Rh7AG118400

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000602
Physical Location & Seq
Reverse (-)
9285170 .. 9288576
3407 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG118400.1

Sequence Viewer

Length: 1524 bp
ATGGAGCTGTCTGAATCGTCGTCCTCCTCCTCCTCTGTTTCCCCAAATCTGGATTTGCATATCGGCAACAGCAACGAAATCGATCAGGTTCAGCTCAACCATTCCGACATAGGGTCTCAACAGTCCACCACCGCCGCCAACCAGCAGCTGGACAATCCCTCCGACTCCGGTGGTGACGCGGCGGTCTGTCATTCCAGTCCCGATCCCGAGGTCGTGGATCACGCTGTCGTTGTTGATGAGATTGAGAGATTGGATTTGAGAGGAGACGATGCTGATGATGTAGCGGTGGAGGTGGCGGCAGCAGCCGAGGTAGAGGAAGGAGGAGAGGTTGAGGCGGAGGAGAGTTCTAACGGTGGTGGAGAAATCGAAAACGGAAATGAAAGTGAGAGACAGAGCGAGGAAGAAGAGAGCAATGAAGGAGAAAACAGGAGTGAGAATGGAGAGAAGAAGGGGGGAGAATATAACACAAGGTATCAGTATCCAGTGAGGCCTGAAGCTGAAGACTGCTCCTTTTACCTCAAGACGGGGAATTGCAAGTTTGGATCCAACTGCAAGTTTAATCACCCTGTTAGAAGGAAAAACAACCAGGTTTTTAAAGACAAGGTGAAGGAAAAGGACGAGTTTTCAGAGAAGCCAAGCCAGACAGAATGCAAGTATTACTTAAGGCCAGGGGGATGTAAGTATGGGAAAGCTTGCAGATACAACCATGGAAAAGGGAAACCTTCGGTTGCTCCAGTTGTGGAACTTAACTTTCTGGGACTGCCAATTCGACAGGGGGAGAGAGAGTGTCCCTACTATATGCGAAATGGCTCCTGCAAGTATGGATCAAACTGCAGGTTTAATCACCCTGATCCTACTGCTGCAGGAGGATCTGACCCTCCGTCTGGATTTGATAATGGTGGACCTGCATCATTACAAGGTGGATTGCAATCATCATCTTGGTCTGCACCAAGATCATTGAATGAGACTCCGCTTTATATGCCAATGATGATGCCACCATCTCAAGGGGTTCCTTCCCAAAATACAGAATGGAATGGCTATCAGGCACCAGTTTATCTAGAAAGAAGCATGGCTGCACCTCCACCATATGTTATCAACAACTCAGGGACCGAAACCAATGTTTATAAACAATATCCACCGTCAAATCAAGTTGATGAATTCCCAGAACGACCTGGACAACCTTTGTGCAGTTTCTTTTTAAGAACAGGGGACTGTAAGTTTAAATCTAACTGCAAATATCATCATCCAAAAAGTCAGACTGCAGTATCCCCCTCATTTGCACTGAGTGACAAGGGCCTGCCTTTGAGACCAGATCAGAATATTTGCACCCATTACAGTCGCTATGGCATTTGCAAATTTGGGCCAGCTTGTAAATTTGATCATCCGTTACATTTAACATCTTCAACTACATCTGGTCTTGATCATCAACTTCCTTTCAGTGACTTGGCAAATACAAAAGAGGCGGGAATAGCTAGGAGCAGAAGTGGAACTGATGATACAATTCAGCTGCAACAAGCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

507

Amino Acids

55.44

Weight (kDa)

5.01

Isoelectric Point (pI)

