Prupe.5G158300_v2.0.a1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000602
Physical Location & Seq
Reverse (-)
14040124 .. 14043842
3719 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G158300.1

Sequence Viewer

Length: 1686 bp
ATGTTGCCAGCTGCAGCTGTAGCTGCACGTCTCCTACTACCAGTGTCAGTGTCAGTGGTTTACGTAATTTATAAGTATTGGAGATCTGGACGGCAAACAGAGAGCTGGGTTCCCCCAAATCGCGGTAACAACGACGATGTTACCCCAAACTCCGGTAACAACGGCGTCGTTCCCCCAAATTCCGTCGTTCGCCCGAAGTCCTGTAAGAACGACGTCGTTCCCTCTGATGGCGATCTTGCCGTCGTTGAAGAGATTCTGAAAAATGACCCTGTCTTCTTTGATAAGATTCGGACACTCGACCCCGCCGTCCTTGATGAGCTTCTGAAAATCGACCCCGTCGCCCTTGATGAGCTTCTGAGAATCGACCCCGCCGTCCTCCGCGACTCTGCTGAATTGGATCCTGCCATCATCGATGCGATTTCTGAACTGTCTGAGAAAGAGGAAGGTGACGAGGAGGCCGACTGGAGTTGTAGTCGGCCAGTAACTGAGAGCTCTCTAGTCATCGGGGTTCCCACAAATTCCGGTAACAACGACGTCGTTCCCTCAAATTCCGGTAACAACGACGTCGTTCCCCCAAATTCCGGTAACAACGACGTCGTTCCCTGTCCTGAACTGTCTGATCGCGATCTTGCCATCCTTGAAGAGATTCTGAAAGATGACCCTGTCCTCCTTTATGAGATTCGGACACACGACCCCGCCGTTATTAATGAGCTTCGGAAATTCGATCCCGCCGTCCTCCGTGAGATGGTGTTGGACTCTGCTGAGGTGGATCCTACCATCATTGATGCGATTCGTAAATTGTGTTTGAAACGAAAGGAGGAAGATAAACAAGAGGCTAAGGGGAGTTGTAGTGGCCGAGAAACTGAAAGCGAAAACGAAAATGGAAACGAGACACAGAGCCAAGAGAGGGATGAGGAAATAAGCAGAAGCCGTCATTACCCATTGAGGCCTGAAGCTGCAGACTGTTCGTATTATCTAAAGACTGGGACTTGTAAGTTTAGGTCCAATTGCAAGTTTAATCACCCTCGCACAACAACGAAAAACAATCAGGATCACTTCTGGTCAGGAGGACGTAAAGACGGAAGAGATGGTAGTTTCAACCCCAGAAGTAGGGAACCTTTTGCAGCTCCATTTGTAGAAAACTTTATGGGCCTGCCAATTCGTCCGGGGGAGAGAGACTGTCCCTACTATATGCGAAATCTCTCCTGCGGGTATGGTTTAAGCTGTAGGTTTAATCACCCTGATCCTACACCTGCAGGAGAATCTGACCCCCCATCTGGATATGGTAATGGGGAACCTGCATCATTGCAAGGTGCATCGTCATCAACAGCAGCACGATGGTCTGCACCAAGATCATTGAACAATGCTCCACTTATAATTCCACCATCTCAAGGGATTCCTTCCAGAAATACAGAACACAATGGTTATCAGCAGCAGCAAGTTGAAGAGCTCCCACAACGACCTGGGCAACCTGTATGCATTTACTTCTCAACAACAGGGGATTGTAAGTTTAAATCTAATTGCAAATATCACCATCCCAAAAATCAGACTGCAGTGTCCCCCTCATGTGCACTGAATGACAAGGGCCTGCCTTTGAGACCAGGTCAGAACATCTGCACACAATACAGTAGCTATGGCATTTGCAATTCTGGGCCAGCTTGTAAATTTGACCATCCGTCATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

562

Amino Acids

61.76

Weight (kDa)

5.0

Isoelectric Point (pI)

56.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 72, 1376
AarI CACCTGC 1 cut(s) 1261
AasI GACNNNNNNGTC 3 cut(s) 305, 371, 1555
AatII GACGTC 4 cut(s) 216, 537, 567, 597
Acc36I ACCTGC 2 cut(s) 1261, 1306
AccII CGCG 3 cut(s) 123, 381, 624
