MD17G1218300.v1.1

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000833
Physical Location & Seq
Reverse (-)
26552334 .. 26554016
1683 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1218300.v1.1.491

Sequence Viewer

Length: 1683 bp
ATGTCTTCTCTCCAACAAACTTTCTCTTCCAAATCTAGTTCGGACTTCAACGAGTTCCAATGGGTTATTCAAATCCGAAAAACACTCGAGGAAGAGCTCGACGATGATGGCGAAATCCCGGTTTCGGTTTTCAATGTCCCGAAAACCCTTTTGGCCAGTGATCCTCATTCCTACACCCCACAAGAAGTTGCAATTGGTCCTTACCATTATTTGCGTACGGAGCTCTACGAGATGGAGAGGTACAAAGTGGCTGCAGCTAAACGAACACAAAAGAATCTCCAGTGCCTTAAGTTCCAAAATGTTGTTGACCAATTGATAAAGTTTGAGCCGTGGATTCGTGCTTGCTACCACAAGTACCTGGATTTCAATGGTGAGACTCTAGGGTGGATGATGGCGATTGATGCATCGTTCGTGCTAGAAATGCTCCAAGTCTATGGAGCCAAAGAAGGGAAGATTTTGACAAGAGTTTCCTCAAAGATGTCGCGCTTGGTTGACTATTCAGGCAGGAACTCAGCACACCATGCAATTCTAAGGGACTTGGTAATGCTCGAGAACCAAATCCCACTATTTGTGTCGAGAAAAATGTTGGAGTTTCAATTCCCATCGTTGGAAACCGCCGACGAGATGCTGCTTTCGATGTTGATGGGATTGTGCAAAGAGCTTTCACCCTTCAAGATGAAGGATGACGACCTGCCGAAGATCAAAGTATCAGAATGTGCTCACTTGCTAGACTTTTTGTACCAAATGATCACCCCCAAACTAGAACGCCGGCCTTCTGAAATTGTAGAAGCTGAGGATCAAGGTGAAGCCGCAGACGAAGACAAGGAGTCAAAATCTACGAAGAGCCCGAATTACGTTAAACAATTTCTTAAGGAAGTATGGAAGCTGCTGTGGAAACTAAACAAAGGGCCGGTACGTCTCCTTAAAAAAATATTTGTATCCCGACCTATTAAAGTGATATTTAAATTGCCTTGGACAATCCTCTCCAGCCTTCCTGGATTTGCACTTTTGAAACAACCTTCTGCTTATTTATTCTCCTCCCAAGACAAAGAAGAAATCAAACCCGAAAATGAGAGTTCCGTCAACATACCGCCATTGGTAGAGGAGATTACAATCCCTTCTGTGTCTTGTCTTATGGAATCTGGGGTCCGTTTCGTGCCAACAAAGGGTAGCATTTCATCCATCTCCTTTGATCCTAAAACGGTCACACTTTACCTCCCCGTAACTAGCTTAGATGTGAACGCAGAGGTGATCCTGAGAAACTTAGTAGCTTATGAAGCATCAAATGCATCAGGGCAGTTGGTTTTTACGCGCTACACGGAAATGATGAACGGGATTATAGACACGGAGGAGGACGCAAAGCTGCTTAGAGATAAAGGTATAATTCTGAACCGTTTGAAGAGTGATGAAGAAGTGGCCAATCTGTTTAGTGGTATGAGCAAGTCGATTCGGTTGACGAAAGTGCCATTCTTGGACCAGGCGATTGACGATGTGAACAAGTATTACAACGGTAGATGGAAGGTTAAAATGGCAAAAATGTTCAAGGTTTATGTGGTTGGTTGCTGGCCAATTCTTTCTTTGTTGGCTGCCGTTTTTCTCTTGCTATTGATGACATTGCAAGCGGTTTGCTCAGTTTATAGCTGCGGTCGCACATTTGGCATCAACACAACCACTACTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

561

Amino Acids

63.83

Weight (kDa)

6.65

Isoelectric Point (pI)

45.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 43 - 536 3.6e-100 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 699
AccII CGCG 2 cut(s) 484, 1312
AciI CCGC 5 cut(s) 615, 810, 1091, 1622, 1644
AclWI GGATC 4 cut(s) 155, 804, 1187, 1246
AcoI YGGCCR 3 cut(s) 153, 1416, 1565
