Rw5G028780

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000833
Physical Location & Seq
Forward (+)
43693174 .. 43694838
1665 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G028780.1

Sequence Viewer

Length: 1665 bp
ATGTCTTCTCTCCAACCAATATTCTCTTACAAATCCAGTTCCAACTTCAGTGAGGATCAATGGGTGATTCAAATCGGAAAAACTGTAGAGGAAGAGCTCGACGATGATAGTGAAATCCCTGTCTCCATTTTCAACGTCCCCAAATCCCTCTTGGCTAGTGACCCGGAATCGTACACCCCTCAACAGGTTGCGGTCGGTCCTTACCATTATTGGCGTCCGGAGCTGTATGAGATGCAGATTTACAAAGTGGCTACAGCTAAACAAACCCAAAAGCAGCTCCAGCTCAAAACCCTCACATTCCAGCACCCTGTTGACCAATTGACGAGGTCCGAGCTGAGGATTCGTGCTTGTTACCACAAGTACTTAGAGGTTAGTGGTGAGACTTTGGGGTGGATGATGGCCATTGATGCTTCGTTTTTCCTTGAAATCCTCCAAGTCTATGAGGTCCAAGAAGGCCCAAGAGTTTCTTCAAGGATGGCGCATTTGGTTGACCATGCAGGAAGGAAGTCAGCGCATCATGCAATCCTTAGGGACTTGGTGATGCTTGAGAACCAAATCCCACGATTTGTTTTGAAAAAAGTGTTGAAGTTTAAGCTCCCAGCGTTGGAATGTGCCAAAGATAAGCTTATTTCCATGTTTATGGGATTGTGCAAAGAGCTCTCCCCATTCAAGATGAATGACGAAGACATGCCAAATATGGGAGTGACTATCCAATTCTCGAGTTGTTTTCACTTGCTGGACTCCTTGTACCGCCTGATCACCCCCAAGTTAGTAGCCGAGCCATCGGAAATCATAGAAGCCGTGGGATATGAGGCCGCACAACAACAGAAGGGAAAATCATTTGTTAATTTTAATTTCGTCAAACAATTTCTGAAGCAGGTACGGAAGCTGCTATCGAAGTTGAATAAAGGCCCAATACCTCTTCTGAGAAAAATTCCAATATCTGGACCTGTAAAAGTGATATCCGACCTGCCTTGGACTATCCTCTTTGACCTTCTTTCCACCCAAGACAAAGAAGCAGTCAAACCCGAAGATGACAGTTCGAGCAATGGCATTAGCAAACCGCCGAAGATAGAGGAGATCACCATCCCATCAGTCTCCGATCTCTCAAAATCTTGTGTCAAGTTCTTGGCCGGCGGAATTAGAATTTCAGACATCTCTTTCAATGCTGAAACTGGCTCATTTACCCTCCCGATTACTAGCTTAGATGGGAACACAGGGGTGATCCTGAGAAACTTGGTGGCCTATGAAGCATCAAGTGTATCGGGGCCATTGGTTTTCACTCGCTACACCGAGTTGATGAACGGGATCATAGACACCGAGGAGGATGTCAAGTTGCTTAGAGAGAAGCGTATCATCATGAACCATTTGAAGAGTGATGAAGAAGTGGCAAATCTGCTCAATGGCATGAGCAGGTCCATTAGATTGACCAAAGTGCCCTCCTTGGATAAGGTAATCGCAGATGCCAACGAGTATTACAATGGTAGATGGAAAGTGAAGATGAGGAAGTTTTTGAACACTTTTGTGTATGGTTCCTGGCCGTTACTGGCTTTCCTCACTGCCATTTTGCTCCTGCTCTTGATGACATTGCAAGCAGTCTGCTCAGTCTATAGGCGCAGTAGCATATTTCTTAGGCATATCAACACCACATTCACCATTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

554

Amino Acids

62.81

Weight (kDa)

8.48

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 43 - 527 2.1e-95 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 868, 978, 1404
AccB7I CCANNNNNTGG 1 cut(s) 944
AccIII TCCGGA 1 cut(s) 217
AciI CCGC 5 cut(s) 191, 751, 816, 1064, 1137
AclWI GGATC 3 cut(s) 63, 1219, 1316
AcoI YGGCCR 3 cut(s) 399, 1131, 1538