AciI CCGC 7 cut(s) 123, 303, 369, 379, 696, 729, 1209
AclWI GGATC 7 cut(s) 392, 405, 719, 764, 777, 1059, 1238
AcoI YGGCCR 2 cut(s) 476, 853
AcsI RAATTY 6 cut(s) 178, 517, 547, 577, 719, 1664
AcuI CTGAAG 1 cut(s) 972
AcyI GRCGYC 5 cut(s) 165, 213, 534, 564, 594
AfiI CCNNNNNNNGG 9 cut(s) 122, 152, 227, 581, 745, 907, 1110, 1277, 1391
AgsI TTSAA 6 cut(s) 248, 641, 808, 1099, 1360, 1445
AhdI GACNNNNNGTC 1 cut(s) 1675
AjiI CACGTC 1 cut(s) 29
AjnI CCWGG 2 cut(s) 1462, 1600
Alw21I GWGCWC 3 cut(s) 494, 1452, 1573
Alw26I GTCTC 4 cut(s) 35, 884, 1170, 1591
Alw44I GTGCAC 1 cut(s) 1569
AlwI GGATC 7 cut(s) 392, 405, 719, 764, 777, 1059, 1238
AlwNI CAGNNNCTG 1 cut(s) 485
AoxI GGCC 7 cut(s) 456, 476, 853, 947, 1150, 1585, 1652
ApaLI GTGCAC 1 cut(s) 1569
ApeKI GCWGC 8 cut(s) 11, 14, 23, 956, 1124, 1331, 1432, 1435
ApoI RAATTY 6 cut(s) 178, 517, 547, 577, 719, 1664
AseI ATTAAT 1 cut(s) 705
Asp700I GAANNNNTTC 2 cut(s) 252, 645
AspS9I GGNCC 4 cut(s) 1002, 1150, 1585, 1652
AsuC2I CCSGG 1 cut(s) 1167
AsuHPI GGTGA 4 cut(s) 458, 1013, 1229, 1523
AvaII GGWCC 1 cut(s) 1002
BaeGI GKGCMC 1 cut(s) 1573
BamHI GGATCC 2 cut(s) 397, 769
BanII GRGCYC 2 cut(s) 494, 1452
BbsI GAAGAC 1 cut(s) 265
Bbv12I GWGCWC 3 cut(s) 494, 1452, 1573
BbvCI CCTCAGC 1 cut(s) 762
BbvI GCAGC 7 cut(s) 10, 26, 943, 1136, 1343, 1444, 1447
BceAI ACGGC 8 cut(s) 107, 178, 224, 290, 356, 683, 716, 915
BcgI CGANNNNNNTGC 2 cut(s) 948, 982
BciT130I CCWGG 2 cut(s) 1464, 1602
BcnI CCSGG 1 cut(s) 1167
BcoDI GTCTC 4 cut(s) 35, 884, 1170, 1591
BfaI CTAG 1 cut(s) 497
BfmI CTRYAG 6 cut(s) 12, 18, 957, 1225, 1254, 1551
BfuAI ACCTGC 2 cut(s) 1261, 1306
BglII AGATCT 1 cut(s) 83
BisI GCNGC 8 cut(s) 12, 15, 24, 957, 1125, 1332, 1433, 1436
BlsI GCNGC 8 cut(s) 13, 16, 25, 958, 1126, 1333, 1434, 1437
Bme1390I CCNGG 3 cut(s) 1167, 1464, 1602
Bme18I GGWCC 1 cut(s) 1002
BmeRI GACNNNNNGTC 1 cut(s) 1675
BmgBI CACGTC 1 cut(s) 29
BmgT120I GGNCC 4 cut(s) 1002, 1150, 1585, 1652
BmiI GGNNCC 6 cut(s) 111, 399, 510, 771, 1116, 1296
BmrFI CCNGG 3 cut(s) 1167, 1464, 1602
BmrI ACTGGG 1 cut(s) 993
BmsI GCATC 4 cut(s) 403, 775, 1310, 1325
BmuI ACTGGG 1 cut(s) 993
BpiI GAAGAC 1 cut(s) 265
BpmI CTGGAG 1 cut(s) 484
Bpu10I CCTNAGC 2 cut(s) 762, 837
BpuEI CTTGAG 1 cut(s) 1374
BpuMI CCSGG 1 cut(s) 1167
Bsa29I ATCGAT 1 cut(s) 411
BsaAI YACGTR 1 cut(s) 64
