Prupe.5G159100_v2.0.a1

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000602
Physical Location & Seq
Reverse (-)
14078252 .. 14081491
3240 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G159100.2

Sequence Viewer

Length: 1491 bp
ATGGAAGTCTCTGAAGCTATCTCTGTTCCCCCAAATCTCGATGCCAACAACAACCACCACATCGATGAGCACCACCAACCCAGCCATTCCGAACTAGTGTTTCTGCCTTCTTCCTCCGATCCCGATCCCGCACCGTCTGATTTCGATCATGCGGTCCTTGATGAGCTTCAGAAGCTGGATTTGAAGGAGAAGGAGGAGGAGGAGGAGGGGGAGGATCACCTTGATGAGTTTCAGAAACTGGATTTGAAAGAGAAGGAGGATGCCAAAGAAGAAGAAGAAGAAGAGGATGTAGAGAAGAAGAGTTCTAATGGGCGAGAAACTGAAAATGAAAACGAAAACGAAAATGAAAGTGAGAGGCAGAGTGAACAAAGCGATGGAGGAGAAAACCAGAGTGAGGATGGTGGTGATGCAGAGAAGAAGGCCGAGGAAAGTAGAAGAAGATATCAGTACCCAGTGAGGCCTGAAGCTGAAGACTGTTCTTATTATCTGAAGACCGGGTCTTGTAAGTTTGGGTCCAATTGCAAGTTTAATCACCCTGTTAAAAGGAAGGGGTCTAAGGACAAGGTGAAGGAAAGGGAAGAGTTTGGAGATAAGACAGGCCAGACAGAATGCAAGTATTACTTGAGGTCAGGCGGATGTAAGTATGGAAAAGCTTGTAGATACAGCCACAGCAAAGGGAAACCTTCTGTAGCTCCAGTTGTAGAACTAAACTTTCTGGGTCTGCCAATTCGACTGGGGGAGAGAGAGTGTCCCTACTATATGCGAAACGGATCCTGCAAGTATGCATCGAACTGCAGGTTTAACCACCCTGATCCTACAGCTGCCGGAGGATCTGATCCAGCGTCCGCATTTGGTAATGGTGGCCCTGCATCCTTGCAAGGTGCGCCACAATCAACAGTAGCCCCGTGGTCTGCACCAAGATCATTGAATGAGACTCCACCTTACATGCCAATGATGATTCCACCATCTCAAGGGGTTCCTTCCCAAAATACAGAATGGAATGGTTATCAGGCCCCAGCATATCTACCAGAAAGAAGCATGCCCGCACGTCAACCATATCTTATGAACAACTCAATGACTGAAACCAACATCTATAAACAATACCCACAGCACCAGCAAGCTGAAGAATTCCCGGAAAGACCTGGCCAACCTTTTTGCAGTTATTTCTTAAGAACCGGTGATTGTAAGTTTAAATCTAACTGCAAATATCACCATCCGAAAACTCAGACTGCAGTATCCCCCCAATGTGCGCTTAGTGACAAGGGCCTCCCTTTGAGACCGGATCAGAACATTTGCACACATTACAGTCGCTATGGCATTTGCAAATTTGGGCCAGTGTGTAAATTTGACCATCCGTTAAATATAACATCTTCAACTACATCTGGTCCTGATCATCAACTTCCTTTCAGTGACTCGGCGACTACGAATGGGGCTGGAACAGCTGGGAGCAGAAGTGGAACTGATGCTATAAGTCATCCGCAGCCTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

497

Amino Acids

55.29

Weight (kDa)

5.25

Isoelectric Point (pI)

67.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 786
AciI CCGC 6 cut(s) 129, 152, 633, 846, 1044, 1478
AclWI GGATC 9 cut(s) 113, 119, 222, 765, 778, 806, 830, 838, 1290
AcoI YGGCCR 1 cut(s) 1144
AcsI RAATTY 3 cut(s) 1127, 1325, 1343
