Prupe.1G021500_v2.0.a1

Early light-induced protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
1496853 .. 1498070
1218 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G021500.1

Sequence Viewer

Length: 570 bp
ATGGCAGCATCATCTTCCATGCAATCAATATTCCTAGCTAATAACTCGGTGGCTTATGGAGCCGGAAATAACAAATCAGTTGGTCCATTTTCAGTGCCTGCTCTGCATAGGTACCCTAACATGAGGGTACGCTCAATGGTCAAGGATGGTAAGAAGGAGCAACCATCTACAGTAACAAATGCATCAAAAAATCCACCACCATCTAATACACCTTTTCCTTCAAAGGTTAGCACAAAAATTTCGGACTTGCTTGCATTCAGTGGGCCAGCCCCGGAGAGAATCAACGGCAGGCTTGCAATGGTGGGGTTTGTTTCAGCCCTCGCAGTGGAGCTATTCAAAGGACAGGATGTGTTTGCCCAGATATCCGACGGTGGATTCTCGTTGTTCGTTGGCACTAGTATTTTGCTGTCAGTGGCATCTTTGATTCCTTTGTTTAAAGGCGTGAGCGTGGAGTCGAAATCAGATGGGATAATGACGTCCGATGCTGAGTTGTTGAATGGAAGGTTGGCCATGTTAGGTCTGGTAGCTTTGGCCTTCACTGAATATGTGACGGGAGGGACTCTAGTTTAG

Protein Analysis

190

Amino Acids

19.75

Weight (kDa)

9.47

Isoelectric Point (pI)

