Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000396

Physical Location & Seq

Genomic Coordinates Reverse (-)

33573012 .. 33577834

Gene Structure 4823 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0313600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGTCGAAACTCCAAAAAGAAGAGAAAGAAGCAGAGGAGGTGGCCGCTCGGCCTCCGCCTTCTGCTCCGTCGCCGGCGACGAGTGCGACTCTGAGTGACTCAACGAAATCAAAAGAAGGATCTGCAACCTATGACAAGAGCGAGAGTGCCGAATTGGCGAAGAAAGGTTCATATTCGCTGGAGAAGTGTATGGATATGTGCGCGACACCGCCGGTGAAACAGCAGAGGCACGACGAAGCTCCAGATAGCGCACCGAAGAAGACGACGTCGCATCAAATTTTGGAGGAATCTGCGAAGGAATCTTCGGCGGTTATGGTGGAAGAGGCCTGGGGGAGACTGAAGAAGTCCTTCGTTTACTACAGAGGCAAGCCGGTGGCGATTCTTGCTGCTACGGATCCAATGGCGGAGGCTTTGAATTACAATCAGGTATCCGTGAGAGATTTTGTTCCTAGTGGCTTGGCCTGCCTCATGAAGGATCCAGTAGTGCCAGAGATAGTAAAGAACTCTCTCCTAAAGACCCTGCACCTCCAAGGTCGGGAGAAAATGGTTGGTAACTTTACACTTGGAGAAGAAGGTGTTCTTCCTGCGACCTCTAAGGTCTCATATGATTCTTTATCTGCTCAAGATACTGTGCGACTTTGCAGAGCGGGGGGTGCTGGTGGAATTGGGGATGAGGGCGGCCATGATGAACTTGATGAGAGTGAGGGTGATGGGAGTGAGAGTGAAGAAGAAGAAGTTGAAGGAGACGAGCAAGAAGAGGATATTGATGATGTTGAAGGTGGGCACGGCCGTGTGGTTCCTGTACGTTGGCTTATTAGAAATGGAGAAGTGTATGAAGCTCTGATTATTGACCATGTGCGTCCAGATGATTATGCTGATGTCTTCCAATTTTATCAGATGATCCTACAGATTATGGAGGAGAATATACATGAAAATGAGATAGTGCATTATAAAATTAGAATGCCTTATGAACCTTACTACACCATCCCCAGGGCAGAGGAGTTGCTTCGAATATTTCGAGTACAGGGTAATATTGCTGATGCAGAAGAAATTGGAGATTGTTATAATGATATCCTTGCTGATCTTTATCCCTCAAGGAATGCTCTCCACTTTGATGTGCTTGATGCAATACATAGTTGCTGGGTACTCAACTCTCAAAATCCCCTGCCACAAGGGTATAGAGTTTTTTATGTCACAGCTCTCCCTAATGGGGATGGAGATGAGGATGTGGATGTTGGTGAGGATGACAATGTGCATGGGGATGAGGATTGGAGGGAGCTAGGCCTAAACATTCCTTTCCAGTTGTTTCTTCAGATTCTCATCAGGGTCTATGTGTTCGACGATGGAGATGGTGCTAATATACCACTATTTCATGTTGGAGGAATTATGGCGACCCCATTCTTGCTTTCCAAAGATAAGATTGAACTTCAGTTTGCCACAAACCATATAGGGCCTGTTAATGTGCTCGGTAGAGTTGTGCTTAAAAATGTTCAGCAGGGAGTAGCAACAGCTTGCTATGTGGCACTGCATCCGCAAGCTAAAGGGGTGAGCGGTGAATATTTTTCAGATAGTAATATTTCCAAGCCAAGATTGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006950 GO:0008150 GO:0009266 GO:0009314 GO:0009408 GO:0009409 GO:0009411 GO:0009416 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009637 GO:0009639 GO:0009642 GO:0009644 GO:0009889 GO:0009987 GO:0010029 GO:0010030 GO:0010114 GO:0010117 GO:0010218 GO:0010224 GO:0010380 GO:0016020 GO:0019222 GO:0031323 GO:0031326 GO:0031976 GO:0031984 GO:0033554 GO:0034357 GO:0034605 GO:0034644 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048518 GO:0048580 GO:0048582 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051179 GO:0051193 GO:0051234 GO:0051239 GO:0051240 GO:0051716 GO:0055035 GO:0055085 GO:0065007 GO:0070141 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071484 GO:0071486 GO:0071489 GO:0071490 GO:0071491 GO:0071492 GO:0080167 GO:0090056 GO:0104004 GO:1900140 GO:1901401 GO:1901463 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Chloroa_b-bind