AcuI CTGAAG 6 cut(s) 33, 152, 483, 489, 509, 1143
AfaI GTAC 1 cut(s) 449
AfiI CCNNNNNNNGG 2 cut(s) 394, 971
AflII CTTAAG 1 cut(s) 1168
AgeI ACCGGT 1 cut(s) 1175
AgsI TTSAA 4 cut(s) 184, 247, 928, 1374
AhlI ACTAGT 1 cut(s) 94
AjiI CACGTC 1 cut(s) 1049
AjnI CCWGG 1 cut(s) 1141
AluBI AGCT 9 cut(s) 17, 166, 175, 467, 653, 692, 821, 1121, 1442
AluI AGCT 9 cut(s) 17, 166, 175, 467, 653, 692, 821, 1121, 1442
Alw21I GWGCWC 1 cut(s) 72
Alw26I GTCTC 3 cut(s) 13, 926, 1270
AlwI GGATC 9 cut(s) 113, 119, 222, 765, 778, 806, 830, 838, 1290
AlwNI CAGNNNCTG 2 cut(s) 175, 238
AoxI GGCC 8 cut(s) 420, 458, 598, 862, 1011, 1144, 1264, 1331
ApeKI GCWGC 2 cut(s) 821, 1480
ApoI RAATTY 3 cut(s) 1127, 1325, 1343
AsiGI ACCGGT 1 cut(s) 1175
AspLEI GCGC 2 cut(s) 886, 1252
AspS9I GGNCC 7 cut(s) 154, 513, 863, 1012, 1264, 1331, 1385
AsuC2I CCSGG 2 cut(s) 496, 1133
AsuHPI GGTGA 6 cut(s) 209, 416, 524, 577, 1190, 1202
AvaII GGWCC 3 cut(s) 154, 513, 1385
BaeI ACNNNNGTAYC 2 cut(s) 1218, 1251
BalI TGGCCA 1 cut(s) 1146
BamHI GGATCC 1 cut(s) 770
BbsI GAAGAC 2 cut(s) 477, 497
Bbv12I GWGCWC 1 cut(s) 72
BbvI GCAGC 1 cut(s) 808
BccI CCATC 5 cut(s) 368, 392, 973, 1221, 1359
BciT130I CCWGG 1 cut(s) 1143
BciVI GTATCC 1 cut(s) 1246
BclI TGATCA 1 cut(s) 1390
BcnI CCSGG 2 cut(s) 496, 1133
BcoDI GTCTC 3 cut(s) 13, 926, 1270
BcuI ACTAGT 1 cut(s) 94
BfaI CTAG 1 cut(s) 95
BfmI CTRYAG 4 cut(s) 687, 793, 816, 1230
BfrI CTTAAG 1 cut(s) 1168
BfuAI ACCTGC 1 cut(s) 786
BfuI GTATCC 1 cut(s) 1246
BisI GCNGC 2 cut(s) 822, 1481
BlsI GCNGC 2 cut(s) 823, 1482
Bme1390I CCNGG 3 cut(s) 496, 1133, 1143
Bme18I GGWCC 3 cut(s) 154, 513, 1385
BmgBI CACGTC 1 cut(s) 1049
BmgT120I GGNCC 7 cut(s) 154, 513, 863, 1012, 1264, 1331, 1385
BmiI GGNNCC 4 cut(s) 514, 772, 978, 1014
BmrFI CCNGG 3 cut(s) 496, 1133, 1143
BmrI ACTGGG 2 cut(s) 446, 743
BmsI GCATC 6 cut(s) 31, 250, 397, 794, 878, 1453
BmuI ACTGGG 2 cut(s) 446, 743
BpiI GAAGAC 2 cut(s) 477, 497
BpmI CTGGAG 1 cut(s) 678
BpuEI CTTGAG 2 cut(s) 643, 954
BpuMI CCSGG 2 cut(s) 496, 1133
Bsa29I ATCGAT 1 cut(s) 63
BsaBI GATNNNNATC 2 cut(s) 123, 144
