Rh7DG121300

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000602
Physical Location & Seq
Reverse (-)
10306297 .. 10310255
3959 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG121300.1

Sequence Viewer

Length: 1374 bp
ATGGAGCTCTCTGAATCGTCCTCCTCCTCCTCTGTTTCCCCAAATCTGGATTTGGATACCGGCGACAGCAACGAAATCGATCAGGTTCAGCTCAACCATTCCGACATAGGGTCTCAACAGTCCACCACCACCGCCGCCTACCAGCAGCTGGACAGTCCCTCCGACTCCGGTGGTGAGGCGGCGGTCAGTCATTCCAGTCCCGATCCCGAGGTCGTGGATCACGCTGTCGTCGTTGTTGATGAGATTGAGAGATTGGATTTGAGAGGAGACGATGCTGATGTAGCGGTGGAGGTGGCGGCGGCGGCGGCGGCAGACGAGGTAGAGGAAGGGGGAGAGGTTGAGGCGGAGAAGAGTTCTAATGGTGGTGGAGAAATCGAAAACGGAAATGAAAGCGAGAGACAGAGCGAGGAAGAAGAGAGCAATGAAGGAGAAACCAGGAGTGAGAATGGAGAGAAGAAGGGGGGAGAATATAACAGAAGGTATCAGTATCCGGTGAGGCCTGAAGCTGAAGACTGCTCCTTTTACCTCAAGACGGGGAATTGCAAGTTTGGATCCAACTGCAAGTTTAATCACCCTGTTAGAAGGAAAAACAACCAGGTTTTTAAAGACAAGGTGAAGGAAAAGGACGAGTTTTCAGAGAAGCCAAGCCTGACAGAATGCAAGTATTACTTGAGGCCAGGGGGATGTAAGTATGGGAAAGCTTGCAGATACAACCATGGAAAAGGGAAACCTTTGGTTGCTCCAGTTGTGGAACTTAACTTTCTGGGACTGCCAATTCGACAGGGGGAGAGAGAGTGTCCCTACTATATGCGAAATGGCTCCTGCAAGTATGGATCAAACTGCAGGTTTAATCACCCTGATCCTACTGCTGCAGGAGGATCTGACCCTCCGTCTGGATTTGATAATGGTGGACCTGCATTATTACAAGGTGGATTGCAATCATCATCTTGGTCTGCACCAAGATCATTGAATGAGACTCCGCTTTATATGCCAATGATGATGCCACCATCTCAAGGGGTTCCTTCCCAAAATACAGAATGGAATGGCTATCAGGCACCAGTTTATCTAGAAAGAAGTATGCCTGCACCTCCACCATATGTTATCAACAACTCAGGGACCGAAACCAATGTTTATAAAAAATATCCACCGTCAAATCAAGTTGATGAATTCCCAGAACGACCTGGACAACCTTTGTGCAGTTTCTTTTTAAGAACAGGGGACTGTAAGTTTAAATCTAACTGCAAATATCATCATCCAAAAAGTCAGACTGCAGTATCCCCCTCATTTGCACTGAGTGACAAGGGCCTGCCTTTGAGACCAGTAAGTTCACATTCTTTGGATTTATTATCCTTTTTTCCTTTTTTCTTCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

457

Amino Acids

50.16

Weight (kDa)

4.92

Isoelectric Point (pI)