AcsI RAATTY 2 cut(s) 933, 1146
AcuI CTGAAG 2 cut(s) 31, 893
AcyI GRCGYC 1 cut(s) 214
AfaI GTAC 4 cut(s) 173, 362, 749, 882
AfiI CCNNNNNNNGG 5 cut(s) 184, 336, 604, 698, 944
AjnI CCWGG 1 cut(s) 1535
AjuI GAANNNNNNNTTGG 2 cut(s) 451, 483
AleI CACNNNNGTG 2 cut(s) 1220, 1523
Alw21I GWGCWC 2 cut(s) 99, 660
Alw26I GTCTC 3 cut(s) 127, 374, 1102
AlwI GGATC 3 cut(s) 63, 1219, 1316
Ama87I CYCGRG 1 cut(s) 718
Aor13HI TCCGGA 1 cut(s) 217
AoxI GGCC 8 cut(s) 399, 454, 813, 910, 1131, 1242, 1268, 1538
ApeKI GCWGC 2 cut(s) 274, 889
ApoI RAATTY 2 cut(s) 933, 1146
ArsI GACNNNNNNTTYG 2 cut(s) 1005, 1037
AspLEI GCGC 3 cut(s) 481, 514, 1617
AspS9I GGNCC 8 cut(s) 197, 327, 445, 455, 911, 947, 1268, 1416
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 7 cut(s) 76, 389, 550, 751, 1075, 1234, 1645
AvaI CYCGRG 1 cut(s) 718
AvaII GGWCC 5 cut(s) 197, 327, 445, 947, 1416
AxyI CCTNAGG 1 cut(s) 527
BaeGI GKGCMC 1 cut(s) 1440
BalI TGGCCA 1 cut(s) 401
BanII GRGCYC 2 cut(s) 99, 660
BbsI GAAGAC 1 cut(s) 690
Bbv12I GWGCWC 2 cut(s) 99, 660
BbvCI CCTCAGC 1 cut(s) 335
BbvI GCAGC 2 cut(s) 286, 876
BccI CCATC 7 cut(s) 391, 469, 790, 1094, 1099, 1202, 1482
BceAI ACGGC 2 cut(s) 785, 1525
BciT130I CCWGG 1 cut(s) 1537
BclI TGATCA 1 cut(s) 756
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 3 cut(s) 127, 374, 1102
BfaI CTAG 2 cut(s) 156, 1200
BfmI CTRYAG 3 cut(s) 84, 252, 1609
BfuAI ACCTGC 3 cut(s) 868, 978, 1404
BisI GCNGC 3 cut(s) 275, 816, 890
BlsI GCNGC 3 cut(s) 276, 817, 891
BmcAI AGTACT 1 cut(s) 362
Bme1390I CCNGG 2 cut(s) 164, 1537
Bme18I GGWCC 5 cut(s) 197, 327, 445, 947, 1416
BmeT110I CYCGRG 1 cut(s) 718
BmgT120I GGNCC 8 cut(s) 197, 327, 445, 455, 911, 947, 1268, 1416
BmiI GGNNCC 2 cut(s) 1269, 1534
BmrFI CCNGG 2 cut(s) 164, 1537
BmsI GCATC 6 cut(s) 222, 397, 523, 531, 1262, 1453
BpiI GAAGAC 1 cut(s) 690
BpmI CTGGAG 1 cut(s) 263
Bpu10I CCTNAGC 1 cut(s) 335
BpuEI CTTGAG 1 cut(s) 566
BpuMI CCSGG 1 cut(s) 164
BsaBI GATNNNNATC 2 cut(s) 71, 1085
BsaHI GRCGYC 1 cut(s) 214
BsaJI CCNNGG 4 cut(s) 801, 974, 1320, 1443
BsaWI WCCGGW 1 cut(s) 217
Bsc4I CCNNNNNNNGG 5 cut(s) 184, 336, 604, 698, 944
Bse118I RCCGGY 1 cut(s) 1133
Bse1I ACTGG 3 cut(s) 36, 1180, 1551
Bse21I CCTNAGG 1 cut(s) 527
Bse3DI GCAATG 2 cut(s) 1054, 1586
Bse8I GATNNNNATC 2 cut(s) 71, 1085
BseAI TCCGGA 1 cut(s) 217