Protein Analysis

532

Amino Acids

58.84

Weight (kDa)

4.61

Isoelectric Point (pI)

54.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_100	PF12899	109 - 203	1.8e-20	Alkaline and neutral invertase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000396)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22840 AT4G14690
fragaria_vesca	FvH4_2g20400 FvH4_2g20420 FvH4_2g20430 FvH4_4g01290 FvH4_4g01310 FvH4_5g09070
malus_domestica	MD06G1134100.v1.1 MD13G1200100.v1.1 MD13G1200300.v1.1 MD13G1200600.v1.1 MD14G1150400.v1.1 MD16G1200000.v1.1
prunus_persica	Prupe.1G021400_v2.0.a1 Prupe.1G021500_v2.0.a1 Prupe.1G021600_v2.0.a1 Prupe.1G021700_v2.0.a1 Prupe.1G021800_v2.0.a1
pyrus_communis	pycom13g17350 pycom13g17370 pycom13g17400 pycom13g17410 pycom16g16870
rosa_chinensis	RchiOBHm_Chr4g0387791 RchiOBHm_Chr4g0387801 RchiOBHm_Chr6g0286501 RchiOBHm_Chr6g0286511 RchiOBHm_Chr6g0286521 RchiOBHm_Chr6g0286531 RchiOBHm_Chr7g0189141
rosa_laevigata	RLG00000004629 RLG00000010094 RLG00000010095 RLG00000012561 RLG00000012563 RLG00000012564
rosa_multiflora	Rmu_co8365229.1_g000001 Rmu_sc0004628.1_g000001 Rmu_sc0004628.1_g000002 Rmu_sc0004816.1_g000003 Rmu_sc0004816.1_g000004 Rmu_sc0004816.1_g000005 Rmu_sc0004816.1_g000010 Rmu_sc0008916.1_g000002 Rmu_sc0013958.1_g000002
rosa_roxburghii	Rroxscaffold_3G00265750 Rroxscaffold_5G00334410 Rroxscaffold_5G00334420 Rroxscaffold_7G00182230 Rroxscaffold_7G00182240 Rroxscaffold_7G00182250 Rroxscaffold_7G00182270
rosa_rugosa	Rorug03G0313400 Rorug03G0313600 Rorug06G0180400 Rorug06G0180500 Rorug06G0180600 Rorug06G0496200
rosa_samantha	Rh4AG018400 Rh4AG018500 Rh4BG013400 Rh4BG013500 Rh4CG019600 Rh4CG019700 Rh4DG014200 Rh4DG014300 Rh6AG292700 Rh6AG292800 Rh6AG292900 Rh6AG293300 Rh6AG293400 Rh6AG293500 Rh6BG296200 Rh6BG296300 Rh6BG296500 Rh6BG296600 Rh6BG296700 Rh6BG296800 Rh6BG296900 Rh6CG296800 Rh6CG297000 Rh6CG297100 Rh6CG297200 Rh6DG288700 Rh6DG288800 Rh6DG289000 Rh6DG289100 Rh7AG101000 Rh7BG103600 Rh7CG105000 Rh7CG457500 Rh7DG102900
rosa_wichuraiana	Rw4G001210 Rw6G025230 Rw6G025240 Rw6G025250 Rw6G025260 Rw6G025270 Rw6G025540 Rw7G008720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	951, 1065
AatII	GACGTC	1 cut(s)	269