25.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000396)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G22840 AT4G14690
fragaria_vesca FvH4_2g20400 FvH4_2g20420 FvH4_2g20430 FvH4_4g01290 FvH4_4g01310 FvH4_5g09070
malus_domestica MD06G1134100.v1.1 MD13G1200100.v1.1 MD13G1200300.v1.1 MD13G1200600.v1.1 MD14G1150400.v1.1 MD16G1200000.v1.1
prunus_persica Prupe.1G021400_v2.0.a1 Prupe.1G021500_v2.0.a1 Prupe.1G021600_v2.0.a1 Prupe.1G021700_v2.0.a1 Prupe.1G021800_v2.0.a1
pyrus_communis pycom13g17350 pycom13g17370 pycom13g17400 pycom13g17410 pycom16g16870
rosa_chinensis RchiOBHm_Chr4g0387791 RchiOBHm_Chr4g0387801 RchiOBHm_Chr6g0286501 RchiOBHm_Chr6g0286511 RchiOBHm_Chr6g0286521 RchiOBHm_Chr6g0286531 RchiOBHm_Chr7g0189141
rosa_laevigata RLG00000004629 RLG00000010094 RLG00000010095 RLG00000012561 RLG00000012563 RLG00000012564
rosa_multiflora Rmu_co8365229.1_g000001 Rmu_sc0004628.1_g000001 Rmu_sc0004628.1_g000002 Rmu_sc0004816.1_g000003 Rmu_sc0004816.1_g000004 Rmu_sc0004816.1_g000005 Rmu_sc0004816.1_g000010 Rmu_sc0008916.1_g000002 Rmu_sc0013958.1_g000002
rosa_roxburghii Rroxscaffold_3G00265750 Rroxscaffold_5G00334410 Rroxscaffold_5G00334420 Rroxscaffold_7G00182230 Rroxscaffold_7G00182240 Rroxscaffold_7G00182250 Rroxscaffold_7G00182270
rosa_rugosa Rorug03G0313400 Rorug03G0313600 Rorug06G0180400 Rorug06G0180500 Rorug06G0180600 Rorug06G0496200
rosa_samantha Rh4AG018400 Rh4AG018500 Rh4BG013400 Rh4BG013500 Rh4CG019600 Rh4CG019700 Rh4DG014200 Rh4DG014300 Rh6AG292700 Rh6AG292800 Rh6AG292900 Rh6AG293300 Rh6AG293400 Rh6AG293500 Rh6BG296200 Rh6BG296300 Rh6BG296500 Rh6BG296600 Rh6BG296700 Rh6BG296800 Rh6BG296900 Rh6CG296800 Rh6CG297000 Rh6CG297100 Rh6CG297200 Rh6DG288700 Rh6DG288800 Rh6DG289000 Rh6DG289100 Rh7AG101000 Rh7BG103600 Rh7CG105000 Rh7CG457500 Rh7DG102900
rosa_wichuraiana Rw4G001210 Rw6G025230 Rw6G025240 Rw6G025250 Rw6G025260 Rw6G025270 Rw6G025540 Rw7G008720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 479
Acc65I GGTACC 1 cut(s) 111
AccB1I GGYRCC 1 cut(s) 111
AcoI YGGCCR 1 cut(s) 507
AcsI RAATTY 1 cut(s) 237
AcyI GRCGYC 1 cut(s) 476
AfaI GTAC 2 cut(s) 113, 129
AfiI CCNNNNNNNGG 1 cut(s) 325
AgsI TTSAA 3 cut(s) 222, 337, 496
AhlI ACTAGT 1 cut(s) 395
AjuI GAANNNNNNNTTGG 2 cut(s) 488, 520
AluBI AGCT 3 cut(s) 38, 331, 527
AluI AGCT 3 cut(s) 38, 331, 527
AlwNI CAGNNNCTG 1 cut(s) 98
AoxI GGCC 3 cut(s) 263, 507, 531
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 237
Asp718I GGTACC 1 cut(s) 111
AspS9I GGNCC 2 cut(s) 83, 263
AsuC2I CCSGG 1 cut(s) 272
AvaII GGWCC 1 cut(s) 83
BalI TGGCCA 1 cut(s) 509
BanI GGYRCC 1 cut(s) 111
BbvI GCAGC 1 cut(s) 17
BccI CCATC 4 cut(s) 140, 172, 208, 458
BceAI ACGGC 1 cut(s) 301
BcnI CCSGG 1 cut(s) 272
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 3 cut(s) 35, 396, 563
BfmI CTRYAG 1 cut(s) 168
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
Bme1390I CCNGG 1 cut(s) 272
Bme18I GGWCC 1 cut(s) 83
BmgT120I GGNCC 2 cut(s) 83, 263
BmiI GGNNCC 2 cut(s) 61, 113
BmrFI CCNGG 1 cut(s) 272
BmsI GCATC 4 cut(s) 17, 191, 425, 472
BpuMI CCSGG 1 cut(s) 272
BsaHI GRCGYC 1 cut(s) 476
BsaJI CCNNGG 1 cut(s) 270
Bsc4I CCNNNNNNNGG 1 cut(s) 325
Bse3DI GCAATG 1 cut(s) 303
BseDI CCNNGG 1 cut(s) 270
BseGI GGATG 2 cut(s) 151, 352
BseLI CCNNNNNNNGG 1 cut(s) 325
BseMI GCAATG 1 cut(s) 303
BseMII CTCAG 1 cut(s) 477
BseXI GCAGC 1 cut(s) 17
BshFI GGCC 3 cut(s) 265, 509, 533
BshNI GGYRCC 1 cut(s) 111
BsiSI CCGG 2 cut(s) 63, 272
BslI CCNNNNNNNGG 1 cut(s) 325
BsmI GAATGC 1 cut(s) 254
BsnI GGCC 3 cut(s) 265, 509, 533
BspANI GGCC 3 cut(s) 265, 509, 533
BspCNI CTCAG 1 cut(s) 478
BspLI GGNNCC 2 cut(s) 61, 113
BspT107I GGYRCC 1 cut(s) 111
BsrDI GCAATG 1 cut(s) 303
BssECI CCNNGG 1 cut(s) 270
BssNI GRCGYC 1 cut(s) 476
Bst4CI ACNGT 2 cut(s) 172, 371