BseBI CCWGG 1 cut(s) 1537
BseDI CCNNGG 4 cut(s) 801, 974, 1320, 1443
BseGI GGATG 4 cut(s) 399, 480, 1086, 1333
BseJI GATNNNNATC 2 cut(s) 71, 1085
BseLI CCNNNNNNNGG 5 cut(s) 184, 336, 604, 698, 944
BseMI GCAATG 2 cut(s) 1054, 1586
BseMII CTCAG 4 cut(s) 326, 917, 1220, 1617
BseNI ACTGG 3 cut(s) 36, 1180, 1551
BseRI GAGGAG 2 cut(s) 1091, 1337
BseSI GKGCMC 1 cut(s) 1440
BseXI GCAGC 2 cut(s) 286, 876
BseYI CCCAGC 1 cut(s) 598
Bsh1285I CGRYCG 1 cut(s) 195
BshFI GGCC 8 cut(s) 401, 456, 815, 912, 1133, 1244, 1270, 1540
BsiEI CGRYCG 1 cut(s) 195
BsiHKAI GWGCWC 2 cut(s) 99, 660
BsiHKCI CYCGRG 1 cut(s) 718
BsiSI CCGG 3 cut(s) 164, 218, 1134
BslFI GGGAC 2 cut(s) 122, 545
BslI CCNNNNNNNGG 5 cut(s) 184, 336, 604, 698, 944
BsmAI GTCTC 3 cut(s) 127, 374, 1102
BsmFI GGGAC 2 cut(s) 122, 545
BsnI GGCC 8 cut(s) 401, 456, 815, 912, 1133, 1244, 1270, 1540
BsoBI CYCGRG 1 cut(s) 718
Bsp1286I GDGCHC 3 cut(s) 99, 660, 1440
Bsp13I TCCGGA 1 cut(s) 217
Bsp143I GATC 6 cut(s) 55, 756, 1080, 1102, 1224, 1308
BspACI CCGC 5 cut(s) 191, 751, 816, 1064, 1137
BspANI GGCC 8 cut(s) 401, 456, 815, 912, 1133, 1244, 1270, 1540
BspCNI CTCAG 4 cut(s) 327, 918, 1221, 1616
BspEI TCCGGA 1 cut(s) 217
BspHI TCATGA 1 cut(s) 1359
BspLI GGNNCC 2 cut(s) 1269, 1534
BspMI ACCTGC 3 cut(s) 868, 978, 1404
BspPI GGATC 3 cut(s) 63, 1219, 1316
BspQI GCTCTTC 1 cut(s) 87
BsrDI GCAATG 2 cut(s) 1054, 1586
BsrFI RCCGGY 1 cut(s) 1133
BsrI ACTGG 3 cut(s) 36, 1180, 1551
BssAI RCCGGY 1 cut(s) 1133
BssECI CCNNGG 4 cut(s) 801, 974, 1320, 1443
BssMI GATC 6 cut(s) 55, 756, 1080, 1102, 1224, 1308
BssNI GRCGYC 1 cut(s) 214
BssT1I CCWWGG 2 cut(s) 974, 1443
Bst2UI CCWGG 1 cut(s) 1537
Bst4CI ACNGT 2 cut(s) 85, 1040
Bst6I CTCTTC 3 cut(s) 87, 927, 1367
BstACI GRCGYC 1 cut(s) 214
BstC8I GCNNGC 2 cut(s) 1135, 1593
BstDSI CCRYGG 1 cut(s) 801
BstF5I GGATG 4 cut(s) 399, 480, 1086, 1333
BstHHI GCGC 3 cut(s) 481, 514, 1617
BstKTI GATC 6 cut(s) 58, 759, 1083, 1105, 1227, 1311
BstMAI GTCTC 3 cut(s) 127, 374, 1102
BstMBI GATC 6 cut(s) 55, 756, 1080, 1102, 1224, 1308
BstMCI CGRYCG 1 cut(s) 195
BstMWI GCNNNNNNNGC 5 cut(s) 220, 280, 407, 518, 1250
BstNI CCWGG 1 cut(s) 1537
BstNSI RCATGY 1 cut(s) 691
BstSCI CCNGG 2 cut(s) 162, 1535
BstSFI CTRYAG 3 cut(s) 84, 252, 1609
BstSLI GKGCMC 1 cut(s) 1440
BstV1I GCAGC 2 cut(s) 286, 876
BstV2I GAAGAC 1 cut(s) 690
