RLG00000019380

UPF0481 protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000833
Physical Location & Seq
Forward (+)
51201192 .. 51202853
1662 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019380

Sequence Viewer

Length: 1662 bp
ATGTCTTCTCTCCAACCAACATTCTCTTCCAAATCCAGTTCCAACTTCAATGAGCTTCAATGGGTGATTCAAATACGAAAAACTCTAGAGGAGGAGCTCGAAAATGATGGAGAAATCCCCGTCTCCATTTTCAACGTCCCCAAATCCCTCTTGGCTACCGACCCGGAATTGTACACCCCTCAACAGGTTGCGATTGGTCCTTACCACTATTGGCGTCCGGAGCTGTATGAGATGGAGAGGTACAAAGTGGCTGCGGCAAAACGAACGCGAAAGCAGCTCCAAACCCTCAAATTCCAGCACCTTGTTGACCAATTGATGAGTTTCGAGCCGAGGATTCGTGCTTGTTACCACAAGTACTTGGAGTTTAATGGTGAGACTTTGGGGTGGATGATGGTCATTGATGCTTCGTTTCTTCTCGAAATCCTTCGAGTCTATGCGGTCCAAGACGGGAAGACTTTGACGAGAGTTTCTTCAAGGATGGCGCATTTGGTTGATCATGCAGGGAGGAAGTCAGCGCATCATGCAATCCTTAGGGACTTGGTGATGCTTGAGAATCAAATCCCACTGTTTGTGTTGAGAAAAGTGTTGGAATTTCAGTTCCCAACGTTGGAATGCGCCGACCATATGCTTCTTTCCATGTTTATGGGATTGTGCAAAGAGCTCTCACCATTCAAGATGAAAGATGACGACTTGCAAAAGATCCAAGTCTCGAGTTGTTGTCACTTGCTGGACTTTTTGTACTACATGGTCACCCCCAAGTTAGAAGCTGGGCCGTCGGAAATCACAGAAGCCGAGGGTGGGGAGGCCACTAAATCATCAGATAACTCGAATTTCGTCAAACAATTTCTGGAAGAGGTATGGAAGCTGCTTTCGAAGTTGAATAAAGGTCCAATACGCCTGCTGACAAAAAATCTAATATCTGGACCTGTAAAGGTGATATCCAAACTGCCTTGGACTATCCTCTCCAACCTTCCTGGATTTGCAATTTTGAAAAAACCTCTCGAGTCCTTAGTTTCCTCTCAAGACAAAGAAGCAGTCAAACTCGAAGATGAAAATTCGAGCAGTGGCACTAGTAAACCGCCATTGATAGAGGAGATCACTATTCCATCTGTCTCTGATCTGTCAAAAGCCGGTGTCAAGTTCCTGCCCGCAAATAGCATTTCGAGCATCTCTTTCGATGCTAAGACTTGCTCATTTTACCTCCCCAGTACTAGCTTAGATGGGAACACAGAGGTGATCCTGAGAAACTTGGTGGCCTACGAAGCATCAATTGCATCGGGGCCGTTGGTTTTTACTCGCTACACCGAGTTGATGAATGGGATCATAGACACTGAGGAGGATGCCAAGTTGCTTAGAGGGAAAGGTATCATCTTGAACCATTTGAAGAGTGATGAAGAAGTGGCAAAACTGTTTAATGGCATGAGCAAGTCCATTAGATTGACCAAAGTGCCCTTCTTGGATAAGGCAATCGAAGATGCCAACAAGTATTACAATGGTAGATGGAAGGTGAAGACGAAGAAGTTTTTTAACATTTATGTGATTGGTTGCTGGAAAGTTCTGGCTTTGCTCGCTGCCATTTTGCTCCTGGTCTTGATGACAGTGCAAACATTTTGCCCAGGATACAACTGCAGTCGCATATATCAGATCAACACCACAACCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

554

Amino Acids

62.59

Weight (kDa)

8.18

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 43 - 531 4.5e-104 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 268
AccIII TCCGGA 1 cut(s) 217
AciI CCGC 4 cut(s) 254, 437, 1079, 1149
AclI AACGTT 1 cut(s) 605
AclWI GGATC 3 cut(s) 694, 1231, 1328
AcsI RAATTY 4 cut(s) 290, 590, 829, 1054
AcyI GRCGYC 1 cut(s) 214
AfaI GTAC 5 cut(s) 173, 242, 356, 740, 1210
