pycom01g08080

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
9075031 .. 9075432
402 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g08080.1

Sequence Viewer

Length: 402 bp
ATGGAAATATCGAATATATCCAGGATATTTCAAACACTGATCTTAATTTATTTTATTGTTTTGGTTTACAATGTTTTCTTAGGTATCGTTTGGTATGCAGACGGGACGGGACGGAACGGAATGGGACGGGATGGGACGGGACAGGACGGAACAGAACGGAGCGGGAGCAAAGATGCCCTCGGATGGAAACAAGGAGGAAGAAGAAGGAGACGGAAATGTTATAATTTTGTGTTCCACGGATGTGGAACGAGTCGTTCCAGGGGGGTGAGGTGGAACGAAAATTCACCCAAAACTCGTCCCGTGGAACAGCTCGTTCCACTCGTTTTAGGCACACCAAACGTGGGACGGAACGCCTTGTCCCACTCTATTCCGTCCCGTCCCACGTACCAAACGGTACCTTAG

Protein Analysis

134

Amino Acids

14.91

Weight (kDa)

10.66

Isoelectric Point (pI)

62.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 222
Acc65I GGTACC 1 cut(s) 394
AccB1I GGYRCC 1 cut(s) 394
AccBSI CCGCTC 1 cut(s) 162
AciI CCGC 1 cut(s) 162
AcsI RAATTY 1 cut(s) 280
AfaI GTAC 2 cut(s) 386, 396
AfiI CCNNNNNNNGG 2 cut(s) 183, 341
AgsI TTSAA 1 cut(s) 32
AjnI CCWGG 2 cut(s) 20, 257
AleI CACNNNNGTG 1 cut(s) 240
AloI GAACNNNNNNTCC 2 cut(s) 341, 373
AluBI AGCT 1 cut(s) 310
AluI AGCT 1 cut(s) 310
Alw26I GTCTC 1 cut(s) 202
ApoI RAATTY 1 cut(s) 280
Asp718I GGTACC 1 cut(s) 394
AsuHPI GGTGA 2 cut(s) 276, 277
BanI GGYRCC 1 cut(s) 394
BccI CCATC 2 cut(s) 125, 177
BciT130I CCWGG 2 cut(s) 22, 259
BcoDI GTCTC 1 cut(s) 202
Bme1390I CCNGG 2 cut(s) 22, 259
BmiI GGNNCC 1 cut(s) 396
BmrFI CCNGG 2 cut(s) 22, 259
BmsI GCATC 1 cut(s) 163
BsaAI YACGTR 1 cut(s) 384
BsaJI CCNNGG 4 cut(s) 178, 235, 258, 300
Bsc4I CCNNNNNNNGG 2 cut(s) 183, 341
BseBI CCWGG 2 cut(s) 22, 259
BseDI CCNNGG 4 cut(s) 178, 235, 258, 300
BseGI GGATG 3 cut(s) 136, 188, 245
BseLI CCNNNNNNNGG 2 cut(s) 183, 341
BshNI GGYRCC 1 cut(s) 394
BslI CCNNNNNNNGG 2 cut(s) 183, 341
BsmAI GTCTC 1 cut(s) 202
BsmBI CGTCTC 1 cut(s) 202
Bsp143I GATC 1 cut(s) 39
BspACI CCGC 1 cut(s) 162
BspLI GGNNCC 1 cut(s) 396
BspT107I GGYRCC 1 cut(s) 394
BsrBI CCGCTC 1 cut(s) 162
BssECI CCNNGG 4 cut(s) 178, 235, 258, 300
BssMI GATC 1 cut(s) 39
Bst2UI CCWGG 2 cut(s) 22, 259
Bst4CI ACNGT 1 cut(s) 394
BstBAI YACGTR 1 cut(s) 384
BstDEI CTNAG 2 cut(s) 79, 399
BstDSI CCRYGG 2 cut(s) 235, 300
BstF5I GGATG 3 cut(s) 136, 188, 245
BstKTI GATC 1 cut(s) 42
BstMAI GTCTC 1 cut(s) 202
BstMBI GATC 1 cut(s) 39
BstNI CCWGG 2 cut(s) 22, 259
