RLG00000019381

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000833
Physical Location & Seq
Forward (+)
51228819 .. 51234203
5385 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019381

Sequence Viewer

Length: 2460 bp
ATGATGAATTCTGTACTTGCAGATAAGCTCTTGATGGCACTTGATCGATTGCGAGAGAGTGAGATAGAGTTTAGGGTTTCGCACAAAAAGTCCCCCTTCTCCGTCCGGCGGCGTGCCCTAAGGGCTCTGTCGTCGGACGGGCTGTGTTGTTCTGCCTACGTTGGTGGAGGTAGTGGTGTCCTCCCTTGCAGGGGGTTCGACTTGGGCCGCCGCGAATTGAGGAAGGTGGAGGAGGAGATCATGGTCACTGTTAGGCGAGATCTAGTTCTGGTCGGAGTGATCCGGATGGAGGATGGCTGGGCTGGTGGTGACCGGGTTGACAGATGGTGGCAGGTGGCGACTTTGCAGGTGGTGGTGCGACAGGTTCTGCGGGATGGAGGGATCTCGGCGCAAAGAAGGGGCTGCCGGTGGTGGGACAACACGGGATTTGCAAGCGGGCTGGCGGTGGTGGACTTGCAGCAGGCCGGTCAGACATGGCTGGCTCCGATCTCCCATGGCTGTCATAACTTCAGCAATTTGAGAACTGCACACTACGACGGAAAGTCAAAGGAAATGATGGTTGAAGGTGAACCTCGGTGTGGATGGAGTGGGGCTCTTGGGGAGGATGACGACGCTGGGATTGAGATCGGTGATGGGCTTGAGGGGGCTGGTGCTGAAGATGGTGAGGTAGAAGACGGACAGGGATTGGATGTGGTGAGCGATGAGGTGGGTGTATTGGGAGCCGTAGTCGAGGATTGTGGAGCTTTGCTGGTGTTGAAGGTTTTGCAGAACAACAGCCTAAACATGTCTTCTCTCCAACCAGCATTCTCTTCCAAATCCAGTTCCAACTTCAATGAGCTTCAATGGGTGATTCAAATACGAAAAACCCTAGAGGAGGAGCTCGAGGAAGATGGTGAAATCCCTGTCTCCATTTTCAACGTCCCCAAATCCCTCTTGGCTAGTGACCCGGAATCGTACACCCCTCAAGAGGTTGCAATCGGTCCTTATCATTATTGGCGTCCGGAGCTGTATGAGATGGAGAGGTACAAAGTGGCTGCGGCTAAACGAACCCAAAAGCAGCTCCAAACCCTCAAATTCCAGCACCTTGTTGACCAATTGACGAGGTTCGAGCCGAGGATTCGTGCTTGTTACCACAAGTACTTGGAGTTTAATGGTGAGACTTTGGGGTGGATGATGGCCATTGATGCTTCGTTTTTCCTCGAAATCCTCCAAGTCTATGCGGTCCAAGACGGGAAGACTTTGACAAGAGTTTCTTCAAGGATGGCGCATTTGGTTGACCATGCAGGAAGGAAGTCAGCGCATCACGCAATCCTTAGGGACTTGGTAATGCTTGAGAATCAAATCCCACTGTTTGTGTTGAGAAAAGTGTTGGAATTTCAGTTTCCCACGTTGGAATGTGCCGACGAGATGCTACTTTCCATGTTTATGGGATTGTGCAAAGAGCTCTCACCATTCAAGATGAATGATGAGGACTCGCAAAAGATCCGAGTCTCGAGTTGTTGTCACTTGCTGGACTTTTTGTACCACATGATCACCCCCAAGTTAGAAGCTGGGCCGTCGGAAATCACAGAAGCCGAGGGTGGGGAGGCCACACCACACAAGGGAAAATCATCAGATAACTCGAATTTCGTCAAACAATTTCTGGAGGAAGTATGGAAGCTGCTTTCGAAGTTGAATAAAGGTCCAATACGTCTTCTGAAAAAAATTCTAGTATCTGGACCCGTAAAGGTGATATTCAAATTGCCTTGGACTATCCTCTCCAACCTTCCTGGATTTGCAATTTTGAAAAAACCTCTTGAGTCCCTATTTTCCTCCCAAGACAAAGAAGTAGTCAAACCCGAAGATGAAAATTCGAGCAGTGGCATTAGCAAACCTCCGTTGATAGAGGAGATCACTATTCCATCTGTCTCTGATCTGTCAAAATCTGGTGTCAAGTTCTTGCCCACAAATAGCATTTCGAGCATCTCTTTCGATTCTAAGACTTGCTCATTTTACCTCCCGAGTACTAGCTTAGATGGGAACACAGAGGTGATCCTGAGAAACTTGGTGGCCTACGAAGCATCAACTGCATCGGGGCCATTGATTTTTACTCGCTACACCGAGTTGATGAATGGGATCATAGACACCGAGGAGGACGCCAAGTTGCTTAGAGAGAAAGGTATCATCTTGAACCGTTTGAAGAGTGATGAAGAAGTGGCAAAGCTGTTCAATGGCATGAGCAAGTCCATTAGATTGACCAAAGTGCCCTTCTTGGATAAGGCAATCGAAGATGCCAACAAGTATTACAATGGTAGATGGAAGGTGAAGATGAGGAAGTTTTTTAAAACTTATGTGATTGGTTGCTGGCCAGTTCTGGCTTTGCTCGCTGCCATTTTGCTCCTGCTCTTGATGACATTGCAAGCATTTTGCTCAGTATACAGCTGCAGTCGCATATTTCATATCAACACTACCGCAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

820

Amino Acids

91.68

Weight (kDa)

6.03

Isoelectric Point (pI)

47.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 304 - 796 2.3e-104 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 322, 337
Acc36I ACCTGC 2 cut(s) 322, 337
AccI GTMKAC 1 cut(s) 2415
AccII CGCG 1 cut(s) 213
AccIII TCCGGA 2 cut(s) 282, 1000
AciI CCGC 9 cut(s) 109, 208, 211, 370, 435, 443, 1037, 1220, 2451
AclWI GGATC 5 cut(s) 274, 389, 1477, 2026, 2123
AcoI YGGCCR 2 cut(s) 1176, 2345
AcsI RAATTY 6 cut(s) 7, 1073, 1373, 1624, 1704, 1849
AcuI CTGAAG 2 cut(s) 493, 675
AcyI GRCGYC 2 cut(s) 997, 2136
AfaI GTAC 6 cut(s) 15, 956, 1025, 1139, 1523, 2005
AflIII ACRYGT 1 cut(s) 783
AhdI GACNNNNNGTC 1 cut(s) 541
AjnI CCWGG 1 cut(s) 1768
AjuI GAANNNNNNNTTGG 2 cut(s) 2231, 2263
AleI CACNNNNGTG 1 cut(s) 2027
Alw21I GWGCWC 2 cut(s) 882, 1446
Alw26I GTCTC 4 cut(s) 910, 1151, 1495, 1912
AlwI GGATC 5 cut(s) 274, 389, 1477, 2026, 2123
AlwNI CAGNNNCTG 1 cut(s) 367
Ama87I CYCGRG 3 cut(s) 881, 1492, 1999
Aor13HI TCCGGA 2 cut(s) 282, 1000
AoxI GGCC 8 cut(s) 205, 462, 1176, 1553, 1587, 2049, 2075, 2345
ApeKI GCWGC 7 cut(s) 402, 457, 1034, 1057, 1660, 2366, 2421
ApoI RAATTY 6 cut(s) 7, 1073, 1373, 1624, 1704, 1849
ArsI GACNNNNNNTTYG 2 cut(s) 1815, 1847
AspLEI GCGC 3 cut(s) 391, 1267, 1300
AspS9I GGNCC 7 cut(s) 205, 980, 1222, 1553, 1682, 1718, 2075
AsuC2I CCSGG 2 cut(s) 314, 947