BsaI GGTCTC 1 cut(s) 1270
BsaJI CCNNGG 2 cut(s) 423, 905
BsaWI WCCGGW 2 cut(s) 1175, 1279
BsaXI ACNNNNNCTCC 4 cut(s) 731, 761, 1438, 1468
Bsc4I CCNNNNNNNGG 2 cut(s) 394, 971
Bse118I RCCGGY 1 cut(s) 1175
Bse1I ACTGG 5 cut(s) 243, 452, 695, 738, 1334
Bse8I GATNNNNATC 2 cut(s) 123, 144
BseBI CCWGG 1 cut(s) 1143
BseCI ATCGAT 1 cut(s) 63
BseDI CCNNGG 2 cut(s) 423, 905
BseGI GGATG 8 cut(s) 265, 292, 403, 641, 869, 1213, 1351, 1474
BseJI GATNNNNATC 2 cut(s) 123, 144
BseLI CCNNNNNNNGG 2 cut(s) 394, 971
BseMII CTCAG 1 cut(s) 1238
BseNI ACTGG 5 cut(s) 243, 452, 695, 738, 1334
BseRI GAGGAG 5 cut(s) 209, 212, 215, 218, 393
BseXI GCAGC 1 cut(s) 808
BseYI CCCAGC 3 cut(s) 80, 1015, 1442
BsgI GTGCAG 1 cut(s) 897
BshFI GGCC 8 cut(s) 422, 460, 600, 864, 1013, 1146, 1266, 1333
BshTI ACCGGT 1 cut(s) 1175
BshVI ATCGAT 1 cut(s) 63
BsiHKAI GWGCWC 1 cut(s) 72
BsiSI CCGG 5 cut(s) 495, 825, 1133, 1176, 1280
BslFI GGGAC 1 cut(s) 735
BslI CCNNNNNNNGG 2 cut(s) 394, 971
BsmAI GTCTC 3 cut(s) 13, 926, 1270
BsmFI GGGAC 1 cut(s) 735
BsmI GAATGC 1 cut(s) 614
BsnI GGCC 8 cut(s) 422, 460, 600, 864, 1013, 1146, 1266, 1333
Bso31I GGTCTC 1 cut(s) 1270
Bsp1286I GDGCHC 1 cut(s) 72
BspACI CCGC 6 cut(s) 129, 152, 633, 846, 1044, 1478
BspANI GGCC 8 cut(s) 422, 460, 600, 864, 1013, 1146, 1266, 1333
BspCNI CTCAG 1 cut(s) 1237
BspDI ATCGAT 1 cut(s) 63
BspLI GGNNCC 4 cut(s) 514, 772, 978, 1014
BspMAI CTGCAG 2 cut(s) 797, 1234
BspMI ACCTGC 1 cut(s) 786
BspPI GGATC 9 cut(s) 113, 119, 222, 765, 778, 806, 830, 838, 1290
BspTI CTTAAG 1 cut(s) 1168
BspTNI GGTCTC 1 cut(s) 1270
BsrFI RCCGGY 1 cut(s) 1175
BsrI ACTGG 5 cut(s) 243, 452, 695, 738, 1334
BssAI RCCGGY 1 cut(s) 1175
BssECI CCNNGG 2 cut(s) 423, 905
Bst2UI CCWGG 1 cut(s) 1143
Bst4CI ACNGT 4 cut(s) 135, 476, 898, 1307
Bst6I CTCTTC 3 cut(s) 276, 293, 573
BstAFI CTTAAG 1 cut(s) 1168
BstC8I GCNNGC 3 cut(s) 1040, 1044, 1119
BstDEI CTNAG 3 cut(s) 555, 1224, 1253
BstDSI CCRYGG 1 cut(s) 905
BstF5I GGATG 8 cut(s) 265, 292, 403, 641, 869, 1213, 1351, 1474
BstHHI GCGC 2 cut(s) 886, 1252
BstMAI GTCTC 3 cut(s) 13, 926, 1270
BstMWI GCNNNNNNNGC 3 cut(s) 172, 883, 1439