BsaBI GATNNNNATC 2 cut(s) 231, 624
BsaHI GRCGYC 5 cut(s) 165, 213, 534, 564, 594
BsaI GGTCTC 1 cut(s) 1591
BsaJI CCNNGG 2 cut(s) 1166, 1463
BsaWI WCCGGW 4 cut(s) 152, 521, 551, 581
BsaXI ACNNNNNCTCC 4 cut(s) 457, 487, 835, 865
Bsc4I CCNNNNNNNGG 9 cut(s) 122, 152, 227, 581, 745, 907, 1110, 1277, 1391
Bse1I ACTGG 4 cut(s) 41, 467, 479, 988
Bse3DI GCAATG 1 cut(s) 1304
Bse8I GATNNNNATC 2 cut(s) 231, 624
BseBI CCWGG 2 cut(s) 1464, 1602
BseCI ATCGAT 1 cut(s) 411
BseDI CCNNGG 2 cut(s) 1166, 1463
BseGI GGATG 4 cut(s) 633, 916, 1534, 1672
BseJI GATNNNNATC 2 cut(s) 231, 624
BseLI CCNNNNNNNGG 9 cut(s) 122, 152, 227, 581, 745, 907, 1110, 1277, 1391
BseMI GCAATG 1 cut(s) 1304
BseMII CTCAG 4 cut(s) 347, 423, 477, 753
BseNI ACTGG 4 cut(s) 41, 467, 479, 988
BseRI GAGGAG 1 cut(s) 467
BseSI GKGCMC 1 cut(s) 1573
BseXI GCAGC 7 cut(s) 10, 26, 943, 1136, 1343, 1444, 1447
BseYI CCCAGC 1 cut(s) 105
BsgI GTGCAG 3 cut(s) 9, 1329, 1600
Bsh1236I CGCG 3 cut(s) 123, 381, 624
BshFI GGCC 7 cut(s) 458, 478, 855, 949, 1152, 1587, 1654
BshVI ATCGAT 1 cut(s) 411
BsiHKAI GWGCWC 3 cut(s) 494, 1452, 1573
BsiSI CCGG 5 cut(s) 153, 522, 552, 582, 1166
BslFI GGGAC 3 cut(s) 1000, 1167, 1543
BslI CCNNNNNNNGG 9 cut(s) 122, 152, 227, 581, 745, 907, 1110, 1277, 1391
BsmAI GTCTC 4 cut(s) 35, 884, 1170, 1591
BsmBI CGTCTC 1 cut(s) 35
BsmFI GGGAC 3 cut(s) 1000, 1167, 1543
BsnI GGCC 7 cut(s) 458, 478, 855, 949, 1152, 1587, 1654
Bso31I GGTCTC 1 cut(s) 1591
Bsp1286I GDGCHC 3 cut(s) 494, 1452, 1573
Bsp68I TCGCGA 1 cut(s) 624
BspACI CCGC 7 cut(s) 123, 303, 369, 379, 696, 729, 1209
BspANI GGCC 7 cut(s) 458, 478, 855, 949, 1152, 1587, 1654
BspCNI CTCAG 4 cut(s) 348, 424, 478, 754
BspDI ATCGAT 1 cut(s) 411
BspFNI CGCG 3 cut(s) 123, 381, 624
BspLI GGNNCC 6 cut(s) 111, 399, 510, 771, 1116, 1296
BspMAI CTGCAG 4 cut(s) 16, 961, 1258, 1555
BspMI ACCTGC 2 cut(s) 1261, 1306
BspPI GGATC 7 cut(s) 392, 405, 719, 764, 777, 1059, 1238
BspQI GCTCTTC 1 cut(s) 1440
BspTNI GGTCTC 1 cut(s) 1591
BsrDI GCAATG 1 cut(s) 1304
BsrI ACTGG 4 cut(s) 41, 467, 479, 988
BssECI CCNNGG 2 cut(s) 1166, 1463
BssNI GRCGYC 5 cut(s) 165, 213, 534, 564, 594
Bst2UI CCWGG 2 cut(s) 1464, 1602
Bst4CI ACNGT 5 cut(s) 429, 615, 965, 1181, 1628
Bst6I CTCTTC 4 cut(s) 243, 636, 1078, 1440
BstACI GRCGYC 5 cut(s) 165, 213, 534, 564, 594
