Rh7BG120400

zinc finger CCCH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000602
Physical Location & Seq
Reverse (-)
8979045 .. 8982978
3934 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG120400.1

Sequence Viewer

Length: 1359 bp
ATGGAGCTCTCTGAATCGTCCTCCTCCTCCTCCTCTGTTTCCCCAAATCTGGATTTGCATATCGGCAGCAGCAACGAAATCGATCAGGTTCAGCTCAACCATTCCGACATAGGGTCTCAACAGTCCACCACCACCGCCGCCTACCAGCAGCTGGACAATCACCACTCCGACTCCGGTGGTGACGCGGCGGTTAGTCATTCCGGTCCCGATCCCGATGTTGCTGCTGATGTCGTGGATCACGCTGTCGTCGTTGATGAGATTGAGAGATTGGATTTGAGAGGAGACGACGATGCTGTTGTAGCGGTGGAGGTGGAGGTGGCGGCAGCGGAGGTAGAGGAGAAGAAAGAGGAAGGAGGAGAGGTTGAGGCGGAGGAGAAGAGTTCTAATGGTGGTGGTGGAGGTGGAGAAATCGAAAACGGAAATGAAAGTGAGAGACAAAGCGAGGAAGAAGAGAGCAATGAAGGAGAAAACAGGAGTGAGAATGGAGAGAAGAAGGGGGGAGAATATAACAGAAGGTATCAGTATCCAGTGAGGCCTGAAGCTGAAGACTGTTCCTTTTACCTCAAGACGGGGAATTGCAAGTTTGGATCCAACTGCAAGTTTAATCACCCTGTTAGAAGGAAAAACAACCAGGGTTTTAAAGACAAGGTGAAGGAAAAGGACGAGTTTTCAGAGAAGCCAAGCCAGACAGAATGCAAGTATTACTTAAGGCCAGGGGGATGTAAGTATGGGAAAGCTTGCAGATACAACCATGGAAAAGGGAAACCTTTGGTTGCTCCAGTTGTGGAACTTAACTTTCTGGGACTGCCAATTCGACAGGGGGAGAGAGAGTGTCCCTACTATATGCGAAATGGCTCCTGCAAGTATGGATCAAACTGCAGGTTTAATCACCCTGATCCTACTGCTGCAGGAGGATCTGACCCTCCATCTGGATTTGATAATGGTGGACCTGCATCATTACAAGGTGGATCGCAATTATCATCTTGGTCTGCACCAAGATCATTGAATGAGACTCCGCTTTATATGCCAATGATGATGCCACCATCTCAAGGGGTTCCTTCCCAAAATACAGAATGGAATGGCTATCAGGCACCAGTTTATCTAGAAAGAAGCATGCCTGCACCTCCACCATATGTTATCAACAACTCAGGGACCGAAACCAATGTTTATAAACAATATCCACCGTCAAATCAAGTTGATGAATTCCCAGAACGACCTGGACAACCTTTGTGCAGTTTCTTTTTAAGAACAGGGGACTGTAAGTTTAAATCTAACTGCAAATATCATCATCCAAAAAGTCAGACTGCAGTATCCCCCTCATTTGCACTGAGTGACAAGGGCCTGCCTTTGAGACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-CCCH zf-CCCH_2

Protein Analysis

452

Amino Acids

49.41

Weight (kDa)

5.0

Isoelectric Point (pI)

