RLG00000004449

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000602
Physical Location & Seq
Forward (+)
59442167 .. 59445839
3673 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000004449

Sequence Viewer

Length: 1473 bp
ATGGAGCTCTCTGAATCGTCCTCCTCTGTTTCCCCAAATCTGGATTTGCATATCGGCAACAGCGACGAAATCGATCAGGTTCAGCTCAGCCATTCCGACATAGGGTCTCAACAGTCCACCACCGCCGCCTACCAGCAGCTGGACAATCACTCCGACTCCGGTGGCGGCGGTGACGTGGCGGTTAGTCATTCCAGTCCCGATCCCGATGTTGCTGGTGATGTCGTGGATCACGCTGCTGTCGTTGATGAGATTGAGAGATTGGATTTGAGAGGAGACGATGCTGATGTAGTAGCGGTGGAGGCGGAGGTACAGCAAGAGAACAAAGAGGAAGGGGGAGAGGTTGAGGCAGAGGCAGAGGCGGAGGCGGAGAAGAGTTCTAATGGTGGTGGTGGAGAAATCGAAAACGGAAATGAAAGTGAGAGACAGAGCGAGGAAGAAGAGAGCAATGAAGAAGGAGAAAACAGGAGTGAGAATGGAGAGAAGAAGGGGGGAGAATATAACAGAAGGTATCAGTATCCAGTGAGGCCTGAAGCTGAAGACTGTTCCTTTTACCTCAAGACGGGGAATTGCAAGTTTGGATCCAATTGCAAGTTTAATCACCCGTATTACTCAAGGCCAGGGGGATGTAAGTATGGGAAAGCTTGCAGATACAACCATGGAAAAGGGAAACCTTCGGTTGCTTCAGTTGTGGAACTTAATTTTCTGGGACTGCCAATTCGACAGGGGGAGAGAGAGTGTCCCTACTATATGCGAAATGGCTCCTGCAAGTATGGGTCAAACTGCAGGTTTAATCACCCTGATCCTACTGCTGCAGGAGGATCTGACCCTCCGCCTGGATTTGATAATGGTGGACCTGCATCATTACAAGGTGGATTGCAATCATCATCTTGGTCTGCACCAAGATCATTGAATGAGACTCCGCTTTATATGCCAATGATGATGCCACCATCTCAAGGGGTTCCTTCCCAAAATACAGAATGGAATGGCTATCAGGCACCAGTTTATCTAGAAAGAAGCATGCCTGCACCTCCACCATATGTTATCAACAACTCAGGGACTGAAACCAATGTTTATAAACAATATCCACCGTCAAATCAAGTTGATGAATTCCCAGAACGACCTGGACAACCTTTGTGCAGTTTCTTTTTAAGAACAGGGGACTGTAAATTTAAATCTAACTGCAAATATCATCATCCAAAAAGTCAGACAGCAGTATCCCCCTCATTTGCACTGAGTGACAAGGGCCTGCCTTTGAGACCAGATCAGAATATTTGCACCCATTACAGTCGCTATGGCATTTGCAAATTTGGGCCAGCTTGTAAATTTGATCATCCGTTACATTTAACATCTTCAACTACATCTGGTCTTGATCATCAACTTCCTTTCAGTGACTTGGCAAATACAAAAGAGGCGGGAATAGCTAGGAGCAGAAGTGGAACTGATGATACAATTCAGCTGCAACAAGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

491

Amino Acids

53.3

Weight (kDa)

4.85

Isoelectric Point (pI)