BstBAI YACGTR 1 cut(s) 64
BstC8I GCNNGC 4 cut(s) 9, 1154, 1589, 1656
BstDEI CTNAG 5 cut(s) 356, 432, 486, 762, 837
BstF5I GGATG 4 cut(s) 633, 916, 1534, 1672
BstFNI CGCG 3 cut(s) 123, 381, 624
BstMAI GTCTC 4 cut(s) 35, 884, 1170, 1591
BstMWI GCNNNNNNNGC 2 cut(s) 20, 23
BstNI CCWGG 2 cut(s) 1464, 1602
BstSCI CCNGG 3 cut(s) 1165, 1462, 1600
BstSFI CTRYAG 6 cut(s) 12, 18, 957, 1225, 1254, 1551
BstSLI GKGCMC 1 cut(s) 1573
BstSNI TACGTA 1 cut(s) 64
BstUI CGCG 3 cut(s) 123, 381, 624
BstV1I GCAGC 7 cut(s) 10, 26, 943, 1136, 1343, 1444, 1447
BstV2I GAAGAC 1 cut(s) 265
BstX2I RGATCY 3 cut(s) 83, 397, 769
BstYI RGATCY 3 cut(s) 83, 397, 769
Bsu15I ATCGAT 1 cut(s) 411
BsuRI GGCC 7 cut(s) 458, 478, 855, 949, 1152, 1587, 1654
BsuTUI ATCGAT 1 cut(s) 411
BtrI CACGTC 1 cut(s) 29
BtsCI GGATG 4 cut(s) 633, 916, 1534, 1672
BtsI GCAGTG 1 cut(s) 1560
BtsIMutI CAGTG 5 cut(s) 48, 54, 60, 1560, 1571
BtuMI TCGCGA 1 cut(s) 624
BveI ACCTGC 2 cut(s) 1261, 1306
Cac8I GCNNGC 4 cut(s) 9, 1154, 1589, 1656
CaiI CAGNNNCTG 1 cut(s) 485
Cfr13I GGNCC 4 cut(s) 1002, 1150, 1585, 1652
ClaI ATCGAT 1 cut(s) 411
CseI GACGC 1 cut(s) 154
CsiI ACCWGGT 1 cut(s) 1600
CviAII CATG 1 cut(s) 1566
DdeI CTNAG 5 cut(s) 356, 432, 486, 762, 837
DraI TTTAAA 1 cut(s) 1513
DrdI GACNNNNNNGTC 3 cut(s) 305, 371, 1555
DriI GACNNNNNGTC 1 cut(s) 1675
DseDI GACNNNNNNGTC 3 cut(s) 305, 371, 1555
EaeI YGGCCR 2 cut(s) 476, 853
Eam1104I CTCTTC 4 cut(s) 243, 636, 1078, 1440
Eam1105I GACNNNNNGTC 1 cut(s) 1675
EarI CTCTTC 4 cut(s) 243, 636, 1078, 1440
Ecl136II GAGCTC 2 cut(s) 492, 1450
Eco105I TACGTA 1 cut(s) 64
Eco147I AGGCCT 1 cut(s) 949
Eco24I GRGCYC 2 cut(s) 494, 1452
Eco31I GGTCTC 1 cut(s) 1591
Eco47I GGWCC 1 cut(s) 1002
Eco53kI GAGCTC 2 cut(s) 492, 1450
Eco57I CTGAAG 1 cut(s) 972
EcoICRI GAGCTC 2 cut(s) 492, 1450
EcoO109I RGGNCCY 1 cut(s) 1585
EcoRII CCWGG 2 cut(s) 1462, 1600
EcoT22I ATGCAT 1 cut(s) 1481
EcoT38I GRGCYC 2 cut(s) 494, 1452
Esp3I CGTCTC 1 cut(s) 35
FaeI CATG 1 cut(s) 1569
FaqI GGGAC 3 cut(s) 1000, 1167, 1543
FatI CATG 1 cut(s) 1565
FauI CCCGC 5 cut(s) 310, 376, 703, 736, 1202
Fnu4HI GCNGC 8 cut(s) 12, 15, 24, 957, 1125, 1332, 1433, 1436
FokI GGATG 4 cut(s) 620, 923, 1521, 1659
FriOI GRGCYC 2 cut(s) 494, 1452
Fsp4HI GCNGC 8 cut(s) 12, 15, 24, 957, 1125, 1332, 1433, 1436
FspBI CTAG 1 cut(s) 497