AfiI CCNNNNNNNGG 3 cut(s) 184, 607, 798
AhlI ACTAGT 1 cut(s) 1070
AjnI CCWGG 3 cut(s) 973, 1584, 1615
AjuI GAANNNNNNNTTGG 4 cut(s) 10, 42, 1436, 1468
AleI CACNNNNGTG 1 cut(s) 1232
AloI GAACNNNNNNTCC 2 cut(s) 581, 613
AluBI AGCT 8 cut(s) 55, 97, 223, 277, 661, 767, 865, 1215
AluI AGCT 8 cut(s) 55, 97, 223, 277, 661, 767, 865, 1215
Alw21I GWGCWC 2 cut(s) 99, 663
Alw26I GTCTC 4 cut(s) 127, 368, 712, 1117
AlwI GGATC 3 cut(s) 694, 1231, 1328
Ama87I CYCGRG 2 cut(s) 709, 1001
Aor13HI TCCGGA 1 cut(s) 217
AoxI GGCC 4 cut(s) 770, 804, 1254, 1280
ApeKI GCWGC 4 cut(s) 251, 274, 865, 1571
ApoI RAATTY 4 cut(s) 290, 590, 829, 1054
ArsI GACNNNNNNTTYG 2 cut(s) 1020, 1052
Asp700I GAANNNNTTC 1 cut(s) 423
AspLEI GCGC 3 cut(s) 484, 517, 617
AspS9I GGNCC 6 cut(s) 197, 439, 770, 887, 923, 1280
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 8 cut(s) 76, 383, 553, 657, 742, 946, 1246, 1519
AsuII TTCGAA 1 cut(s) 872
AvaI CYCGRG 2 cut(s) 709, 1001
AvaII GGWCC 4 cut(s) 197, 439, 887, 923
AxyI CCTNAGG 1 cut(s) 530
BaeGI GKGCMC 1 cut(s) 1452
BanII GRGCYC 2 cut(s) 99, 663
BbsI GAAGAC 2 cut(s) 458, 1517
Bbv12I GWGCWC 2 cut(s) 99, 663
BbvI GCAGC 4 cut(s) 238, 286, 852, 1558
BccI CCATC 7 cut(s) 101, 226, 385, 472, 1114, 1214, 1494
BceAI ACGGC 2 cut(s) 757, 1267
BcgI CGANNNNNNTGC 2 cut(s) 1156, 1190
BciT130I CCWGG 3 cut(s) 975, 1586, 1617
BciVI GTATCC 1 cut(s) 1613
BclI TGATCA 1 cut(s) 493
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 4 cut(s) 127, 368, 712, 1117
BcuI ACTAGT 1 cut(s) 1070
BfaI CTAG 4 cut(s) 86, 1071, 1212, 1660
BfmI CTRYAG 1 cut(s) 1627
BfuI GTATCC 1 cut(s) 1613
BisI GCNGC 5 cut(s) 252, 255, 275, 866, 1572
BlsI GCNGC 5 cut(s) 253, 256, 276, 867, 1573
BmcAI AGTACT 2 cut(s) 356, 1210
Bme1390I CCNGG 4 cut(s) 164, 975, 1586, 1617
Bme18I GGWCC 4 cut(s) 197, 439, 887, 923
BmeT110I CYCGRG 2 cut(s) 709, 1001
BmgT120I GGNCC 6 cut(s) 197, 439, 770, 887, 923, 1280
BmiI GGNNCC 1 cut(s) 1281
BmrFI CCNGG 4 cut(s) 164, 975, 1586, 1617
BmrI ACTGGG 1 cut(s) 1200
BmsI GCATC 9 cut(s) 391, 526, 534, 1168, 1176, 1274, 1283, 1330, 1465
BmuI ACTGGG 1 cut(s) 1200
BpiI GAAGAC 2 cut(s) 458, 1517
Bpu14I TTCGAA 1 cut(s) 872
BpuEI CTTGAG 2 cut(s) 569, 1005
BpuMI CCSGG 1 cut(s) 164
BsaHI GRCGYC 1 cut(s) 214
BsaJI CCNNGG 4 cut(s) 329, 792, 950, 1615
BsaWI WCCGGW 1 cut(s) 217
Bsc4I CCNNNNNNNGG 3 cut(s) 184, 607, 798
Bse118I RCCGGY 1 cut(s) 1130