59.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCCH PF00642 182 - 204 2.8e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 229 - 253 6.5e-06 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf-CCCH PF00642 274 - 298 2.1e-10 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
zf_CCCH_4 PF18345 278 - 297 7.2e-06 Zinc finger domain
zf-CCCH_4 PF18044 278 - 298 2.9e-07 CCCH-type zinc finger
zf-CCCH PF00642 406 - 432 3.5e-07 Zinc finger C-x8-C-x5-C-x3-H type (and similar)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G48195 AT3G48440 AT5G63260 AT5G63260
fragaria_vesca FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100 FvH4_5g07100
malus_domestica MD06G1158800.v1.1 MD06G1159000.v1.1 MD06G1159200.v1.1 MD14G1165100.v1.1 MD14G1165300.v1.1 MD14G1165400.v1.1 MD14G1165500.v1.1
prunus_persica Prupe.5G158300_v2.0.a1 Prupe.5G158300_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158400_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158500_v2.0.a1 Prupe.5G158600_v2.0.a1 Prupe.5G158700_v2.0.a1 Prupe.5G158800_v2.0.a1 Prupe.5G158900_v2.0.a1 Prupe.5G159000_v2.0.a1 Prupe.5G159100_v2.0.a1 Prupe.5G159100_v2.0.a1
pyrus_communis pycom02g00910 pycom06g14200 pycom14g13760 pycom14g13790 pycom14g13800
rosa_chinensis RchiOBHm_Chr5g0019351 RchiOBHm_Chr5g0022771 RchiOBHm_Chr7g0191441 RchiOBHm_Chr7g0191531
rosa_laevigata RLG00000004449 RLG00000032440
rosa_multiflora Rmu_sc0001809.1_g000062 Rmu_sc0005292.1_g000027
rosa_roxburghii Rroxscaffold_1G00074260 Rroxscaffold_6G00390280 Rroxscaffold_7G00168660
rosa_rugosa Rorug05G0049600 Rorug05G0049700 Rorug05G0049800 Rorug06G0510400
rosa_samantha Rh5CG151400 Rh5DG140300 Rh7AG118400 Rh7BG120400 Rh7CG123200 Rh7DG121300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1170
Acc36I ACCTGC 2 cut(s) 870, 958
AccB1I GGYRCC 1 cut(s) 1090
AccB7I CCANNNNNTGG 1 cut(s) 151
AccII CGCG 1 cut(s) 185
AciI CCGC 9 cut(s) 135, 138, 185, 188, 302, 320, 326, 368, 1016
AclWI GGATC 8 cut(s) 203, 243, 582, 595, 877, 890, 922, 976
AcsI RAATTY 1 cut(s) 1202
AcuI CTGAAG 2 cut(s) 558, 564
AdeI CACNNNGTG 1 cut(s) 1331
AfiI CCNNNNNNNGG 6 cut(s) 49, 111, 151, 568, 929, 1049
AflII CTTAAG 1 cut(s) 706
AgsI TTSAA 1 cut(s) 1006
AhdI GACNNNNNGTC 1 cut(s) 112
AjnI CCWGG 3 cut(s) 630, 712, 1216
AluBI AGCT 5 cut(s) 7, 94, 151, 542, 737
AluI AGCT 5 cut(s) 7, 94, 151, 542, 737
Alw21I GWGCWC 1 cut(s) 9
Alw26I GTCTC 5 cut(s) 120, 276, 427, 1004, 1345
AlwI GGATC 8 cut(s) 203, 243, 582, 595, 877, 890, 922, 976
AlwNI CAGNNNCTG 1 cut(s) 151