GluI GCNGC 8 cut(s) 12, 15, 24, 957, 1125, 1332, 1433, 1436
GsaI CCCAGC 1 cut(s) 109
GsuI CTGGAG 1 cut(s) 484
HaeIII GGCC 7 cut(s) 458, 478, 855, 949, 1152, 1587, 1654
HapII CCGG 5 cut(s) 153, 522, 552, 582, 1166
HgaI GACGC 1 cut(s) 154
Hin1I GRCGYC 5 cut(s) 165, 213, 534, 564, 594
Hin1II CATG 1 cut(s) 1569
HpaII CCGG 5 cut(s) 153, 522, 552, 582, 1166
HphI GGTGA 4 cut(s) 458, 1013, 1229, 1523
Hpy166II GTNNAC 2 cut(s) 61, 1571
Hpy188III TCNNGA 7 cut(s) 87, 608, 623, 1049, 1065, 1278, 1404
Hpy8I GTNNAC 2 cut(s) 61, 1571
HpyAV CCTTC 2 cut(s) 437, 1410
HpyCH4III ACNGT 5 cut(s) 429, 615, 965, 1181, 1628
HpyCH4IV ACGT 7 cut(s) 28, 63, 213, 534, 564, 594, 1072
HpyF10VI GCNNNNNNNGC 2 cut(s) 20, 23
HpyF3I CTNAG 5 cut(s) 356, 432, 486, 762, 837
HpySE526I ACGT 7 cut(s) 28, 63, 213, 534, 564, 594, 1072
Hsp92I GRCGYC 5 cut(s) 165, 213, 534, 564, 594
Hsp92II CATG 1 cut(s) 1569
LguI GCTCTTC 1 cut(s) 1440
LmnI GCTCC 3 cut(s) 1132, 1372, 1455
Lsp1109I GCAGC 7 cut(s) 10, 26, 943, 1136, 1343, 1444, 1447
LweI GCATC 4 cut(s) 403, 775, 1310, 1325
MabI ACCWGGT 1 cut(s) 1600
MaeI CTAG 1 cut(s) 497
MaeII ACGT 7 cut(s) 28, 63, 213, 534, 564, 594, 1072
MaeIII GTNAC 8 cut(s) 125, 139, 155, 446, 481, 524, 554, 584
MboII GAAGA 6 cut(s) 260, 265, 653, 833, 1095, 1457
MfeI CAATTG 1 cut(s) 1006
MflI RGATCY 3 cut(s) 83, 397, 769
MhlI GDGCHC 3 cut(s) 494, 1452, 1573
MlyI GAGTC 2 cut(s) 377, 749
MmeI TCCRAC 1 cut(s) 732
Mph1103I ATGCAT 1 cut(s) 1481
MroXI GAANNNNTTC 2 cut(s) 252, 645
MseI TTAA 5 cut(s) 705, 1017, 1220, 1233, 1512
MspA1I CMGCKG 2 cut(s) 11, 17
MspI CCGG 5 cut(s) 153, 522, 552, 582, 1166
MspR9I CCNGG 3 cut(s) 1167, 1464, 1602
MunI CAATTG 1 cut(s) 1006
MvaI CCWGG 2 cut(s) 1464, 1602
MvnI CGCG 3 cut(s) 123, 381, 624
MwoI GCNNNNNNNGC 2 cut(s) 20, 23
NciI CCSGG 1 cut(s) 1167
NlaIII CATG 1 cut(s) 1569
NlaIV GGNNCC 6 cut(s) 111, 399, 510, 771, 1116, 1296
NmeAIII GCCGAG 1 cut(s) 881
NmuCI GTSAC 1 cut(s) 446
NruI TCGCGA 1 cut(s) 624
NsiI ATGCAT 1 cut(s) 1481
PaqCI CACCTGC 1 cut(s) 1261
PceI AGGCCT 1 cut(s) 949
PciSI GCTCTTC 1 cut(s) 1440
PcsI WCGNNNNNNNCGW 5 cut(s) 303, 369, 456, 696, 729
PdmI GAANNNNTTC 2 cut(s) 252, 645
PfeI GAWTC 8 cut(s) 253, 286, 360, 646, 679, 790, 1262, 1396
PflFI GACNNNGTC 4 cut(s) 269, 335, 662, 1602
PkrI GCNGC 8 cut(s) 13, 16, 25, 958, 1126, 1333, 1434, 1437