AsuII TTCGAA 1 cut(s) 1667
AvaI CYCGRG 3 cut(s) 881, 1492, 1999
AvaII GGWCC 4 cut(s) 980, 1222, 1682, 1718
AxyI CCTNAGG 2 cut(s) 119, 1313
BaeGI GKGCMC 2 cut(s) 118, 2247
BalI TGGCCA 2 cut(s) 1178, 2347
BanII GRGCYC 4 cut(s) 127, 595, 882, 1446
BbsI GAAGAC 4 cut(s) 678, 780, 1241, 1685
Bbv12I GWGCWC 2 cut(s) 882, 1446
BbvI GCAGC 7 cut(s) 389, 469, 1021, 1069, 1647, 2353, 2408
BceAI ACGGC 2 cut(s) 707, 1540
BcgI CGANNNNNNTGC 4 cut(s) 178, 212, 1951, 1985
BciT130I CCWGG 1 cut(s) 1770
BclI TGATCA 1 cut(s) 1530
BcnI CCSGG 2 cut(s) 314, 947
BcoDI GTCTC 4 cut(s) 910, 1151, 1495, 1912
BfaI CTAG 5 cut(s) 263, 869, 939, 1709, 2007
BfmI CTRYAG 1 cut(s) 2422
BfuAI ACCTGC 2 cut(s) 322, 337
BglI GCCNNNNNGGC 1 cut(s) 122
BglII AGATCT 1 cut(s) 259
BmcAI AGTACT 2 cut(s) 1139, 2005
Bme1390I CCNGG 3 cut(s) 314, 947, 1770
Bme18I GGWCC 4 cut(s) 980, 1222, 1682, 1718
BmeRI GACNNNNNGTC 1 cut(s) 541
BmeT110I CYCGRG 3 cut(s) 881, 1492, 1999
BmgT120I GGNCC 7 cut(s) 205, 980, 1222, 1553, 1682, 1718, 2075
BmiI GGNNCC 4 cut(s) 483, 721, 1720, 2076
BmrFI CCNGG 3 cut(s) 314, 947, 1770
BmsI GCATC 7 cut(s) 1174, 1309, 1398, 1971, 2069, 2078, 2260
BpiI GAAGAC 4 cut(s) 678, 780, 1241, 1685
BplI GAGNNNNNCTC 2 cut(s) 577, 609
BpmI CTGGAG 1 cut(s) 1664
Bpu14I TTCGAA 1 cut(s) 1667
BpuEI CTTGAG 4 cut(s) 659, 948, 1352, 1817
BpuMI CCSGG 2 cut(s) 314, 947
Bsa29I ATCGAT 1 cut(s) 46
BsaBI GATNNNNATC 1 cut(s) 623
BsaHI GRCGYC 2 cut(s) 997, 2136
BsaJI CCNNGG 6 cut(s) 493, 572, 1112, 1575, 1745, 2127
BsaWI WCCGGW 2 cut(s) 282, 1000
BsaXI ACNNNNNCTCC 2 cut(s) 711, 741
Bse118I RCCGGY 2 cut(s) 405, 464
Bse1I ACTGG 2 cut(s) 819, 2348
Bse21I CCTNAGG 2 cut(s) 119, 1313
Bse3DI GCAATG 1 cut(s) 2393
Bse8I GATNNNNATC 1 cut(s) 623
BseAI TCCGGA 2 cut(s) 282, 1000
BseBI CCWGG 1 cut(s) 1770
BseCI ATCGAT 1 cut(s) 46
BseDI CCNNGG 6 cut(s) 493, 572, 1112, 1575, 1745, 2127
BseGI GGATG 8 cut(s) 291, 298, 379, 587, 610, 694, 1176, 1266
BseJI GATNNNNATC 1 cut(s) 623
BseMI GCAATG 1 cut(s) 2393
BseMII CTCAG 2 cut(s) 2027, 2424
BseNI ACTGG 2 cut(s) 819, 2348
BseRI GAGGAG 6 cut(s) 245, 248, 887, 890, 1901, 2144
