Rh7CG123200

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000602
Physical Location & Seq
Reverse (-)
9561551 .. 9565469
3919 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG123200.1

Sequence Viewer

Length: 1527 bp
ATGGAGCTCTCTGAATCGTCCTCCTCCTCCTCTGTTTCCCCAAATCTGGATTTGCATATCGGCAACAGCAACGAAATCGATCAGGTTCAGCTCAACCATTCCGACATAGGGTCTCAACAGTCCACCACCACCGCCGCCTACCAGCAGCTGGACAATCCCTCCGACTCCGGTGGTGACGCGGCGGTCAGTCATTCCAGTCCTGATCCCGAGGTCGTGGATCACGCTGTCGTTGTTGATGAGATTGAGAGATTGGATTTGAGAGGAGACGATGCTGATGATGTAGCGGTGGAGGCAGCAGCCGAGGTAGAGGAAGGAGGAGAGGTTGAGGCGGAGGAGAAGAGTTCTAATGGTGGTGGTGGTGGAGAAATCGAAAACGGAAATGAAAGTGAGAGACAGAGCGAGGAAGAAGAGAGCAATGAAGGAGAAAACAGGAGTGAGAATGGAGAGAAGAAGGGGGGAGAATATAACAGAAGGTATCAGTATCCAGTGAGGCCTGAAGCTGAAGACTGCTCCTTTTACCTCAAGACGGGGAATTGCAAGTTTGGATCCAACTGCAAGTTTAATCACCCTGTTAGAAGGAAAAACAACCAGGTTTTTAAAGACAAGGTGAAGGAAAAGGACGAGTTTTCAGAGAAGCCAAGCCAGACAGAATGCAAGTATTACTTAAGGCCAGGGGGATGTAAGTATGGGAAAGCTTGCAGATACAACCATGGAAAAGGGAAACCTTCGGTTGCTCCAGTTGTGGAACTTAACTTTCTGGGACTGCCAATTCGACAGGGGGAGAGAGAGTGTCCCTACTATATGCGAAATGGCTCCTGCAAGTATGGATCAAACTGCAGGTTTAATCACCCTGATCCTACTGCTGCAGGAGGATCTGACCCTCCGTCTGGATTTGATAATGGTGGACCTGCATCATTACAAGGTGGATTGCAATCATCATCTTGGTCTGCACCAAGATCATTGAATGAGACTCCGCTTTATATGCCAATGATGATGCCACCATCTCAAGGGGTTCCTTCCCAAAATACAGAATGGAATGGCTATCAGGCACCAGTTTATCTAGAAAGAAGCATGGCTGCACCTCCACCATATGTTATCAACAACTCAGGGACCGAAACCAATGTTTATAAACAATATCCACTGTCAAATCAAGTTGATGAATTCCCAGAACGACCTGGACAACCTTTGTGCAGTTTCTTTTTAAGAACAGGGGACTGTAAGTTTAAATCTAACTGCAAATATCATCATCCAAAAAGTCAGATTGCAGTATCCCCCTCATTTGCACTGAGTGACAAGGGCCTGCCTTTGAGACCAGATCAGAATATTTGCACCCATTACAGTCGCTATGGCATTTGCAAATTTGGGCCAGCTTGTAAATTTGATCATCCGTTACATTTAACCTCTTCAACTACATCTGGTCTTGATCATCAACTTCCTTTCAGTGACTTGGCAAATACAAAAGAGGCGGGAATAGCTAGGAGCAGAAGTGGAACTGATGATACAATTCAGCTGCAACAAGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

508

Amino Acids

55.65

Weight (kDa)

5.09

Isoelectric Point (pI)

61.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 168 - 190 3.2e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 215 - 239 7.5e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 260 - 284 2.4e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4 PF18345 264 - 283 8.3e-06 Zinc finger domain