61.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 179 - 201 3.2e-09 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 242 - 266 2.3e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4 PF18345 246 - 265 7.9e-06 Zinc finger domain
zf-CCCH_4 PF18044 246 - 266 3.2e-07 CCCH-type zinc finger
zf-CCCH PF00642 374 - 400 3.9e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 421 - 445 1.2e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1074
Acc36I ACCTGC 2 cut(s) 774, 862
AccB1I GGYRCC 1 cut(s) 994
AccB7I CCANNNNNTGG 1 cut(s) 139
AclWI GGATC 6 cut(s) 194, 234, 573, 586, 794, 826
AcsI RAATTY 4 cut(s) 1106, 1166, 1304, 1322
AcuI CTGAAG 3 cut(s) 549, 555, 666
AdeI CACNNNGTG 1 cut(s) 1235
AfaI GTAC 1 cut(s) 309
AfiI CCNNNNNNNGG 6 cut(s) 40, 102, 139, 559, 833, 953
AgsI TTSAA 2 cut(s) 910, 1353
AhdI GACNNNNNGTC 1 cut(s) 103
AjiI CACGTC 1 cut(s) 175
AjnI CCWGG 3 cut(s) 616, 832, 1120
AluBI AGCT 9 cut(s) 7, 85, 139, 533, 641, 1316, 1421, 1456, 1466
AluI AGCT 9 cut(s) 7, 85, 139, 533, 641, 1316, 1421, 1456, 1466
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 5 cut(s) 111, 267, 415, 908, 1249
AlwI GGATC 6 cut(s) 194, 234, 573, 586, 794, 826
AlwNI CAGNNNCTG 2 cut(s) 139, 1058
AoxI GGCC 4 cut(s) 524, 614, 1243, 1310
ApeKI GCWGC 4 cut(s) 136, 233, 809, 1456
ApoI RAATTY 4 cut(s) 1106, 1166, 1304, 1322
ArsI GACNNNNNNTTYG 2 cut(s) 699, 731
AspS9I GGNCC 3 cut(s) 851, 1243, 1310
AsuHPI GGTGA 4 cut(s) 182, 227, 590, 785
AvaII GGWCC 1 cut(s) 851
BaeI ACNNNNGTAYC 2 cut(s) 1197, 1230
BamHI GGATCC 1 cut(s) 578
BanI GGYRCC 1 cut(s) 994
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 543
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 4 cut(s) 148, 220, 796, 1443
BccI CCATC 1 cut(s) 955
BciT130I CCWGG 3 cut(s) 618, 834, 1122
BciVI GTATCC 2 cut(s) 525, 1225
BclI TGATCA 2 cut(s) 1327, 1369
BcoDI GTCTC 5 cut(s) 111, 267, 415, 908, 1249
BfaI CTAG 2 cut(s) 1007, 1422
BfmI CTRYAG 2 cut(s) 781, 810
BfuAI ACCTGC 2 cut(s) 774, 862
BfuI GTATCC 2 cut(s) 525, 1225
BisI GCNGC 6 cut(s) 126, 137, 166, 234, 810, 1457
BlpI GCTNAGC 1 cut(s) 86
BlsI GCNGC 6 cut(s) 127, 138, 167, 235, 811, 1458
Bme1390I CCNGG 3 cut(s) 618, 834, 1122
Bme18I GGWCC 1 cut(s) 851
BmeRI GACNNNNNGTC 1 cut(s) 103
BmgBI CACGTC 1 cut(s) 175
BmgT120I GGNCC 3 cut(s) 851, 1243, 1310
BmiI GGNNCC 4 cut(s) 580, 760, 960, 996
BmrFI CCNGG 3 cut(s) 618, 834, 1122
BmsI GCATC 3 cut(s) 268, 866, 930
BpiI GAAGAC 1 cut(s) 543
Bpu1102I GCTNAGC 1 cut(s) 86
BpuEI CTTGAG 3 cut(s) 539, 595, 936
Bsa29I ATCGAT 1 cut(s) 72
BsaBI GATNNNNATC 1 cut(s) 877
BsaI GGTCTC 2 cut(s) 111, 1249
BsaJI CCNNGG 2 cut(s) 617, 655
BsaWI WCCGGW 1 cut(s) 158