BseSI GKGCMC 2 cut(s) 118, 2247
BseXI GCAGC 7 cut(s) 389, 469, 1021, 1069, 1647, 2353, 2408
BseYI CCCAGC 3 cut(s) 297, 614, 1550
BsgI GTGCAG 1 cut(s) 510
Bsh1236I CGCG 1 cut(s) 213
BshFI GGCC 8 cut(s) 207, 464, 1178, 1555, 1589, 2051, 2077, 2347
BshVI ATCGAT 1 cut(s) 46
BsiHKAI GWGCWC 2 cut(s) 882, 1446
BsiHKCI CYCGRG 3 cut(s) 881, 1492, 1999
BsiSI CCGG 7 cut(s) 106, 283, 313, 406, 465, 947, 1001
BslFI GGGAC 5 cut(s) 76, 428, 905, 1331, 1786
BsmAI GTCTC 4 cut(s) 910, 1151, 1495, 1912
BsmFI GGGAC 5 cut(s) 76, 428, 905, 1331, 1786
BsmI GAATGC 1 cut(s) 803
BsnI GGCC 8 cut(s) 207, 464, 1178, 1555, 1589, 2051, 2077, 2347
BsoBI CYCGRG 3 cut(s) 881, 1492, 1999
Bsp119I TTCGAA 1 cut(s) 1667
Bsp1286I GDGCHC 6 cut(s) 118, 127, 595, 882, 1446, 2247
Bsp13I TCCGGA 2 cut(s) 282, 1000
Bsp19I CCATGG 1 cut(s) 493
BspACI CCGC 9 cut(s) 109, 208, 211, 370, 435, 443, 1037, 1220, 2451
BspANI GGCC 8 cut(s) 207, 464, 1178, 1555, 1589, 2051, 2077, 2347
BspCNI CTCAG 2 cut(s) 2028, 2423
BspDI ATCGAT 1 cut(s) 46
BspEI TCCGGA 2 cut(s) 282, 1000
BspFNI CGCG 1 cut(s) 213
BspLI GGNNCC 4 cut(s) 483, 721, 1720, 2076
BspMAI CTGCAG 1 cut(s) 2426
BspMI ACCTGC 2 cut(s) 322, 337
BspPI GGATC 5 cut(s) 274, 389, 1477, 2026, 2123
BspT104I TTCGAA 1 cut(s) 1667
BsrDI GCAATG 1 cut(s) 2393
BsrFI RCCGGY 2 cut(s) 405, 464
BsrI ACTGG 2 cut(s) 819, 2348
BssAI RCCGGY 2 cut(s) 405, 464
BssECI CCNNGG 6 cut(s) 493, 572, 1112, 1575, 1745, 2127
BssNAI GTATAC 1 cut(s) 2416
BssNI GRCGYC 2 cut(s) 997, 2136
BssT1I CCWWGG 2 cut(s) 493, 1745
Bst1107I GTATAC 1 cut(s) 2416
Bst2UI CCWGG 1 cut(s) 1770
Bst4CI ACNGT 3 cut(s) 250, 1350, 2174
Bst6I CTCTTC 2 cut(s) 814, 2174
BstACI GRCGYC 2 cut(s) 997, 2136
BstAPI GCANNNNNTGC 1 cut(s) 2066
BstBI TTCGAA 1 cut(s) 1667
BstC8I GCNNGC 9 cut(s) 114, 433, 437, 441, 462, 480, 2345, 2364, 2400
BstDEI CTNAG 8 cut(s) 119, 1313, 1977, 2011, 2036, 2147, 2410, 2457
BstDSI CCRYGG 1 cut(s) 493
BstEII GGTNACC 1 cut(s) 308
BstENI CCTNNNNNAGG 1 cut(s) 872
BstF5I GGATG 8 cut(s) 291, 298, 379, 587, 610, 694, 1176, 1266
BstFNI CGCG 1 cut(s) 213