BstXI CCANNNNNNTGG 1 cut(s) 640
Bsu36I CCTNAGG 1 cut(s) 527
BsuRI GGCC 8 cut(s) 401, 456, 815, 912, 1133, 1244, 1270, 1540
BtgI CCRYGG 1 cut(s) 801
BtsCI GGATG 4 cut(s) 399, 480, 1086, 1333
BtsI GCAGTG 1 cut(s) 1557
BtsIMutI CAGTG 2 cut(s) 55, 1557
BveI ACCTGC 3 cut(s) 868, 978, 1404
Cac8I GCNNGC 2 cut(s) 1135, 1593
CciI TCATGA 1 cut(s) 1359
CfoI GCGC 3 cut(s) 481, 514, 1617
Cfr10I RCCGGY 1 cut(s) 1133
Cfr13I GGNCC 8 cut(s) 197, 327, 445, 455, 911, 947, 1268, 1416
CseI GACGC 1 cut(s) 203
Csp6I GTAC 4 cut(s) 172, 361, 748, 881
CviAII CATG 6 cut(s) 494, 518, 634, 688, 1360, 1408
CviQI GTAC 4 cut(s) 172, 361, 748, 881
DpnI GATC 6 cut(s) 57, 758, 1082, 1104, 1226, 1310
DpnII GATC 6 cut(s) 55, 756, 1080, 1102, 1224, 1308
EaeI YGGCCR 3 cut(s) 399, 1131, 1538
Eam1104I CTCTTC 3 cut(s) 87, 927, 1367
EarI CTCTTC 3 cut(s) 87, 927, 1367
EciI GGCGGA 1 cut(s) 1152
Ecl136II GAGCTC 2 cut(s) 97, 658
Eco130I CCWWGG 2 cut(s) 974, 1443
Eco24I GRGCYC 2 cut(s) 99, 660
Eco32I GATATC 1 cut(s) 963
Eco47I GGWCC 5 cut(s) 197, 327, 445, 947, 1416
Eco53kI GAGCTC 2 cut(s) 97, 658
Eco57I CTGAAG 2 cut(s) 31, 893
Eco81I CCTNAGG 1 cut(s) 527
Eco88I CYCGRG 1 cut(s) 718
EcoICRI GAGCTC 2 cut(s) 97, 658
EcoRII CCWGG 1 cut(s) 1535
EcoRV GATATC 1 cut(s) 963
EcoT14I CCWWGG 2 cut(s) 974, 1443
EcoT38I GRGCYC 2 cut(s) 99, 660
ErhI CCWWGG 2 cut(s) 974, 1443
FaeI CATG 6 cut(s) 497, 521, 637, 691, 1363, 1411
FalI AAGNNNNNCTT 4 cut(s) 451, 483, 609, 641
FaqI GGGAC 2 cut(s) 122, 545
FatI CATG 6 cut(s) 493, 517, 633, 687, 1359, 1407
FbaI TGATCA 1 cut(s) 756
Fnu4HI GCNGC 3 cut(s) 275, 816, 890
FokI GGATG 4 cut(s) 406, 487, 1073, 1340
FriOI GRGCYC 2 cut(s) 99, 660
Fsp4HI GCNGC 3 cut(s) 275, 816, 890
FspBI CTAG 2 cut(s) 156, 1200
GlaI GCGC 3 cut(s) 480, 513, 1616
GluI GCNGC 3 cut(s) 275, 816, 890
GsaI CCCAGC 1 cut(s) 602
GsuI CTGGAG 1 cut(s) 263
HaeIII GGCC 8 cut(s) 401, 456, 815, 912, 1133, 1244, 1270, 1540
HapII CCGG 3 cut(s) 164, 218, 1134
HgaI GACGC 1 cut(s) 203
HhaI GCGC 3 cut(s) 481, 514, 1617
Hin1I GRCGYC 1 cut(s) 214
Hin1II CATG 6 cut(s) 497, 521, 637, 691, 1363, 1411
Hin6I GCGC 3 cut(s) 479, 512, 1615
HinP1I GCGC 3 cut(s) 479, 512, 1615
HincII GTYRAC 2 cut(s) 313, 490
HindII GTYRAC 2 cut(s) 313, 490
HindIII AAGCTT 1 cut(s) 623
HinfI GANTC 4 cut(s) 67, 167, 340, 740
HpaII CCGG 3 cut(s) 164, 218, 1134