BsaXI ACNNNNNCTCC 8 cut(s) 134, 140, 164, 170, 719, 749, 1417, 1447
Bsc4I CCNNNNNNNGG 6 cut(s) 40, 102, 139, 559, 833, 953
Bse1I ACTGG 3 cut(s) 192, 518, 998
Bse3DI GCAATG 1 cut(s) 451
Bse8I GATNNNNATC 1 cut(s) 877
BseBI CCWGG 3 cut(s) 618, 834, 1122
BseCI ATCGAT 1 cut(s) 72
BseDI CCNNGG 2 cut(s) 617, 655
BseGI GGATG 3 cut(s) 629, 1192, 1330
BseJI GATNNNNATC 1 cut(s) 877
BseLI CCNNNNNNNGG 6 cut(s) 40, 102, 139, 559, 833, 953
BseMI GCAATG 1 cut(s) 451
BseMII CTCAG 3 cut(s) 100, 1065, 1223
BseNI ACTGG 3 cut(s) 192, 518, 998
BseRI GAGGAG 2 cut(s) 13, 285
BseXI GCAGC 4 cut(s) 148, 220, 796, 1443
BsgI GTGCAG 3 cut(s) 879, 1008, 1156
BshFI GGCC 4 cut(s) 526, 616, 1245, 1312
BshNI GGYRCC 1 cut(s) 994
BshVI ATCGAT 1 cut(s) 72
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 1 cut(s) 159
BslFI GGGAC 5 cut(s) 180, 720, 723, 1069, 1172
BslI CCNNNNNNNGG 6 cut(s) 40, 102, 139, 559, 833, 953
BsmAI GTCTC 5 cut(s) 111, 267, 415, 908, 1249
BsmBI CGTCTC 1 cut(s) 267
BsmFI GGGAC 5 cut(s) 180, 720, 723, 1069, 1172
BsnI GGCC 4 cut(s) 526, 616, 1245, 1312
Bso31I GGTCTC 2 cut(s) 111, 1249
Bsp1286I GDGCHC 1 cut(s) 9
Bsp1720I GCTNAGC 1 cut(s) 86
Bsp19I CCATGG 1 cut(s) 655
BspANI GGCC 4 cut(s) 526, 616, 1245, 1312
BspCNI CTCAG 3 cut(s) 99, 1064, 1224
BspDI ATCGAT 1 cut(s) 72
BspLI GGNNCC 4 cut(s) 580, 760, 960, 996
BspMAI CTGCAG 2 cut(s) 785, 814
BspMI ACCTGC 2 cut(s) 774, 862
BspPI GGATC 6 cut(s) 194, 234, 573, 586, 794, 826
BspT107I GGYRCC 1 cut(s) 994
BspTNI GGTCTC 2 cut(s) 111, 1249
BsrDI GCAATG 1 cut(s) 451
BsrI ACTGG 3 cut(s) 192, 518, 998
BssECI CCNNGG 2 cut(s) 617, 655
BssT1I CCWWGG 1 cut(s) 655
Bst2UI CCWGG 3 cut(s) 618, 834, 1122
Bst4CI ACNGT 5 cut(s) 114, 542, 1089, 1163, 1286
Bst6I CTCTTC 2 cut(s) 365, 432
BstC8I GCNNGC 5 cut(s) 643, 1019, 1023, 1247, 1314
BstDEI CTNAG 3 cut(s) 86, 1051, 1232
BstDSI CCRYGG 1 cut(s) 655
BstF5I GGATG 3 cut(s) 629, 1192, 1330
BstMAI GTCTC 5 cut(s) 111, 267, 415, 908, 1249
BstMWI GCNNNNNNNGC 3 cut(s) 299, 928, 1418
BstNI CCWGG 3 cut(s) 618, 834, 1122
BstNSI RCATGY 1 cut(s) 1021
BstSCI CCNGG 3 cut(s) 616, 832, 1120
BstSFI CTRYAG 2 cut(s) 781, 810
BstV1I GCAGC 4 cut(s) 148, 220, 796, 1443
BstV2I GAAGAC 1 cut(s) 543
BstX2I RGATCY 2 cut(s) 578, 818
BstYI RGATCY 2 cut(s) 578, 818
Bsu15I ATCGAT 1 cut(s) 72
BsuI GTATCC 2 cut(s) 525, 1225
BsuRI GGCC 4 cut(s) 526, 616, 1245, 1312
BsuTUI ATCGAT 1 cut(s) 72
BtgI CCRYGG 1 cut(s) 655
BtrI CACGTC 1 cut(s) 175
BtsCI GGATG 3 cut(s) 629, 1192, 1330
BtsIMutI CAGTG 3 cut(s) 525, 1229, 1393
BveI ACCTGC 2 cut(s) 774, 862
Cac8I GCNNGC 5 cut(s) 643, 1019, 1023, 1247, 1314
CaiI CAGNNNCTG 2 cut(s) 139, 1058
Cfr13I GGNCC 3 cut(s) 851, 1243, 1310