BstHHI GCGC 3 cut(s) 391, 1267, 1300
BstMAI GTCTC 4 cut(s) 910, 1151, 1495, 1912
BstMWI GCNNNNNNNGC 9 cut(s) 122, 1003, 1184, 1304, 1959, 2057, 2066, 2363, 2427
BstNI CCWGG 1 cut(s) 1770
BstNSI RCATGY 1 cut(s) 787
BstPI GGTNACC 1 cut(s) 308
BstSCI CCNGG 3 cut(s) 312, 945, 1768
BstSFI CTRYAG 1 cut(s) 2422
BstSLI GKGCMC 2 cut(s) 118, 2247
BstUI CGCG 1 cut(s) 213
BstV1I GCAGC 7 cut(s) 389, 469, 1021, 1069, 1647, 2353, 2408
BstV2I GAAGAC 4 cut(s) 678, 780, 1241, 1685
BstX2I RGATCY 3 cut(s) 259, 381, 1482
BstXI CCANNNNNNTGG 1 cut(s) 1426
BstYI RGATCY 3 cut(s) 259, 381, 1482
BstZ17I GTATAC 1 cut(s) 2416
Bsu15I ATCGAT 1 cut(s) 46
Bsu36I CCTNAGG 2 cut(s) 119, 1313
BsuRI GGCC 8 cut(s) 207, 464, 1178, 1555, 1589, 2051, 2077, 2347
BsuTUI ATCGAT 1 cut(s) 46
BtgI CCRYGG 1 cut(s) 493
BtgZI GCGATG 1 cut(s) 714
BtsCI GGATG 8 cut(s) 291, 298, 379, 587, 610, 694, 1176, 1266
BtsI GCAGTG 1 cut(s) 1864
BtsIMutI CAGTG 3 cut(s) 246, 1346, 1864
BveI ACCTGC 2 cut(s) 322, 337
Cac8I GCNNGC 9 cut(s) 114, 433, 437, 441, 462, 480, 2345, 2364, 2400
CaiI CAGNNNCTG 1 cut(s) 367
CfoI GCGC 3 cut(s) 391, 1267, 1300
Cfr10I RCCGGY 2 cut(s) 405, 464
Cfr13I GGNCC 7 cut(s) 205, 980, 1222, 1553, 1682, 1718, 2075
ClaI ATCGAT 1 cut(s) 46
CseI GACGC 3 cut(s) 620, 986, 2144
Csp6I GTAC 6 cut(s) 14, 955, 1024, 1138, 1522, 2004
CviAII CATG 8 cut(s) 241, 474, 494, 784, 1280, 1420, 1528, 2215
CviQI GTAC 6 cut(s) 14, 955, 1024, 1138, 1522, 2004
DdeI CTNAG 8 cut(s) 119, 1313, 1977, 2011, 2036, 2147, 2410, 2457
DraI TTTAAA 1 cut(s) 2323
DriI GACNNNNNGTC 1 cut(s) 541
EaeI YGGCCR 2 cut(s) 1176, 2345
Eam1104I CTCTTC 2 cut(s) 814, 2174
Eam1105I GACNNNNNGTC 1 cut(s) 541
EarI CTCTTC 2 cut(s) 814, 2174
Ecl136II GAGCTC 2 cut(s) 880, 1444
Eco130I CCWWGG 2 cut(s) 493, 1745
Eco24I GRGCYC 4 cut(s) 127, 595, 882, 1446
Eco47I GGWCC 4 cut(s) 980, 1222, 1682, 1718
Eco53kI GAGCTC 2 cut(s) 880, 1444
Eco57I CTGAAG 2 cut(s) 493, 675
Eco81I CCTNAGG 2 cut(s) 119, 1313
Eco88I CYCGRG 3 cut(s) 881, 1492, 1999
Eco91I GGTNACC 1 cut(s) 308
EcoICRI GAGCTC 2 cut(s) 880, 1444
EcoNI CCTNNNNNAGG 1 cut(s) 872