Bse1I ACTGG 2 cut(s) 36, 1206
Bse21I CCTNAGG 1 cut(s) 530
BseAI TCCGGA 1 cut(s) 217
BseBI CCWGG 3 cut(s) 975, 1586, 1617
BseDI CCNNGG 4 cut(s) 329, 792, 950, 1615
BseGI GGATG 3 cut(s) 393, 483, 1345
BseLI CCNNNNNNNGG 3 cut(s) 184, 607, 798
BseMII CTCAG 2 cut(s) 1232, 1323
BseNI ACTGG 2 cut(s) 36, 1206
BseRI GAGGAG 4 cut(s) 104, 107, 1106, 1349
BseSI GKGCMC 1 cut(s) 1452
BseXI GCAGC 4 cut(s) 238, 286, 852, 1558
BseYI CCCAGC 1 cut(s) 767
Bsh1236I CGCG 1 cut(s) 268
BshFI GGCC 4 cut(s) 772, 806, 1256, 1282
BsiHKAI GWGCWC 2 cut(s) 99, 663
BsiHKCI CYCGRG 2 cut(s) 709, 1001
BsiSI CCGG 3 cut(s) 164, 218, 1131
BslFI GGGAC 2 cut(s) 122, 548
BslI CCNNNNNNNGG 3 cut(s) 184, 607, 798
BsmAI GTCTC 4 cut(s) 127, 368, 712, 1117
BsmBI CGTCTC 1 cut(s) 127
BsmFI GGGAC 2 cut(s) 122, 548
BsmI GAATGC 1 cut(s) 617
BsnI GGCC 4 cut(s) 772, 806, 1256, 1282
BsoBI CYCGRG 2 cut(s) 709, 1001
Bsp119I TTCGAA 1 cut(s) 872
Bsp1286I GDGCHC 3 cut(s) 99, 663, 1452
Bsp13I TCCGGA 1 cut(s) 217
Bsp1407I TGTACA 1 cut(s) 171
Bsp143I GATC 7 cut(s) 493, 699, 1095, 1117, 1236, 1320, 1644
BspACI CCGC 4 cut(s) 254, 437, 1079, 1149
BspANI GGCC 4 cut(s) 772, 806, 1256, 1282
BspCNI CTCAG 2 cut(s) 1233, 1324
BspEI TCCGGA 1 cut(s) 217
BspFNI CGCG 1 cut(s) 268
BspLI GGNNCC 1 cut(s) 1281
BspMAI CTGCAG 1 cut(s) 1631
BspPI GGATC 3 cut(s) 694, 1231, 1328
BspT104I TTCGAA 1 cut(s) 872
BsrFI RCCGGY 1 cut(s) 1130
BsrGI TGTACA 1 cut(s) 171
BsrI ACTGG 2 cut(s) 36, 1206
BssAI RCCGGY 1 cut(s) 1130
BssECI CCNNGG 4 cut(s) 329, 792, 950, 1615
BssMI GATC 7 cut(s) 493, 699, 1095, 1117, 1236, 1320, 1644
BssNI GRCGYC 1 cut(s) 214
BssT1I CCWWGG 1 cut(s) 950
Bst2UI CCWGG 3 cut(s) 975, 1586, 1617
Bst4CI ACNGT 3 cut(s) 567, 1410, 1600
Bst6I CTCTTC 3 cut(s) 31, 846, 1379
BstACI GRCGYC 1 cut(s) 214
BstAPI GCANNNNNTGC 1 cut(s) 1271
BstAUI TGTACA 1 cut(s) 171
BstBI TTCGAA 1 cut(s) 872
BstC8I GCNNGC 3 cut(s) 899, 1149, 1569
BstDEI CTNAG 7 cut(s) 530, 1009, 1182, 1216, 1241, 1332, 1352
BstEII GGTNACC 1 cut(s) 748
BstF5I GGATG 3 cut(s) 393, 483, 1345
BstFNI CGCG 1 cut(s) 268
BstHHI GCGC 3 cut(s) 484, 517, 617
BstKTI GATC 7 cut(s) 496, 702, 1098, 1120, 1239, 1323, 1647
BstMAI GTCTC 4 cut(s) 127, 368, 712, 1117
BstMBI GATC 7 cut(s) 493, 699, 1095, 1117, 1236, 1320, 1644
BstMWI GCNNNNNNNGC 7 cut(s) 220, 274, 521, 1164, 1262, 1271, 1568
BstNI CCWGG 3 cut(s) 975, 1586, 1617
BstPI GGTNACC 1 cut(s) 748