PleI GAGTC 2 cut(s) 377, 749
PpsI GAGTC 2 cut(s) 377, 749
Ppu21I YACGTR 1 cut(s) 64
PshBI ATTAAT 1 cut(s) 705
PsiI TTATAA 2 cut(s) 72, 1376
Psp124BI GAGCTC 2 cut(s) 494, 1452
Psp6I CCWGG 2 cut(s) 1462, 1600
PspFI CCCAGC 1 cut(s) 105
PspGI CCWGG 2 cut(s) 1462, 1600
PspN4I GGNNCC 6 cut(s) 111, 399, 510, 771, 1116, 1296
PspPI GGNCC 4 cut(s) 1002, 1150, 1585, 1652
PstI CTGCAG 4 cut(s) 16, 961, 1258, 1555
PstNI CAGNNNCTG 1 cut(s) 485
PsuI RGATCY 3 cut(s) 83, 397, 769
PsyI GACNNNGTC 4 cut(s) 269, 335, 662, 1602
PvuII CAGCTG 2 cut(s) 11, 17
RruI TCGCGA 1 cut(s) 624
SacI GAGCTC 2 cut(s) 494, 1452
SapI GCTCTTC 1 cut(s) 1440
SaqAI TTAA 5 cut(s) 705, 1017, 1220, 1233, 1512
SatI GCNGC 8 cut(s) 12, 15, 24, 957, 1125, 1332, 1433, 1436
Sau96I GGNCC 4 cut(s) 1002, 1150, 1585, 1652
SbfI CCTGCAGG 1 cut(s) 1258
SchI GAGTC 2 cut(s) 377, 749
ScrFI CCNGG 3 cut(s) 1167, 1464, 1602
SdaI CCTGCAGG 1 cut(s) 1258
SduI GDGCHC 3 cut(s) 494, 1452, 1573
SexAI ACCWGGT 1 cut(s) 1600
SfaNI GCATC 4 cut(s) 403, 775, 1310, 1325
SfcI CTRYAG 6 cut(s) 12, 18, 957, 1225, 1254, 1551
SinI GGWCC 1 cut(s) 1002
SmlI CTYRAG 1 cut(s) 1389
SmoI CTYRAG 1 cut(s) 1389
SnaBI TACGTA 1 cut(s) 64
Sse8387I CCTGCAGG 1 cut(s) 1258
SseBI AGGCCT 1 cut(s) 949
SsiI CCGC 7 cut(s) 123, 303, 369, 379, 696, 729, 1209
SspMI CTAG 1 cut(s) 497
SstI GAGCTC 2 cut(s) 494, 1452
StuI AGGCCT 1 cut(s) 949
StyD4I CCNGG 3 cut(s) 1165, 1462, 1600
TaaI ACNGT 5 cut(s) 429, 615, 965, 1181, 1628
TaiI ACGT 7 cut(s) 31, 66, 216, 537, 567, 597, 1075
TaqI TCGA 5 cut(s) 297, 330, 363, 411, 723
TfiI GAWTC 8 cut(s) 253, 286, 360, 646, 679, 790, 1262, 1396
Tru1I TTAA 5 cut(s) 705, 1017, 1220, 1233, 1512
Tru9I TTAA 5 cut(s) 705, 1017, 1220, 1233, 1512
TscAI CASTG 5 cut(s) 48, 54, 60, 1560, 1578
TseFI GTSAC 1 cut(s) 446
TseI GCWGC 8 cut(s) 11, 14, 23, 956, 1124, 1331, 1432, 1435
Tsp45I GTSAC 1 cut(s) 446
TspGWI ACGGA 4 cut(s) 172, 728, 1095, 1665
TspRI CASTG 5 cut(s) 48, 54, 60, 1560, 1578
Tth111I GACNNNGTC 4 cut(s) 269, 335, 662, 1602
VneI GTGCAC 1 cut(s) 1569
VpaK11BI GGWCC 1 cut(s) 1002
VspI ATTAAT 1 cut(s) 705
XapI RAATTY 6 cut(s) 178, 517, 547, 577, 719, 1664
XmnI GAANNNNTTC 2 cut(s) 252, 645
XspI CTAG 1 cut(s) 497
ZraI GACGTC 4 cut(s) 214, 535, 565, 595
Zsp2I ATGCAT 1 cut(s) 1481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.