EcoO65I GGTNACC 1 cut(s) 308
EcoRI GAATTC 1 cut(s) 7
EcoRII CCWGG 1 cut(s) 1768
EcoT14I CCWWGG 2 cut(s) 493, 1745
EcoT38I GRGCYC 4 cut(s) 127, 595, 882, 1446
ErhI CCWWGG 2 cut(s) 493, 1745
FaeI CATG 8 cut(s) 244, 477, 497, 787, 1283, 1423, 1531, 2218
FalI AAGNNNNNCTT 4 cut(s) 80, 112, 1237, 1269
FaqI GGGAC 5 cut(s) 76, 428, 905, 1331, 1786
FatI CATG 8 cut(s) 240, 473, 493, 783, 1279, 1419, 1527, 2214
FauI CCCGC 2 cut(s) 363, 428
FbaI TGATCA 1 cut(s) 1530
FblI GTMKAC 1 cut(s) 2415
FokI GGATG 8 cut(s) 298, 305, 386, 594, 617, 701, 1183, 1273
FriOI GRGCYC 4 cut(s) 127, 595, 882, 1446
FspBI CTAG 5 cut(s) 263, 869, 939, 1709, 2007
GlaI GCGC 3 cut(s) 390, 1266, 1299
GsaI CCCAGC 3 cut(s) 301, 618, 1554
GsuI CTGGAG 1 cut(s) 1664
HaeIII GGCC 8 cut(s) 207, 464, 1178, 1555, 1589, 2051, 2077, 2347
HapII CCGG 7 cut(s) 106, 283, 313, 406, 465, 947, 1001
HgaI GACGC 3 cut(s) 620, 986, 2144
HhaI GCGC 3 cut(s) 391, 1267, 1300
Hin1I GRCGYC 2 cut(s) 997, 2136
Hin1II CATG 8 cut(s) 244, 477, 497, 787, 1283, 1423, 1531, 2218
Hin6I GCGC 3 cut(s) 389, 1265, 1298
HinP1I GCGC 3 cut(s) 389, 1265, 1298
HincII GTYRAC 3 cut(s) 319, 1090, 1276
HindII GTYRAC 3 cut(s) 319, 1090, 1276
HinfI GANTC 8 cut(s) 850, 950, 1117, 1336, 1472, 1488, 1799, 1973
HpaII CCGG 7 cut(s) 106, 283, 313, 406, 465, 947, 1001
Hpy166II GTNNAC 7 cut(s) 319, 451, 569, 957, 1090, 1276, 2416
Hpy188I TCNGA 9 cut(s) 136, 275, 471, 486, 1487, 1561, 1615, 1698, 1912
Hpy8I GTNNAC 7 cut(s) 319, 451, 569, 957, 1090, 1276, 2416
Hpy99I CGWCG 5 cut(s) 136, 539, 614, 1406, 1561
HpyAV CCTTC 9 cut(s) 106, 217, 390, 557, 751, 1281, 1775, 2257, 2293
HpyCH4III ACNGT 3 cut(s) 250, 1350, 2174
HpyCH4IV ACGT 4 cut(s) 159, 918, 1388, 1690
HpyF10VI GCNNNNNNNGC 9 cut(s) 122, 1003, 1184, 1304, 1959, 2057, 2066, 2363, 2427
HpyF3I CTNAG 8 cut(s) 119, 1313, 1977, 2011, 2036, 2147, 2410, 2457
HpySE526I ACGT 4 cut(s) 159, 918, 1388, 1690
Hsp92I GRCGYC 2 cut(s) 997, 2136
Hsp92II CATG 8 cut(s) 244, 477, 497, 787, 1283, 1423, 1531, 2218
HspAI GCGC 3 cut(s) 389, 1265, 1298
Kpn2I TCCGGA 2 cut(s) 282, 1000