AccBSI	CCGCTC	3 cut(s)	47, 647, 1551
AccII	CGCG	1 cut(s)	203
AciI	CCGC	9 cut(s)	45, 56, 209, 308, 404, 647, 678, 1532, 1551
AclWI	GGATC	6 cut(s)	127, 389, 402, 470, 483, 895
AcoI	YGGCCR	3 cut(s)	42, 679, 787
AcsI	RAATTY	1 cut(s)	276
AcuI	CTGAAG	3 cut(s)	359, 1295, 1412
AcyI	GRCGYC	1 cut(s)	266
AfaI	GTAC	3 cut(s)	804, 1023, 1146
AfiI	CCNNNNNNNGG	4 cut(s)	472, 535, 990, 1210
AgsI	TTSAA	4 cut(s)	415, 740, 776, 1424
AjnI	CCWGG	2 cut(s)	326, 989
AleI	CACNNNNGTG	1 cut(s)	789
AluBI	AGCT	6 cut(s)	239, 839, 1199, 1279, 1511, 1538
AluI	AGCT	6 cut(s)	239, 839, 1199, 1279, 1511, 1538
Alw21I	GWGCWC	1 cut(s)	1467
Alw26I	GTCTC	3 cut(s)	328, 604, 738
AlwI	GGATC	6 cut(s)	127, 389, 402, 470, 483, 895
AoxI	GGCC	8 cut(s)	42, 50, 324, 459, 679, 787, 1282, 1451
ApeKI	GCWGC	1 cut(s)	386
ApoI	RAATTY	1 cut(s)	276
Asp700I	GAANNNNTTC	2 cut(s)	347, 576
AspLEI	GCGC	2 cut(s)	203, 251
AspS9I	GGNCC	1 cut(s)	1451
AsuHPI	GGTGA	5 cut(s)	226, 719, 1250, 1558, 1565
AsuII	TTCGAA	1 cut(s)	1009
BaeGI	GKGCMC	1 cut(s)	786
BamHI	GGATCC	2 cut(s)	394, 475
BbsI	GAAGAC	2 cut(s)	266, 874
Bbv12I	GWGCWC	1 cut(s)	1467
BbvI	GCAGC	1 cut(s)	373
BccI	CCATC	5 cut(s)	704, 992, 1208, 1337, 1343
BceAI	ACGGC	2 cut(s)	774, 802
BciT130I	CCWGG	2 cut(s)	328, 991
BciVI	GTATCC	1 cut(s)	439
BcoDI	GTCTC	3 cut(s)	328, 604, 738
BfaI	CTAG	2 cut(s)	450, 1280
BfmI	CTRYAG	2 cut(s)	358, 905
BfuI	GTATCC	1 cut(s)	439
BglI	GCCNNNNNGGC	1 cut(s)	155
BisI	GCNGC	3 cut(s)	45, 387, 679
BlsI	GCNGC	3 cut(s)	46, 388, 680
Bme1390I	CCNGG	2 cut(s)	328, 991
BmgT120I	GGNCC	1 cut(s)	1451
BmiI	GGNNCC	3 cut(s)	396, 477, 798
BmrFI	CCNGG	2 cut(s)	328, 991
BmsI	GCATC	4 cut(s)	280, 1030, 1114, 1537
BpiI	GAAGAC	2 cut(s)	266, 874
BplI	GAGNNNNNCTC	2 cut(s)	73, 105
BpmI	CTGGAG	2 cut(s)	200, 225
Bpu14I	TTCGAA	1 cut(s)	1009
BpuEI	CTTGAG	2 cut(s)	606, 1078
BsaBI	GATNNNNATC	2 cut(s)	1086, 1319
BsaHI	GRCGYC	1 cut(s)	266
BsaI	GGTCTC	1 cut(s)	604
BsaJI	CCNNGG	4 cut(s)	327, 529, 989, 990
BsaXI	ACNNNNNCTCC	2 cut(s)	706, 736
Bsc4I	CCNNNNNNNGG	4 cut(s)	472, 535, 990, 1210
Bse118I	RCCGGY	3 cut(s)	73, 211, 370
Bse1I	ACTGG	2 cut(s)	479, 1300
Bse8I	GATNNNNATC	2 cut(s)	1086, 1319
BseBI	CCWGG	2 cut(s)	328, 991
BseDI	CCNNGG	4 cut(s)	327, 529, 989, 990