HphI GGTGA 7 cut(s) 76, 389, 550, 751, 1075, 1234, 1645
Hpy166II GTNNAC 3 cut(s) 174, 313, 490
Hpy188I TCNGA 8 cut(s) 77, 331, 787, 873, 927, 967, 1102, 1153
Hpy188III TCNNGA 8 cut(s) 218, 670, 718, 945, 1192, 1228, 1360, 1579
Hpy8I GTNNAC 3 cut(s) 174, 313, 490
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 4 cut(s) 446, 495, 823, 1004
HpyCH4III ACNGT 2 cut(s) 85, 1040
HpyCH4IV ACGT 1 cut(s) 135
HpyCH4V TGCA 5 cut(s) 235, 497, 521, 651, 1591
HpyF10VI GCNNNNNNNGC 5 cut(s) 220, 280, 407, 518, 1250
HpySE526I ACGT 1 cut(s) 135
Hsp92I GRCGYC 1 cut(s) 214
Hsp92II CATG 6 cut(s) 497, 521, 637, 691, 1363, 1411
HspAI GCGC 3 cut(s) 479, 512, 1615
Kpn2I TCCGGA 1 cut(s) 217
KroI GCCGGC 1 cut(s) 1133
KroNI GCCGGC 1 cut(s) 1135
Ksp22I TGATCA 1 cut(s) 756
Kzo9I GATC 6 cut(s) 55, 756, 1080, 1102, 1224, 1308
LguI GCTCTTC 1 cut(s) 87
LmnI GCTCC 4 cut(s) 220, 282, 600, 1575
Lsp1109I GCAGC 2 cut(s) 286, 876
LweI GCATC 6 cut(s) 222, 397, 523, 531, 1262, 1453
MaeI CTAG 2 cut(s) 156, 1200
MaeII ACGT 1 cut(s) 135
MaeIII GTNAC 4 cut(s) 158, 350, 703, 1542
MalI GATC 6 cut(s) 57, 758, 1082, 1104, 1226, 1310
MboI GATC 6 cut(s) 55, 756, 1080, 1102, 1224, 1308
MboII GAAGA 9 cut(s) 104, 459, 695, 914, 1043, 1081, 1384, 1394, 1510
MfeI CAATTG 1 cut(s) 317
MhlI GDGCHC 3 cut(s) 99, 660, 1440
MlsI TGGCCA 1 cut(s) 401
MluCI AATT 8 cut(s) 317, 713, 847, 853, 866, 933, 1140, 1146
MluNI TGGCCA 1 cut(s) 401
MlyI GAGTC 1 cut(s) 734
MmeI TCCRAC 4 cut(s) 37, 66, 585, 990
Mox20I TGGCCA 1 cut(s) 401
MroI TCCGGA 1 cut(s) 217
MroNI GCCGGC 1 cut(s) 1133
MscI TGGCCA 1 cut(s) 401
MseI TTAA 3 cut(s) 591, 846, 852
MslI CAYNNNNRTG 3 cut(s) 638, 1220, 1523
Msp20I TGGCCA 1 cut(s) 401
MspI CCGG 3 cut(s) 164, 218, 1134
MspR9I CCNGG 2 cut(s) 164, 1537
MunI CAATTG 1 cut(s) 317
MvaI CCWGG 1 cut(s) 1537
MwoI GCNNNNNNNGC 5 cut(s) 220, 280, 407, 518, 1250
NaeI GCCGGC 1 cut(s) 1135
NciI CCSGG 1 cut(s) 164
NdeII GATC 6 cut(s) 55, 756, 1080, 1102, 1224, 1308
NgoMIV GCCGGC 1 cut(s) 1133
NlaIII CATG 6 cut(s) 497, 521, 637, 691, 1363, 1411
NlaIV GGNNCC 2 cut(s) 1269, 1534
NmeAIII GCCGAG 1 cut(s) 802
NmuCI GTSAC 2 cut(s) 158, 703
NspI RCATGY 1 cut(s) 691
OliI CACNNNNGTG 2 cut(s) 1220, 1523
PaeR7I CTCGAG 1 cut(s) 718
PagI TCATGA 1 cut(s) 1359
PciSI GCTCTTC 1 cut(s) 87
PdiI GCCGGC 1 cut(s) 1135