AoxI GGCC 3 cut(s) 533, 710, 1339
ApeKI GCWGC 6 cut(s) 66, 69, 148, 221, 323, 905
ApoI RAATTY 1 cut(s) 1202
ArsI GACNNNNNNTTYG 2 cut(s) 795, 827
AspS9I GGNCC 4 cut(s) 203, 947, 1152, 1339
AsuHPI GGTGA 5 cut(s) 152, 191, 599, 661, 881
AvaII GGWCC 3 cut(s) 203, 947, 1152
BaeI ACNNNNGTAYC 2 cut(s) 1293, 1326
BamHI GGATCC 1 cut(s) 587
BanI GGYRCC 1 cut(s) 1090
BanII GRGCYC 1 cut(s) 9
BbsI GAAGAC 1 cut(s) 552
Bbv12I GWGCWC 1 cut(s) 9
BbvI GCAGC 6 cut(s) 78, 81, 160, 208, 335, 892
BccI CCATC 2 cut(s) 934, 1051
BcgI CGANNNNNNTGC 4 cut(s) 61, 95, 203, 237
BciT130I CCWGG 3 cut(s) 632, 714, 1218
BciVI GTATCC 2 cut(s) 534, 1321
BcoDI GTCTC 5 cut(s) 120, 276, 427, 1004, 1345
BfaI CTAG 1 cut(s) 1103
BfmI CTRYAG 3 cut(s) 877, 906, 1305
BfrI CTTAAG 1 cut(s) 706
BfuAI ACCTGC 2 cut(s) 870, 958
BfuI GTATCC 2 cut(s) 534, 1321
BisI GCNGC 9 cut(s) 67, 70, 138, 149, 186, 222, 321, 324, 906
BlsI GCNGC 9 cut(s) 68, 71, 139, 150, 187, 223, 322, 325, 907
Bme1390I CCNGG 3 cut(s) 632, 714, 1218
Bme18I GGWCC 3 cut(s) 203, 947, 1152
BmeRI GACNNNNNGTC 1 cut(s) 112
BmgT120I GGNCC 4 cut(s) 203, 947, 1152, 1339
BmiI GGNNCC 6 cut(s) 205, 589, 856, 1056, 1092, 1153
BmrFI CCNGG 3 cut(s) 632, 714, 1218
BmsI GCATC 3 cut(s) 280, 962, 1026
BpiI GAAGAC 1 cut(s) 552
BpmI CTGGAG 1 cut(s) 762
BpuEI CTTGAG 2 cut(s) 548, 1032
Bsa29I ATCGAT 1 cut(s) 81
BsaI GGTCTC 2 cut(s) 120, 1345
BsaJI CCNNGG 3 cut(s) 631, 713, 751
BsaWI WCCGGW 2 cut(s) 173, 200
BsaXI ACNNNNNCTCC 6 cut(s) 155, 185, 345, 375, 815, 845
Bsc4I CCNNNNNNNGG 6 cut(s) 49, 111, 151, 568, 929, 1049
Bse1I ACTGG 3 cut(s) 527, 779, 1094
Bse3DI GCAATG 1 cut(s) 463
BseBI CCWGG 3 cut(s) 632, 714, 1218
BseCI ATCGAT 1 cut(s) 81
BseDI CCNNGG 3 cut(s) 631, 713, 751
BseGI GGATG 2 cut(s) 725, 1288
BseLI CCNNNNNNNGG 6 cut(s) 49, 111, 151, 568, 929, 1049
BseMI GCAATG 1 cut(s) 463
BseMII CTCAG 2 cut(s) 1161, 1319
BseNI ACTGG 3 cut(s) 527, 779, 1094
BseRI GAGGAG 8 cut(s) 13, 16, 19, 22, 294, 350, 369, 386
BseXI GCAGC 6 cut(s) 78, 81, 160, 208, 335, 892
BsgI GTGCAG 3 cut(s) 975, 1104, 1252
Bsh1236I CGCG 1 cut(s) 185
BshFI GGCC 3 cut(s) 535, 712, 1341
BshNI GGYRCC 1 cut(s) 1090
BshVI ATCGAT 1 cut(s) 81
BsiHKAI GWGCWC 1 cut(s) 9
BsiSI CCGG 2 cut(s) 174, 201
BslFI GGGAC 5 cut(s) 189, 816, 819, 1165, 1268
BslI CCNNNNNNNGG 6 cut(s) 49, 111, 151, 568, 929, 1049
BsmAI GTCTC 5 cut(s) 120, 276, 427, 1004, 1345
BsmBI CGTCTC 1 cut(s) 276
BsmFI GGGAC 5 cut(s) 189, 816, 819, 1165, 1268
BsmI GAATGC 1 cut(s) 698
BsnI GGCC 3 cut(s) 535, 712, 1341