61.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 167 - 189 3.2e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 214 - 238 7.5e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 259 - 283 2.4e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4 PF18345 263 - 282 8.2e-06 Zinc finger domain
zf-CCCH_4 PF18044 263 - 283 3.3e-07 CCCH-type zinc finger
zf-CCCH PF00642 391 - 417 4e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 438 - 462 1.2e-08 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1125
AasI GACNNNNNNGTC 1 cut(s) 182
Acc36I ACCTGC 2 cut(s) 825, 913
AccB1I GGYRCC 1 cut(s) 1045
AccB7I CCANNNNNTGG 1 cut(s) 148
AccII CGCG 1 cut(s) 179
AciI CCGC 9 cut(s) 132, 135, 179, 182, 284, 296, 335, 971, 1463
AclWI GGATC 7 cut(s) 197, 225, 537, 550, 832, 845, 877
AcsI RAATTY 3 cut(s) 1157, 1355, 1373
AcuI CTGAAG 2 cut(s) 513, 519
AdeI CACNNNGTG 1 cut(s) 1286
AfiI CCNNNNNNNGG 6 cut(s) 49, 111, 148, 523, 884, 1004
AflII CTTAAG 1 cut(s) 661
AgsI TTSAA 2 cut(s) 961, 1404
AhdI GACNNNNNGTC 2 cut(s) 112, 880
AjnI CCWGG 3 cut(s) 585, 667, 1171
AluBI AGCT 9 cut(s) 7, 94, 148, 497, 692, 1367, 1472, 1507, 1517
AluI AGCT 9 cut(s) 7, 94, 148, 497, 692, 1367, 1472, 1507, 1517
Alw26I GTCTC 5 cut(s) 120, 258, 382, 959, 1300
AlwI GGATC 7 cut(s) 197, 225, 537, 550, 832, 845, 877
AlwNI CAGNNNCTG 1 cut(s) 148
Ama87I CYCGRG 1 cut(s) 206
AoxI GGCC 4 cut(s) 488, 665, 1294, 1361
ApeKI GCWGC 6 cut(s) 145, 299, 302, 860, 1073, 1507
ApoI RAATTY 3 cut(s) 1157, 1355, 1373
ArsI GACNNNNNNTTYG 2 cut(s) 750, 782
AspS9I GGNCC 4 cut(s) 902, 1107, 1294, 1361
AsuHPI GGTGA 4 cut(s) 185, 554, 616, 836
AvaI CYCGRG 1 cut(s) 206
AvaII GGWCC 2 cut(s) 902, 1107
BaeI ACNNNNGTAYC 2 cut(s) 1248, 1281
BamHI GGATCC 1 cut(s) 542
BanI GGYRCC 1 cut(s) 1045
BbsI GAAGAC 1 cut(s) 507
BbvI GCAGC 6 cut(s) 157, 311, 314, 847, 1060, 1494
BccI CCATC 1 cut(s) 1006
BcgI CGANNNNNNTGC 2 cut(s) 61, 95
BciT130I CCWGG 3 cut(s) 587, 669, 1173
BciVI GTATCC 2 cut(s) 489, 1276
BclI TGATCA 2 cut(s) 1378, 1420
BcoDI GTCTC 5 cut(s) 120, 258, 382, 959, 1300
BfaI CTAG 2 cut(s) 1058, 1473
BfmI CTRYAG 3 cut(s) 832, 861, 1260
BfrI CTTAAG 1 cut(s) 661
BfuAI ACCTGC 2 cut(s) 825, 913
BfuI GTATCC 2 cut(s) 489, 1276
BisI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 861, 1074, 1508
BlsI GCNGC 9 cut(s) 136, 147, 181, 298, 301, 304, 862, 1075, 1509
Bme1390I CCNGG 3 cut(s) 587, 669, 1173
Bme18I GGWCC 2 cut(s) 902, 1107
BmeRI GACNNNNNGTC 2 cut(s) 112, 880
BmeT110I CYCGRG 1 cut(s) 206
BmgT120I GGNCC 4 cut(s) 902, 1107, 1294, 1361
BmiI GGNNCC 5 cut(s) 544, 811, 1011, 1047, 1108
BmrFI CCNGG 3 cut(s) 587, 669, 1173
BmsI GCATC 3 cut(s) 259, 917, 981
BpiI GAAGAC 1 cut(s) 507
BpmI CTGGAG 1 cut(s) 717
BpuEI CTTGAG 2 cut(s) 503, 987
Bsa29I ATCGAT 1 cut(s) 81