AfaI GTAC 5 cut(s) 217, 242, 356, 740, 915
AfiI CCNNNNNNNGG 4 cut(s) 124, 447, 607, 1166
AflII CTTAAG 2 cut(s) 287, 869
AgsI TTSAA 9 cut(s) 49, 71, 133, 367, 596, 673, 1012, 1399, 1543
AhdI GACNNNNNGTC 1 cut(s) 826
AjnI CCWGG 3 cut(s) 357, 994, 1476
AjuI GAANNNNNNNTTGG 6 cut(s) 51, 83, 134, 166, 177, 209
Alw21I GWGCWC 3 cut(s) 99, 225, 721
Alw26I GTCTC 2 cut(s) 368, 923
AlwI GGATC 4 cut(s) 155, 804, 1187, 1246
Ama87I CYCGRG 2 cut(s) 86, 548
AoxI GGCC 5 cut(s) 153, 770, 908, 1416, 1565
ApeKI GCWGC 7 cut(s) 251, 254, 628, 886, 1363, 1586, 1641
AspLEI GCGC 2 cut(s) 486, 1314
AspS9I GGNCC 4 cut(s) 197, 908, 1147, 1474
AsuC2I CCSGG 1 cut(s) 119
AsuHPI GGTGA 5 cut(s) 383, 657, 742, 815, 1261
AvaI CYCGRG 2 cut(s) 86, 548
AvaII GGWCC 3 cut(s) 197, 1147, 1474
BalI TGGCCA 3 cut(s) 155, 1418, 1567
BanII GRGCYC 3 cut(s) 99, 225, 848
BbsI GAAGAC 1 cut(s) 825
Bbv12I GWGCWC 3 cut(s) 99, 225, 721
BbvCI CCTCAGC 1 cut(s) 792
BbvI GCAGC 7 cut(s) 238, 266, 615, 873, 1350, 1573, 1628
BccI CCATC 7 cut(s) 101, 226, 385, 610, 637, 1190, 1509
BceAI ACGGC 2 cut(s) 313, 1574
BciT130I CCWGG 3 cut(s) 359, 996, 1478
BciVI GTATCC 1 cut(s) 949
BclI TGATCA 1 cut(s) 747
BcnI CCSGG 1 cut(s) 119
BcoDI GTCTC 2 cut(s) 368, 923
BfaI CTAG 6 cut(s) 36, 380, 416, 728, 761, 1227
BfmI CTRYAG 1 cut(s) 252
BfrI CTTAAG 2 cut(s) 287, 869
BfuAI ACCTGC 1 cut(s) 699
BfuI GTATCC 1 cut(s) 949
BisI GCNGC 8 cut(s) 252, 255, 629, 810, 887, 1364, 1587, 1642
BlsI GCNGC 8 cut(s) 253, 256, 630, 811, 888, 1365, 1588, 1643
Bme1390I CCNGG 4 cut(s) 119, 359, 996, 1478
Bme18I GGWCC 3 cut(s) 197, 1147, 1474
BmeRI GACNNNNNGTC 1 cut(s) 826
BmeT110I CYCGRG 2 cut(s) 86, 548
BmgT120I GGNCC 4 cut(s) 197, 908, 1147, 1474
BmiI GGNNCC 2 cut(s) 439, 1148
BmrFI CCNGG 4 cut(s) 119, 359, 996, 1478
BmsI GCATC 6 cut(s) 391, 413, 615, 1289, 1298, 1668
BpiI GAAGAC 1 cut(s) 825
BpmI CTGGAG 2 cut(s) 263, 970
Bpu10I CCTNAGC 1 cut(s) 792
BpuMI CCSGG 1 cut(s) 119
BsaBI GATNNNNATC 1 cut(s) 1112
BsaJI CCNNGG 2 cut(s) 329, 971
BsaXI ACNNNNNCTCC 2 cut(s) 1200, 1230
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 447, 607, 1166
Bse118I RCCGGY 2 cut(s) 768, 910
Bse1I ACTGG 2 cut(s) 156, 280
Bse3DI GCAATG 1 cut(s) 1613
Bse8I GATNNNNATC 1 cut(s) 1112
BseBI CCWGG 3 cut(s) 359, 996, 1478
BseDI CCNNGG 2 cut(s) 329, 971
BseGI GGATG 3 cut(s) 393, 688, 1178