BstSCI CCNGG 4 cut(s) 162, 973, 1584, 1615
BstSFI CTRYAG 1 cut(s) 1627
BstSLI GKGCMC 1 cut(s) 1452
BstUI CGCG 1 cut(s) 268
BstV1I GCAGC 4 cut(s) 238, 286, 852, 1558
BstV2I GAAGAC 2 cut(s) 458, 1517
BstX2I RGATCY 1 cut(s) 699
BstXI CCANNNNNNTGG 1 cut(s) 643
BstYI RGATCY 1 cut(s) 699
Bsu36I CCTNAGG 1 cut(s) 530
BsuI GTATCC 1 cut(s) 1613
BsuRI GGCC 4 cut(s) 772, 806, 1256, 1282
BtsCI GGATG 3 cut(s) 393, 483, 1345
BtsI GCAGTG 1 cut(s) 1069
BtsIMutI CAGTG 4 cut(s) 563, 1069, 1329, 1605
Cac8I GCNNGC 3 cut(s) 899, 1149, 1569
CfoI GCGC 3 cut(s) 484, 517, 617
Cfr10I RCCGGY 1 cut(s) 1130
Cfr13I GGNCC 6 cut(s) 197, 439, 770, 887, 923, 1280
CseI GACGC 1 cut(s) 203
Csp6I GTAC 5 cut(s) 172, 241, 355, 739, 1209
CviAII CATG 5 cut(s) 497, 521, 637, 745, 1420
CviQI GTAC 5 cut(s) 172, 241, 355, 739, 1209
DdeI CTNAG 7 cut(s) 530, 1009, 1182, 1216, 1241, 1332, 1352
DpnI GATC 7 cut(s) 495, 701, 1097, 1119, 1238, 1322, 1646
DpnII GATC 7 cut(s) 493, 699, 1095, 1117, 1236, 1320, 1644
Eam1104I CTCTTC 3 cut(s) 31, 846, 1379
EarI CTCTTC 3 cut(s) 31, 846, 1379
Ecl136II GAGCTC 2 cut(s) 97, 661
Eco130I CCWWGG 1 cut(s) 950
Eco24I GRGCYC 2 cut(s) 99, 663
Eco32I GATATC 1 cut(s) 939
Eco47I GGWCC 4 cut(s) 197, 439, 887, 923
Eco53kI GAGCTC 2 cut(s) 97, 661
Eco81I CCTNAGG 1 cut(s) 530
Eco88I CYCGRG 2 cut(s) 709, 1001
Eco91I GGTNACC 1 cut(s) 748
EcoICRI GAGCTC 2 cut(s) 97, 661
EcoO65I GGTNACC 1 cut(s) 748
EcoRII CCWGG 3 cut(s) 973, 1584, 1615
EcoRV GATATC 1 cut(s) 939
EcoT14I CCWWGG 1 cut(s) 950
EcoT38I GRGCYC 2 cut(s) 99, 663
ErhI CCWWGG 1 cut(s) 950
Esp3I CGTCTC 1 cut(s) 127
FaeI CATG 5 cut(s) 500, 524, 640, 748, 1423
FaqI GGGAC 2 cut(s) 122, 548
FatI CATG 5 cut(s) 496, 520, 636, 744, 1419
FauI CCCGC 1 cut(s) 1156
FauNDI CATATG 1 cut(s) 624
FbaI TGATCA 1 cut(s) 493
Fnu4HI GCNGC 5 cut(s) 252, 255, 275, 866, 1572
FokI GGATG 3 cut(s) 400, 490, 1352
FriOI GRGCYC 2 cut(s) 99, 663
Fsp4HI GCNGC 5 cut(s) 252, 255, 275, 866, 1572
FspBI CTAG 4 cut(s) 86, 1071, 1212, 1660
GlaI GCGC 3 cut(s) 483, 516, 616
GluI GCNGC 5 cut(s) 252, 255, 275, 866, 1572
GsaI CCCAGC 1 cut(s) 771
HaeIII GGCC 4 cut(s) 772, 806, 1256, 1282
HapII CCGG 3 cut(s) 164, 218, 1131
HgaI GACGC 1 cut(s) 203
HhaI GCGC 3 cut(s) 484, 517, 617
Hin1I GRCGYC 1 cut(s) 214
Hin1II CATG 5 cut(s) 500, 524, 640, 748, 1423
Hin6I GCGC 3 cut(s) 482, 515, 615
HinP1I GCGC 3 cut(s) 482, 515, 615