BsaBI GATNNNNATC 1 cut(s) 928
BsaI GGTCTC 2 cut(s) 120, 1300
BsaJI CCNNGG 4 cut(s) 207, 306, 668, 706
BsaWI WCCGGW 1 cut(s) 167
BsaXI ACNNNNNCTCC 8 cut(s) 143, 173, 312, 342, 770, 800, 1468, 1498
Bsc4I CCNNNNNNNGG 6 cut(s) 49, 111, 148, 523, 884, 1004
Bse1I ACTGG 4 cut(s) 195, 482, 734, 1049
Bse3DI GCAATG 1 cut(s) 418
Bse8I GATNNNNATC 1 cut(s) 928
BseBI CCWGG 3 cut(s) 587, 669, 1173
BseCI ATCGAT 1 cut(s) 81
BseDI CCNNGG 4 cut(s) 207, 306, 668, 706
BseGI GGATG 3 cut(s) 680, 1243, 1381
BseJI GATNNNNATC 1 cut(s) 928
BseLI CCNNNNNNNGG 6 cut(s) 49, 111, 148, 523, 884, 1004
BseMI GCAATG 1 cut(s) 418
BseMII CTCAG 2 cut(s) 1116, 1274
BseNI ACTGG 4 cut(s) 195, 482, 734, 1049
BseRI GAGGAG 6 cut(s) 16, 19, 22, 276, 336, 353
BseXI GCAGC 6 cut(s) 157, 311, 314, 847, 1060, 1494
BsgI GTGCAG 3 cut(s) 930, 1059, 1207
Bsh1236I CGCG 1 cut(s) 179
BshFI GGCC 4 cut(s) 490, 667, 1296, 1363
BshNI GGYRCC 1 cut(s) 1045
BshVI ATCGAT 1 cut(s) 81
BsiHKCI CYCGRG 1 cut(s) 206
BsiSI CCGG 1 cut(s) 168
BslFI GGGAC 5 cut(s) 183, 771, 774, 1120, 1223
BslI CCNNNNNNNGG 6 cut(s) 49, 111, 148, 523, 884, 1004
BsmAI GTCTC 5 cut(s) 120, 258, 382, 959, 1300
BsmBI CGTCTC 1 cut(s) 258
BsmFI GGGAC 5 cut(s) 183, 771, 774, 1120, 1223
BsmI GAATGC 1 cut(s) 653
BsnI GGCC 4 cut(s) 490, 667, 1296, 1363
Bso31I GGTCTC 2 cut(s) 120, 1300
BsoBI CYCGRG 1 cut(s) 206
Bsp19I CCATGG 1 cut(s) 706
BspACI CCGC 9 cut(s) 132, 135, 179, 182, 284, 296, 335, 971, 1463
BspANI GGCC 4 cut(s) 490, 667, 1296, 1363
BspCNI CTCAG 2 cut(s) 1115, 1275
BspDI ATCGAT 1 cut(s) 81
BspFNI CGCG 1 cut(s) 179
BspLI GGNNCC 5 cut(s) 544, 811, 1011, 1047, 1108
BspMAI CTGCAG 3 cut(s) 836, 865, 1264
BspMI ACCTGC 2 cut(s) 825, 913
BspPI GGATC 7 cut(s) 197, 225, 537, 550, 832, 845, 877
BspT107I GGYRCC 1 cut(s) 1045
BspTI CTTAAG 1 cut(s) 661
BspTNI GGTCTC 2 cut(s) 120, 1300
BsrDI GCAATG 1 cut(s) 418
BsrI ACTGG 4 cut(s) 195, 482, 734, 1049
BssECI CCNNGG 4 cut(s) 207, 306, 668, 706
BssT1I CCWWGG 1 cut(s) 706
Bst2UI CCWGG 3 cut(s) 587, 669, 1173
Bst4CI ACNGT 5 cut(s) 123, 353, 1140, 1214, 1337
Bst6I CTCTTC 1 cut(s) 399
BstAFI CTTAAG 1 cut(s) 661
BstC8I GCNNGC 3 cut(s) 694, 1298, 1365
BstDEI CTNAG 2 cut(s) 1102, 1283
BstDSI CCRYGG 1 cut(s) 706
BstF5I GGATG 3 cut(s) 680, 1243, 1381
BstFNI CGCG 1 cut(s) 179
BstMAI GTCTC 5 cut(s) 120, 258, 382, 959, 1300
BstMWI GCNNNNNNNGC 3 cut(s) 302, 979, 1469
BstNI CCWGG 3 cut(s) 587, 669, 1173
BstSCI CCNGG 3 cut(s) 585, 667, 1171
BstSFI CTRYAG 3 cut(s) 832, 861, 1260
BstUI CGCG 1 cut(s) 179
BstV1I GCAGC 6 cut(s) 157, 311, 314, 847, 1060, 1494
BstV2I GAAGAC 1 cut(s) 507
BstX2I RGATCY 2 cut(s) 542, 869
BstYI RGATCY 2 cut(s) 542, 869
Bsu15I ATCGAT 1 cut(s) 81
BsuI GTATCC 2 cut(s) 489, 1276
BsuRI GGCC 4 cut(s) 490, 667, 1296, 1363