BseJI GATNNNNATC 1 cut(s) 1112
BseLI CCNNNNNNNGG 4 cut(s) 124, 447, 607, 1166
BseMI GCAATG 1 cut(s) 1613
BseMII CTCAG 4 cut(s) 525, 783, 1247, 1644
BseNI ACTGG 2 cut(s) 156, 280
BseRI GAGGAG 3 cut(s) 1027, 1118, 1364
BseXI GCAGC 7 cut(s) 238, 266, 615, 873, 1350, 1573, 1628
Bsh1236I CGCG 2 cut(s) 484, 1312
Bsh1285I CGRYCG 1 cut(s) 1648
BshFI GGCC 5 cut(s) 155, 772, 910, 1418, 1567
BsiEI CGRYCG 1 cut(s) 1648
BsiHKAI GWGCWC 3 cut(s) 99, 225, 721
BsiHKCI CYCGRG 2 cut(s) 86, 548
BsiSI CCGG 3 cut(s) 119, 769, 911
BsiWI CGTACG 1 cut(s) 215
BslFI GGGAC 2 cut(s) 122, 548
BslI CCNNNNNNNGG 4 cut(s) 124, 447, 607, 1166
BsmAI GTCTC 2 cut(s) 368, 923
BsmBI CGTCTC 1 cut(s) 923
BsmFI GGGAC 2 cut(s) 122, 548
BsnI GGCC 5 cut(s) 155, 772, 910, 1418, 1567
BsoBI CYCGRG 2 cut(s) 86, 548
Bsp1286I GDGCHC 4 cut(s) 99, 225, 721, 848
Bsp143I GATC 6 cut(s) 160, 699, 747, 796, 1192, 1251
BspACI CCGC 5 cut(s) 615, 810, 1091, 1622, 1644
BspANI GGCC 5 cut(s) 155, 772, 910, 1418, 1567
BspCNI CTCAG 4 cut(s) 524, 784, 1248, 1643
BspFNI CGCG 2 cut(s) 484, 1312
BspLI GGNNCC 2 cut(s) 439, 1148
BspMAI CTGCAG 1 cut(s) 256
BspMI ACCTGC 1 cut(s) 699
BspPI GGATC 4 cut(s) 155, 804, 1187, 1246
BspQI GCTCTTC 2 cut(s) 87, 836
BspTI CTTAAG 2 cut(s) 287, 869
BsrDI GCAATG 1 cut(s) 1613
BsrFI RCCGGY 2 cut(s) 768, 910
BsrI ACTGG 2 cut(s) 156, 280
BssAI RCCGGY 2 cut(s) 768, 910
BssECI CCNNGG 2 cut(s) 329, 971
BssMI GATC 6 cut(s) 160, 699, 747, 796, 1192, 1251
BssT1I CCWWGG 1 cut(s) 971
Bst2UI CCWGG 3 cut(s) 359, 996, 1478
Bst4CI ACNGT 3 cut(s) 1204, 1394, 1511
Bst6I CTCTTC 4 cut(s) 31, 87, 836, 1394
BstAFI CTTAAG 2 cut(s) 287, 869
BstAPI GCANNNNNTGC 2 cut(s) 521, 1286
BstC8I GCNNGC 4 cut(s) 343, 770, 1565, 1620
BstDEI CTNAG 9 cut(s) 511, 530, 792, 1231, 1256, 1264, 1367, 1630, 1680
BstDSI CCRYGG 1 cut(s) 329
BstF5I GGATG 3 cut(s) 393, 688, 1178
BstFNI CGCG 2 cut(s) 484, 1312
BstHHI GCGC 2 cut(s) 486, 1314
BstKTI GATC 6 cut(s) 163, 702, 750, 799, 1195, 1254
BstMAI GTCTC 2 cut(s) 368, 923
BstMBI GATC 6 cut(s) 160, 699, 747, 796, 1192, 1251
BstMCI CGRYCG 1 cut(s) 1648
BstMWI GCNNNNNNNGC 8 cut(s) 220, 401, 421, 521, 1277, 1286, 1647, 1656
BstNI CCWGG 3 cut(s) 359, 996, 1478
BstSCI CCNGG 4 cut(s) 117, 357, 994, 1476
BstSFI CTRYAG 1 cut(s) 252
BstUI CGCG 2 cut(s) 484, 1312
BstV1I GCAGC 7 cut(s) 238, 266, 615, 873, 1350, 1573, 1628