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 5 cut(s) 67, 334, 429, 553, 1004
HpaII CCGG 3 cut(s) 164, 218, 1131
HphI GGTGA 8 cut(s) 76, 383, 553, 657, 742, 946, 1246, 1519
Hpy166II GTNNAC 3 cut(s) 174, 307, 1076
Hpy188I TCNGA 4 cut(s) 778, 820, 1117, 1644
Hpy8I GTNNAC 3 cut(s) 174, 307, 1076
Hpy99I CGWCG 1 cut(s) 778
HpyAV CCTTC 4 cut(s) 434, 980, 1462, 1498
HpyCH4III ACNGT 3 cut(s) 567, 1410, 1600
HpyCH4IV ACGT 2 cut(s) 135, 605
HpyCH4V TGCA 8 cut(s) 500, 524, 654, 694, 983, 1274, 1603, 1629
HpyF10VI GCNNNNNNNGC 7 cut(s) 220, 274, 521, 1164, 1262, 1271, 1568
HpyF3I CTNAG 7 cut(s) 530, 1009, 1182, 1216, 1241, 1332, 1352
HpySE526I ACGT 2 cut(s) 135, 605
Hsp92I GRCGYC 1 cut(s) 214
Hsp92II CATG 5 cut(s) 500, 524, 640, 748, 1423
HspAI GCGC 3 cut(s) 482, 515, 615
Kpn2I TCCGGA 1 cut(s) 217
Ksp22I TGATCA 1 cut(s) 493
Kzo9I GATC 7 cut(s) 493, 699, 1095, 1117, 1236, 1320, 1644
LmnI GCTCC 4 cut(s) 94, 220, 282, 1587
Lsp1109I GCAGC 4 cut(s) 238, 286, 852, 1558
LweI GCATC 9 cut(s) 391, 526, 534, 1168, 1176, 1274, 1283, 1330, 1465
MaeI CTAG 4 cut(s) 86, 1071, 1212, 1660
MaeII ACGT 2 cut(s) 135, 605
MaeIII GTNAC 3 cut(s) 344, 719, 748
MalI GATC 7 cut(s) 495, 701, 1097, 1119, 1238, 1322, 1646
MboI GATC 7 cut(s) 493, 699, 1095, 1117, 1236, 1320, 1644
MfeI CAATTG 2 cut(s) 311, 1269
MflI RGATCY 1 cut(s) 699
MhlI GDGCHC 3 cut(s) 99, 663, 1452
MluCI AATT 9 cut(s) 167, 290, 311, 590, 829, 842, 984, 1054, 1269
MlyI GAGTC 2 cut(s) 438, 1013
MmeI TCCRAC 6 cut(s) 37, 66, 567, 588, 756, 990
MroI TCCGGA 1 cut(s) 217
MroXI GAANNNNTTC 1 cut(s) 423
MseI TTAA 3 cut(s) 366, 1413, 1527
MslI CAYNNNNRTG 3 cut(s) 641, 1232, 1535
MspI CCGG 3 cut(s) 164, 218, 1131
MspR9I CCNGG 4 cut(s) 164, 975, 1586, 1617
MunI CAATTG 2 cut(s) 311, 1269
Mva1269I GAATGC 1 cut(s) 617
MvaI CCWGG 3 cut(s) 975, 1586, 1617
MvnI CGCG 1 cut(s) 268
MwoI GCNNNNNNNGC 7 cut(s) 220, 274, 521, 1164, 1262, 1271, 1568
NciI CCSGG 1 cut(s) 164
NdeI CATATG 1 cut(s) 624
NdeII GATC 7 cut(s) 493, 699, 1095, 1117, 1236, 1320, 1644
NlaIII CATG 5 cut(s) 500, 524, 640, 748, 1423
NlaIV GGNNCC 1 cut(s) 1281
NmeAIII GCCGAG 2 cut(s) 354, 817
NmuCI GTSAC 2 cut(s) 719, 748
NspV TTCGAA 1 cut(s) 872
OliI CACNNNNGTG 1 cut(s) 1232
PaeR7I CTCGAG 2 cut(s) 709, 1001
PctI GAATGC 1 cut(s) 617
PdmI GAANNNNTTC 1 cut(s) 423
PfeI GAWTC 3 cut(s) 67, 334, 553
PfoI TCCNGGA 1 cut(s) 973
PkrI GCNGC 5 cut(s) 253, 256, 276, 867, 1573
