Prupe.1G332200_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0001116
Physical Location & Seq
Forward (+)
31449112 .. 31450673
1562 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G332200.1

Sequence Viewer

Length: 1146 bp
ATGACAACTGAAACACAGGCACCCTACCCGACCCACAAAACCATGGCGGCCAACACCACCGTGATCGGCCAACAGGATTATGATAGAGCTCAACAAGTCAAGCAATTCGATCAATCCAAGCTCGGAGTCAAAGGCCTCGTTGACTCCGGCCTCACCTCCATCCCCCGTTTCTTTATCCACCCGCCCGAAACACTACCCGACCTCCGACCCCATACTAAACCCCAAACCCAGCAACAACCGATCCCCACCATCGACCTCTCCGATCTTCACACCCATCGCCGCTCATCCATCGTCCAACAAATCAGCCGCGCCTGCCGAACATTCGGTTTCTTCCAGATCACCAACCACGGCATCCCGTCTGCGGTTCTGGACCGTACGATTGCCAGCATCAAGGCCTTCCACGAGCAGCCGACGGAGGTCAAAGCGCCGGTCTACAGCAGAGAGATGGGCACGGGCGTATCTTATCTGTCCAACGTCGACCTGTACAGCTCAAAAGCCGCCAGCTGGAGGGACACGCTTCAAGTAAGGCTGGGACCCATTCCGGCGGTTCCTGAAGAAGTGCCGGAGATTTGTCGGGACGAGATTGTTGGGTGGGACGGGGAGATCCTACGGCTGGGAGAGGCGCTGATGGAGTTGGTGAGTGAAGGGTTGGGATTGAGCGCGGGGAGGTTGAAGGAGATGACGTGTCTGGGAGGGAGGGTGATGGTGGGCCATTACTACCCGTACTGCCCCCAGCCTGATCTGACGGTGGGGCTTACATCTCATTCTGACCCGGGAGTGTTGACCTTGCTGCTTCAGGACCACATGGGTGGGTTGCAGGTTAAGCACGGTGAGGGTTGGGTGGACGTGAAACCCGTCCCAGGCGCTCTTGTTATCAACGTTGGAGATTTACTTCAGATTATGTCCAACGGGGAATACAAGAGTGTAGATCATCGGGTGTTGGCAAACTCAAACCGCGAGCCACGGGTGTCAACTGCAGTGTTTTTCAATCCAAGCAATAGAGAGGGCACCTATGGTCCATTGCCAGAGCTGGTCTCGCCCGAGAAACCGCCACTTTACCGAGAGTTCACGTTTTCAGAGTTCATGCAAAGGTTCTTCAAGAAAGGATTGGATGGCAAAGCTTTGGTCAATCACTTTGAGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

382

Amino Acids

42.31

Weight (kDa)

6.23

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 808
AccB1I GGYRCC 2 cut(s) 19, 1007
AccBSI CCGCTC 1 cut(s) 282
AccI GTMKAC 2 cut(s) 432, 477
AccII CGCG 3 cut(s) 309, 662, 957
AclI AACGTT 1 cut(s) 879
AclWI GGATC 2 cut(s) 235, 598
AcoI YGGCCR 2 cut(s) 48, 67
AcuI CTGAAG 3 cut(s) 573, 779, 878
AfaI GTAC 3 cut(s) 376, 485, 725
AfiI CCNNNNNNNGG 5 cut(s) 361, 504, 507, 613, 860
AflIII ACRYGT 1 cut(s) 683
AgsI TTSAA 4 cut(s) 521, 673, 988, 1099
AjiI CACGTC 2 cut(s) 684, 847
AjnI CCWGG 1 cut(s) 859
AleI CACNNNNGTG 2 cut(s) 59, 807
AluBI AGCT 7 cut(s) 89, 121, 489, 504, 1030, 1121, 1141
AluI AGCT 7 cut(s) 89, 121, 489, 504, 1030, 1121, 1141
Alw21I GWGCWC 1 cut(s) 91
Alw26I GTCTC 1 cut(s) 1039
AlwI GGATC 2 cut(s) 235, 598
Ama87I CYCGRG 2 cut(s) 772, 1040
AoxI GGCC 6 cut(s) 48, 67, 133, 148, 393, 709
ApeKI GCWGC 2 cut(s) 406, 790
ArsI GACNNNNNNTTYG 4 cut(s) 414, 446, 1110, 1142
AspLEI GCGC 5 cut(s) 311, 427, 625, 662, 866