BsuTUI ATCGAT 1 cut(s) 81
BtgI CCRYGG 1 cut(s) 706
BtsCI GGATG 3 cut(s) 680, 1243, 1381
BtsIMutI CAGTG 3 cut(s) 489, 1280, 1444
BveI ACCTGC 2 cut(s) 825, 913
Cac8I GCNNGC 3 cut(s) 694, 1298, 1365
CaiI CAGNNNCTG 1 cut(s) 148
Cfr13I GGNCC 4 cut(s) 902, 1107, 1294, 1361
ClaI ATCGAT 1 cut(s) 81
CseI GACGC 1 cut(s) 185
CsiI ACCWGGT 1 cut(s) 585
CviAII CATG 2 cut(s) 707, 1069
DdeI CTNAG 2 cut(s) 1102, 1283
DraI TTTAAA 2 cut(s) 595, 1222
DraIII CACNNNGTG 1 cut(s) 1286
DrdI GACNNNNNNGTC 1 cut(s) 182
DriI GACNNNNNGTC 2 cut(s) 112, 880
DseDI GACNNNNNNGTC 1 cut(s) 182
Eam1104I CTCTTC 1 cut(s) 399
Eam1105I GACNNNNNGTC 2 cut(s) 112, 880
EarI CTCTTC 1 cut(s) 399
EciI GGCGGA 1 cut(s) 350
Eco130I CCWWGG 1 cut(s) 706
Eco147I AGGCCT 1 cut(s) 490
Eco31I GGTCTC 2 cut(s) 120, 1300
Eco47I GGWCC 2 cut(s) 902, 1107
Eco57I CTGAAG 2 cut(s) 513, 519
Eco88I CYCGRG 1 cut(s) 206
EcoO109I RGGNCCY 1 cut(s) 1294
EcoRI GAATTC 1 cut(s) 1157
EcoRII CCWGG 3 cut(s) 585, 667, 1171
EcoT14I CCWWGG 1 cut(s) 706
ErhI CCWWGG 1 cut(s) 706
Esp3I CGTCTC 1 cut(s) 258
FaeI CATG 2 cut(s) 710, 1072
FalI AAGNNNNNCTT 2 cut(s) 644, 676
FaqI GGGAC 5 cut(s) 183, 771, 774, 1120, 1223
FatI CATG 2 cut(s) 706, 1068
FauI CCCGC 1 cut(s) 1456
FauNDI CATATG 1 cut(s) 1087
FbaI TGATCA 2 cut(s) 1378, 1420
Fnu4HI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 861, 1074, 1508
FokI GGATG 3 cut(s) 687, 1230, 1368
Fsp4HI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 861, 1074, 1508
FspBI CTAG 2 cut(s) 1058, 1473
GluI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 861, 1074, 1508
GsuI CTGGAG 1 cut(s) 717
HaeIII GGCC 4 cut(s) 490, 667, 1296, 1363
HapII CCGG 1 cut(s) 168
HgaI GACGC 1 cut(s) 185
Hin1II CATG 2 cut(s) 710, 1072
HindIII AAGCTT 1 cut(s) 690
HinfI GANTC 3 cut(s) 14, 164, 967
HpaII CCGG 1 cut(s) 168
HphI GGTGA 4 cut(s) 185, 554, 616, 836
Hpy166II GTNNAC 2 cut(s) 126, 902
Hpy188I TCNGA 7 cut(s) 13, 106, 163, 628, 874, 1257, 1317
Hpy188III TCNNGA 7 cut(s) 50, 200, 206, 520, 885, 1058, 1418
Hpy8I GTNNAC 2 cut(s) 126, 902
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 7 cut(s) 311, 410, 442, 567, 601, 732, 1023
HpyCH4III ACNGT 5 cut(s) 123, 353, 1140, 1214, 1337
HpyF10VI GCNNNNNNNGC 3 cut(s) 302, 979, 1469
HpyF3I CTNAG 2 cut(s) 1102, 1283
Hsp92II CATG 2 cut(s) 710, 1072
Ksp22I TGATCA 2 cut(s) 1378, 1420
LmnI GCTCC 5 cut(s) 4, 512, 736, 815, 1476
Lsp1109I GCAGC 6 cut(s) 157, 311, 314, 847, 1060, 1494
LweI GCATC 3 cut(s) 259, 917, 981
MabI ACCWGGT 1 cut(s) 585
MaeI CTAG 2 cut(s) 1058, 1473
MaeIII GTNAC 4 cut(s) 173, 1286, 1386, 1439
MboII GAAGA 5 cut(s) 413, 416, 457, 512, 1392
MflI RGATCY 2 cut(s) 542, 869
MluCI AATT 6 cut(s) 529, 765, 1157, 1355, 1373, 1500
MlyI GAGTC 2 cut(s) 158, 961
MmeI TCCRAC 3 cut(s) 129, 186, 570