Bso31I GGTCTC 2 cut(s) 120, 1345
Bsp1286I GDGCHC 1 cut(s) 9
Bsp143I GATC 9 cut(s) 82, 208, 235, 587, 869, 895, 914, 968, 998
Bsp19I CCATGG 1 cut(s) 751
BspACI CCGC 9 cut(s) 135, 138, 185, 188, 302, 320, 326, 368, 1016
BspANI GGCC 3 cut(s) 535, 712, 1341
BspCNI CTCAG 2 cut(s) 1160, 1320
BspDI ATCGAT 1 cut(s) 81
BspFNI CGCG 1 cut(s) 185
BspLI GGNNCC 6 cut(s) 205, 589, 856, 1056, 1092, 1153
BspMAI CTGCAG 3 cut(s) 881, 910, 1309
BspMI ACCTGC 2 cut(s) 870, 958
BspPI GGATC 8 cut(s) 203, 243, 582, 595, 877, 890, 922, 976
BspT107I GGYRCC 1 cut(s) 1090
BspTI CTTAAG 1 cut(s) 706
BspTNI GGTCTC 2 cut(s) 120, 1345
BsrDI GCAATG 1 cut(s) 463
BsrI ACTGG 3 cut(s) 527, 779, 1094
BssECI CCNNGG 3 cut(s) 631, 713, 751
BssMI GATC 9 cut(s) 82, 208, 235, 587, 869, 895, 914, 968, 998
BssT1I CCWWGG 1 cut(s) 751
Bst2UI CCWGG 3 cut(s) 632, 714, 1218
Bst4CI ACNGT 4 cut(s) 123, 551, 1185, 1259
Bst6I CTCTTC 2 cut(s) 371, 444
BstAFI CTTAAG 1 cut(s) 706
BstC8I GCNNGC 4 cut(s) 739, 1115, 1119, 1343
BstDEI CTNAG 2 cut(s) 1147, 1328
BstDSI CCRYGG 1 cut(s) 751
BstF5I GGATG 2 cut(s) 725, 1288
BstFNI CGCG 1 cut(s) 185
BstKTI GATC 9 cut(s) 85, 211, 238, 590, 872, 898, 917, 971, 1001
BstMAI GTCTC 5 cut(s) 120, 276, 427, 1004, 1345
BstMBI GATC 9 cut(s) 82, 208, 235, 587, 869, 895, 914, 968, 998
BstMWI GCNNNNNNNGC 2 cut(s) 299, 1024
BstNI CCWGG 3 cut(s) 632, 714, 1218
BstNSI RCATGY 1 cut(s) 1117
BstSCI CCNGG 3 cut(s) 630, 712, 1216
BstSFI CTRYAG 3 cut(s) 877, 906, 1305
BstUI CGCG 1 cut(s) 185
BstV1I GCAGC 6 cut(s) 78, 81, 160, 208, 335, 892
BstV2I GAAGAC 1 cut(s) 552
BstX2I RGATCY 2 cut(s) 587, 914
BstYI RGATCY 2 cut(s) 587, 914
Bsu15I ATCGAT 1 cut(s) 81
BsuI GTATCC 2 cut(s) 534, 1321
BsuRI GGCC 3 cut(s) 535, 712, 1341
BsuTUI ATCGAT 1 cut(s) 81
BtgI CCRYGG 1 cut(s) 751
BtsCI GGATG 2 cut(s) 725, 1288
BtsIMutI CAGTG 2 cut(s) 534, 1325
BveI ACCTGC 2 cut(s) 870, 958
Cac8I GCNNGC 4 cut(s) 739, 1115, 1119, 1343
CaiI CAGNNNCTG 1 cut(s) 151
Cfr13I GGNCC 4 cut(s) 203, 947, 1152, 1339
ClaI ATCGAT 1 cut(s) 81
CseI GACGC 1 cut(s) 191
CviAII CATG 3 cut(s) 752, 1114, 1356
DdeI CTNAG 2 cut(s) 1147, 1328
DpnI GATC 9 cut(s) 84, 210, 237, 589, 871, 897, 916, 970, 1000
DpnII GATC 9 cut(s) 82, 208, 235, 587, 869, 895, 914, 968, 998
DraI TTTAAA 2 cut(s) 640, 1267
DraIII CACNNNGTG 1 cut(s) 1331
DriI GACNNNNNGTC 1 cut(s) 112
Eam1104I CTCTTC 2 cut(s) 371, 444
Eam1105I GACNNNNNGTC 1 cut(s) 112
EarI CTCTTC 2 cut(s) 371, 444
EciI GGCGGA 1 cut(s) 383
Ecl136II GAGCTC 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 751