AspS9I GGNCC 5 cut(s) 370, 533, 709, 799, 1016
AsuC2I CCSGG 2 cut(s) 773, 774
AsuHPI GGTGA 5 cut(s) 145, 331, 649, 712, 842
AvaI CYCGRG 2 cut(s) 772, 1040
AvaII GGWCC 4 cut(s) 370, 533, 799, 1016
BaeGI GKGCMC 2 cut(s) 452, 1010
BaeI ACNNNNGTAYC 2 cut(s) 441, 474
BanI GGYRCC 2 cut(s) 19, 1007
BanII GRGCYC 1 cut(s) 91
BauI CACGAG 1 cut(s) 401
Bbv12I GWGCWC 1 cut(s) 91
BbvI GCAGC 2 cut(s) 418, 777
BccI CCATC 8 cut(s) 167, 257, 282, 296, 439, 622, 697, 1106
BceAI ACGGC 2 cut(s) 364, 626
BciT130I CCWGG 1 cut(s) 861
BcnI CCSGG 2 cut(s) 773, 774
BcoDI GTCTC 1 cut(s) 1039
BfmI CTRYAG 2 cut(s) 433, 975
BfoI RGCGCY 3 cut(s) 428, 626, 867
BfuAI ACCTGC 1 cut(s) 808
BisI GCNGC 6 cut(s) 48, 280, 307, 407, 498, 791
BlsI GCNGC 6 cut(s) 49, 281, 308, 408, 499, 792
Bme1390I CCNGG 3 cut(s) 773, 774, 861
Bme18I GGWCC 4 cut(s) 370, 533, 799, 1016
BmeT110I CYCGRG 2 cut(s) 772, 1040
BmgBI CACGTC 2 cut(s) 684, 847
BmgT120I GGNCC 5 cut(s) 370, 533, 709, 799, 1016
BmiI GGNNCC 5 cut(s) 21, 534, 535, 549, 1009
BmrFI CCNGG 3 cut(s) 773, 774, 861
BmsI GCATC 2 cut(s) 360, 396
BoxI GACNNNNGTC 1 cut(s) 416
BplI GAGNNNNNCTC 2 cut(s) 1019, 1051
BpmI CTGGAG 1 cut(s) 526
BpuMI CCSGG 2 cut(s) 773, 774
BsaI GGTCTC 1 cut(s) 1039
BsaJI CCNNGG 5 cut(s) 42, 346, 772, 859, 962
BsaXI ACNNNNNCTCC 6 cut(s) 186, 216, 668, 684, 698, 714
Bsc4I CCNNNNNNNGG 5 cut(s) 361, 504, 507, 613, 860
Bse118I RCCGGY 1 cut(s) 427
Bse3DI GCAATG 1 cut(s) 1019
BseBI CCWGG 1 cut(s) 861
BseDI CCNNGG 5 cut(s) 42, 346, 772, 859, 962
BseGI GGATG 4 cut(s) 159, 284, 351, 1117
BseLI CCNNNNNNNGG 5 cut(s) 361, 504, 507, 613, 860
BseMI GCAATG 1 cut(s) 1019
BseSI GKGCMC 2 cut(s) 452, 1010
BseXI GCAGC 2 cut(s) 418, 777
BseYI CCCAGC 4 cut(s) 228, 529, 613, 732
Bsh1236I CGCG 3 cut(s) 309, 662, 957
BshFI GGCC 6 cut(s) 50, 69, 135, 150, 395, 711
BshNI GGYRCC 2 cut(s) 19, 1007
BsiHKAI GWGCWC 1 cut(s) 91
BsiHKCI CYCGRG 2 cut(s) 772, 1040
BsiSI CCGG 5 cut(s) 147, 428, 542, 563, 773
BsiWI CGTACG 1 cut(s) 374
BslFI GGGAC 5 cut(s) 524, 546, 590, 608, 842
BslI CCNNNNNNNGG 5 cut(s) 361, 504, 507, 613, 860
BsmAI GTCTC 1 cut(s) 1039
BsmFI GGGAC 5 cut(s) 524, 546, 590, 608, 842
BsnI GGCC 6 cut(s) 50, 69, 135, 150, 395, 711
Bso31I GGTCTC 1 cut(s) 1039
BsoBI CYCGRG 2 cut(s) 772, 1040
Bsp1286I GDGCHC 3 cut(s) 91, 452, 1010
Bsp1407I TGTACA 1 cut(s) 483
Bsp143I GATC 8 cut(s) 63, 109, 240, 262, 336, 603, 739, 928
Bsp19I CCATGG 1 cut(s) 42