zf-CCCH_4 PF18044 264 - 284 3.3e-07 CCCH-type zinc finger
zf-CCCH PF00642 392 - 418 4.1e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 439 - 463 1.2e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1128
AasI GACNNNNNNGTC 1 cut(s) 182
Acc36I ACCTGC 2 cut(s) 828, 916
AccB1I GGYRCC 1 cut(s) 1048
AccB7I CCANNNNNTGG 1 cut(s) 148
AccII CGCG 1 cut(s) 179
AciI CCGC 8 cut(s) 132, 135, 179, 182, 284, 329, 974, 1466
AclWI GGATC 7 cut(s) 197, 225, 540, 553, 835, 848, 880
AcsI RAATTY 3 cut(s) 1160, 1358, 1376
AcuI CTGAAG 2 cut(s) 516, 522
AdeI CACNNNGTG 1 cut(s) 1289
AfiI CCNNNNNNNGG 6 cut(s) 46, 108, 148, 526, 887, 1007
AflII CTTAAG 1 cut(s) 664
AgsI TTSAA 2 cut(s) 964, 1407
AhdI GACNNNNNGTC 2 cut(s) 109, 883
AjnI CCWGG 3 cut(s) 588, 670, 1174
AluBI AGCT 9 cut(s) 7, 91, 148, 500, 695, 1370, 1475, 1510, 1520
AluI AGCT 9 cut(s) 7, 91, 148, 500, 695, 1370, 1475, 1510, 1520
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 5 cut(s) 117, 258, 385, 962, 1303
AlwI GGATC 7 cut(s) 197, 225, 540, 553, 835, 848, 880
AlwNI CAGNNNCTG 1 cut(s) 148
Ama87I CYCGRG 1 cut(s) 206
AoxI GGCC 4 cut(s) 491, 668, 1297, 1364
ApeKI GCWGC 6 cut(s) 145, 293, 296, 863, 1076, 1510
ApoI RAATTY 3 cut(s) 1160, 1358, 1376
ArsI GACNNNNNNTTYG 2 cut(s) 753, 785
AspS9I GGNCC 4 cut(s) 905, 1110, 1297, 1364
AsuHPI GGTGA 4 cut(s) 185, 557, 619, 839
AvaI CYCGRG 1 cut(s) 206
AvaII GGWCC 2 cut(s) 905, 1110
BamHI GGATCC 1 cut(s) 545
BanI GGYRCC 1 cut(s) 1048
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 510
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 6 cut(s) 157, 305, 308, 850, 1063, 1497
BccI CCATC 1 cut(s) 1009
BcgI CGANNNNNNTGC 2 cut(s) 58, 92
BciT130I CCWGG 3 cut(s) 590, 672, 1176
BciVI GTATCC 2 cut(s) 492, 1279
BclI TGATCA 2 cut(s) 1381, 1423
BcoDI GTCTC 5 cut(s) 117, 258, 385, 962, 1303
BfaI CTAG 2 cut(s) 1061, 1476
BfmI CTRYAG 2 cut(s) 835, 864
BfrI CTTAAG 1 cut(s) 664
BfuAI ACCTGC 2 cut(s) 828, 916
BfuI GTATCC 2 cut(s) 492, 1279
BisI GCNGC 8 cut(s) 135, 146, 180, 294, 297, 864, 1077, 1511
BlsI GCNGC 8 cut(s) 136, 147, 181, 295, 298, 865, 1078, 1512
Bme1390I CCNGG 3 cut(s) 590, 672, 1176
Bme18I GGWCC 2 cut(s) 905, 1110
BmeRI GACNNNNNGTC 2 cut(s) 109, 883
BmeT110I CYCGRG 1 cut(s) 206