PleI GAGTC 2 cut(s) 437, 1012
PpsI GAGTC 2 cut(s) 437, 1012
Psp124BI GAGCTC 2 cut(s) 99, 663
Psp1406I AACGTT 1 cut(s) 605
Psp6I CCWGG 3 cut(s) 973, 1584, 1615
PspEI GGTNACC 1 cut(s) 748
PspFI CCCAGC 1 cut(s) 767
PspGI CCWGG 3 cut(s) 973, 1584, 1615
PspN4I GGNNCC 1 cut(s) 1281
PspPI GGNCC 6 cut(s) 197, 439, 770, 887, 923, 1280
PstI CTGCAG 1 cut(s) 1631
PsuI RGATCY 1 cut(s) 699
RsaI GTAC 5 cut(s) 173, 242, 356, 740, 1210
RsaNI GTAC 5 cut(s) 172, 241, 355, 739, 1209
RseI CAYNNNNRTG 3 cut(s) 641, 1232, 1535
SacI GAGCTC 2 cut(s) 99, 663
SaqAI TTAA 3 cut(s) 366, 1413, 1527
SatI GCNGC 5 cut(s) 252, 255, 275, 866, 1572
Sau3AI GATC 7 cut(s) 493, 699, 1095, 1117, 1236, 1320, 1644
Sau96I GGNCC 6 cut(s) 197, 439, 770, 887, 923, 1280
ScaI AGTACT 2 cut(s) 356, 1210
SchI GAGTC 2 cut(s) 438, 1013
ScrFI CCNGG 4 cut(s) 164, 975, 1586, 1617
SduI GDGCHC 3 cut(s) 99, 663, 1452
SfaNI GCATC 9 cut(s) 391, 526, 534, 1168, 1176, 1274, 1283, 1330, 1465
SfcI CTRYAG 1 cut(s) 1627
Sfr274I CTCGAG 2 cut(s) 709, 1001
SfuI TTCGAA 1 cut(s) 872
SinI GGWCC 4 cut(s) 197, 439, 887, 923
SlaI CTCGAG 2 cut(s) 709, 1001
SmiMI CAYNNNNRTG 3 cut(s) 641, 1232, 1535
SmlI CTYRAG 4 cut(s) 548, 709, 1001, 1020
SmoI CTYRAG 4 cut(s) 548, 709, 1001, 1020
SpeI ACTAGT 1 cut(s) 1070
Sse9I AATT 9 cut(s) 167, 290, 311, 590, 829, 842, 984, 1054, 1269
SsiI CCGC 4 cut(s) 254, 437, 1079, 1149
SspMI CTAG 4 cut(s) 86, 1071, 1212, 1660
SstI GAGCTC 2 cut(s) 99, 663
StyD4I CCNGG 4 cut(s) 162, 973, 1584, 1615
StyI CCWWGG 1 cut(s) 950
TaaI ACNGT 3 cut(s) 567, 1410, 1600
TaiI ACGT 2 cut(s) 138, 608
TasI AATT 9 cut(s) 167, 290, 311, 590, 829, 842, 984, 1054, 1269
TatI WGTACW 4 cut(s) 171, 354, 738, 1208
TauI GCSGC 1 cut(s) 257
TfiI GAWTC 3 cut(s) 67, 334, 553
Tru1I TTAA 3 cut(s) 366, 1413, 1527
Tru9I TTAA 3 cut(s) 366, 1413, 1527
TscAI CASTG 4 cut(s) 570, 1069, 1336, 1605
TseFI GTSAC 2 cut(s) 719, 748
TseI GCWGC 4 cut(s) 251, 274, 865, 1571
Tsp45I GTSAC 2 cut(s) 719, 748
TspDTI ATGAA 4 cut(s) 692, 1065, 1328, 1407
TspRI CASTG 4 cut(s) 570, 1069, 1336, 1605
VpaK11BI GGWCC 4 cut(s) 197, 439, 887, 923
XapI RAATTY 4 cut(s) 290, 590, 829, 1054
XbaI TCTAGA 1 cut(s) 85
XcmI CCANNNNNNNNNTGG 2 cut(s) 148, 1582
XhoI CTCGAG 2 cut(s) 709, 1001
XmnI GAANNNNTTC 1 cut(s) 423
XspI CTAG 4 cut(s) 86, 1071, 1212, 1660
ZrmI AGTACT 2 cut(s) 356, 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.