BspANI GGCC 6 cut(s) 50, 69, 135, 150, 395, 711
BspFNI CGCG 3 cut(s) 309, 662, 957
BspLI GGNNCC 5 cut(s) 21, 534, 535, 549, 1009
BspMAI CTGCAG 1 cut(s) 979
BspMI ACCTGC 1 cut(s) 808
BspPI GGATC 2 cut(s) 235, 598
BspT107I GGYRCC 2 cut(s) 19, 1007
BspTNI GGTCTC 1 cut(s) 1039
BsrBI CCGCTC 1 cut(s) 282
BsrDI GCAATG 1 cut(s) 1019
BsrFI RCCGGY 1 cut(s) 427
BsrGI TGTACA 1 cut(s) 483
BssAI RCCGGY 1 cut(s) 427
BssECI CCNNGG 5 cut(s) 42, 346, 772, 859, 962
BssMI GATC 8 cut(s) 63, 109, 240, 262, 336, 603, 739, 928
BssSI CACGAG 1 cut(s) 401
BssT1I CCWWGG 1 cut(s) 42
Bst2BI CACGAG 1 cut(s) 401
Bst2UI CCWGG 1 cut(s) 861
Bst4CI ACNGT 4 cut(s) 61, 374, 748, 830
BstAUI TGTACA 1 cut(s) 483
BstC8I GCNNGC 4 cut(s) 313, 385, 502, 959
BstDSI CCRYGG 3 cut(s) 42, 346, 962
BstF5I GGATG 4 cut(s) 159, 284, 351, 1117
BstFNI CGCG 3 cut(s) 309, 662, 957
BstH2I RGCGCY 3 cut(s) 428, 626, 867
BstHHI GCGC 5 cut(s) 311, 427, 625, 662, 866
BstKTI GATC 8 cut(s) 66, 112, 243, 265, 339, 606, 742, 931
BstMAI GTCTC 1 cut(s) 1039
BstMBI GATC 8 cut(s) 63, 109, 240, 262, 336, 603, 739, 928
BstMWI GCNNNNNNNGC 3 cut(s) 312, 823, 1036
BstNI CCWGG 1 cut(s) 861
BstPAI GACNNNNGTC 1 cut(s) 416
BstSCI CCNGG 3 cut(s) 771, 772, 859
BstSFI CTRYAG 2 cut(s) 433, 975
BstSLI GKGCMC 2 cut(s) 452, 1010
BstUI CGCG 3 cut(s) 309, 662, 957
BstV1I GCAGC 2 cut(s) 418, 777
BstX2I RGATCY 1 cut(s) 603
BstXI CCANNNNNNTGG 1 cut(s) 809
BstYI RGATCY 1 cut(s) 603
BsuRI GGCC 6 cut(s) 50, 69, 135, 150, 395, 711
BtgI CCRYGG 3 cut(s) 42, 346, 962
BtgZI GCGATG 1 cut(s) 260
BtrI CACGTC 2 cut(s) 684, 847
BtsCI GGATG 4 cut(s) 159, 284, 351, 1117
BtsI GCAGTG 1 cut(s) 984
BtsIMutI CAGTG 1 cut(s) 984
BveI ACCTGC 1 cut(s) 808
Cac8I GCNNGC 4 cut(s) 313, 385, 502, 959
CfoI GCGC 5 cut(s) 311, 427, 625, 662, 866
Cfr10I RCCGGY 1 cut(s) 427
Cfr13I GGNCC 5 cut(s) 370, 533, 709, 799, 1016
Cfr9I CCCGGG 1 cut(s) 772
Csp6I GTAC 3 cut(s) 375, 484, 724
CviAII CATG 3 cut(s) 43, 805, 1084
CviQI GTAC 3 cut(s) 375, 484, 724
DpnI GATC 8 cut(s) 65, 111, 242, 264, 338, 605, 741, 930
DpnII GATC 8 cut(s) 63, 109, 240, 262, 336, 603, 739, 928
EaeI YGGCCR 2 cut(s) 48, 67
Ecl136II GAGCTC 1 cut(s) 89
Eco130I CCWWGG 1 cut(s) 42
Eco147I AGGCCT 2 cut(s) 135, 395
Eco24I GRGCYC 1 cut(s) 91
Eco31I GGTCTC 1 cut(s) 1039
Eco47I GGWCC 4 cut(s) 370, 533, 799, 1016
Eco53kI GAGCTC 1 cut(s) 89
Eco57I CTGAAG 3 cut(s) 573, 779, 878
Eco88I CYCGRG 2 cut(s) 772, 1040
EcoICRI GAGCTC 1 cut(s) 89