BmgT120I GGNCC 4 cut(s) 905, 1110, 1297, 1364
BmiI GGNNCC 5 cut(s) 547, 814, 1014, 1050, 1111
BmrFI CCNGG 3 cut(s) 590, 672, 1176
BmsI GCATC 3 cut(s) 259, 920, 984
BpiI GAAGAC 1 cut(s) 510
BpmI CTGGAG 1 cut(s) 720
BpuEI CTTGAG 2 cut(s) 506, 990
Bsa29I ATCGAT 1 cut(s) 78
BsaBI GATNNNNATC 1 cut(s) 931
BsaI GGTCTC 2 cut(s) 117, 1303
BsaJI CCNNGG 4 cut(s) 207, 300, 671, 709
BsaWI WCCGGW 1 cut(s) 167
BsaXI ACNNNNNCTCC 8 cut(s) 143, 173, 306, 336, 773, 803, 1471, 1501
Bsc4I CCNNNNNNNGG 6 cut(s) 46, 108, 148, 526, 887, 1007
Bse1I ACTGG 4 cut(s) 195, 485, 737, 1052
Bse3DI GCAATG 1 cut(s) 421
Bse8I GATNNNNATC 1 cut(s) 931
BseBI CCWGG 3 cut(s) 590, 672, 1176
BseCI ATCGAT 1 cut(s) 78
BseDI CCNNGG 4 cut(s) 207, 300, 671, 709
BseGI GGATG 3 cut(s) 683, 1246, 1384
BseJI GATNNNNATC 1 cut(s) 931
BseLI CCNNNNNNNGG 6 cut(s) 46, 108, 148, 526, 887, 1007
BseMI GCAATG 1 cut(s) 421
BseMII CTCAG 2 cut(s) 1119, 1277
BseNI ACTGG 4 cut(s) 195, 485, 737, 1052
BseRI GAGGAG 6 cut(s) 13, 16, 19, 276, 330, 347
BseXI GCAGC 6 cut(s) 157, 305, 308, 850, 1063, 1497
BsgI GTGCAG 3 cut(s) 933, 1062, 1210
Bsh1236I CGCG 1 cut(s) 179
BshFI GGCC 4 cut(s) 493, 670, 1299, 1366
BshNI GGYRCC 1 cut(s) 1048
BshVI ATCGAT 1 cut(s) 78
BsiHKAI GWGCWC 1 cut(s) 9
BsiHKCI CYCGRG 1 cut(s) 206
BsiSI CCGG 1 cut(s) 168
BslFI GGGAC 4 cut(s) 774, 777, 1123, 1226
BslI CCNNNNNNNGG 6 cut(s) 46, 108, 148, 526, 887, 1007
BsmAI GTCTC 5 cut(s) 117, 258, 385, 962, 1303
BsmBI CGTCTC 1 cut(s) 258
BsmFI GGGAC 4 cut(s) 774, 777, 1123, 1226
BsmI GAATGC 1 cut(s) 656
BsnI GGCC 4 cut(s) 493, 670, 1299, 1366
Bso31I GGTCTC 2 cut(s) 117, 1303
BsoBI CYCGRG 1 cut(s) 206
Bsp1286I GDGCHC 1 cut(s) 9
Bsp19I CCATGG 1 cut(s) 709
BspACI CCGC 8 cut(s) 132, 135, 179, 182, 284, 329, 974, 1466
BspANI GGCC 4 cut(s) 493, 670, 1299, 1366
BspCNI CTCAG 2 cut(s) 1118, 1278
BspDI ATCGAT 1 cut(s) 78
BspFNI CGCG 1 cut(s) 179
BspLI GGNNCC 5 cut(s) 547, 814, 1014, 1050, 1111
BspMAI CTGCAG 2 cut(s) 839, 868
BspMI ACCTGC 2 cut(s) 828, 916
BspPI GGATC 7 cut(s) 197, 225, 540, 553, 835, 848, 880
BspT107I GGYRCC 1 cut(s) 1048
BspTI CTTAAG 1 cut(s) 664
BspTNI GGTCTC 2 cut(s) 117, 1303
BsrDI GCAATG 1 cut(s) 421
BsrI ACTGG 4 cut(s) 195, 485, 737, 1052