ClaI ATCGAT 1 cut(s) 72
Csp6I GTAC 1 cut(s) 308
CviAII CATG 2 cut(s) 656, 1018
CviQI GTAC 1 cut(s) 308
DdeI CTNAG 3 cut(s) 86, 1051, 1232
DraI TTTAAA 1 cut(s) 1171
DraIII CACNNNGTG 1 cut(s) 1235
DriI GACNNNNNGTC 1 cut(s) 103
Eam1104I CTCTTC 2 cut(s) 365, 432
Eam1105I GACNNNNNGTC 1 cut(s) 103
EarI CTCTTC 2 cut(s) 365, 432
EciI GGCGGA 4 cut(s) 317, 374, 380, 819
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 655
Eco147I AGGCCT 1 cut(s) 526
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 2 cut(s) 111, 1249
Eco47I GGWCC 1 cut(s) 851
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 3 cut(s) 549, 555, 666
EcoICRI GAGCTC 1 cut(s) 7
EcoO109I RGGNCCY 1 cut(s) 1243
EcoRI GAATTC 1 cut(s) 1106
EcoRII CCWGG 3 cut(s) 616, 832, 1120
EcoT14I CCWWGG 1 cut(s) 655
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 655
Esp3I CGTCTC 1 cut(s) 267
FaeI CATG 2 cut(s) 659, 1021
FaqI GGGAC 5 cut(s) 180, 720, 723, 1069, 1172
FatI CATG 2 cut(s) 655, 1017
FauI CCCGC 1 cut(s) 1405
FauNDI CATATG 1 cut(s) 1036
FbaI TGATCA 2 cut(s) 1327, 1369
Fnu4HI GCNGC 6 cut(s) 126, 137, 166, 234, 810, 1457
FokI GGATG 3 cut(s) 636, 1179, 1317
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 6 cut(s) 126, 137, 166, 234, 810, 1457
FspBI CTAG 2 cut(s) 1007, 1422
GluI GCNGC 6 cut(s) 126, 137, 166, 234, 810, 1457
HaeIII GGCC 4 cut(s) 526, 616, 1245, 1312
HapII CCGG 1 cut(s) 159
Hin1II CATG 2 cut(s) 659, 1021
HindIII AAGCTT 1 cut(s) 639
HinfI GANTC 3 cut(s) 14, 155, 916
HpaII CCGG 1 cut(s) 159
HphI GGTGA 4 cut(s) 182, 227, 590, 785
Hpy166II GTNNAC 2 cut(s) 117, 851
Hpy188I TCNGA 6 cut(s) 13, 97, 154, 823, 1206, 1266
Hpy188III TCNNGA 6 cut(s) 41, 197, 203, 556, 1007, 1367
Hpy8I GTNNAC 2 cut(s) 117, 851
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 6 cut(s) 323, 446, 478, 498, 681, 972
HpyCH4III ACNGT 5 cut(s) 114, 542, 1089, 1163, 1286
HpyCH4IV ACGT 1 cut(s) 174
HpyF10VI GCNNNNNNNGC 3 cut(s) 299, 928, 1418
HpyF3I CTNAG 3 cut(s) 86, 1051, 1232
HpySE526I ACGT 1 cut(s) 174
Hsp92II CATG 2 cut(s) 659, 1021
Ksp22I TGATCA 2 cut(s) 1327, 1369
LmnI GCTCC 3 cut(s) 4, 764, 1425
Lsp1109I GCAGC 4 cut(s) 148, 220, 796, 1443
LweI GCATC 3 cut(s) 268, 866, 930
MaeI CTAG 2 cut(s) 1007, 1422
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 4 cut(s) 170, 1235, 1335, 1388
MboII GAAGA 7 cut(s) 382, 446, 449, 461, 493, 548, 1341
MfeI CAATTG 1 cut(s) 583
MflI RGATCY 2 cut(s) 578, 818
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 9 cut(s) 565, 583, 697, 714, 1106, 1166, 1304, 1322, 1449
MlyI GAGTC 2 cut(s) 149, 910
MmeI TCCRAC 2 cut(s) 120, 177
MseI TTAA 6 cut(s) 594, 696, 789, 1148, 1170, 1343
MspA1I CMGCKG 2 cut(s) 139, 1456