BstV2I GAAGAC 1 cut(s) 825
BstXI CCANNNNNNTGG 1 cut(s) 434
BsuI GTATCC 1 cut(s) 949
BsuRI GGCC 5 cut(s) 155, 772, 910, 1418, 1567
BtgI CCRYGG 1 cut(s) 329
BtsCI GGATG 3 cut(s) 393, 688, 1178
BtsIMutI CAGTG 2 cut(s) 163, 287
BveI ACCTGC 1 cut(s) 699
Cac8I GCNNGC 4 cut(s) 343, 770, 1565, 1620
CfoI GCGC 2 cut(s) 486, 1314
Cfr10I RCCGGY 2 cut(s) 768, 910
Cfr13I GGNCC 4 cut(s) 197, 908, 1147, 1474
CseI GACGC 1 cut(s) 1364
Csp6I GTAC 5 cut(s) 216, 241, 355, 739, 914
CviAII CATG 1 cut(s) 521
CviQI GTAC 5 cut(s) 216, 241, 355, 739, 914
DdeI CTNAG 9 cut(s) 511, 530, 792, 1231, 1256, 1264, 1367, 1630, 1680
DpnI GATC 6 cut(s) 162, 701, 749, 798, 1194, 1253
DpnII GATC 6 cut(s) 160, 699, 747, 796, 1192, 1251
DraI TTTAAA 1 cut(s) 964
DriI GACNNNNNGTC 1 cut(s) 826
EaeI YGGCCR 3 cut(s) 153, 1416, 1565
Eam1104I CTCTTC 4 cut(s) 31, 87, 836, 1394
Eam1105I GACNNNNNGTC 1 cut(s) 826
EarI CTCTTC 4 cut(s) 31, 87, 836, 1394
Ecl136II GAGCTC 2 cut(s) 97, 223
Eco130I CCWWGG 1 cut(s) 971
Eco24I GRGCYC 3 cut(s) 99, 225, 848
Eco47I GGWCC 3 cut(s) 197, 1147, 1474
Eco53kI GAGCTC 2 cut(s) 97, 223
Eco88I CYCGRG 2 cut(s) 86, 548
EcoICRI GAGCTC 2 cut(s) 97, 223
EcoRII CCWGG 3 cut(s) 357, 994, 1476
EcoT14I CCWWGG 1 cut(s) 971
EcoT22I ATGCAT 2 cut(s) 406, 1291
EcoT38I GRGCYC 3 cut(s) 99, 225, 848
ErhI CCWWGG 1 cut(s) 971
Esp3I CGTCTC 1 cut(s) 923
FaeI CATG 1 cut(s) 524
FaqI GGGAC 2 cut(s) 122, 548
FatI CATG 1 cut(s) 520
FbaI TGATCA 1 cut(s) 747
Fnu4HI GCNGC 8 cut(s) 252, 255, 629, 810, 887, 1364, 1587, 1642
FokI GGATG 3 cut(s) 400, 695, 1165
FriOI GRGCYC 3 cut(s) 99, 225, 848
Fsp4HI GCNGC 8 cut(s) 252, 255, 629, 810, 887, 1364, 1587, 1642
FspBI CTAG 6 cut(s) 36, 380, 416, 728, 761, 1227
GlaI GCGC 2 cut(s) 485, 1313
GluI GCNGC 8 cut(s) 252, 255, 629, 810, 887, 1364, 1587, 1642
GsuI CTGGAG 2 cut(s) 263, 970
HaeIII GGCC 5 cut(s) 155, 772, 910, 1418, 1567
HapII CCGG 3 cut(s) 119, 769, 911
HgaI GACGC 1 cut(s) 1364
HhaI GCGC 2 cut(s) 486, 1314
Hin1II CATG 1 cut(s) 524
Hin6I GCGC 2 cut(s) 484, 1312
HinP1I GCGC 2 cut(s) 484, 1312
HincII GTYRAC 4 cut(s) 307, 493, 1084, 1455
HindII GTYRAC 4 cut(s) 307, 493, 1084, 1455
HinfI GANTC 6 cut(s) 274, 334, 376, 827, 1139, 1447
HpaII CCGG 3 cut(s) 119, 769, 911
HphI GGTGA 5 cut(s) 383, 657, 742, 815, 1261
Hpy166II GTNNAC 6 cut(s) 307, 493, 1084, 1240, 1455, 1495
Hpy188I TCNGA 5 cut(s) 43, 77, 712, 778, 1389