EcoO109I RGGNCCY 1 cut(s) 533
EcoRII CCWGG 1 cut(s) 859
EcoT14I CCWWGG 1 cut(s) 42
EcoT38I GRGCYC 1 cut(s) 91
ErhI CCWWGG 1 cut(s) 42
FaeI CATG 3 cut(s) 46, 808, 1087
FaiI YATR 7 cut(s) 44, 81, 213, 806, 902, 1014, 1085
FaqI GGGAC 5 cut(s) 524, 546, 590, 608, 842
FatI CATG 3 cut(s) 42, 804, 1083
FauI CCCGC 2 cut(s) 189, 655
FblI GTMKAC 2 cut(s) 432, 477
Fnu4HI GCNGC 6 cut(s) 48, 280, 307, 407, 498, 791
FokI GGATG 4 cut(s) 146, 271, 338, 1124
FriOI GRGCYC 1 cut(s) 91
Fsp4HI GCNGC 6 cut(s) 48, 280, 307, 407, 498, 791
GlaI GCGC 5 cut(s) 310, 426, 624, 661, 865
GluI GCNGC 6 cut(s) 48, 280, 307, 407, 498, 791
GsaI CCCAGC 4 cut(s) 232, 533, 617, 736
GsuI CTGGAG 1 cut(s) 526
HaeII RGCGCY 3 cut(s) 428, 626, 867
HaeIII GGCC 6 cut(s) 50, 69, 135, 150, 395, 711
HapII CCGG 5 cut(s) 147, 428, 542, 563, 773
HhaI GCGC 5 cut(s) 311, 427, 625, 662, 866
Hin1II CATG 3 cut(s) 46, 808, 1087
Hin6I GCGC 5 cut(s) 309, 425, 623, 660, 864
HinP1I GCGC 5 cut(s) 309, 425, 623, 660, 864
HincII GTYRAC 4 cut(s) 142, 478, 783, 972
HindII GTYRAC 4 cut(s) 142, 478, 783, 972
HindIII AAGCTT 1 cut(s) 1119
HinfI GANTC 2 cut(s) 126, 143
HpaII CCGG 5 cut(s) 147, 428, 542, 563, 773
HphI GGTGA 5 cut(s) 145, 331, 649, 712, 842
Hpy166II GTNNAC 7 cut(s) 142, 433, 478, 783, 844, 972, 1068
Hpy188I TCNGA 7 cut(s) 125, 206, 262, 744, 769, 897, 1078
Hpy188III TCNNGA 6 cut(s) 334, 368, 551, 575, 797, 1099
Hpy8I GTNNAC 7 cut(s) 142, 433, 478, 783, 844, 972, 1068
Hpy99I CGWCG 2 cut(s) 415, 479
HpyAV CCTTC 3 cut(s) 406, 638, 667
HpyCH4III ACNGT 4 cut(s) 61, 374, 748, 830
HpyCH4IV ACGT 5 cut(s) 474, 683, 846, 879, 1070
HpyCH4V TGCA 3 cut(s) 817, 977, 1087
HpyF10VI GCNNNNNNNGC 3 cut(s) 312, 823, 1036
HpySE526I ACGT 5 cut(s) 474, 683, 846, 879, 1070
Hsp92II CATG 3 cut(s) 46, 808, 1087
HspAI GCGC 5 cut(s) 309, 425, 623, 660, 864
KflI GGGWCCC 1 cut(s) 533
Kzo9I GATC 8 cut(s) 63, 109, 240, 262, 336, 603, 739, 928
Lsp1109I GCAGC 2 cut(s) 418, 777
LweI GCATC 2 cut(s) 360, 396
MaeII ACGT 5 cut(s) 474, 683, 846, 879, 1070
MalI GATC 8 cut(s) 65, 111, 242, 264, 338, 605, 741, 930
MbiI CCGCTC 1 cut(s) 282
MboI GATC 8 cut(s) 63, 109, 240, 262, 336, 603, 739, 928
MboII GAAGA 4 cut(s) 257, 322, 566, 1087
MflI RGATCY 1 cut(s) 603
MhlI GDGCHC 3 cut(s) 91, 452, 1010
MluCI AATT 1 cut(s) 104
MlyI GAGTC 2 cut(s) 135, 137
MmeI TCCRAC 5 cut(s) 229, 319, 495, 862, 930
MseI TTAA 1 cut(s) 822
MslI CAYNNNNRTG 2 cut(s) 59, 807