MspI CCGG 1 cut(s) 159
MspR9I CCNGG 3 cut(s) 618, 834, 1122
MunI CAATTG 1 cut(s) 583
MvaI CCWGG 3 cut(s) 618, 834, 1122
MwoI GCNNNNNNNGC 3 cut(s) 299, 928, 1418
NcoI CCATGG 1 cut(s) 655
NdeI CATATG 1 cut(s) 1036
NlaIII CATG 2 cut(s) 659, 1021
NlaIV GGNNCC 4 cut(s) 580, 760, 960, 996
NmuCI GTSAC 3 cut(s) 170, 1235, 1388
NspI RCATGY 1 cut(s) 1021
PaeI GCATGC 1 cut(s) 1021
PceI AGGCCT 1 cut(s) 526
PcsI WCGNNNNNNNCGW 2 cut(s) 60, 237
PfeI GAWTC 1 cut(s) 14
PflMI CCANNNNNTGG 1 cut(s) 139
PkrI GCNGC 6 cut(s) 127, 138, 167, 235, 811, 1458
PleI GAGTC 2 cut(s) 149, 910
PpsI GAGTC 2 cut(s) 149, 910
PsiI TTATAA 1 cut(s) 1074
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 3 cut(s) 616, 832, 1120
PspGI CCWGG 3 cut(s) 616, 832, 1120
PspN4I GGNNCC 4 cut(s) 580, 760, 960, 996
PspPI GGNCC 3 cut(s) 851, 1243, 1310
PsrI GAACNNNNNNTAC 2 cut(s) 1429, 1461
PstI CTGCAG 2 cut(s) 785, 814
PstNI CAGNNNCTG 2 cut(s) 139, 1058
PsuI RGATCY 2 cut(s) 578, 818
PvuII CAGCTG 2 cut(s) 139, 1456
RsaI GTAC 1 cut(s) 309
RsaNI GTAC 1 cut(s) 308
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 6 cut(s) 594, 696, 789, 1148, 1170, 1343
SatI GCNGC 6 cut(s) 126, 137, 166, 234, 810, 1457
Sau96I GGNCC 3 cut(s) 851, 1243, 1310
SchI GAGTC 2 cut(s) 149, 910
ScrFI CCNGG 3 cut(s) 618, 834, 1122
SduI GDGCHC 1 cut(s) 9
SfaNI GCATC 3 cut(s) 268, 866, 930
SfcI CTRYAG 2 cut(s) 781, 810
SinI GGWCC 1 cut(s) 851
SmiI ATTTAAAT 1 cut(s) 1171
SmlI CTYRAG 3 cut(s) 554, 610, 951
SmoI CTYRAG 3 cut(s) 554, 610, 951
SphI GCATGC 1 cut(s) 1021
Sse9I AATT 9 cut(s) 565, 583, 697, 714, 1106, 1166, 1304, 1322, 1449
SseBI AGGCCT 1 cut(s) 526
SspI AATATT 1 cut(s) 1270
SspMI CTAG 2 cut(s) 1007, 1422
SstI GAGCTC 1 cut(s) 9
StuI AGGCCT 1 cut(s) 526
StyD4I CCNGG 3 cut(s) 616, 832, 1120
StyI CCWWGG 1 cut(s) 655
SwaI ATTTAAAT 1 cut(s) 1171
TaaI ACNGT 5 cut(s) 114, 542, 1089, 1163, 1286
TaiI ACGT 1 cut(s) 177
TaqI TCGA 3 cut(s) 72, 399, 718
TasI AATT 9 cut(s) 565, 583, 697, 714, 1106, 1166, 1304, 1322, 1449
TauI GCSGC 2 cut(s) 128, 168
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 6 cut(s) 594, 696, 789, 1148, 1170, 1343
Tru9I TTAA 6 cut(s) 594, 696, 789, 1148, 1170, 1343
TscAI CASTG 3 cut(s) 525, 1236, 1393
TseFI GTSAC 3 cut(s) 170, 1235, 1388
TseI GCWGC 4 cut(s) 136, 233, 809, 1456
Tsp45I GTSAC 3 cut(s) 170, 1235, 1388
TspDTI ATGAA 3 cut(s) 426, 462, 1119
TspGWI ACGGA 2 cut(s) 420, 1323
TspRI CASTG 3 cut(s) 525, 1236, 1393
Van91I CCANNNNNTGG 1 cut(s) 139
VpaK11BI GGWCC 1 cut(s) 851
XapI RAATTY 4 cut(s) 1106, 1166, 1304, 1322
XbaI TCTAGA 1 cut(s) 1006
XceI RCATGY 1 cut(s) 1021
XspI CTAG 2 cut(s) 1007, 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.