BssECI CCNNGG 4 cut(s) 207, 300, 671, 709
BssT1I CCWWGG 1 cut(s) 709
Bst2UI CCWGG 3 cut(s) 590, 672, 1176
Bst4CI ACNGT 4 cut(s) 120, 1143, 1217, 1340
Bst6I CTCTTC 3 cut(s) 332, 402, 1408
BstAFI CTTAAG 1 cut(s) 664
BstC8I GCNNGC 3 cut(s) 697, 1301, 1368
BstDEI CTNAG 2 cut(s) 1105, 1286
BstDSI CCRYGG 1 cut(s) 709
BstF5I GGATG 3 cut(s) 683, 1246, 1384
BstFNI CGCG 1 cut(s) 179
BstMAI GTCTC 5 cut(s) 117, 258, 385, 962, 1303
BstMWI GCNNNNNNNGC 3 cut(s) 290, 982, 1472
BstNI CCWGG 3 cut(s) 590, 672, 1176
BstSCI CCNGG 3 cut(s) 588, 670, 1174
BstSFI CTRYAG 2 cut(s) 835, 864
BstUI CGCG 1 cut(s) 179
BstV1I GCAGC 6 cut(s) 157, 305, 308, 850, 1063, 1497
BstV2I GAAGAC 1 cut(s) 510
BstX2I RGATCY 2 cut(s) 545, 872
BstYI RGATCY 2 cut(s) 545, 872
Bsu15I ATCGAT 1 cut(s) 78
BsuI GTATCC 2 cut(s) 492, 1279
BsuRI GGCC 4 cut(s) 493, 670, 1299, 1366
BsuTUI ATCGAT 1 cut(s) 78
BtgI CCRYGG 1 cut(s) 709
BtsCI GGATG 3 cut(s) 683, 1246, 1384
BtsIMutI CAGTG 4 cut(s) 492, 1139, 1283, 1447
BveI ACCTGC 2 cut(s) 828, 916
Cac8I GCNNGC 3 cut(s) 697, 1301, 1368
CaiI CAGNNNCTG 1 cut(s) 148
Cfr13I GGNCC 4 cut(s) 905, 1110, 1297, 1364
ClaI ATCGAT 1 cut(s) 78
CseI GACGC 1 cut(s) 185
CsiI ACCWGGT 1 cut(s) 588
CviAII CATG 2 cut(s) 710, 1072
DdeI CTNAG 2 cut(s) 1105, 1286
DraI TTTAAA 2 cut(s) 598, 1225
DraIII CACNNNGTG 1 cut(s) 1289
DrdI GACNNNNNNGTC 1 cut(s) 182
DriI GACNNNNNGTC 2 cut(s) 109, 883
DseDI GACNNNNNNGTC 1 cut(s) 182
Eam1104I CTCTTC 3 cut(s) 332, 402, 1408
Eam1105I GACNNNNNGTC 2 cut(s) 109, 883
EarI CTCTTC 3 cut(s) 332, 402, 1408
EciI GGCGGA 1 cut(s) 344
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 709
Eco147I AGGCCT 1 cut(s) 493
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 2 cut(s) 117, 1303
Eco47I GGWCC 2 cut(s) 905, 1110
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 2 cut(s) 516, 522
Eco88I CYCGRG 1 cut(s) 206
EcoICRI GAGCTC 1 cut(s) 7
EcoO109I RGGNCCY 1 cut(s) 1297
EcoRI GAATTC 1 cut(s) 1160
EcoRII CCWGG 3 cut(s) 588, 670, 1174
EcoT14I CCWWGG 1 cut(s) 709
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 709
Esp3I CGTCTC 1 cut(s) 258
FaeI CATG 2 cut(s) 713, 1075
FalI AAGNNNNNCTT 2 cut(s) 647, 679
FaqI GGGAC 4 cut(s) 774, 777, 1123, 1226