BseGI	GGATG	8 cut(s)	676, 984, 1219, 1231, 1237, 1249, 1267, 1528
BseJI	GATNNNNATC	2 cut(s)	1086, 1319
BseLI	CCNNNNNNNGG	4 cut(s)	472, 535, 990, 1210
BseMII	CTCAG	1 cut(s)	83
BseNI	ACTGG	2 cut(s)	479, 1300
BseRI	GAGGAG	3 cut(s)	50, 932, 1013
BseSI	GKGCMC	1 cut(s)	786
BseX3I	CGGCCG	1 cut(s)	787
BseXI	GCAGC	1 cut(s)	373
BseYI	CCCAGC	1 cut(s)	1140
BsgI	GTGCAG	1 cut(s)	506
Bsh1236I	CGCG	1 cut(s)	203
Bsh1285I	CGRYCG	1 cut(s)	790
BshFI	GGCC	8 cut(s)	44, 52, 326, 461, 681, 789, 1284, 1453
BsiEI	CGRYCG	1 cut(s)	790
BsiHKAI	GWGCWC	1 cut(s)	1467
BsiSI	CCGG	3 cut(s)	74, 212, 371
BslI	CCNNNNNNNGG	4 cut(s)	472, 535, 990, 1210
BsmAI	GTCTC	3 cut(s)	328, 604, 738
BsmBI	CGTCTC	1 cut(s)	738
BsmI	GAATGC	2 cut(s)	966, 1105
BsnI	GGCC	8 cut(s)	44, 52, 326, 461, 681, 789, 1284, 1453
Bso31I	GGTCTC	1 cut(s)	604
Bsp119I	TTCGAA	1 cut(s)	1009
Bsp1286I	GDGCHC	2 cut(s)	786, 1467
Bsp143I	GATC	5 cut(s)	119, 394, 475, 900, 1081
BspACI	CCGC	9 cut(s)	45, 56, 209, 308, 404, 647, 678, 1532, 1551
BspANI	GGCC	8 cut(s)	44, 52, 326, 461, 681, 789, 1284, 1453
BspCNI	CTCAG	1 cut(s)	84
BspFNI	CGCG	1 cut(s)	203
BspHI	TCATGA	1 cut(s)	468
BspLI	GGNNCC	3 cut(s)	396, 477, 798
BspPI	GGATC	6 cut(s)	127, 389, 402, 470, 483, 895
BspT104I	TTCGAA	1 cut(s)	1009
BspTNI	GGTCTC	1 cut(s)	604
BsrBI	CCGCTC	3 cut(s)	47, 647, 1551
BsrFI	RCCGGY	3 cut(s)	73, 211, 370
BsrI	ACTGG	2 cut(s)	479, 1300
BssAI	RCCGGY	3 cut(s)	73, 211, 370
BssECI	CCNNGG	4 cut(s)	327, 529, 989, 990
BssMI	GATC	5 cut(s)	119, 394, 475, 900, 1081
BssNI	GRCGYC	1 cut(s)	266
BssT1I	CCWWGG	1 cut(s)	529
Bst2UI	CCWGG	2 cut(s)	328, 991
Bst4CI	ACNGT	1 cut(s)	631
Bst6I	CTCTTC	3 cut(s)	15, 315, 750
BstACI	GRCGYC	1 cut(s)	266
BstBI	TTCGAA	1 cut(s)	1009
BstC8I	GCNNGC	5 cut(s)	75, 368, 463, 1513, 1536
BstDEI	CTNAG	2 cut(s)	92, 594
BstENI	CCTNNNNNAGG	1 cut(s)	470
BstF5I	GGATG	8 cut(s)	676, 984, 1219, 1231, 1237, 1249, 1267, 1528
BstFNI	CGCG	1 cut(s)	203
BstHHI	GCGC	2 cut(s)	203, 251
BstKTI	GATC	5 cut(s)	122, 397, 478, 903, 1084
BstMAI	GTCTC	3 cut(s)	328, 604, 738
BstMBI	GATC	5 cut(s)	119, 394, 475, 900, 1081
BstMCI	CGRYCG	1 cut(s)	790
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 155, 383, 462, 653, 1591
BstNI	CCWGG	2 cut(s)	328, 991
BstSCI	CCNGG	2 cut(s)	326, 989