BstNI CCWGG 1 cut(s) 1143
BstNSI RCATGY 2 cut(s) 949, 1042
BstSCI CCNGG 3 cut(s) 494, 1131, 1141
BstSFI CTRYAG 4 cut(s) 687, 793, 816, 1230
BstV1I GCAGC 1 cut(s) 808
BstV2I GAAGAC 2 cut(s) 477, 497
BstX2I RGATCY 2 cut(s) 770, 830
BstYI RGATCY 2 cut(s) 770, 830
Bsu15I ATCGAT 1 cut(s) 63
BsuI GTATCC 1 cut(s) 1246
BsuRI GGCC 8 cut(s) 422, 460, 600, 864, 1013, 1146, 1266, 1333
BsuTUI ATCGAT 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 905
BtgZI GCGATG 1 cut(s) 387
BtrI CACGTC 1 cut(s) 1049
BtsCI GGATG 8 cut(s) 265, 292, 403, 641, 869, 1213, 1351, 1474
BtsIMutI CAGTG 3 cut(s) 459, 1341, 1414
BveI ACCTGC 1 cut(s) 786
Cac8I GCNNGC 3 cut(s) 1040, 1044, 1119
CaiI CAGNNNCTG 2 cut(s) 175, 238
CfoI GCGC 2 cut(s) 886, 1252
Cfr10I RCCGGY 1 cut(s) 1175
Cfr13I GGNCC 7 cut(s) 154, 513, 863, 1012, 1264, 1331, 1385
ClaI ATCGAT 1 cut(s) 63
CseI GACGC 1 cut(s) 831
Csp6I GTAC 1 cut(s) 448
CspAI ACCGGT 1 cut(s) 1175
CviAII CATG 3 cut(s) 149, 946, 1039
CviQI GTAC 1 cut(s) 448
DdeI CTNAG 3 cut(s) 555, 1224, 1253
DraI TTTAAA 1 cut(s) 1192
EaeI YGGCCR 1 cut(s) 1144
Eam1104I CTCTTC 3 cut(s) 276, 293, 573
EarI CTCTTC 3 cut(s) 276, 293, 573
EciI GGCGGA 1 cut(s) 648
Eco147I AGGCCT 1 cut(s) 460
Eco31I GGTCTC 1 cut(s) 1270
Eco32I GATATC 1 cut(s) 443
Eco47I GGWCC 3 cut(s) 154, 513, 1385
Eco57I CTGAAG 6 cut(s) 33, 152, 483, 489, 509, 1143
EcoO109I RGGNCCY 2 cut(s) 1012, 1264
EcoRI GAATTC 1 cut(s) 1127
EcoRII CCWGG 1 cut(s) 1141
EcoRV GATATC 1 cut(s) 443
EcoT22I ATGCAT 1 cut(s) 787
FaeI CATG 3 cut(s) 152, 949, 1042
FalI AAGNNNNNCTT 2 cut(s) 605, 637
FaqI GGGAC 1 cut(s) 735
FatI CATG 3 cut(s) 148, 945, 1038
FauI CCCGC 2 cut(s) 136, 1051
FbaI TGATCA 1 cut(s) 1390
Fnu4HI GCNGC 2 cut(s) 822, 1481
FokI GGATG 8 cut(s) 272, 299, 410, 648, 856, 1200, 1338, 1461
Fsp4HI GCNGC 2 cut(s) 822, 1481
FspBI CTAG 1 cut(s) 95
GlaI GCGC 2 cut(s) 885, 1251
GluI GCNGC 2 cut(s) 822, 1481
GsaI CCCAGC 3 cut(s) 84, 1019, 1446
GsuI CTGGAG 1 cut(s) 678
HaeIII GGCC 8 cut(s) 422, 460, 600, 864, 1013, 1146, 1266, 1333
HapII CCGG 5 cut(s) 495, 825, 1133, 1176, 1280
HgaI GACGC 1 cut(s) 831
