 1115, 1359, 1492, 1513
HspAI GCGC 3 cut(s) 188, 317, 1496
Kzo9I GATC 9 cut(s) 325, 466, 667, 679, 943, 1261, 1280, 1285, 1384
LmnI GCTCC 2 cut(s) 672, 1226
Lsp1109I GCAGC 4 cut(s) 828, 831, 834, 846
LweI GCATC 4 cut(s) 155, 1244, 1328, 1343
MaeI CTAG 2 cut(s) 90, 114
MaeII ACGT 2 cut(s) 299, 1539
MaeIII GTNAC 1 cut(s) 207
MalI GATC 9 cut(s) 327, 468, 669, 681, 945, 1263, 1282, 1287, 1386
MboI GATC 9 cut(s) 325, 466, 667, 679, 943, 1261, 1280, 1285, 1384
MboII GAAGA 4 cut(s) 752, 961, 1422, 1586
MfeI CAATTG 1 cut(s) 958
MflI RGATCY 2 cut(s) 1280, 1384
MhlI GDGCHC 2 cut(s) 627, 1023
MlsI TGGCCA 2 cut(s) 32, 1596
MluNI TGGCCA 2 cut(s) 32, 1596
MlyI GAGTC 1 cut(s) 1058
MmeI TCCRAC 3 cut(s) 259, 320, 1289
Mox20I TGGCCA 2 cut(s) 32, 1596
Mph1103I ATGCAT 1 cut(s) 1237
MroXI GAANNNNTTC 1 cut(s) 342
MscI TGGCCA 2 cut(s) 32, 1596
MseI TTAA 4 cut(s) 1158, 1251, 1619, 1641
Msp20I TGGCCA 2 cut(s) 32, 1596
MspA1I CMGCKG 2 cut(s) 185, 837
MspCI CTTAAG 1 cut(s) 1618
MspI CCGG 3 cut(s) 920, 1184, 1388
MspR9I CCNGG 2 cut(s) 1185, 1593
MunI CAATTG 1 cut(s) 958
Mva1269I GAATGC 1 cut(s) 1082
MvaI CCWGG 1 cut(s) 1593
MvnI CGCG 3 cut(s) 190, 405, 1498
MwoI GCNNNNNNNGC 8 cut(s) 137, 149, 152, 816, 822, 828, 831, 1131
NciI CCSGG 1 cut(s) 1185
NcoI CCATGG 1 cut(s) 1355
NdeI CATATG 2 cut(s) 55, 1471
NdeII GATC 9 cut(s) 325, 466, 667, 679, 943, 1261, 1280, 1285, 1384
NlaIII CATG 6 cut(s) 338, 425, 1115, 1359, 1492, 1513
NlaIV GGNNCC 7 cut(s) 501, 616, 1020, 1222, 1353, 1386, 1688
NmeAIII GCCGAG 1 cut(s) 591
NmuCI GTSAC 1 cut(s) 207
NruI TCGCGA 1 cut(s) 405
NsiI ATGCAT 1 cut(s) 1237
NspI RCATGY 1 cut(s) 1492
PaeI GCATGC 1 cut(s) 1492
PaqCI CACCTGC 1 cut(s) 1006
PcsI WCGNNNNNNNCGW 4 cut(s) 305, 369, 444, 618
PctI GAATGC 1 cut(s) 1082
PdmI GAANNNNTTC 1 cut(s) 342
Ple19I CGATCG 1 cut(s) 328
PleI GAGTC 1 cut(s) 1057
PpsI GAGTC 1 cut(s) 1057
PsiI TTATAA 1 cut(s) 234
Psp6I CCWGG 1 cut(s) 1591
PspGI CCWGG 1 cut(s) 1591
PspN4I GGNNCC 7 cut(s) 501, 616, 1020, 1222, 1353, 1386, 1688
PspPI GGNCC 5 cut(s) 499, 614, 1168, 1313, 1686
PstI CTGCAG 1 cut(s) 1247
PstNI CAGNNNCTG 2 cut(s) 828, 1529
PsuI RGATCY 2 cut(s) 1280, 1384
PvuI CGATCG 1 cut(s) 328
RruI TCGCGA 1 cut(s) 405
RsaI GTAC 3 cut(s) 908, 941, 1205
RsaNI GTAC 3 cut(s) 907, 940, 1204
SaqAI TTAA 4 cut(s) 1158, 1251, 1619, 1641
Sau3AI GATC 9 cut(s) 325, 466, 667, 679, 943, 1261, 1280, 1285, 1384
Sau96I GGNCC 5 cut(s) 499, 614, 1168, 1313, 1686
SchI GAGTC 1 cut(s) 1058
ScrFI CCNGG 2 cut(s) 1185, 1593
SduI GDGCHC 2 cut(s) 627, 1023
SfaNI GCATC 4 cut(s) 155, 1244, 1328, 1343
SfcI CTRYAG 3 cut(s) 1243, 1272, 1543
SinI GGWCC 2 cut(s) 499, 1313
SmlI CTYRAG 4 cut(s) 1090, 1151, 1419, 1618
SmoI CTYRAG 4 cut(s) 1090, 1151, 1419, 1618
SphI GCATGC 1 cut(s) 1492
SspMI CTAG 2 cut(s) 90, 114
StyD4I CCNGG 2 cut(s) 1183, 1591
StyI CCWWGG 3 cut(s) 1023, 1355, 1367
TaaI ACNGT 5 cut(s) 136, 204, 213, 935, 1348
TaiI ACGT 2 cut(s) 302, 1542
TauI GCSGC 6 cut(s) 143, 146, 155, 158, 188, 834
Tru1I TTAA 4 cut(s) 1158, 1251, 1619, 1641
Tru9I TTAA 4 cut(s) 1158, 1251, 1619, 1641
TscAI CASTG 5 cut(s) 216, 222, 1353, 1407, 1530
TseFI GTSAC 1 cut(s) 207
TseI GCWGC 4 cut(s) 816, 819, 822, 834
Tsp45I GTSAC 1 cut(s) 207
TspDTI ATGAA 3 cut(s) 335, 351, 1529
TspGWI ACGGA 5 cut(s) 297, 552, 568, 1088, 1191
TspRI CASTG 5 cut(s) 216, 222, 1353, 1407, 1530
Vha464I CTTAAG 1 cut(s) 1618
VpaK11BI GGWCC 2 cut(s) 499, 1313
XagI CCTNNNNNAGG 1 cut(s) 662
XapI RAATTY 4 cut(s) 98, 263, 518, 1438
XceI RCATGY 1 cut(s) 1492
XmiI GTMKAC 1 cut(s) 1542
XmnI GAANNNNTTC 1 cut(s) 342
XspI CTAG 2 cut(s) 90, 114
ZraI GACGTC 1 cut(s) 300
Zsp2I ATGCAT 1 cut(s) 1237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.