FatI CATG 2 cut(s) 709, 1071
FauI CCCGC 1 cut(s) 1459
FauNDI CATATG 1 cut(s) 1090
FbaI TGATCA 2 cut(s) 1381, 1423
Fnu4HI GCNGC 8 cut(s) 135, 146, 180, 294, 297, 864, 1077, 1511
FokI GGATG 3 cut(s) 690, 1233, 1371
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 8 cut(s) 135, 146, 180, 294, 297, 864, 1077, 1511
FspBI CTAG 2 cut(s) 1061, 1476
GluI GCNGC 8 cut(s) 135, 146, 180, 294, 297, 864, 1077, 1511
GsuI CTGGAG 1 cut(s) 720
HaeIII GGCC 4 cut(s) 493, 670, 1299, 1366
HapII CCGG 1 cut(s) 168
HgaI GACGC 1 cut(s) 185
Hin1II CATG 2 cut(s) 713, 1075
HindIII AAGCTT 1 cut(s) 693
HinfI GANTC 3 cut(s) 14, 164, 970
HpaII CCGG 1 cut(s) 168
HphI GGTGA 4 cut(s) 185, 557, 619, 839
Hpy166II GTNNAC 2 cut(s) 123, 905
Hpy188I TCNGA 7 cut(s) 13, 103, 163, 631, 877, 1260, 1320
Hpy188III TCNNGA 7 cut(s) 47, 200, 206, 523, 888, 1061, 1421
Hpy8I GTNNAC 2 cut(s) 123, 905
HpyAV CCTTC 8 cut(s) 305, 413, 445, 465, 570, 604, 735, 1026
HpyCH4III ACNGT 4 cut(s) 120, 1143, 1217, 1340
HpyF10VI GCNNNNNNNGC 3 cut(s) 290, 982, 1472
HpyF3I CTNAG 2 cut(s) 1105, 1286
Hsp92II CATG 2 cut(s) 713, 1075
Ksp22I TGATCA 2 cut(s) 1381, 1423
LmnI GCTCC 5 cut(s) 4, 515, 739, 818, 1479
Lsp1109I GCAGC 6 cut(s) 157, 305, 308, 850, 1063, 1497
LweI GCATC 3 cut(s) 259, 920, 984
MabI ACCWGGT 1 cut(s) 588
MaeI CTAG 2 cut(s) 1061, 1476
MaeIII GTNAC 4 cut(s) 173, 1289, 1389, 1442
MboII GAAGA 6 cut(s) 349, 416, 419, 460, 515, 1395
MflI RGATCY 2 cut(s) 545, 872
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 6 cut(s) 532, 768, 1160, 1358, 1376, 1503
MlyI GAGTC 2 cut(s) 158, 964
MmeI TCCRAC 3 cut(s) 126, 186, 573
MseI TTAA 8 cut(s) 561, 597, 665, 750, 843, 1202, 1224, 1397
MspA1I CMGCKG 2 cut(s) 148, 1510
MspCI CTTAAG 1 cut(s) 664
MspI CCGG 1 cut(s) 168
MspR9I CCNGG 3 cut(s) 590, 672, 1176
Mva1269I GAATGC 1 cut(s) 656
MvaI CCWGG 3 cut(s) 590, 672, 1176
MvnI CGCG 1 cut(s) 179
MwoI GCNNNNNNNGC 3 cut(s) 290, 982, 1472
NcoI CCATGG 1 cut(s) 709
NdeI CATATG 1 cut(s) 1090
NlaIII CATG 2 cut(s) 713, 1075
NlaIV GGNNCC 5 cut(s) 547, 814, 1014, 1050, 1111
NmeAIII GCCGAG 1 cut(s) 325
NmuCI GTSAC 3 cut(s) 173, 1289, 1442
PceI AGGCCT 1 cut(s) 493
PctI GAATGC 1 cut(s) 656
PfeI GAWTC 1 cut(s) 14
PflMI CCANNNNNTGG 1 cut(s) 148