MseI TTAA 8 cut(s) 558, 594, 662, 747, 840, 1199, 1221, 1394
MspA1I CMGCKG 2 cut(s) 148, 1507
MspCI CTTAAG 1 cut(s) 661
MspI CCGG 1 cut(s) 168
MspR9I CCNGG 3 cut(s) 587, 669, 1173
Mva1269I GAATGC 1 cut(s) 653
MvaI CCWGG 3 cut(s) 587, 669, 1173
MvnI CGCG 1 cut(s) 179
MwoI GCNNNNNNNGC 3 cut(s) 302, 979, 1469
NcoI CCATGG 1 cut(s) 706
NdeI CATATG 1 cut(s) 1087
NlaIII CATG 2 cut(s) 710, 1072
NlaIV GGNNCC 5 cut(s) 544, 811, 1011, 1047, 1108
NmeAIII GCCGAG 1 cut(s) 331
NmuCI GTSAC 3 cut(s) 173, 1286, 1439
PceI AGGCCT 1 cut(s) 490
PctI GAATGC 1 cut(s) 653
PfeI GAWTC 1 cut(s) 14
PflMI CCANNNNNTGG 1 cut(s) 148
PkrI GCNGC 9 cut(s) 136, 147, 181, 298, 301, 304, 862, 1075, 1509
PleI GAGTC 2 cut(s) 158, 961
PpsI GAGTC 2 cut(s) 158, 961
PsiI TTATAA 1 cut(s) 1125
Psp6I CCWGG 3 cut(s) 585, 667, 1171
PspGI CCWGG 3 cut(s) 585, 667, 1171
PspN4I GGNNCC 5 cut(s) 544, 811, 1011, 1047, 1108
PspPI GGNCC 4 cut(s) 902, 1107, 1294, 1361
PsrI GAACNNNNNNTAC 2 cut(s) 1480, 1512
PstI CTGCAG 3 cut(s) 836, 865, 1264
PstNI CAGNNNCTG 1 cut(s) 148
PsuI RGATCY 2 cut(s) 542, 869
PvuII CAGCTG 2 cut(s) 148, 1507
SaqAI TTAA 8 cut(s) 558, 594, 662, 747, 840, 1199, 1221, 1394
SatI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 861, 1074, 1508
Sau96I GGNCC 4 cut(s) 902, 1107, 1294, 1361
SchI GAGTC 2 cut(s) 158, 961
ScrFI CCNGG 3 cut(s) 587, 669, 1173
SexAI ACCWGGT 1 cut(s) 585
SfaNI GCATC 3 cut(s) 259, 917, 981
SfcI CTRYAG 3 cut(s) 832, 861, 1260
SinI GGWCC 2 cut(s) 902, 1107
SmlI CTYRAG 3 cut(s) 518, 661, 1002
SmoI CTYRAG 3 cut(s) 518, 661, 1002
Sse9I AATT 6 cut(s) 529, 765, 1157, 1355, 1373, 1500
SseBI AGGCCT 1 cut(s) 490
SsiI CCGC 9 cut(s) 132, 135, 179, 182, 284, 296, 335, 971, 1463
SspI AATATT 1 cut(s) 1321
SspMI CTAG 2 cut(s) 1058, 1473
StuI AGGCCT 1 cut(s) 490
StyD4I CCNGG 3 cut(s) 585, 667, 1171
StyI CCWWGG 1 cut(s) 706
TaaI ACNGT 5 cut(s) 123, 353, 1140, 1214, 1337
TaqI TCGA 3 cut(s) 81, 366, 769
TaqII GACCGA 1 cut(s) 1124
TasI AATT 6 cut(s) 529, 765, 1157, 1355, 1373, 1500
TauI GCSGC 3 cut(s) 137, 182, 299
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 8 cut(s) 558, 594, 662, 747, 840, 1199, 1221, 1394
Tru9I TTAA 8 cut(s) 558, 594, 662, 747, 840, 1199, 1221, 1394
TscAI CASTG 3 cut(s) 489, 1287, 1444
TseFI GTSAC 3 cut(s) 173, 1286, 1439
TseI GCWGC 6 cut(s) 145, 299, 302, 860, 1073, 1507
Tsp45I GTSAC 3 cut(s) 173, 1286, 1439
TspDTI ATGAA 3 cut(s) 393, 429, 1170
TspGWI ACGGA 3 cut(s) 387, 870, 1374
TspRI CASTG 3 cut(s) 489, 1287, 1444
Van91I CCANNNNNTGG 1 cut(s) 148
Vha464I CTTAAG 1 cut(s) 661
VpaK11BI GGWCC 2 cut(s) 902, 1107
XapI RAATTY 3 cut(s) 1157, 1355, 1373
XbaI TCTAGA 1 cut(s) 1057
XcmI CCANNNNNNNNNTGG 1 cut(s) 145
XspI CTAG 2 cut(s) 1058, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.