Ksp22I TGATCA 1 cut(s) 1530
LmnI GCTCC 7 cut(s) 487, 719, 740, 877, 1003, 1065, 2382
Lsp1109I GCAGC 7 cut(s) 389, 469, 1021, 1069, 1647, 2353, 2408
LweI GCATC 7 cut(s) 1174, 1309, 1398, 1971, 2069, 2078, 2260
MaeI CTAG 5 cut(s) 263, 869, 939, 1709, 2007
MaeII ACGT 4 cut(s) 159, 918, 1388, 1690
MaeIII GTNAC 5 cut(s) 244, 308, 941, 1127, 1502
MfeI CAATTG 1 cut(s) 1094
MflI RGATCY 3 cut(s) 259, 381, 1482
MhlI GDGCHC 6 cut(s) 118, 127, 595, 882, 1446, 2247
MlsI TGGCCA 2 cut(s) 1178, 2347
MluNI TGGCCA 2 cut(s) 1178, 2347
MlyI GAGTC 3 cut(s) 1466, 1497, 1808
MmeI TCCRAC 8 cut(s) 114, 253, 820, 849, 1350, 1371, 1539, 1785
Mox20I TGGCCA 2 cut(s) 1178, 2347
MroI TCCGGA 2 cut(s) 282, 1000
MscI TGGCCA 2 cut(s) 1178, 2347
MseI TTAA 2 cut(s) 1149, 2322
MslI CAYNNNNRTG 2 cut(s) 1424, 2027
Msp20I TGGCCA 2 cut(s) 1178, 2347
MspA1I CMGCKG 1 cut(s) 2421
MspI CCGG 7 cut(s) 106, 283, 313, 406, 465, 947, 1001
MspR9I CCNGG 3 cut(s) 314, 947, 1770
MunI CAATTG 1 cut(s) 1094
Mva1269I GAATGC 1 cut(s) 803
MvaI CCWGG 1 cut(s) 1770
MvnI CGCG 1 cut(s) 213
MwoI GCNNNNNNNGC 9 cut(s) 122, 1003, 1184, 1304, 1959, 2057, 2066, 2363, 2427
NciI CCSGG 2 cut(s) 314, 947
NcoI CCATGG 1 cut(s) 493
NlaIII CATG 8 cut(s) 244, 477, 497, 787, 1283, 1423, 1531, 2218
NlaIV GGNNCC 4 cut(s) 483, 721, 1720, 2076
NmeAIII GCCGAG 3 cut(s) 365, 1137, 1600
NmuCI GTSAC 4 cut(s) 244, 308, 941, 1502
NspI RCATGY 1 cut(s) 787
NspV TTCGAA 1 cut(s) 1667
OliI CACNNNNGTG 1 cut(s) 2027
PaeR7I CTCGAG 2 cut(s) 881, 1492
PaqCI CACCTGC 2 cut(s) 322, 337
PciI ACATGT 1 cut(s) 783
PctI GAATGC 1 cut(s) 803
PfeI GAWTC 5 cut(s) 850, 950, 1117, 1336, 1973
PfoI TCCNGGA 1 cut(s) 1768
PleI GAGTC 3 cut(s) 1466, 1496, 1807
PpsI GAGTC 3 cut(s) 1466, 1496, 1807
PscI ACATGT 1 cut(s) 783
Psp124BI GAGCTC 2 cut(s) 882, 1446
Psp6I CCWGG 1 cut(s) 1768
PspEI GGTNACC 1 cut(s) 308
PspFI CCCAGC 3 cut(s) 297, 614, 1550
PspGI CCWGG 1 cut(s) 1768
PspN4I GGNNCC 4 cut(s) 483, 721, 1720, 2076
PspPI GGNCC 7 cut(s) 205, 980, 1222, 1553, 1682, 1718, 2075
PspXI VCTCGAGB 1 cut(s) 881
PstI CTGCAG 1 cut(s) 2426