60.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 170 - 192 2.8e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 218 - 241 4.4e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 262 - 286 2.1e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4 PF18345 266 - 285 7.3e-06 Zinc finger domain
zf-CCCH_4 PF18044 266 - 286 2.9e-07 CCCH-type zinc finger
zf-CCCH PF00642 394 - 420 3.6e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1134
Acc36I ACCTGC 2 cut(s) 834, 922
AccB1I GGYRCC 1 cut(s) 1054
AccB7I CCANNNNNTGG 1 cut(s) 148
AclWI GGATC 7 cut(s) 197, 225, 546, 559, 841, 854, 886
AcsI RAATTY 1 cut(s) 1166
AcuI CTGAAG 2 cut(s) 522, 528
AdeI CACNNNGTG 1 cut(s) 1295
AfiI CCNNNNNNNGG 6 cut(s) 46, 108, 148, 532, 893, 1013
AgsI TTSAA 1 cut(s) 970
AhdI GACNNNNNGTC 2 cut(s) 109, 889
AjnI CCWGG 4 cut(s) 434, 594, 676, 1180
AluBI AGCT 5 cut(s) 7, 91, 148, 506, 701
AluI AGCT 5 cut(s) 7, 91, 148, 506, 701
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 5 cut(s) 117, 261, 391, 968, 1309
AlwI GGATC 7 cut(s) 197, 225, 546, 559, 841, 854, 886
AlwNI CAGNNNCTG 1 cut(s) 148
Ama87I CYCGRG 1 cut(s) 206
AoxI GGCC 3 cut(s) 497, 674, 1303
ApeKI GCWGC 2 cut(s) 145, 869
ApoI RAATTY 1 cut(s) 1166
ArsI GACNNNNNNTTYG 2 cut(s) 759, 791
AspS9I GGNCC 3 cut(s) 911, 1116, 1303
AsuHPI GGTGA 5 cut(s) 185, 505, 563, 625, 845
AvaI CYCGRG 1 cut(s) 206
AvaII GGWCC 2 cut(s) 911, 1116
BaeI ACNNNNGTAYC 2 cut(s) 1257, 1290
BamHI GGATCC 1 cut(s) 551
BanI GGYRCC 1 cut(s) 1054
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 516
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 2 cut(s) 157, 856
BccI CCATC 1 cut(s) 1015
BcgI CGANNNNNNTGC 2 cut(s) 58, 92
BciT130I CCWGG 4 cut(s) 436, 596, 678, 1182
BciVI GTATCC 3 cut(s) 49, 498, 1285
BcoDI GTCTC 5 cut(s) 117, 261, 391, 968, 1309
BfaI CTAG 1 cut(s) 1067
BfmI CTRYAG 3 cut(s) 841, 870, 1269
BfuAI ACCTGC 2 cut(s) 834, 922
BfuI GTATCC 3 cut(s) 49, 498, 1285
BisI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 306, 309, 870
BlsI GCNGC 9 cut(s) 136, 147, 181, 298, 301, 304, 307, 310, 871
Bme1390I CCNGG 4 cut(s) 436, 596, 678, 1182
Bme18I GGWCC 2 cut(s) 911, 1116
BmeRI GACNNNNNGTC 2 cut(s) 109, 889
BmeT110I CYCGRG 1 cut(s) 206
BmgT120I GGNCC 3 cut(s) 911, 1116, 1303
BmiI GGNNCC 5 cut(s) 553, 820, 1020, 1056, 1117
BmrFI CCNGG 4 cut(s) 436, 596, 678, 1182
BmsI GCATC 2 cut(s) 262, 990
BpiI GAAGAC 1 cut(s) 516
BpmI CTGGAG 1 cut(s) 726
BpuEI CTTGAG 3 cut(s) 512, 691, 996
Bsa29I ATCGAT 1 cut(s) 78
BsaBI GATNNNNATC 1 cut(s) 937
BsaI GGTCTC 2 cut(s) 117, 1309
BsaJI CCNNGG 3 cut(s) 207, 677, 715
BsaWI WCCGGW 2 cut(s) 167, 490
BsaXI ACNNNNNCTCC 4 cut(s) 143, 173, 779, 809
Bsc4I CCNNNNNNNGG 6 cut(s) 46, 108, 148, 532, 893, 1013