BstSCI CCNGG 2 cut(s) 20, 257
BstXI CCANNNNNNTGG 1 cut(s) 242
BtgI CCRYGG 2 cut(s) 235, 300
BtsCI GGATG 3 cut(s) 136, 188, 245
BtsIMutI CAGTG 1 cut(s) 35
Csp6I GTAC 2 cut(s) 385, 395
CviJI RGCY 1 cut(s) 310
CviKI_1 RGCY 1 cut(s) 310
CviQI GTAC 2 cut(s) 385, 395
DdeI CTNAG 2 cut(s) 79, 399
DpnI GATC 1 cut(s) 41
DpnII GATC 1 cut(s) 39
EcoRII CCWGG 2 cut(s) 20, 257
Esp3I CGTCTC 1 cut(s) 202
FaiI YATR 3 cut(s) 17, 96, 222
FauI CCCGC 1 cut(s) 155
FokI GGATG 3 cut(s) 143, 195, 252
HinfI GANTC 1 cut(s) 250
HphI GGTGA 2 cut(s) 276, 277
Hpy166II GTNNAC 1 cut(s) 67
Hpy188I TCNGA 1 cut(s) 182
Hpy8I GTNNAC 1 cut(s) 67
HpyAV CCTTC 1 cut(s) 198
HpyCH4III ACNGT 1 cut(s) 394
HpyCH4IV ACGT 2 cut(s) 339, 383
HpyCH4V TGCA 1 cut(s) 98
HpyF3I CTNAG 2 cut(s) 79, 399
HpySE526I ACGT 2 cut(s) 339, 383
KpnI GGTACC 1 cut(s) 398
Kzo9I GATC 1 cut(s) 39
LmnI GCTCC 2 cut(s) 159, 165
LpnPI CCDG 5 cut(s) 7, 34, 128, 244, 271
LweI GCATC 1 cut(s) 163
MaeII ACGT 2 cut(s) 339, 383
MalI GATC 1 cut(s) 41
MbiI CCGCTC 1 cut(s) 162
MboI GATC 1 cut(s) 39
MboII GAAGA 2 cut(s) 210, 213
MluCI AATT 3 cut(s) 45, 223, 280
MlyI GAGTC 1 cut(s) 259
MnlI CCTC 3 cut(s) 188, 188, 261
MseI TTAA 1 cut(s) 44
MslI CAYNNNNRTG 1 cut(s) 240
MspR9I CCNGG 2 cut(s) 22, 259
MvaI CCWGG 2 cut(s) 22, 259
NdeII GATC 1 cut(s) 39
NlaIV GGNNCC 1 cut(s) 396
OliI CACNNNNGTG 1 cut(s) 240
PcsI WCGNNNNNNNCGW 1 cut(s) 318
PfoI TCCNGGA 1 cut(s) 20
PleI GAGTC 1 cut(s) 258
PpsI GAGTC 1 cut(s) 258
Ppu21I YACGTR 1 cut(s) 384
PsiI TTATAA 1 cut(s) 222
Psp6I CCWGG 2 cut(s) 20, 257
PspGI CCWGG 2 cut(s) 20, 257
PspN4I GGNNCC 1 cut(s) 396
RsaI GTAC 2 cut(s) 386, 396
RsaNI GTAC 2 cut(s) 385, 395
RseI CAYNNNNRTG 1 cut(s) 240
SaqAI TTAA 1 cut(s) 44
Sau3AI GATC 1 cut(s) 39
SchI GAGTC 1 cut(s) 259
ScrFI CCNGG 2 cut(s) 22, 259
SetI ASST 6 cut(s) 85, 272, 312, 342, 386, 400
SfaNI GCATC 1 cut(s) 163
SmiMI CAYNNNNRTG 1 cut(s) 240
Sse9I AATT 3 cut(s) 45, 223, 280
SsiI CCGC 1 cut(s) 162
StyD4I CCNGG 2 cut(s) 20, 257
TaaI ACNGT 1 cut(s) 394
TaiI ACGT 2 cut(s) 342, 386
TaqI TCGA 1 cut(s) 11
TasI AATT 3 cut(s) 45, 223, 280
Tru1I TTAA 1 cut(s) 44
Tru9I TTAA 1 cut(s) 44
TscAI CASTG 1 cut(s) 42
TspGWI ACGGA 8 cut(s) 127, 132, 162, 172, 226, 252, 360, 361
TspRI CASTG 1 cut(s) 42
XapI RAATTY 1 cut(s) 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.