Hpy188III TCNNGA 6 cut(s) 139, 550, 576, 673, 942, 1255
Hpy8I GTNNAC 6 cut(s) 307, 493, 1084, 1240, 1455, 1495
Hpy99I CGWCG 2 cut(s) 104, 623
HpyAV CCTTC 8 cut(s) 440, 673, 679, 783, 1001, 1029, 1128, 1513
HpyCH4III ACNGT 3 cut(s) 1204, 1394, 1511
HpyCH4IV ACGT 2 cut(s) 855, 916
HpyCH4V TGCA 8 cut(s) 191, 254, 404, 524, 654, 1004, 1289, 1618
HpyF10VI GCNNNNNNNGC 8 cut(s) 220, 401, 421, 521, 1277, 1286, 1647, 1656
HpyF3I CTNAG 9 cut(s) 511, 530, 792, 1231, 1256, 1264, 1367, 1630, 1680
HpySE526I ACGT 2 cut(s) 855, 916
Hsp92II CATG 1 cut(s) 524
HspAI GCGC 2 cut(s) 484, 1312
KroI GCCGGC 1 cut(s) 768
KroNI GCCGGC 1 cut(s) 770
Ksp22I TGATCA 1 cut(s) 747
Kzo9I GATC 6 cut(s) 160, 699, 747, 796, 1192, 1251
LguI GCTCTTC 2 cut(s) 87, 836
LmnI GCTCC 3 cut(s) 220, 429, 437
Lsp1109I GCAGC 7 cut(s) 238, 266, 615, 873, 1350, 1573, 1628
LweI GCATC 6 cut(s) 391, 413, 615, 1289, 1298, 1668
MaeI CTAG 6 cut(s) 36, 380, 416, 728, 761, 1227
MaeII ACGT 2 cut(s) 855, 916
MaeIII GTNAC 2 cut(s) 1204, 1222
MalI GATC 6 cut(s) 162, 701, 749, 798, 1194, 1253
MboI GATC 6 cut(s) 160, 699, 747, 796, 1192, 1251
MboII GAAGA 9 cut(s) 18, 104, 463, 709, 830, 853, 1064, 1411, 1421
MfeI CAATTG 2 cut(s) 192, 311
MhlI GDGCHC 4 cut(s) 99, 225, 721, 848
MlsI TGGCCA 3 cut(s) 155, 1418, 1567
MluNI TGGCCA 3 cut(s) 155, 1418, 1567
MlyI GAGTC 2 cut(s) 370, 836
MmeI TCCRAC 3 cut(s) 37, 567, 588
Mox20I TGGCCA 3 cut(s) 155, 1418, 1567
Mph1103I ATGCAT 2 cut(s) 406, 1291
MroNI GCCGGC 1 cut(s) 768
MscI TGGCCA 3 cut(s) 155, 1418, 1567
MseI TTAA 7 cut(s) 288, 858, 870, 924, 951, 963, 1524
MslI CAYNNNNRTG 1 cut(s) 1322
Msp20I TGGCCA 3 cut(s) 155, 1418, 1567
MspCI CTTAAG 2 cut(s) 287, 869
MspI CCGG 3 cut(s) 119, 769, 911
MspR9I CCNGG 4 cut(s) 119, 359, 996, 1478
MunI CAATTG 2 cut(s) 192, 311
MvaI CCWGG 3 cut(s) 359, 996, 1478
MvnI CGCG 2 cut(s) 484, 1312
MwoI GCNNNNNNNGC 8 cut(s) 220, 401, 421, 521, 1277, 1286, 1647, 1656
NaeI GCCGGC 1 cut(s) 770
NciI CCSGG 1 cut(s) 119
NdeII GATC 6 cut(s) 160, 699, 747, 796, 1192, 1251
NgoMIV GCCGGC 1 cut(s) 768
NlaIII CATG 1 cut(s) 524
NlaIV GGNNCC 2 cut(s) 439, 1148
NmuCI GTSAC 1 cut(s) 1204
NsiI ATGCAT 2 cut(s) 406, 1291
PaeR7I CTCGAG 2 cut(s) 86, 548
PciSI GCTCTTC 2 cut(s) 87, 836
PcsI WCGNNNNNNNCGW 2 cut(s) 108, 845
PdiI GCCGGC 1 cut(s) 770
PfeI GAWTC 4 cut(s) 274, 334, 1139, 1447