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 4 cut(s) 195, 743, 1058, 1319
Bse3DI GCAATG 1 cut(s) 427
Bse8I GATNNNNATC 1 cut(s) 937
BseBI CCWGG 4 cut(s) 436, 596, 678, 1182
BseCI ATCGAT 1 cut(s) 78
BseDI CCNNGG 3 cut(s) 207, 677, 715
BseGI GGATG 2 cut(s) 689, 1252
BseJI GATNNNNATC 1 cut(s) 937
BseLI CCNNNNNNNGG 6 cut(s) 46, 108, 148, 532, 893, 1013
BseMI GCAATG 1 cut(s) 427
BseMII CTCAG 2 cut(s) 1125, 1283
BseNI ACTGG 4 cut(s) 195, 743, 1058, 1319
BseRI GAGGAG 4 cut(s) 13, 16, 19, 279
BseXI GCAGC 2 cut(s) 157, 856
BsgI GTGCAG 3 cut(s) 939, 1068, 1216
BshFI GGCC 3 cut(s) 499, 676, 1305
BshNI GGYRCC 1 cut(s) 1054
BshVI ATCGAT 1 cut(s) 78
BsiHKAI GWGCWC 1 cut(s) 9
BsiHKCI CYCGRG 1 cut(s) 206
BsiSI CCGG 3 cut(s) 60, 168, 491
BslFI GGGAC 6 cut(s) 141, 183, 780, 783, 1129, 1232
BslI CCNNNNNNNGG 6 cut(s) 46, 108, 148, 532, 893, 1013
BsmAI GTCTC 5 cut(s) 117, 261, 391, 968, 1309
BsmBI CGTCTC 1 cut(s) 261
BsmFI GGGAC 6 cut(s) 141, 183, 780, 783, 1129, 1232
BsmI GAATGC 1 cut(s) 662
BsnI GGCC 3 cut(s) 499, 676, 1305
Bso31I GGTCTC 2 cut(s) 117, 1309
BsoBI CYCGRG 1 cut(s) 206
Bsp1286I GDGCHC 1 cut(s) 9
Bsp143I GATC 8 cut(s) 79, 202, 217, 551, 833, 859, 878, 962
Bsp19I CCATGG 1 cut(s) 715
BspANI GGCC 3 cut(s) 499, 676, 1305
BspCNI CTCAG 2 cut(s) 1124, 1284
BspDI ATCGAT 1 cut(s) 78
BspLI GGNNCC 5 cut(s) 553, 820, 1020, 1056, 1117
BspMAI CTGCAG 3 cut(s) 845, 874, 1273
BspMI ACCTGC 2 cut(s) 834, 922
BspPI GGATC 7 cut(s) 197, 225, 546, 559, 841, 854, 886
BspT107I GGYRCC 1 cut(s) 1054
BspTNI GGTCTC 2 cut(s) 117, 1309
BsrDI GCAATG 1 cut(s) 427
BsrFI RCCGGY 1 cut(s) 59
BsrI ACTGG 4 cut(s) 195, 743, 1058, 1319
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 3 cut(s) 207, 677, 715
BssMI GATC 8 cut(s) 79, 202, 217, 551, 833, 859, 878, 962
BssT1I CCWWGG 1 cut(s) 715
Bst2UI CCWGG 4 cut(s) 436, 596, 678, 1182
Bst4CI ACNGT 4 cut(s) 120, 155, 1149, 1223
Bst6I CTCTTC 2 cut(s) 344, 408
BstC8I GCNNGC 3 cut(s) 703, 1083, 1307
BstDEI CTNAG 2 cut(s) 1111, 1292
BstDSI CCRYGG 1 cut(s) 715
BstF5I GGATG 2 cut(s) 689, 1252
BstKTI GATC 8 cut(s) 82, 205, 220, 554, 836, 862, 881, 965
BstMAI GTCTC 5 cut(s) 117, 261, 391, 968, 1309
BstMBI GATC 8 cut(s) 79, 202, 217, 551, 833, 859, 878, 962
BstMWI GCNNNNNNNGC 5 cut(s) 281, 302, 305, 308, 988
BstNI CCWGG 4 cut(s) 436, 596, 678, 1182
BstSCI CCNGG 4 cut(s) 434, 594, 676, 1180
BstSFI CTRYAG 3 cut(s) 841, 870, 1269
BstV1I GCAGC 2 cut(s) 157, 856
BstV2I GAAGAC 1 cut(s) 516
BstX2I RGATCY 2 cut(s) 551, 878
BstYI RGATCY 2 cut(s) 551, 878
Bsu15I ATCGAT 1 cut(s) 78
BsuI GTATCC 3 cut(s) 49, 498, 1285
BsuRI GGCC 3 cut(s) 499, 676, 1305
BsuTUI ATCGAT 1 cut(s) 78
BtgI CCRYGG 1 cut(s) 715
BtsCI GGATG 2 cut(s) 689, 1252
BtsIMutI CAGTG 1 cut(s) 1289