Eco147I AGGCCT 1 cut(s) 535
Eco24I GRGCYC 1 cut(s) 9
Eco31I GGTCTC 2 cut(s) 120, 1345
Eco47I GGWCC 3 cut(s) 203, 947, 1152
Eco53kI GAGCTC 1 cut(s) 7
Eco57I CTGAAG 2 cut(s) 558, 564
EcoICRI GAGCTC 1 cut(s) 7
EcoO109I RGGNCCY 1 cut(s) 1339
EcoRI GAATTC 1 cut(s) 1202
EcoRII CCWGG 3 cut(s) 630, 712, 1216
EcoT14I CCWWGG 1 cut(s) 751
EcoT38I GRGCYC 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 751
Esp3I CGTCTC 1 cut(s) 276
FaeI CATG 3 cut(s) 755, 1117, 1359
FalI AAGNNNNNCTT 2 cut(s) 689, 721
FaqI GGGAC 5 cut(s) 189, 816, 819, 1165, 1268
FatI CATG 3 cut(s) 751, 1113, 1355
FauNDI CATATG 1 cut(s) 1132
Fnu4HI GCNGC 9 cut(s) 67, 70, 138, 149, 186, 222, 321, 324, 906
FokI GGATG 2 cut(s) 732, 1275
FriOI GRGCYC 1 cut(s) 9
Fsp4HI GCNGC 9 cut(s) 67, 70, 138, 149, 186, 222, 321, 324, 906
FspBI CTAG 1 cut(s) 1103
GluI GCNGC 9 cut(s) 67, 70, 138, 149, 186, 222, 321, 324, 906
GsuI CTGGAG 1 cut(s) 762
HaeIII GGCC 3 cut(s) 535, 712, 1341
HapII CCGG 2 cut(s) 174, 201
HgaI GACGC 1 cut(s) 191
Hin1II CATG 3 cut(s) 755, 1117, 1359
HindIII AAGCTT 1 cut(s) 735
HinfI GANTC 3 cut(s) 14, 170, 1012
HpaII CCGG 2 cut(s) 174, 201
HphI GGTGA 5 cut(s) 152, 191, 599, 661, 881
Hpy166II GTNNAC 2 cut(s) 126, 947
Hpy188I TCNGA 6 cut(s) 13, 106, 169, 673, 919, 1302
Hpy188III TCNNGA 6 cut(s) 50, 206, 212, 565, 930, 1103
Hpy8I GTNNAC 2 cut(s) 126, 947
Hpy99I CGWCG 2 cut(s) 251, 290
HpyAV CCTTC 7 cut(s) 344, 455, 487, 507, 612, 646, 1068
HpyCH4III ACNGT 4 cut(s) 123, 551, 1185, 1259
HpyF10VI GCNNNNNNNGC 2 cut(s) 299, 1024
HpyF3I CTNAG 2 cut(s) 1147, 1328
Hsp92II CATG 3 cut(s) 755, 1117, 1359
Kzo9I GATC 9 cut(s) 82, 208, 235, 587, 869, 895, 914, 968, 998
LmnI GCTCC 3 cut(s) 4, 781, 860
Lsp1109I GCAGC 6 cut(s) 78, 81, 160, 208, 335, 892
LweI GCATC 3 cut(s) 280, 962, 1026
MaeI CTAG 1 cut(s) 1103
MaeIII GTNAC 2 cut(s) 179, 1331
MalI GATC 9 cut(s) 84, 210, 237, 589, 871, 897, 916, 970, 1000
MboI GATC 9 cut(s) 82, 208, 235, 587, 869, 895, 914, 968, 998
MboII GAAGA 6 cut(s) 352, 388, 458, 461, 502, 557
MflI RGATCY 2 cut(s) 587, 914
MhlI GDGCHC 1 cut(s) 9
MluCI AATT 4 cut(s) 574, 810, 974, 1202
MlyI GAGTC 2 cut(s) 164, 1006
MmeI TCCRAC 3 cut(s) 129, 192, 615
MseI TTAA 7 cut(s) 603, 639, 707, 792, 885, 1244, 1266
MspA1I CMGCKG 2 cut(s) 151, 326
MspCI CTTAAG 1 cut(s) 706
MspI CCGG 2 cut(s) 174, 201
MspR9I CCNGG 3 cut(s) 632, 714, 1218
Mva1269I GAATGC 1 cut(s) 698
MvaI CCWGG 3 cut(s) 632, 714, 1218
MvnI CGCG 1 cut(s) 185
MwoI GCNNNNNNNGC 2 cut(s) 299, 1024
NcoI CCATGG 1 cut(s) 751