Pfl23II CGTACG 1 cut(s) 215
PfoI TCCNGGA 1 cut(s) 994
PkrI GCNGC 8 cut(s) 253, 256, 630, 811, 888, 1365, 1588, 1643
PleI GAGTC 2 cut(s) 370, 835
PpsI GAGTC 2 cut(s) 370, 835
Psp124BI GAGCTC 2 cut(s) 99, 225
Psp6I CCWGG 3 cut(s) 357, 994, 1476
PspGI CCWGG 3 cut(s) 357, 994, 1476
PspLI CGTACG 1 cut(s) 215
PspN4I GGNNCC 2 cut(s) 439, 1148
PspPI GGNCC 4 cut(s) 197, 908, 1147, 1474
PspXI VCTCGAGB 1 cut(s) 86
PsrI GAACNNNNNNTAC 2 cut(s) 1487, 1519
PstI CTGCAG 1 cut(s) 256
RsaI GTAC 5 cut(s) 217, 242, 356, 740, 915
RsaNI GTAC 5 cut(s) 216, 241, 355, 739, 914
RseI CAYNNNNRTG 1 cut(s) 1322
SacI GAGCTC 2 cut(s) 99, 225
SapI GCTCTTC 2 cut(s) 87, 836
SaqAI TTAA 7 cut(s) 288, 858, 870, 924, 951, 963, 1524
SatI GCNGC 8 cut(s) 252, 255, 629, 810, 887, 1364, 1587, 1642
Sau3AI GATC 6 cut(s) 160, 699, 747, 796, 1192, 1251
Sau96I GGNCC 4 cut(s) 197, 908, 1147, 1474
SchI GAGTC 2 cut(s) 370, 836
ScrFI CCNGG 4 cut(s) 119, 359, 996, 1478
SduI GDGCHC 4 cut(s) 99, 225, 721, 848
SfaNI GCATC 6 cut(s) 391, 413, 615, 1289, 1298, 1668
SfcI CTRYAG 1 cut(s) 252
Sfr274I CTCGAG 2 cut(s) 86, 548
SinI GGWCC 3 cut(s) 197, 1147, 1474
SlaI CTCGAG 2 cut(s) 86, 548
SmiI ATTTAAAT 1 cut(s) 964
SmiMI CAYNNNNRTG 1 cut(s) 1322
SmlI CTYRAG 4 cut(s) 86, 287, 548, 869
SmoI CTYRAG 4 cut(s) 86, 287, 548, 869
SsiI CCGC 5 cut(s) 615, 810, 1091, 1622, 1644
SspI AATATT 1 cut(s) 933
SspMI CTAG 6 cut(s) 36, 380, 416, 728, 761, 1227
SstI GAGCTC 2 cut(s) 99, 225
StyD4I CCNGG 4 cut(s) 117, 357, 994, 1476
StyI CCWWGG 1 cut(s) 971
SwaI ATTTAAAT 1 cut(s) 964
TaaI ACNGT 3 cut(s) 1204, 1394, 1511
TaiI ACGT 2 cut(s) 858, 919
TaqI TCGA 6 cut(s) 87, 99, 549, 575, 635, 1445
TauI GCSGC 1 cut(s) 812
TfiI GAWTC 4 cut(s) 274, 334, 1139, 1447
Tru1I TTAA 7 cut(s) 288, 858, 870, 924, 951, 963, 1524
Tru9I TTAA 7 cut(s) 288, 858, 870, 924, 951, 963, 1524
TscAI CASTG 2 cut(s) 163, 287
TseFI GTSAC 1 cut(s) 1204
TseI GCWGC 7 cut(s) 251, 254, 628, 886, 1363, 1586, 1641
Tsp45I GTSAC 1 cut(s) 1204
TspDTI ATGAA 5 cut(s) 692, 1167, 1290, 1343, 1422
TspGWI ACGGA 5 cut(s) 233, 1069, 1139, 1334, 1361
TspRI CASTG 2 cut(s) 163, 287
Vha464I CTTAAG 2 cut(s) 287, 869
VpaK11BI GGWCC 3 cut(s) 197, 1147, 1474
XhoI CTCGAG 2 cut(s) 86, 548
XspI CTAG 6 cut(s) 36, 380, 416, 728, 761, 1227
Zsp2I ATGCAT 2 cut(s) 406, 1291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.