PfeI GAWTC 3 cut(s) 67, 167, 340
PflFI GACNNNGTC 1 cut(s) 325
PflMI CCANNNNNTGG 1 cut(s) 944
PkrI GCNGC 3 cut(s) 276, 817, 891
PleI GAGTC 1 cut(s) 734
PpsI GAGTC 1 cut(s) 734
Psp124BI GAGCTC 2 cut(s) 99, 660
Psp6I CCWGG 1 cut(s) 1535
PspFI CCCAGC 1 cut(s) 598
PspGI CCWGG 1 cut(s) 1535
PspN4I GGNNCC 2 cut(s) 1269, 1534
PspPI GGNCC 8 cut(s) 197, 327, 445, 455, 911, 947, 1268, 1416
PsyI GACNNNGTC 1 cut(s) 325
RsaI GTAC 4 cut(s) 173, 362, 749, 882
RsaNI GTAC 4 cut(s) 172, 361, 748, 881
RseI CAYNNNNRTG 3 cut(s) 638, 1220, 1523
SacI GAGCTC 2 cut(s) 99, 660
SapI GCTCTTC 1 cut(s) 87
SaqAI TTAA 3 cut(s) 591, 846, 852
SatI GCNGC 3 cut(s) 275, 816, 890
Sau3AI GATC 6 cut(s) 55, 756, 1080, 1102, 1224, 1308
Sau96I GGNCC 8 cut(s) 197, 327, 445, 455, 911, 947, 1268, 1416
ScaI AGTACT 1 cut(s) 362
SchI GAGTC 1 cut(s) 734
ScrFI CCNGG 2 cut(s) 164, 1537
SduI GDGCHC 3 cut(s) 99, 660, 1440
SfaNI GCATC 6 cut(s) 222, 397, 523, 531, 1262, 1453
SfcI CTRYAG 3 cut(s) 84, 252, 1609
Sfr274I CTCGAG 1 cut(s) 718
SinI GGWCC 5 cut(s) 197, 327, 445, 947, 1416
SlaI CTCGAG 1 cut(s) 718
SmiMI CAYNNNNRTG 3 cut(s) 638, 1220, 1523
SmlI CTYRAG 2 cut(s) 545, 718
SmoI CTYRAG 2 cut(s) 545, 718
Sse9I AATT 8 cut(s) 317, 713, 847, 853, 866, 933, 1140, 1146
SsiI CCGC 5 cut(s) 191, 751, 816, 1064, 1137
SspI AATATT 1 cut(s) 21
SspMI CTAG 2 cut(s) 156, 1200
SstI GAGCTC 2 cut(s) 99, 660
StyD4I CCNGG 2 cut(s) 162, 1535
StyI CCWWGG 2 cut(s) 974, 1443
TaaI ACNGT 2 cut(s) 85, 1040
TaiI ACGT 1 cut(s) 138
TaqI TCGA 4 cut(s) 99, 719, 896, 1043
TaqII GACCGA 1 cut(s) 185
TasI AATT 8 cut(s) 317, 713, 847, 853, 866, 933, 1140, 1146
TatI WGTACW 1 cut(s) 360
TauI GCSGC 1 cut(s) 818
TfiI GAWTC 3 cut(s) 67, 167, 340
Tru1I TTAA 3 cut(s) 591, 846, 852
Tru9I TTAA 3 cut(s) 591, 846, 852
TscAI CASTG 2 cut(s) 55, 1564
TseFI GTSAC 2 cut(s) 158, 703
TseI GCWGC 2 cut(s) 274, 889
Tsp45I GTSAC 2 cut(s) 158, 703
TspDTI ATGAA 5 cut(s) 689, 1263, 1316, 1376, 1395
TspGWI ACGGA 1 cut(s) 898
TspRI CASTG 2 cut(s) 55, 1564
Tth111I GACNNNGTC 1 cut(s) 325
Van91I CCANNNNNTGG 1 cut(s) 944
VpaK11BI GGWCC 5 cut(s) 197, 327, 445, 947, 1416
XapI RAATTY 2 cut(s) 933, 1146
XceI RCATGY 1 cut(s) 691
XcmI CCANNNNNNNNNTGG 1 cut(s) 148
XhoI CTCGAG 1 cut(s) 718
XspI CTAG 2 cut(s) 156, 1200
ZrmI AGTACT 1 cut(s) 362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.