BveI ACCTGC 2 cut(s) 834, 922
Cac8I GCNNGC 3 cut(s) 703, 1083, 1307
CaiI CAGNNNCTG 1 cut(s) 148
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 3 cut(s) 911, 1116, 1303
ClaI ATCGAT 1 cut(s) 78
CsiI ACCWGGT 1 cut(s) 594
CviAII CATG 1 cut(s) 716
DdeI CTNAG 2 cut(s) 1111, 1292
DpnI GATC 8 cut(s) 81, 204, 219, 553, 835, 861, 880, 964
DpnII GATC 8 cut(s) 79, 202, 217, 551, 833, 859, 878, 962
DraI TTTAAA 2 cut(s) 604, 1231
DraIII CACNNNGTG 1 cut(s) 1295
DriI GACNNNNNGTC 2 cut(s) 109, 889
Eam1104I CTCTTC 2 cut(s) 344, 408
Eam1105I GACNNNNNGTC 2 cut(s) 109, 889
EarI CTCTTC 2 cut(s) 344, 408
EciI GGCGGA 1 cut(s) 359
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 715
Eco147I AGGCCT 1 cut(s) 499
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 2 cut(s) 117, 1309
Eco47I GGWCC 2 cut(s) 911, 1116
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 2 cut(s) 522, 528
Eco88I CYCGRG 1 cut(s) 206
EcoICRI GAGCTC 1 cut(s) 7
EcoO109I RGGNCCY 1 cut(s) 1303
EcoRI GAATTC 1 cut(s) 1166
EcoRII CCWGG 4 cut(s) 434, 594, 676, 1180
EcoT14I CCWWGG 1 cut(s) 715
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 715
Esp3I CGTCTC 1 cut(s) 261
FaeI CATG 1 cut(s) 719
FalI AAGNNNNNCTT 2 cut(s) 653, 685
FaqI GGGAC 6 cut(s) 141, 183, 780, 783, 1129, 1232
FatI CATG 1 cut(s) 715
FauNDI CATATG 1 cut(s) 1096
Fnu4HI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 306, 309, 870
FokI GGATG 2 cut(s) 696, 1239
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 306, 309, 870
FspBI CTAG 1 cut(s) 1067
GluI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 306, 309, 870
GsuI CTGGAG 1 cut(s) 726
HaeIII GGCC 3 cut(s) 499, 676, 1305
HapII CCGG 3 cut(s) 60, 168, 491
Hin1II CATG 1 cut(s) 719
HindIII AAGCTT 1 cut(s) 699
HinfI GANTC 3 cut(s) 14, 164, 976
HpaII CCGG 3 cut(s) 60, 168, 491
HphI GGTGA 5 cut(s) 185, 505, 563, 625, 845
Hpy166II GTNNAC 3 cut(s) 123, 911, 1328
Hpy188I TCNGA 6 cut(s) 13, 103, 163, 637, 883, 1266
Hpy188III TCNNGA 6 cut(s) 47, 200, 206, 529, 894, 1067
Hpy8I GTNNAC 3 cut(s) 123, 911, 1328
Hpy99I CGWCG 1 cut(s) 233
HpyAV CCTTC 7 cut(s) 320, 419, 451, 471, 576, 610, 1032
HpyCH4III ACNGT 4 cut(s) 120, 155, 1149, 1223
HpyF10VI GCNNNNNNNGC 5 cut(s) 281, 302, 305, 308, 988
HpyF3I CTNAG 2 cut(s) 1111, 1292
Hsp92II CATG 1 cut(s) 719
Kzo9I GATC 8 cut(s) 79, 202, 217, 551, 833, 859, 878, 962
LmnI GCTCC 4 cut(s) 4, 521, 745, 824
Lsp1109I GCAGC 2 cut(s) 157, 856
LweI GCATC 2 cut(s) 262, 990
MabI ACCWGGT 1 cut(s) 594
MaeI CTAG 1 cut(s) 1067
MaeIII GTNAC 1 cut(s) 1295
MalI GATC 8 cut(s) 81, 204, 219, 553, 835, 861, 880, 964
MboI GATC 8 cut(s) 79, 202, 217, 551, 833, 859, 878, 962
MboII GAAGA 6 cut(s) 361, 422, 425, 466, 521, 1357
MflI RGATCY 2 cut(s) 551, 878