HhaI GCGC 2 cut(s) 886, 1252
Hin1II CATG 3 cut(s) 152, 949, 1042
Hin6I GCGC 2 cut(s) 884, 1250
HinP1I GCGC 2 cut(s) 884, 1250
HincII GTYRAC 1 cut(s) 1052
HindII GTYRAC 1 cut(s) 1052
HindIII AAGCTT 1 cut(s) 651
HinfI GANTC 3 cut(s) 934, 958, 1412
HpaII CCGG 5 cut(s) 495, 825, 1133, 1176, 1280
HphI GGTGA 6 cut(s) 209, 416, 524, 577, 1190, 1202
Hpy166II GTNNAC 2 cut(s) 365, 1052
Hpy188III TCNNGA 3 cut(s) 38, 122, 1388
Hpy8I GTNNAC 2 cut(s) 365, 1052
HpyAV CCTTC 9 cut(s) 117, 178, 184, 247, 412, 541, 562, 693, 990
HpyCH4III ACNGT 4 cut(s) 135, 476, 898, 1307
HpyCH4IV ACGT 1 cut(s) 1048
HpyF10VI GCNNNNNNNGC 3 cut(s) 172, 883, 1439
HpyF3I CTNAG 3 cut(s) 555, 1224, 1253
HpySE526I ACGT 1 cut(s) 1048
Hsp92II CATG 3 cut(s) 152, 949, 1042
HspAI GCGC 2 cut(s) 884, 1250
Ksp22I TGATCA 1 cut(s) 1390
LmnI GCTCC 2 cut(s) 697, 1446
Lsp1109I GCAGC 1 cut(s) 808
LweI GCATC 6 cut(s) 31, 250, 397, 794, 878, 1453
MaeI CTAG 1 cut(s) 95
MaeII ACGT 1 cut(s) 1048
MaeIII GTNAC 2 cut(s) 1256, 1409
MfeI CAATTG 1 cut(s) 517
MflI RGATCY 2 cut(s) 770, 830
MhlI GDGCHC 1 cut(s) 72
MlsI TGGCCA 1 cut(s) 1146
MluCI AATT 5 cut(s) 517, 726, 1127, 1325, 1343
MluNI TGGCCA 1 cut(s) 1146
MlyI GAGTC 2 cut(s) 928, 1406
Mox20I TGGCCA 1 cut(s) 1146
Mph1103I ATGCAT 1 cut(s) 787
MscI TGGCCA 1 cut(s) 1146
MseI TTAA 6 cut(s) 528, 540, 801, 1169, 1191, 1358
MslI CAYNNNNRTG 3 cut(s) 63, 222, 950
Msp20I TGGCCA 1 cut(s) 1146
MspA1I CMGCKG 2 cut(s) 821, 1442
MspCI CTTAAG 1 cut(s) 1168
MspI CCGG 5 cut(s) 495, 825, 1133, 1176, 1280
MspR9I CCNGG 3 cut(s) 496, 1133, 1143
MunI CAATTG 1 cut(s) 517
Mva1269I GAATGC 1 cut(s) 614
MvaI CCWGG 1 cut(s) 1143
MwoI GCNNNNNNNGC 3 cut(s) 172, 883, 1439
NciI CCSGG 2 cut(s) 496, 1133
NlaIII CATG 3 cut(s) 152, 949, 1042
NlaIV GGNNCC 4 cut(s) 514, 772, 978, 1014
NmeAIII GCCGAG 2 cut(s) 448, 1394
NmuCI GTSAC 2 cut(s) 1256, 1409
NsiI ATGCAT 1 cut(s) 787
NspI RCATGY 2 cut(s) 949, 1042
PaeI GCATGC 1 cut(s) 1042
PceI AGGCCT 1 cut(s) 460
PcsI WCGNNNNNNNCGW 1 cut(s) 1421
PctI GAATGC 1 cut(s) 614
PfeI GAWTC 1 cut(s) 958
PflFI GACNNNGTC 1 cut(s) 496
PfoI TCCNGGA 1 cut(s) 1131
PinAI ACCGGT 1 cut(s) 1175