NdeI CATATG 1 cut(s) 1132
NdeII GATC 9 cut(s) 82, 208, 235, 587, 869, 895, 914, 968, 998
NlaIII CATG 3 cut(s) 755, 1117, 1359
NlaIV GGNNCC 6 cut(s) 205, 589, 856, 1056, 1092, 1153
NmuCI GTSAC 2 cut(s) 179, 1331
NspI RCATGY 1 cut(s) 1117
PaeI GCATGC 1 cut(s) 1117
PceI AGGCCT 1 cut(s) 535
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PctI GAATGC 1 cut(s) 698
PfeI GAWTC 1 cut(s) 14
PflMI CCANNNNNTGG 1 cut(s) 151
PkrI GCNGC 9 cut(s) 68, 71, 139, 150, 187, 223, 322, 325, 907
PleI GAGTC 2 cut(s) 164, 1006
PpsI GAGTC 2 cut(s) 164, 1006
PsiI TTATAA 1 cut(s) 1170
Psp124BI GAGCTC 1 cut(s) 9
Psp6I CCWGG 3 cut(s) 630, 712, 1216
PspGI CCWGG 3 cut(s) 630, 712, 1216
PspN4I GGNNCC 6 cut(s) 205, 589, 856, 1056, 1092, 1153
PspPI GGNCC 4 cut(s) 203, 947, 1152, 1339
PstI CTGCAG 3 cut(s) 881, 910, 1309
PstNI CAGNNNCTG 1 cut(s) 151
PsuI RGATCY 2 cut(s) 587, 914
PvuII CAGCTG 1 cut(s) 151
SacI GAGCTC 1 cut(s) 9
SaqAI TTAA 7 cut(s) 603, 639, 707, 792, 885, 1244, 1266
SatI GCNGC 9 cut(s) 67, 70, 138, 149, 186, 222, 321, 324, 906
Sau3AI GATC 9 cut(s) 82, 208, 235, 587, 869, 895, 914, 968, 998
Sau96I GGNCC 4 cut(s) 203, 947, 1152, 1339
SchI GAGTC 2 cut(s) 164, 1006
ScrFI CCNGG 3 cut(s) 632, 714, 1218
SduI GDGCHC 1 cut(s) 9
SfaNI GCATC 3 cut(s) 280, 962, 1026
SfcI CTRYAG 3 cut(s) 877, 906, 1305
SinI GGWCC 3 cut(s) 203, 947, 1152
SmlI CTYRAG 3 cut(s) 563, 706, 1047
SmoI CTYRAG 3 cut(s) 563, 706, 1047
SphI GCATGC 1 cut(s) 1117
Sse9I AATT 4 cut(s) 574, 810, 974, 1202
SseBI AGGCCT 1 cut(s) 535
SsiI CCGC 9 cut(s) 135, 138, 185, 188, 302, 320, 326, 368, 1016
SspMI CTAG 1 cut(s) 1103
SstI GAGCTC 1 cut(s) 9
StuI AGGCCT 1 cut(s) 535
StyD4I CCNGG 3 cut(s) 630, 712, 1216
StyI CCWWGG 1 cut(s) 751
TaaI ACNGT 4 cut(s) 123, 551, 1185, 1259
TaqI TCGA 3 cut(s) 81, 411, 814
TaqII GACCGA 1 cut(s) 1169
TasI AATT 4 cut(s) 574, 810, 974, 1202
TauI GCSGC 3 cut(s) 140, 188, 323
TfiI GAWTC 1 cut(s) 14
Tru1I TTAA 7 cut(s) 603, 639, 707, 792, 885, 1244, 1266
Tru9I TTAA 7 cut(s) 603, 639, 707, 792, 885, 1244, 1266
TscAI CASTG 2 cut(s) 534, 1332
TseFI GTSAC 2 cut(s) 179, 1331
TseI GCWGC 6 cut(s) 66, 69, 148, 221, 323, 905
Tsp45I GTSAC 2 cut(s) 179, 1331
TspDTI ATGAA 3 cut(s) 438, 474, 1215
TspGWI ACGGA 1 cut(s) 432
TspRI CASTG 2 cut(s) 534, 1332
Van91I CCANNNNNTGG 1 cut(s) 151
Vha464I CTTAAG 1 cut(s) 706
VpaK11BI GGWCC 3 cut(s) 203, 947, 1152
XapI RAATTY 1 cut(s) 1202
XbaI TCTAGA 1 cut(s) 1102
XceI RCATGY 1 cut(s) 1117
XspI CTAG 1 cut(s) 1103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.