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 3 cut(s) 538, 774, 1166
MlyI GAGTC 2 cut(s) 158, 970
MmeI TCCRAC 3 cut(s) 126, 186, 579
MseI TTAA 6 cut(s) 567, 603, 756, 849, 1208, 1230
MspA1I CMGCKG 1 cut(s) 148
MspI CCGG 3 cut(s) 60, 168, 491
MspR9I CCNGG 4 cut(s) 436, 596, 678, 1182
Mva1269I GAATGC 1 cut(s) 662
MvaI CCWGG 4 cut(s) 436, 596, 678, 1182
MwoI GCNNNNNNNGC 5 cut(s) 281, 302, 305, 308, 988
NcoI CCATGG 1 cut(s) 715
NdeI CATATG 1 cut(s) 1096
NdeII GATC 8 cut(s) 79, 202, 217, 551, 833, 859, 878, 962
NlaIII CATG 1 cut(s) 719
NlaIV GGNNCC 5 cut(s) 553, 820, 1020, 1056, 1117
NmuCI GTSAC 1 cut(s) 1295
PceI AGGCCT 1 cut(s) 499
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PctI GAATGC 1 cut(s) 662
PfeI GAWTC 1 cut(s) 14
PflMI CCANNNNNTGG 1 cut(s) 148
PkrI GCNGC 9 cut(s) 136, 147, 181, 298, 301, 304, 307, 310, 871
PleI GAGTC 2 cut(s) 158, 970
PpsI GAGTC 2 cut(s) 158, 970
PsiI TTATAA 1 cut(s) 1134
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 4 cut(s) 434, 594, 676, 1180
PspGI CCWGG 4 cut(s) 434, 594, 676, 1180
PspN4I GGNNCC 5 cut(s) 553, 820, 1020, 1056, 1117
PspPI GGNCC 3 cut(s) 911, 1116, 1303
PstI CTGCAG 3 cut(s) 845, 874, 1273
PstNI CAGNNNCTG 1 cut(s) 148
PsuI RGATCY 2 cut(s) 551, 878
PvuII CAGCTG 1 cut(s) 148
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 6 cut(s) 567, 603, 756, 849, 1208, 1230
SatI GCNGC 9 cut(s) 135, 146, 180, 297, 300, 303, 306, 309, 870
Sau3AI GATC 8 cut(s) 79, 202, 217, 551, 833, 859, 878, 962
Sau96I GGNCC 3 cut(s) 911, 1116, 1303
SchI GAGTC 2 cut(s) 158, 970
ScrFI CCNGG 4 cut(s) 436, 596, 678, 1182
SduI GDGCHC 1 cut(s) 9
SexAI ACCWGGT 1 cut(s) 594
SfaNI GCATC 2 cut(s) 262, 990
SfcI CTRYAG 3 cut(s) 841, 870, 1269
SinI GGWCC 2 cut(s) 911, 1116
SmlI CTYRAG 3 cut(s) 527, 670, 1011
SmoI CTYRAG 3 cut(s) 527, 670, 1011
Sse9I AATT 3 cut(s) 538, 774, 1166
SseBI AGGCCT 1 cut(s) 499
SspMI CTAG 1 cut(s) 1067
SstI GAGCTC 1 cut(s) 9
StuI AGGCCT 1 cut(s) 499
StyD4I CCNGG 4 cut(s) 434, 594, 676, 1180
StyI CCWWGG 1 cut(s) 715
TaaI ACNGT 4 cut(s) 120, 155, 1149, 1223
TaqI TCGA 3 cut(s) 78, 375, 778
TaqII GACCGA 1 cut(s) 1133
TasI AATT 3 cut(s) 538, 774, 1166
TauI GCSGC 7 cut(s) 137, 182, 299, 302, 305, 308, 311
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 6 cut(s) 567, 603, 756, 849, 1208, 1230
Tru9I TTAA 6 cut(s) 567, 603, 756, 849, 1208, 1230
TscAI CASTG 1 cut(s) 1296
TseFI GTSAC 1 cut(s) 1295
TseI GCWGC 2 cut(s) 145, 869
Tsp45I GTSAC 1 cut(s) 1295
TspDTI ATGAA 3 cut(s) 402, 438, 1179
TspGWI ACGGA 2 cut(s) 396, 879
TspRI CASTG 1 cut(s) 1296
Van91I CCANNNNNTGG 1 cut(s) 148
VpaK11BI GGWCC 2 cut(s) 911, 1116
XapI RAATTY 1 cut(s) 1166
XbaI TCTAGA 1 cut(s) 1066
XspI CTAG 1 cut(s) 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.