PkrI GCNGC 2 cut(s) 823, 1482
PleI GAGTC 2 cut(s) 928, 1406
PpsI GAGTC 2 cut(s) 928, 1406
Psp6I CCWGG 1 cut(s) 1141
PspFI CCCAGC 3 cut(s) 80, 1015, 1442
PspGI CCWGG 1 cut(s) 1141
PspN4I GGNNCC 4 cut(s) 514, 772, 978, 1014
PspPI GGNCC 7 cut(s) 154, 513, 863, 1012, 1264, 1331, 1385
PstI CTGCAG 2 cut(s) 797, 1234
PstNI CAGNNNCTG 2 cut(s) 175, 238
PsuI RGATCY 2 cut(s) 770, 830
PsyI GACNNNGTC 1 cut(s) 496
PvuII CAGCTG 2 cut(s) 821, 1442
RsaI GTAC 1 cut(s) 449
RsaNI GTAC 1 cut(s) 448
RseI CAYNNNNRTG 3 cut(s) 63, 222, 950
SaqAI TTAA 6 cut(s) 528, 540, 801, 1169, 1191, 1358
SatI GCNGC 2 cut(s) 822, 1481
Sau96I GGNCC 7 cut(s) 154, 513, 863, 1012, 1264, 1331, 1385
SchI GAGTC 2 cut(s) 928, 1406
ScrFI CCNGG 3 cut(s) 496, 1133, 1143
SduI GDGCHC 1 cut(s) 72
SfaNI GCATC 6 cut(s) 31, 250, 397, 794, 878, 1453
SfcI CTRYAG 4 cut(s) 687, 793, 816, 1230
SinI GGWCC 3 cut(s) 154, 513, 1385
SmiMI CAYNNNNRTG 3 cut(s) 63, 222, 950
SmlI CTYRAG 3 cut(s) 622, 969, 1168
SmoI CTYRAG 3 cut(s) 622, 969, 1168
SpeI ACTAGT 1 cut(s) 94
SphI GCATGC 1 cut(s) 1042
Sse9I AATT 5 cut(s) 517, 726, 1127, 1325, 1343
SseBI AGGCCT 1 cut(s) 460
SsiI CCGC 6 cut(s) 129, 152, 633, 846, 1044, 1478
SspMI CTAG 1 cut(s) 95
StuI AGGCCT 1 cut(s) 460
StyD4I CCNGG 3 cut(s) 494, 1131, 1141
TaaI ACNGT 4 cut(s) 135, 476, 898, 1307
TaiI ACGT 1 cut(s) 1051
TaqI TCGA 5 cut(s) 39, 63, 144, 730, 788
TasI AATT 5 cut(s) 517, 726, 1127, 1325, 1343
TfiI GAWTC 1 cut(s) 958
Tru1I TTAA 6 cut(s) 528, 540, 801, 1169, 1191, 1358
Tru9I TTAA 6 cut(s) 528, 540, 801, 1169, 1191, 1358
TscAI CASTG 3 cut(s) 459, 1341, 1414
TseFI GTSAC 2 cut(s) 1256, 1409
TseI GCWGC 2 cut(s) 821, 1480
Tsp45I GTSAC 2 cut(s) 1256, 1409
TspDTI ATGAA 3 cut(s) 342, 360, 1079
TspGWI ACGGA 2 cut(s) 783, 1344
TspRI CASTG 3 cut(s) 459, 1341, 1414
Tth111I GACNNNGTC 1 cut(s) 496
Vha464I CTTAAG 1 cut(s) 1168
VpaK11BI GGWCC 3 cut(s) 154, 513, 1385
XapI RAATTY 3 cut(s) 1127, 1325, 1343
XceI RCATGY 2 cut(s) 949, 1042
XcmI CCANNNNNNNNNTGG 1 cut(s) 395
XspI CTAG 1 cut(s) 95
Zsp2I ATGCAT 1 cut(s) 787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.