BstSFI	CTRYAG	2 cut(s)	358, 905
BstSLI	GKGCMC	1 cut(s)	786
BstUI	CGCG	1 cut(s)	203
BstV1I	GCAGC	1 cut(s)	373
BstV2I	GAAGAC	2 cut(s)	266, 874
BstX2I	RGATCY	3 cut(s)	119, 394, 475
BstYI	RGATCY	3 cut(s)	119, 394, 475
BstZI	CGGCCG	1 cut(s)	787
BsuI	GTATCC	1 cut(s)	439
BsuRI	GGCC	8 cut(s)	44, 52, 326, 461, 681, 789, 1284, 1453
BtsCI	GGATG	8 cut(s)	676, 984, 1219, 1231, 1237, 1249, 1267, 1528
BtsI	GCAGTG	1 cut(s)	1523
BtsIMutI	CAGTG	1 cut(s)	1523
Cac8I	GCNNGC	5 cut(s)	75, 368, 463, 1513, 1536
CciI	TCATGA	1 cut(s)	468
CfoI	GCGC	2 cut(s)	203, 251
Cfr10I	RCCGGY	3 cut(s)	73, 211, 370
Cfr13I	GGNCC	1 cut(s)	1451
CseI	GACGC	1 cut(s)	848
Csp6I	GTAC	3 cut(s)	803, 1022, 1145
CviAII	CATG	6 cut(s)	469, 683, 854, 929, 1256, 1373
CviQI	GTAC	3 cut(s)	803, 1022, 1145
DdeI	CTNAG	2 cut(s)	92, 594
DpnI	GATC	5 cut(s)	121, 396, 477, 902, 1083
DpnII	GATC	5 cut(s)	119, 394, 475, 900, 1081
EaeI	YGGCCR	3 cut(s)	42, 679, 787
EagI	CGGCCG	1 cut(s)	787
Eam1104I	CTCTTC	3 cut(s)	15, 315, 750
EarI	CTCTTC	3 cut(s)	15, 315, 750
EciI	GGCGGA	2 cut(s)	45, 419
EclXI	CGGCCG	1 cut(s)	787
Eco130I	CCWWGG	1 cut(s)	529
Eco147I	AGGCCT	2 cut(s)	326, 1284
Eco31I	GGTCTC	1 cut(s)	604
Eco32I	GATATC	1 cut(s)	1072
Eco52I	CGGCCG	1 cut(s)	787
Eco57I	CTGAAG	3 cut(s)	359, 1295, 1412
EcoNI	CCTNNNNNAGG	1 cut(s)	470
EcoO109I	RGGNCCY	1 cut(s)	1451
EcoRII	CCWGG	2 cut(s)	326, 989
EcoRV	GATATC	1 cut(s)	1072
EcoT14I	CCWWGG	1 cut(s)	529
ErhI	CCWWGG	1 cut(s)	529
Esp3I	CGTCTC	1 cut(s)	738
FaeI	CATG	6 cut(s)	472, 686, 857, 932, 1259, 1376
FalI	AAGNNNNNCTT	4 cut(s)	332, 364, 564, 596
FatI	CATG	6 cut(s)	468, 682, 853, 928, 1255, 1372
FauI	CCCGC	1 cut(s)	640
FauNDI	CATATG	1 cut(s)	604
Fnu4HI	GCNGC	3 cut(s)	45, 387, 679
FokI	GGATG	8 cut(s)	683, 971, 1226, 1238, 1244, 1256, 1274, 1515
Fsp4HI	GCNGC	3 cut(s)	45, 387, 679
FspBI	CTAG	2 cut(s)	450, 1280
GlaI	GCGC	2 cut(s)	202, 250
GluI	GCNGC	3 cut(s)	45, 387, 679
GsaI	CCCAGC	1 cut(s)	1144
GsuI	CTGGAG	2 cut(s)	200, 225
HaeIII	GGCC	8 cut(s)	44, 52, 326, 461, 681, 789, 1284, 1453
HapII	CCGG	3 cut(s)	74, 212, 371
HgaI	GACGC	1 cut(s)	848
HhaI	GCGC	2 cut(s)	203, 251
Hin1I	GRCGYC	1 cut(s)	266
Hin1II	CATG	6 cut(s)	472, 686, 857, 932, 1259, 1376
Hin6I	GCGC	2 cut(s)	201, 249