PkrI GCNGC 8 cut(s) 136, 147, 181, 295, 298, 865, 1078, 1512
PleI GAGTC 2 cut(s) 158, 964
PpsI GAGTC 2 cut(s) 158, 964
PsiI TTATAA 1 cut(s) 1128
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 3 cut(s) 588, 670, 1174
PspGI CCWGG 3 cut(s) 588, 670, 1174
PspN4I GGNNCC 5 cut(s) 547, 814, 1014, 1050, 1111
PspPI GGNCC 4 cut(s) 905, 1110, 1297, 1364
PsrI GAACNNNNNNTAC 2 cut(s) 1483, 1515
PstI CTGCAG 2 cut(s) 839, 868
PstNI CAGNNNCTG 1 cut(s) 148
PsuI RGATCY 2 cut(s) 545, 872
PvuII CAGCTG 2 cut(s) 148, 1510
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 8 cut(s) 561, 597, 665, 750, 843, 1202, 1224, 1397
SatI GCNGC 8 cut(s) 135, 146, 180, 294, 297, 864, 1077, 1511
Sau96I GGNCC 4 cut(s) 905, 1110, 1297, 1364
SchI GAGTC 2 cut(s) 158, 964
ScrFI CCNGG 3 cut(s) 590, 672, 1176
SduI GDGCHC 1 cut(s) 9
SexAI ACCWGGT 1 cut(s) 588
SfaNI GCATC 3 cut(s) 259, 920, 984
SfcI CTRYAG 2 cut(s) 835, 864
SinI GGWCC 2 cut(s) 905, 1110
SmlI CTYRAG 3 cut(s) 521, 664, 1005
SmoI CTYRAG 3 cut(s) 521, 664, 1005
Sse9I AATT 6 cut(s) 532, 768, 1160, 1358, 1376, 1503
SseBI AGGCCT 1 cut(s) 493
SsiI CCGC 8 cut(s) 132, 135, 179, 182, 284, 329, 974, 1466
SspI AATATT 1 cut(s) 1324
SspMI CTAG 2 cut(s) 1061, 1476
SstI GAGCTC 1 cut(s) 9
StuI AGGCCT 1 cut(s) 493
StyD4I CCNGG 3 cut(s) 588, 670, 1174
StyI CCWWGG 1 cut(s) 709
TaaI ACNGT 4 cut(s) 120, 1143, 1217, 1340
TaqI TCGA 3 cut(s) 78, 369, 772
TaqII GACCGA 1 cut(s) 1127
TasI AATT 6 cut(s) 532, 768, 1160, 1358, 1376, 1503
TauI GCSGC 2 cut(s) 137, 182
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 8 cut(s) 561, 597, 665, 750, 843, 1202, 1224, 1397
Tru9I TTAA 8 cut(s) 561, 597, 665, 750, 843, 1202, 1224, 1397
TscAI CASTG 4 cut(s) 492, 1146, 1290, 1447
TseFI GTSAC 3 cut(s) 173, 1289, 1442
TseI GCWGC 6 cut(s) 145, 293, 296, 863, 1076, 1510
Tsp45I GTSAC 3 cut(s) 173, 1289, 1442
TspDTI ATGAA 3 cut(s) 396, 432, 1173
TspGWI ACGGA 3 cut(s) 390, 873, 1377
TspRI CASTG 4 cut(s) 492, 1146, 1290, 1447
Van91I CCANNNNNTGG 1 cut(s) 148
Vha464I CTTAAG 1 cut(s) 664
VpaK11BI GGWCC 2 cut(s) 905, 1110
XapI RAATTY 3 cut(s) 1160, 1358, 1376
XbaI TCTAGA 1 cut(s) 1060
XspI CTAG 2 cut(s) 1061, 1476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.