BstACI GRCGYC 1 cut(s) 476
BstC8I GCNNGC 5 cut(s) 99, 252, 267, 290, 294
BstDEI CTNAG 1 cut(s) 486
BstF5I GGATG 2 cut(s) 151, 352
BstMWI GCNNNNNNNGC 2 cut(s) 59, 103
BstSCI CCNGG 1 cut(s) 270
BstSFI CTRYAG 1 cut(s) 168
BstV1I GCAGC 1 cut(s) 17
BsuRI GGCC 3 cut(s) 265, 509, 533
BtsCI GGATG 2 cut(s) 151, 352
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 5 cut(s) 99, 265, 330, 417, 537
Cac8I GCNNGC 5 cut(s) 99, 252, 267, 290, 294
CaiI CAGNNNCTG 1 cut(s) 98
Cfr13I GGNCC 2 cut(s) 83, 263
Csp6I GTAC 2 cut(s) 112, 128
CviAII CATG 3 cut(s) 19, 121, 511
CviQI GTAC 2 cut(s) 112, 128
DdeI CTNAG 1 cut(s) 486
DraI TTTAAA 1 cut(s) 436
EaeI YGGCCR 1 cut(s) 507
Eco32I GATATC 1 cut(s) 363
Eco47I GGWCC 1 cut(s) 83
EcoRV GATATC 1 cut(s) 363
EcoT22I ATGCAT 1 cut(s) 184
FaeI CATG 3 cut(s) 22, 124, 514
FaiI YATR 6 cut(s) 20, 57, 108, 122, 512, 546
FatI CATG 3 cut(s) 18, 120, 510
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 2 cut(s) 158, 359
Fsp4HI GCNGC 1 cut(s) 6
FspBI CTAG 3 cut(s) 35, 396, 563
GluI GCNGC 1 cut(s) 6
HaeIII GGCC 3 cut(s) 265, 509, 533
HapII CCGG 2 cut(s) 63, 272
Hin1I GRCGYC 1 cut(s) 476
Hin1II CATG 3 cut(s) 22, 124, 514
HinfI GANTC 5 cut(s) 279, 375, 424, 452, 559
HpaII CCGG 2 cut(s) 63, 272
Hpy188I TCNGA 4 cut(s) 244, 367, 463, 481
Hpy99I CGWCG 1 cut(s) 371
HpyAV CCTTC 4 cut(s) 148, 228, 495, 544
HpyCH4III ACNGT 2 cut(s) 172, 371
HpyCH4IV ACGT 1 cut(s) 476
HpyCH4V TGCA 5 cut(s) 22, 106, 182, 254, 296
HpyF10VI GCNNNNNNNGC 2 cut(s) 59, 103
HpyF3I CTNAG 1 cut(s) 486
HpySE526I ACGT 1 cut(s) 476
Hsp92I GRCGYC 1 cut(s) 476
Hsp92II CATG 3 cut(s) 22, 124, 514
KpnI GGTACC 1 cut(s) 115
LmnI GCTCC 3 cut(s) 59, 157, 328
LpnPI CCDG 8 cut(s) 76, 111, 274, 279, 285, 329, 371, 506
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 4 cut(s) 17, 191, 425, 472
MaeI CTAG 3 cut(s) 35, 396, 563
MaeII ACGT 1 cut(s) 476
MaeIII GTNAC 2 cut(s) 172, 547
MboII GAAGA 1 cut(s) 6
MlsI TGGCCA 1 cut(s) 509
MluCI AATT 1 cut(s) 237
MluNI TGGCCA 1 cut(s) 509
MlyI GAGTC 2 cut(s) 461, 553
MmeI TCCRAC 1 cut(s) 390
MnlI CCTC 3 cut(s) 117, 329, 548
Mox20I TGGCCA 1 cut(s) 509
Mph1103I ATGCAT 1 cut(s) 184
MscI TGGCCA 1 cut(s) 509
MseI TTAA 1 cut(s) 435
Msp20I TGGCCA 1 cut(s) 509
MspI CCGG 2 cut(s) 63, 272
MspR9I CCNGG 1 cut(s) 272
Mva1269I GAATGC 1 cut(s) 254
MwoI GCNNNNNNNGC 2 cut(s) 59, 103
NciI CCSGG 1 cut(s) 272
NlaIII CATG 3 cut(s) 22, 124, 514
NlaIV GGNNCC 2 cut(s) 61, 113
NmuCI GTSAC 1 cut(s) 547
NsiI ATGCAT 1 cut(s) 184
PctI GAATGC 1 cut(s) 254
PfeI GAWTC 3 cut(s) 279, 375, 424
PkrI GCNGC 1 cut(s) 7
PleI GAGTC 2 cut(s) 460, 553
PpsI GAGTC 2 cut(s) 460, 553
PspN4I GGNNCC 2 cut(s) 61, 113
PspPI GGNCC 2 cut(s) 83, 263
PstNI CAGNNNCTG 1 cut(s) 98
RsaI GTAC 2 cut(s) 113, 129
RsaNI GTAC 2 cut(s) 112, 128
SaqAI TTAA 1 cut(s) 435
SatI GCNGC 1 cut(s) 6
Sau96I GGNCC 2 cut(s) 83, 263
SchI GAGTC 2 cut(s) 461, 553
ScrFI CCNGG 1 cut(s) 272
SetI ASST 9 cut(s) 40, 113, 214, 228, 333, 479, 506, 520, 529
SfaNI GCATC 4 cut(s) 17, 191, 425, 472
SfcI CTRYAG 1 cut(s) 168
SinI GGWCC 1 cut(s) 83
SpeI ACTAGT 1 cut(s) 395
Sse9I AATT 1 cut(s) 237
SspI AATATT 1 cut(s) 30
SspMI CTAG 3 cut(s) 35, 396, 563
StyD4I CCNGG 1 cut(s) 270
TaaI ACNGT 2 cut(s) 172, 371
TaiI ACGT 1 cut(s) 479
TaqI TCGA 1 cut(s) 455
TasI AATT 1 cut(s) 237
TfiI GAWTC 3 cut(s) 279, 375, 424
Tru1I TTAA 1 cut(s) 435
Tru9I TTAA 1 cut(s) 435
TscAI CASTG 5 cut(s) 99, 265, 330, 417, 544
TseFI GTSAC 1 cut(s) 547
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 547
TspRI CASTG 5 cut(s) 99, 265, 330, 417, 544
VpaK11BI GGWCC 1 cut(s) 83
XapI RAATTY 1 cut(s) 237
XcmI CCANNNNNNNNNTGG 1 cut(s) 517
XspI CTAG 3 cut(s) 35, 396, 563
ZraI GACGTC 1 cut(s) 477
Zsp2I ATGCAT 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.