PstNI CAGNNNCTG 1 cut(s) 367
PsuI RGATCY 3 cut(s) 259, 381, 1482
PvuII CAGCTG 1 cut(s) 2421
RsaI GTAC 6 cut(s) 15, 956, 1025, 1139, 1523, 2005
RsaNI GTAC 6 cut(s) 14, 955, 1024, 1138, 1522, 2004
RseI CAYNNNNRTG 2 cut(s) 1424, 2027
SacI GAGCTC 2 cut(s) 882, 1446
SaqAI TTAA 2 cut(s) 1149, 2322
Sau96I GGNCC 7 cut(s) 205, 980, 1222, 1553, 1682, 1718, 2075
ScaI AGTACT 2 cut(s) 1139, 2005
SchI GAGTC 3 cut(s) 1466, 1497, 1808
ScrFI CCNGG 3 cut(s) 314, 947, 1770
SduI GDGCHC 6 cut(s) 118, 127, 595, 882, 1446, 2247
SfaNI GCATC 7 cut(s) 1174, 1309, 1398, 1971, 2069, 2078, 2260
SfcI CTRYAG 1 cut(s) 2422
Sfr274I CTCGAG 2 cut(s) 881, 1492
SfuI TTCGAA 1 cut(s) 1667
SinI GGWCC 4 cut(s) 980, 1222, 1682, 1718
SlaI CTCGAG 2 cut(s) 881, 1492
SmiMI CAYNNNNRTG 2 cut(s) 1424, 2027
SmlI CTYRAG 6 cut(s) 638, 881, 963, 1331, 1492, 1796
SmoI CTYRAG 6 cut(s) 638, 881, 963, 1331, 1492, 1796
SsiI CCGC 9 cut(s) 109, 208, 211, 370, 435, 443, 1037, 1220, 2451
SspMI CTAG 5 cut(s) 263, 869, 939, 1709, 2007
SstI GAGCTC 2 cut(s) 882, 1446
StyD4I CCNGG 3 cut(s) 312, 945, 1768
StyI CCWWGG 2 cut(s) 493, 1745
TaaI ACNGT 3 cut(s) 250, 1350, 2174
TaiI ACGT 4 cut(s) 162, 921, 1391, 1693
TaqII GACCGA 1 cut(s) 968
TatI WGTACW 3 cut(s) 13, 1137, 2003
TauI GCSGC 4 cut(s) 112, 210, 213, 1040
TfiI GAWTC 5 cut(s) 850, 950, 1117, 1336, 1973
Tru1I TTAA 2 cut(s) 1149, 2322
Tru9I TTAA 2 cut(s) 1149, 2322
TscAI CASTG 3 cut(s) 253, 1353, 1864
TseFI GTSAC 4 cut(s) 244, 308, 941, 1502
TseI GCWGC 7 cut(s) 402, 457, 1034, 1057, 1660, 2366, 2421
Tsp45I GTSAC 4 cut(s) 244, 308, 941, 1502
TspDTI ATGAA 6 cut(s) 20, 1475, 1860, 2123, 2202, 2426
TspGWI ACGGA 4 cut(s) 91, 552, 690, 1866
TspRI CASTG 3 cut(s) 253, 1353, 1864
VpaK11BI GGWCC 4 cut(s) 980, 1222, 1682, 1718
XagI CCTNNNNNAGG 1 cut(s) 872
XapI RAATTY 6 cut(s) 7, 1073, 1373, 1624, 1704, 1849
XceI RCATGY 1 cut(s) 787
XcmI CCANNNNNNNNNTGG 1 cut(s) 931
XhoI CTCGAG 2 cut(s) 881, 1492
XmiI GTMKAC 1 cut(s) 2415
XspI CTAG 5 cut(s) 263, 869, 939, 1709, 2007
ZrmI AGTACT 2 cut(s) 1139, 2005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.