HinP1I	GCGC	2 cut(s)	201, 249
HinfI	GANTC	7 cut(s)	88, 98, 287, 299, 379, 608, 1315
HpaII	CCGG	3 cut(s)	74, 212, 371
HphI	GGTGA	5 cut(s)	226, 719, 1250, 1558, 1565
Hpy166II	GTNNAC	1 cut(s)	355
Hpy188I	TCNGA	5 cut(s)	93, 843, 897, 1314, 1567
Hpy188III	TCNNGA	5 cut(s)	242, 469, 536, 623, 863
Hpy8I	GTNNAC	1 cut(s)	355
Hpy99I	CGWCG	6 cut(s)	73, 82, 236, 268, 271, 1343
HpyAV	CCTTC	8 cut(s)	69, 110, 289, 358, 466, 566, 734, 770
HpyCH4III	ACNGT	1 cut(s)	631
HpyCH4IV	ACGT	2 cut(s)	266, 805
HpyCH4V	TGCA	8 cut(s)	125, 523, 642, 946, 1043, 1127, 1255, 1528
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 155, 383, 462, 653, 1591
HpyF3I	CTNAG	2 cut(s)	92, 594
HpySE526I	ACGT	2 cut(s)	266, 805
Hsp92I	GRCGYC	1 cut(s)	266
Hsp92II	CATG	6 cut(s)	472, 686, 857, 932, 1259, 1376
HspAI	GCGC	2 cut(s)	201, 249
KroI	GCCGGC	1 cut(s)	73
KroNI	GCCGGC	1 cut(s)	75
Kzo9I	GATC	5 cut(s)	119, 394, 475, 900, 1081
LmnI	GCTCC	3 cut(s)	70, 244, 1276
Lsp1109I	GCAGC	1 cut(s)	373
LweI	GCATC	4 cut(s)	280, 1030, 1114, 1537
MaeI	CTAG	2 cut(s)	450, 1280
MaeII	ACGT	2 cut(s)	266, 805
MaeIII	GTNAC	3 cut(s)	95, 551, 1192
MalI	GATC	5 cut(s)	121, 396, 477, 902, 1083
MbiI	CCGCTC	3 cut(s)	47, 647, 1551
MboI	GATC	5 cut(s)	119, 394, 475, 900, 1081
MflI	RGATCY	3 cut(s)	119, 394, 475
MhlI	GDGCHC	2 cut(s)	786, 1467
MluCI	AATT	8 cut(s)	152, 276, 415, 663, 887, 954, 1050, 1383
MlyI	GAGTC	2 cut(s)	82, 92
MmeI	TCCRAC	1 cut(s)	1357
MreI	CGCCGGCG	1 cut(s)	73
MroNI	GCCGGC	1 cut(s)	73
MroXI	GAANNNNTTC	2 cut(s)	347, 576
MseI	TTAA	2 cut(s)	1458, 1482
MslI	CAYNNNNRTG	4 cut(s)	789, 933, 1113, 1260
MspI	CCGG	3 cut(s)	74, 212, 371
MspR9I	CCNGG	2 cut(s)	328, 991
Mva1269I	GAATGC	2 cut(s)	966, 1105
MvaI	CCWGG	2 cut(s)	328, 991
MvnI	CGCG	1 cut(s)	203
MwoI	GCNNNNNNNGC	6 cut(s)	83, 155, 383, 462, 653, 1591
NaeI	GCCGGC	1 cut(s)	75
NdeI	CATATG	1 cut(s)	604
NdeII	GATC	5 cut(s)	119, 394, 475, 900, 1081
NgoMIV	GCCGGC	1 cut(s)	73
NlaIII	CATG	6 cut(s)	472, 686, 857, 932, 1259, 1376
NlaIV	GGNNCC	3 cut(s)	396, 477, 798
NmeAIII	GCCGAG	1 cut(s)	28
NmuCI	GTSAC	2 cut(s)	95, 1192
NspV	TTCGAA	1 cut(s)	1009
OliI	CACNNNNGTG	1 cut(s)	789
PagI	TCATGA	1 cut(s)	468
PasI	CCCWGGG	1 cut(s)	990
PceI	AGGCCT	2 cut(s)	326, 1284