MspA1I CMGCKG 1 cut(s) 504
MspI CCGG 5 cut(s) 147, 428, 542, 563, 773
MspR9I CCNGG 3 cut(s) 773, 774, 861
MvaI CCWGG 1 cut(s) 861
MvnI CGCG 3 cut(s) 309, 662, 957
MwoI GCNNNNNNNGC 3 cut(s) 312, 823, 1036
NciI CCSGG 2 cut(s) 773, 774
NcoI CCATGG 1 cut(s) 42
NdeII GATC 8 cut(s) 63, 109, 240, 262, 336, 603, 739, 928
NlaIII CATG 3 cut(s) 46, 808, 1087
NlaIV GGNNCC 5 cut(s) 21, 534, 535, 549, 1009
OliI CACNNNNGTG 2 cut(s) 59, 807
PceI AGGCCT 2 cut(s) 135, 395
PcsI WCGNNNNNNNCGW 2 cut(s) 258, 852
Pfl23II CGTACG 1 cut(s) 374
PkrI GCNGC 6 cut(s) 49, 281, 308, 408, 499, 792
PleI GAGTC 2 cut(s) 134, 137
PpsI GAGTC 2 cut(s) 134, 137
PpuMI RGGWCCY 1 cut(s) 533
PshAI GACNNNNGTC 1 cut(s) 416
Psp124BI GAGCTC 1 cut(s) 91
Psp1406I AACGTT 1 cut(s) 879
Psp5II RGGWCCY 1 cut(s) 533
Psp6I CCWGG 1 cut(s) 859
PspFI CCCAGC 4 cut(s) 228, 529, 613, 732
PspGI CCWGG 1 cut(s) 859
PspLI CGTACG 1 cut(s) 374
PspN4I GGNNCC 5 cut(s) 21, 534, 535, 549, 1009
PspPI GGNCC 5 cut(s) 370, 533, 709, 799, 1016
PspPPI RGGWCCY 1 cut(s) 533
PstI CTGCAG 1 cut(s) 979
PsuI RGATCY 1 cut(s) 603
PvuII CAGCTG 1 cut(s) 504
RsaI GTAC 3 cut(s) 376, 485, 725
RsaNI GTAC 3 cut(s) 375, 484, 724
RseI CAYNNNNRTG 2 cut(s) 59, 807
SacI GAGCTC 1 cut(s) 91
SalI GTCGAC 1 cut(s) 476
SaqAI TTAA 1 cut(s) 822
SatI GCNGC 6 cut(s) 48, 280, 307, 407, 498, 791
Sau3AI GATC 8 cut(s) 63, 109, 240, 262, 336, 603, 739, 928
Sau96I GGNCC 5 cut(s) 370, 533, 709, 799, 1016
SchI GAGTC 2 cut(s) 135, 137
ScrFI CCNGG 3 cut(s) 773, 774, 861
SduI GDGCHC 3 cut(s) 91, 452, 1010
SfaNI GCATC 2 cut(s) 360, 396
SfcI CTRYAG 2 cut(s) 433, 975
SinI GGWCC 4 cut(s) 370, 533, 799, 1016
SmaI CCCGGG 1 cut(s) 774
SmiMI CAYNNNNRTG 2 cut(s) 59, 807
Sse9I AATT 1 cut(s) 104
SseBI AGGCCT 2 cut(s) 135, 395
SstI GAGCTC 1 cut(s) 91
StuI AGGCCT 2 cut(s) 135, 395
StyD4I CCNGG 3 cut(s) 771, 772, 859
StyI CCWWGG 1 cut(s) 42
TaaI ACNGT 4 cut(s) 61, 374, 748, 830
TaiI ACGT 5 cut(s) 477, 686, 849, 882, 1073
TaqI TCGA 3 cut(s) 108, 252, 477
TasI AATT 1 cut(s) 104
TatI WGTACW 1 cut(s) 483
TauI GCSGC 4 cut(s) 50, 282, 309, 500
Tru1I TTAA 1 cut(s) 822
Tru9I TTAA 1 cut(s) 822
TscAI CASTG 1 cut(s) 984
TseI GCWGC 2 cut(s) 406, 790
TspDTI ATGAA 1 cut(s) 1072
TspGWI ACGGA 1 cut(s) 428
TspMI CCCGGG 1 cut(s) 772
TspRI CASTG 1 cut(s) 984
VpaK11BI GGWCC 4 cut(s) 370, 533, 799, 1016
XmaI CCCGGG 1 cut(s) 772
XmiI GTMKAC 2 cut(s) 432, 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.