PcsI	WCGNNNNNNNCGW	2 cut(s)	77, 1015
PctI	GAATGC	2 cut(s)	966, 1105
PdiI	GCCGGC	1 cut(s)	75
PdmI	GAANNNNTTC	2 cut(s)	347, 576
PfeI	GAWTC	5 cut(s)	287, 299, 379, 608, 1315
PflFI	GACNNNGTC	1 cut(s)	265
PkrI	GCNGC	3 cut(s)	46, 388, 680
PleI	GAGTC	2 cut(s)	82, 92
PpsI	GAGTC	2 cut(s)	82, 92
PsiI	TTATAA	2 cut(s)	951, 1065
Psp6I	CCWGG	2 cut(s)	326, 989
PspFI	CCCAGC	1 cut(s)	1140
PspGI	CCWGG	2 cut(s)	326, 989
PspN4I	GGNNCC	3 cut(s)	396, 477, 798
PspPI	GGNCC	1 cut(s)	1451
PsuI	RGATCY	3 cut(s)	119, 394, 475
PsyI	GACNNNGTC	1 cut(s)	265
RsaI	GTAC	3 cut(s)	804, 1023, 1146
RsaNI	GTAC	3 cut(s)	803, 1022, 1145
RseI	CAYNNNNRTG	4 cut(s)	789, 933, 1113, 1260
SaqAI	TTAA	2 cut(s)	1458, 1482
SatI	GCNGC	3 cut(s)	45, 387, 679
Sau3AI	GATC	5 cut(s)	119, 394, 475, 900, 1081
Sau96I	GGNCC	1 cut(s)	1451
SchI	GAGTC	2 cut(s)	82, 92
ScrFI	CCNGG	2 cut(s)	328, 991
SduI	GDGCHC	2 cut(s)	786, 1467
SfaNI	GCATC	4 cut(s)	280, 1030, 1114, 1537
SfcI	CTRYAG	2 cut(s)	358, 905
SfuI	TTCGAA	1 cut(s)	1009
SgrAI	CRCCGGYG	2 cut(s)	73, 211
SmiMI	CAYNNNNRTG	4 cut(s)	789, 933, 1113, 1260
SmlI	CTYRAG	2 cut(s)	621, 1093
SmoI	CTYRAG	2 cut(s)	621, 1093
Sse9I	AATT	8 cut(s)	152, 276, 415, 663, 887, 954, 1050, 1383
SseBI	AGGCCT	2 cut(s)	326, 1284
SsiI	CCGC	9 cut(s)	45, 56, 209, 308, 404, 647, 678, 1532, 1551
SspI	AATATT	4 cut(s)	1014, 1033, 1559, 1576
SspMI	CTAG	2 cut(s)	450, 1280
StuI	AGGCCT	2 cut(s)	326, 1284
StyD4I	CCNGG	2 cut(s)	326, 989
StyI	CCWWGG	1 cut(s)	529
TaaI	ACNGT	1 cut(s)	631
TaiI	ACGT	2 cut(s)	269, 808
TaqI	TCGA	4 cut(s)	5, 1009, 1018, 1338
TasI	AATT	8 cut(s)	152, 276, 415, 663, 887, 954, 1050, 1383
TatI	WGTACW	1 cut(s)	1021
TauI	GCSGC	2 cut(s)	47, 681
TfiI	GAWTC	5 cut(s)	287, 299, 379, 608, 1315
Tru1I	TTAA	2 cut(s)	1458, 1482
Tru9I	TTAA	2 cut(s)	1458, 1482
TscAI	CASTG	1 cut(s)	1530
TseFI	GTSAC	2 cut(s)	95, 1192
TseI	GCWGC	1 cut(s)	386
Tsp45I	GTSAC	2 cut(s)	95, 1192
TspDTI	ATGAA	7 cut(s)	159, 485, 702, 849, 945, 984, 1361
TspGWI	ACGGA	3 cut(s)	57, 407, 421
TspRI	CASTG	1 cut(s)	1530
Tth111I	GACNNNGTC	1 cut(s)	265
XagI	CCTNNNNNAGG	1 cut(s)	470
XapI	RAATTY	1 cut(s)	276
XmnI	GAANNNNTTC	2 cut(s)	347, 576
XspI	CTAG	2 cut(s)	450, 1280
ZraI	GACGTC	1 cut(s)	267

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.